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Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q3ECQ3", "url": "https://www.uniprot.org/uniprotkb/Q3ECQ3" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3ECQ3", "url": "https://www.uniprot.org/uniprotkb/Q3ECQ3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G54215", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G54215", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q3ECQ3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 169, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q3ECQ3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q3ECQ3" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], 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"id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q3ECQ9", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q3ECQ9", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_974020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_974020", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G53815", "url": 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Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q3ECQ9", "url": "https://www.uniprot.org/uniprotkb/Q3ECQ9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { 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P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q3ECR3", "url": "https://www.uniprot.org/uniprotkb/Q3ECR3" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3ECR3", "url": "https://www.uniprot.org/uniprotkb/Q3ECR3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G53360", "name": "", "url": 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cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q3EDB5", "locus": {} } ], "crossref": [ { "id": "Q3EDB5", "url": "https://alphafold.ebi.ac.uk/entry/Q3EDB5", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G15900", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G15900", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "838160", "url": "https://www.ncbi.nlm.nih.gov/gene/838160", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q3EDB5", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q3EDB5*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "ath:AT1G15900", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15900", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "METQFHG", "url": "https://omabrowser.org/oma/group/METQFHG/", "database": "OMA", 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Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q3EDB5", "url": "https://www.uniprot.org/uniprotkb/Q3EDB5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3EDB5", "url": "https://www.uniprot.org/uniprotkb/Q3EDB5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G15900", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15900", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", 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] }, { "id": "GAGTQVM", "url": "https://omabrowser.org/oma/group/GAGTQVM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "AT1G15830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G15830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AUI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUI5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUI5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUL1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUL1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUL1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUL1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q3EDB7", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q3EDB7-1", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTGGVNVDWSIGGSMVTSGGGGCPMTISGGRLFTGGGDPVIITGGRLSTGAAGGVNVDRSKGGGRRKTGDGGGDPVVISGGENHASGGMGGTSATRGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGGCETVPPGRGGGGDKTNGRGGEGREEDNGGGRGAEGGGRGSTGEGVTDGGGRTGNKGGNGGSIKIGVGTNGITGGTGGGEAGAGMQVMQGWGGGGSGAATQVMQGCGGGDAGAITQVMQGWGGGGAGAVTQVMQGCGGGGGGGDGGGGQGTGIGGGGGGEQGTGVGGGGDTCTQVTHGGGGAPLTMIGGGGGEQGVTGSDGGGGRGRGGGKVAGGGKKGF", "length": 483, "header": "tr|Q3EDB7-1|Q3EDB7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q3EDB7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AUI5-1", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7/entry#A0A1P8AUI5-1", "sequence": { "sequence": "MTGGVNVDWSIGGSMVTSGGGGCPMTISGGRLFTGGGDPVIITGGRLSTGAAGGVNVDRSKGGGRRKTGDGGGDPVVISGGENHASGGMGGTSATRGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGGCETVPPGRGGGGDKTNGRGGEGREEDNGGGRGAEGGGRGSTGEGVTDGGGRTGNKGGNGGSIKIGVGTNGITGGTGGGEAGAGMQVMQGWGGGGSGAATQVMQGCGGGDAGAITQVMQGWGGGGAGAVTQVMQGCGGGGGGGDGGGGQGTGIGGGGGGEQGTGVGGGGDTCTQVTHGGGGAPLTMIGGGGGEQGVTGSDGGGGRGRGGGKVAGGGKKGF", "length": 419, "header": "tr|A0A1P8AUI5-1|A0A1P8AUI5_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q3EDB7-1" }, "locus": { "chromosome": "1", "start_pos": 5448726, "end_pos": 5450555, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15830.3", "url": "https://www.ensemblgenomes.org/id/AT1G15830.3" }, { "database": "Ensembl Peptide", "id": "AT1G15830.3", "url": "https://www.ensemblgenomes.org/id/AT1G15830.3" } ] } }, { "isoform_ac": "A0A1P8AUL1-1", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7/entry#A0A1P8AUL1-1", "sequence": { "sequence": "MTGGVNVDWSIGGSMVTSGGGGCPMTISGGRLFTGGGDPVIITGGRLSTGAAGGVNVDRSKGGGRRKTGDGGGDPVVISGGENHASGGMGGTSATRGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGGCETVPPGRGGGGDKTNGRGGEGREEDNGGGRGAEGGGRGSTGEGVTDGGGRTGNKGGNGGSIKIGVGTNGITGGTGGGEAGAGMQVMQGWGGGGSGAATQVMQGCGGGGGGGDGGGGQGTGIGGGGGGEQGTGVGGGGDTCTQVTHGGGGAPLTMIGGGGGEQGVTGSDGGGGRGRGGGKVAGGGKKGF", "length": 453, "header": "tr|A0A1P8AUL1-1|A0A1P8AUL1_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q3EDB7-1" }, "locus": { "chromosome": "1", "start_pos": 5448060, "end_pos": 5450617, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15830.2", "url": "https://www.ensemblgenomes.org/id/AT1G15830.2" }, { "database": "Ensembl Peptide", "id": "AT1G15830.2", "url": "https://www.ensemblgenomes.org/id/AT1G15830.2" } ] } }, { "isoform_ac": "Q3EDB7-1", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7/entry#Q3EDB7-1", "sequence": { "sequence": "MTGGVNVDWSIGGSMVTSGGGGCPMTISGGRLFTGGGDPVIITGGRLSTGAAGGVNVDRSKGGGRRKTGDGGGDPVVISGGENHASGGMGGTSATRGGGGEPVIPGAPPPNRGGGETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGGGGESVVPGAPPPKRGGGVIVNGGCETVPPGRGGGGDKTNGRGGEGREEDNGGGRGAEGGGRGSTGEGVTDGGGRTGNKGGNGGSIKIGVGTNGITGGTGGGEAGAGMQVMQGWGGGGSGAATQVMQGCGGGDAGAITQVMQGWGGGGAGAVTQVMQGCGGGGGGGDGGGGQGTGIGGGGGGEQGTGVGGGGDTCTQVTHGGGGAPLTMIGGGGGEQGVTGSDGGGGRGRGGGKVAGGGKKGF", "length": 483, "header": "tr|Q3EDB7-1|Q3EDB7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q3EDB7-1" }, "locus": { "chromosome": "1", "start_pos": 5448611, "end_pos": 5450554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15830.1", "url": "https://www.ensemblgenomes.org/id/AT1G15830.1" }, { "database": "Ensembl Peptide", "id": "AT1G15830.1", "url": "https://www.ensemblgenomes.org/id/AT1G15830.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q3EDB7", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3EDB7", "url": "https://www.uniprot.org/uniprotkb/Q3EDB7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G15830", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15830", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q3EDB7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 483, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q3EDB7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q3EDB7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], 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"MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM", "length": 598, "header": "sp|Q3EDF8-1|PPR28_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q3EDF8-1" }, "locus": { "chromosome": "1", "start_pos": 3218133, "end_pos": 3219929, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G09900.1", "url": "https://www.ensemblgenomes.org/id/AT1G09900.1" }, { "database": "Ensembl Peptide", "id": "AT1G09900.1", "url": "https://www.ensemblgenomes.org/id/AT1G09900.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 379, "end_pos": 379, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EDF8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EDF8" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser379" }, { "start_pos": 381, "end_pos": 381, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EDF8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EDF8" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser381" } ], "glycation": [], "keywords": [], "publication": [ { "title": 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"database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KDYVVVW", "url": "https://omabrowser.org/oma/group/KDYVVVW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259:SF31", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259:SF31", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q4PSE7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q4PSE7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT5G25290", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G25290", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q4PSE7", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q4PSE7-1", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDTLIIVGSMVTLWSEIPMDILRSVFERLSFVDLHRAKIVCSHWYSCSKQSFLRKTRSPLVILFSDDGDCTLYNPEEARVYKSKRDLSRYRFLANSGNWFLVLDPRSNLYIIDLFSEKKINLPPLDSFKGYKYNLKKVGARKFKELVSEYPTSFHHHAKDLRGLLWVDEKKEEYVVVWYFRNKYTMDSLAFCKNGEDHYREMPTHYGLHDISDMVLQRGDHIYLSTSCKYLQKLDLSRQEGIRTKNDDIISRYQLPCRPTNYKLVYDAKCWCSYNIAVTSSGEVLFVLSIFSQSTRRRIFFLYKEDPNPSPSEVIYKNLVEVDSLGDEALLLDLGITVPADSDLGIEPNSIYFTRHDRVANQKRSSPDICVFNIVTKTLKRFPGLSSLKDARWFLPS", "length": 397, "header": "sp|Q4PSE7-1|FB262_ARATH Isoform 1 of F-box protein At5g25290 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q4PSE7-1" }, "isoforms": [ { "isoform_ac": "Q4PSE7-1", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7/entry#Q4PSE7-1", "sequence": { "sequence": "MDTLIIVGSMVTLWSEIPMDILRSVFERLSFVDLHRAKIVCSHWYSCSKQSFLRKTRSPLVILFSDDGDCTLYNPEEARVYKSKRDLSRYRFLANSGNWFLVLDPRSNLYIIDLFSEKKINLPPLDSFKGYKYNLKKVGARKFKELVSEYPTSFHHHAKDLRGLLWVDEKKEEYVVVWYFRNKYTMDSLAFCKNGEDHYREMPTHYGLHDISDMVLQRGDHIYLSTSCKYLQKLDLSRQEGIRTKNDDIISRYQLPCRPTNYKLVYDAKCWCSYNIAVTSSGEVLFVLSIFSQSTRRRIFFLYKEDPNPSPSEVIYKNLVEVDSLGDEALLLDLGITVPADSDLGIEPNSIYFTRHDRVANQKRSSPDICVFNIVTKTLKRFPGLSSLKDARWFLPS", "length": 397, "header": "sp|Q4PSE7-1|FB262_ARATH Isoform 1 of F-box protein At5g25290 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q4PSE7-1" }, "locus": { "chromosome": "5", "start_pos": 8778592, "end_pos": 8779839, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G25290.1", "url": "https://www.ensemblgenomes.org/id/AT5G25290.1" }, { "database": "Ensembl Peptide", "id": "AT5G25290.1", "url": "https://www.ensemblgenomes.org/id/AT5G25290.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q4PSE7", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q4PSE7", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G25290", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G25290", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q4PSE7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 397, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q4PSE7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q4PSE7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q4PSE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4PSE7" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 11, "end_pos": 56, "start_aa": "Val", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q4PSI6-1", "uniprot_ac": "Q4PSI6", "uniprot_id": "FBD13_ARATH", "mass": { "chemical_mass": 52881.0, "monoisotopic_mass": 52881.0 }, "refseq": {}, "gene_names": [ { "name": "FCAALL.27", "type": "synonym", "evidence": [ { "id": "Q4PSI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6" } ] }, { "name": "dl3030c", "type": "synonym", "evidence": [ { "id": "Q4PSI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6" } ] } ], "protein_names": [ { "name": "FBD-associated F-box protein At4g13985", "type": "recommended", "evidence": [ { "id": "Q4PSI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q4PSI6", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6", "locus": {} } ], "crossref": [ { "id": "Q4PSI6", "url": "https://alphafold.ebi.ac.uk/entry/Q4PSI6", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G13985", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G13985", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G13985", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13985", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "INTHRDN", "url": "https://omabrowser.org/oma/group/INTHRDN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q4PSI6", "url": "https://www.orthodb.org/?gene=Q4PSI6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q4PSI6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q4PSI6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G13985", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G13985", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q4PSI6", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q4PSI6-1", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEDRESRVSAKPSGDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLECGDFMVREYYDSSEFNALLGFVYRFLGFNSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKVQHLHILDKTWGRDEVVIPPTVFTCGSLISLNLYDVYLPNREFVSLPSLKVIVLDAVVFDEDFAFEMLVSGCPVLESLSVNKINLNDISESVQVSSQSLLSFSYVADDDDYLEVVIDAPRLHYLKLNDKRTASFIMKNHGSLLKADIDFVFNLGSEYMFDPNYLPTRHIIRDFLVGLSGVKDMIISSSTLQVIYDYSRCEQLPLFRNVSFLRVEFADYRWEMLPIFLESCPNLKSLVLGFSIPPGKEGANILPGPRRFLTSLEYVKIAKPMAAEASEIKLKLVSYFLENSTILKKLTLCLRNFREKEESVIVKKLLTIPRLSPSCQVFVL", "length": 459, "header": "sp|Q4PSI6-1|FBD13_ARATH Isoform 1 of FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q4PSI6-1" }, "isoforms": [ { "isoform_ac": "Q4PSI6-1", "url": "https://www.uniprot.org/uniprotkb/Q4PSI6/entry#Q4PSI6-1", "sequence": { "sequence": "MEEDRESRVSAKPSGDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLECGDFMVREYYDSSEFNALLGFVYRFLGFNSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKVQHLHILDKTWGRDEVVIPPTVFTCGSLISLNLYDVYLPNREFVSLPSLKVIVLDAVVFDEDFAFEMLVSGCPVLESLSVNKINLNDISESVQVSSQSLLSFSYVADDDDYLEVVIDAPRLHYLKLNDKRTASFIMKNHGSLLKADIDFVFNLGSEYMFDPNYLPTRHIIRDFLVGLSGVKDMIISSSTLQVIYDYSRCEQLPLFRNVSFLRVEFADYRWEMLPIFLESCPNLKSLVLGFSIPPGKEGANILPGPRRFLTSLEYVKIAKPMAAEASEIKLKLVSYFLENSTILKKLTLCLRNFREKEESVIVKKLLTIPRLSPSCQVFVL", "length": 459, "header": "sp|Q4PSI6-1|FBD13_ARATH Isoform 1 of FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q4PSI6-1" }, "locus": { "chromosome": "4", "start_pos": 8080118, "end_pos": 8081669, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G13985.1", "url": "https://www.ensemblgenomes.org/id/AT4G13985.1" }, { "database": "Ensembl Peptide", "id": "AT4G13985.1", "url": "https://www.ensemblgenomes.org/id/AT4G13985.1" } ] } } ], "glycosylation": [], 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Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF132", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q4PT00", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q4PT00", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT1G47810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G47810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q4PT00", "url": "https://www.uniprot.org/uniprotkb/Q4PT00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q4PT00-1", "url": "https://www.uniprot.org/uniprotkb/Q4PT00-1", "database": "UniProtKB", 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"MADTEKSLQSLDPIPVDVLFEIFLNLPAKFLARFVCVSKLWAKIIRNQDFIRSFSFRSFRENKQHRLLFAFKNQIKGYQENWYFFSKSTHVSTPLYEPNSLVLPDQNINKFEALVGEEPPDFESSTVCHLKKMRYQNPSYVHGLISFLYGEEQIICNPSIGKSINLPTLGSSETIIGSFLGYDPIHAQYKVLCLNKSSLQFCGHQVLTLGAQNCSWRMIQCPTPHYPGTTSVCIDGVLYYSASRGFTMHEPLNLVRFDLRTESLEIASVFPEDFKSSVKPSLINYRGKVAVFSKYFCGDFGLWVLEDAKKQQWSKEQRISIRRGVIGRLPQGLQILGTSDMGEVIFAPNYF", "length": 351, "header": "sp|Q4PT00-1|FB46_ARATH Isoform 1 of F-box protein At1g47810 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q4PT00-1" }, "locus": { "chromosome": "1", "start_pos": 17603504, "end_pos": 17604559, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G47810.1", "url": "https://www.ensemblgenomes.org/id/AT1G47810.1" }, { "database": "Ensembl Peptide", "id": "AT1G47810.1", "url": "https://www.ensemblgenomes.org/id/AT1G47810.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the 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Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q4PT00", "url": "https://www.uniprot.org/uniprotkb/Q4PT00" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q4PT00", "url": "https://www.uniprot.org/uniprotkb/Q4PT00" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G47810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G47810", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 195, "end_pos": 197, "annotation": "n_glycosylation_sequon" }, { "start_pos": 213, "end_pos": 215, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q4PT00-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 351, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q4PT00-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q4PT00" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q4PT00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4PT00" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 8, "end_pos": 54, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 195, "end_pos": 197 }, { "start_pos": 213, "end_pos": 215 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"MLGYKCLHWNNLIDLPPLKDPETFSLPSSIPHWPPGQGFGSGTINLGKLQVIKITDFEFIWRYRSTEKKKNISFYKPKGLLPKDFHCLGHYCQSDSHPLRGYVLAARDLVDSLEQVEKPALVEPVDFTLVWSSNDSAENECSSKSECGYFWLPQPPEGYRSIGFVVTKTSVKPELNEVRCVRADLTDICEPHNVIVTAVSESLGVPLFIWRTRPSDRGMWGKGVSAGTFFCRTRLVAAREDLGIGIACLKNLDLSLHAMPNVDQIQALIQHYGPTLVFHPGETYLPSSVSWFFKNGAVLCEKGNPIEEPIDENGSNLPQGGSNDKQFWIDLPCDDQQRDFVKRGNLESSKLYIHIKPALGGTFTDLVFWIFCPFNGPATLKLGLVDISLISIGQHVCDWEHFTLRISNFSGELYSIYLSQHSGGEWIEAYDLEIIPGSNKAVVYSSKHGHASFPRAGTYLQGSTMLGIGIRNDTARSELLVDSSSRYEIIAAEYLSGNSVLAEPPWLQYMREWGPKVVYDSREEIERLVNRFPRTVRVSLATVLRKLPVELSGEEGPTGPKEKNNWYGDERC", "length": 572, "header": "sp|Q501D1-1|Y1490_ARATH Isoform 1 of Hypothetical protein At1g04090 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q501D1-1" }, "isoforms": [ { "isoform_ac": "Q501D1-1", "url": "https://www.uniprot.org/uniprotkb/Q501D1/entry#Q501D1-1", "sequence": { "sequence": 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"AT1G04090.1", "url": "https://www.ensemblgenomes.org/id/AT1G04090.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 558, "start_aa": "Thr", "end_pos": 558, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr558", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, 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"https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q501D1", "url": "https://www.uniprot.org/uniprotkb/Q501D1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G04090", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G04090", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 134, "end_pos": 136, "annotation": "n_glycosylation_sequon" }, { "start_pos": 313, "end_pos": 315, "annotation": "n_glycosylation_sequon" }, { "start_pos": 408, "end_pos": 410, "annotation": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q501E9-1", "uniprot_ac": "Q501E9", "uniprot_id": "FDL20_ARATH", "mass": { "chemical_mass": 52751.0, "monoisotopic_mass": 52751.0 }, "refseq": { "ac": "NP_190721", "name": "F-box/RNI-like/FBD-like domains-containing protein", 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cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q501E9", "locus": {} } ], "crossref": [ { "id": "Q501E9", "url": "https://alphafold.ebi.ac.uk/entry/Q501E9", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G51530", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G51530", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824316", "url": "https://www.ncbi.nlm.nih.gov/gene/824316", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": 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"Enzyme and Pathway" ] }, { "id": "VRFPSCL", "url": "https://omabrowser.org/oma/group/VRFPSCL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q501E9", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q501E9", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_190721", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190721", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51530", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51530", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q501E9", "url": "https://www.uniprot.org/uniprotkb/Q501E9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q501E9-1", "url": "https://www.uniprot.org/uniprotkb/Q501E9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKNSERFSAAKPLMEQGGKSSRKPGFMSEDRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESSRNIYDFAENVTRSLLSHKAPVLESLHLKVGDQFDGVYVGVWATIAFTRHVREFVLDLSSYHGPRVRFPTSLFCFDTLETLKLDYVYIYVPCPVSMKSLRTLHLLSVVYKGDESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLKTLLLSDPFSARESSRGYVIKAPSLKYLGIESVEGFEYFLIENVTELVEANIRNVSKIVNENILGSLKSAKRLSLDLSPLKITYPTEVMYHQLVYLEMHTHKVEWWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKKYKDQGKWNQPKYVPECLETFMWRNCNWGREEEKEVATYILRNARQLKKATFSTDPIEAKRLCKLAKRRKMREELDGVVMTSNSCHLVFEFE", "length": 455, "header": "sp|Q501E9-1|FDL20_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At3g51530 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q501E9-1" }, "isoforms": [ { "isoform_ac": "Q501E9-1", "url": "https://www.uniprot.org/uniprotkb/Q501E9/entry#Q501E9-1", "sequence": { "sequence": "MKNSERFSAAKPLMEQGGKSSRKPGFMSEDRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESSRNIYDFAENVTRSLLSHKAPVLESLHLKVGDQFDGVYVGVWATIAFTRHVREFVLDLSSYHGPRVRFPTSLFCFDTLETLKLDYVYIYVPCPVSMKSLRTLHLLSVVYKGDESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLKTLLLSDPFSARESSRGYVIKAPSLKYLGIESVEGFEYFLIENVTELVEANIRNVSKIVNENILGSLKSAKRLSLDLSPLKITYPTEVMYHQLVYLEMHTHKVEWWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKKYKDQGKWNQPKYVPECLETFMWRNCNWGREEEKEVATYILRNARQLKKATFSTDPIEAKRLCKLAKRRKMREELDGVVMTSNSCHLVFEFE", "length": 455, "header": "sp|Q501E9-1|FDL20_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At3g51530 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q501E9-1" }, "locus": { "chromosome": "3", "start_pos": 19112694, "end_pos": 19114643, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51530.1", "url": "https://www.ensemblgenomes.org/id/AT3G51530.1" }, { "database": "Ensembl Peptide", "id": "AT3G51530.1", "url": "https://www.ensemblgenomes.org/id/AT3G51530.1" } ] } } ], "glycosylation": [], 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"F11A17_5", "type": "synonym", "evidence": [ { "id": "NP_175273", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175273" } ] } ], "protein_names": [ { "name": "F-box/LRR-repeat protein At1g48400", "type": "recommended", "evidence": [ { "id": "Q56XW8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q56XW8/entry#names_and_taxonomy" } ] }, { "name": "F-box/RNI-like/FBD-like domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_175273", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175273" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q56XW8", "url": "https://www.uniprot.org/uniprotkb/Q56XW8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": 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Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q56XX3", "url": "https://www.uniprot.org/uniprotkb/Q56XX3" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q56XX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q56XX3" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference 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Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q58G02", "url": "https://www.uniprot.org/uniprotkb/Q58G02" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G30615", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G30615", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q58G02", "url": "https://www.uniprot.org/uniprotkb/Q58G02" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], 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"categories": [ "Protein" ] }, { "id": "Q5BPP4-1", "url": "https://www.uniprot.org/uniprotkb/Q5BPP4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADILRQLLDCGKLSDETCHSILCGLGQHVDALHLSKTEEEVDGWTSEEDEELDQEYCRQVTESLGFDIDGKVCIPACGISPVFLGANKNPRSEVALYGRLGVHCFNIDKERKFQYMRIPKYNVQYPEAMSFHITVEVNDLADNSAHTLQNLVTRSFSRNGEDLRVSTGICRIKPKTPEREICLVDEEAIDKFYRGVMPNFVSKLGADDDKLRFYEVQEQDVCANDWLRLYTEFALFSYWRYNEDGFESCLPVEIKKIIVETCDTHREPRMKLKSSNAIFHINFNAKSCDYKSVSRRTTDGKPGHIVLEINTWKLSST", "length": 318, "header": "sp|Q5BPP4-1|Y3477_ARATH Isoform 1 of UPF0725 protein At3g44770 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q5BPP4-1" }, "isoforms": [ { "isoform_ac": "F4J494-1", "url": "https://www.uniprot.org/uniprotkb/Q5BPP4/entry#F4J494-1", "sequence": { "sequence": "MSTPRLRRMPRLVNKAYRSIRWNWRHLHYRVPLGLGIFLMVCSPPRLFLLNCNVQGFLRGIQATTRENCALHTKTKSCWIVENYLTKPATRFCVDWVNMSMLYIYPKPKKKSTDGHLRKMKNLTKNTVAKLPSLWYSSHVSALIWYLGSGFDIDGKVCIPACGISPVFLGANKNPRSEVALYGRLGVHCFNIDKERKFQYMRIPKYNVQYPEAMSFHITVEVNDLADNSAHTLQNLVTRSFSRNGEDLRVSTGICRIKPKTPEREICLVDEEAIDKFYRGVMPNFVSKLGADDDKLRFYEVQEQDVCANDWLRLYTEFALFSYWRYNEDGFESCLPVEIKKIIVETCDTHREPRMKLKLNPSDADFIKFAIIYDMILVATMISLWMMFLGEKPEFIDFDNFELSKVTFRGTVGILGIMMAGAYLCGPNNCIIFCLFDVALFGYKTIGFKRIGKELAMIYGFLALAFLLMYLFGFFFGVLWLLVSPPSLLLGFQFLKRRNVKESQD", "length": 505, "header": "tr|F4J494-1|F4J494_ARATH Computationally mapped isoform of Transmembrane protein, putative (DUF626) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q5BPP4-1" }, "locus": { "chromosome": "3", "start_pos": 16316080, "end_pos": 16319707, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44770.1", "url": "https://www.ensemblgenomes.org/id/AT3G44770.1" }, { "database": "Ensembl Peptide", "id": "AT3G44770.1", "url": 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"https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants.", "journal": "Plant Physiol.", "date": "2005", "authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q5BPP4", "url": "https://www.uniprot.org/uniprotkb/Q5BPP4" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": "https://glygen.org/publication/PubMed/16244158" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q5BPP4", "url": "https://www.uniprot.org/uniprotkb/Q5BPP4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44770", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q5BPP4", "url": "https://www.uniprot.org/uniprotkb/Q5BPP4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q5BPP4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 318, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q5BPW2", "url": "https://www.uniprot.org/uniprotkb/Q5BPW2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q5BPW2", "url": "https://www.uniprot.org/uniprotkb/Q5BPW2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], 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variants.", "journal": "Plant Physiol.", "date": "2005", "authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q5S4V7", "url": "https://www.uniprot.org/uniprotkb/Q5S4V7" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": "https://glygen.org/publication/PubMed/16244158" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q5S4V7", "url": "https://www.uniprot.org/uniprotkb/Q5S4V7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G39490", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G39490", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 228, "end_pos": 230, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q5S4V7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 387, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q5S4V7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q5S4V7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 228, "end_pos": 230 }, { "start_pos": 54, "end_pos": 56 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q5XVH5-1", "uniprot_ac": "Q5XVH5", "uniprot_id": "Y1710_ARATH", "mass": { "chemical_mass": 50022.0, "monoisotopic_mass": 50022.0 }, "refseq": {}, "gene_names": [ { "name": "LSM8", "type": "recommended", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ] }, { "name": "AtLSM8", "type": "synonym", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ] }, { "name": "F1E22.8", "type": "synonym", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ] }, { "name": "F1E22_8", "type": "synonym", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ] }, { "name": "SM-like 8", "type": "synonym", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ] } ], "protein_names": [ { "name": "Uncharacterized protein At1g65710", "type": "recommended", "evidence": [ { "id": "Q5XVH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.", "evidence": [ { "database": "UniProtKB", "id": "F4IBJ7", "url": "https://www.uniprot.org/uniprotkb/F4IBJ7#function" }, { "database": "UniProtKB", "id": "RU365048", "url": "https://www.uniprot.org/uniprotkb/RU365048#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q5XVH5", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5", "locus": {} } ], "crossref": [ { "id": "Q5XVH5", "url": "https://alphafold.ebi.ac.uk/entry/Q5XVH5", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G65700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G65700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT1G65710", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G65710", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd01727", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01727", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "842881", "url": "https://www.ncbi.nlm.nih.gov/gene/842881", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "842882", "url": "https://www.ncbi.nlm.nih.gov/gene/842882", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001163", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001163", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010920", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010920", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034103", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034103", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044642", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044642", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G65710", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G65710", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CCSLEEQ", "url": "https://omabrowser.org/oma/group/CCSLEEQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4IBJ7", "url": "https://www.orthodb.org/?gene=F4IBJ7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15588", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15588", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15588:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15588:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34367", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34367", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34367:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34367:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01423", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01423", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q5XVH5", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q5XVH5", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT1G65700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G65700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT1G65710", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G65710", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4IBJ7", "url": "https://www.uniprot.org/uniprotkb/F4IBJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IBJ7-1", "url": "https://www.uniprot.org/uniprotkb/F4IBJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q5XVH5", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q5XVH5-1", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCCLSKKPSPSLPSSVKPSDPIKPMEPVIEPLEEEAKPKSEKLNQEEEEEEVVVIKHTRSHEERSKKTESDKDSPVSSPVAAEKSNSTPLVRISSCTKEEVDAILIQCGKLSRSNSAAKTRRYSGSKRSFDFDQNERIRGGDAAEEDGMQRNRHRGVERVHGSPRERRRRTPSRERERSGSRERGNVGGGGGGSRRVSRSPAKRSEIRNADSCGSSVNSSNNRPGKFVTIPATDKSNNVEPLVKRITVKRNIGDACRIAASPRSKSPARAGNNVPSLSRSNSRKAEQSPYRRNPLGEIDQNTKKMIESVKPNSRTSRGPSPSRVAVVELTKAPQVVLSRSRSLRKSRDFDLVSNEDNNYTALLLKDIQSFHGKSVDDSVISLPLCVSKACSIVEAVADLNSMTNRTCLRSDSSRFRFTSTVKKADLMEPSFEKYVTVKRGGGSLEESSGSNNVT", "length": 455, "header": "sp|Q5XVH5-1|Y1710_ARATH Isoform 1 of Uncharacterized protein At1g65710 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q5XVH5-1" }, "isoforms": [ { "isoform_ac": "F4IBJ7-1", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5/entry#F4IBJ7-1", "sequence": { "sequence": "MAATTGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIGLVLQFFVCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH", "length": 141, "header": "tr|F4IBJ7-1|F4IBJ7_ARATH Computationally mapped isoform of U6 snRNA-associated Sm-like protein LSm8 OS=Arabidopsis thaliana OX=3702 GN=LSM8 PE=3 SV=1 CANONICAL=Q5XVH5-1" }, "locus": { "chromosome": "1", "start_pos": 24434203, "end_pos": 24436294, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G65700.3", "url": "https://www.ensemblgenomes.org/id/AT1G65700.3" }, { "database": "Ensembl Peptide", "id": "AT1G65700.3", "url": "https://www.ensemblgenomes.org/id/AT1G65700.3" } ] } }, { "isoform_ac": "Q5XVH5-1", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5/entry#Q5XVH5-1", "sequence": { "sequence": "MGCCLSKKPSPSLPSSVKPSDPIKPMEPVIEPLEEEAKPKSEKLNQEEEEEEVVVIKHTRSHEERSKKTESDKDSPVSSPVAAEKSNSTPLVRISSCTKEEVDAILIQCGKLSRSNSAAKTRRYSGSKRSFDFDQNERIRGGDAAEEDGMQRNRHRGVERVHGSPRERRRRTPSRERERSGSRERGNVGGGGGGSRRVSRSPAKRSEIRNADSCGSSVNSSNNRPGKFVTIPATDKSNNVEPLVKRITVKRNIGDACRIAASPRSKSPARAGNNVPSLSRSNSRKAEQSPYRRNPLGEIDQNTKKMIESVKPNSRTSRGPSPSRVAVVELTKAPQVVLSRSRSLRKSRDFDLVSNEDNNYTALLLKDIQSFHGKSVDDSVISLPLCVSKACSIVEAVADLNSMTNRTCLRSDSSRFRFTSTVKKADLMEPSFEKYVTVKRGGGSLEESSGSNNVT", "length": 455, "header": "sp|Q5XVH5-1|Y1710_ARATH Isoform 1 of Uncharacterized protein At1g65710 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q5XVH5-1" }, "locus": { "chromosome": "1", "start_pos": 24436901, "end_pos": 24438623, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G65710.1", "url": "https://www.ensemblgenomes.org/id/AT1G65710.1" }, { "database": "Ensembl Peptide", "id": "AT1G65710.1", "url": "https://www.ensemblgenomes.org/id/AT1G65710.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 130, "end_pos": 130, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q5XVH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5XVH5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser130" }, { "start_pos": 265, "end_pos": 265, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q5XVH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5XVH5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Ser265" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q5XVH5", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.", "journal": "Plant Biotechnol. J.", "date": "2006", "authors": "Underwood Beverly A, Vanderhaeghen Rudy, Whitford Ryan, Town Christopher D, Hilson Pierre", "evidence": [ { "database": "UniProtKB", "id": "Q5XVH5", "url": "https://www.uniprot.org/uniprotkb/Q5XVH5" } ], "reference": [ { "type": "PubMed", "id": "17147637", "url": "https://glygen.org/publication/PubMed/17147637" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q5XVH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5XVH5" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q5XVH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5XVH5" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q5XVH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5XVH5" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q6DBN6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q6DBN6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_175548", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175548", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G51370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G51370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4I9I0", "url": "https://www.uniprot.org/uniprotkb/F4I9I0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4I9I0-1", "url": "https://www.uniprot.org/uniprotkb/F4I9I0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4I9I1", "url": "https://www.uniprot.org/uniprotkb/F4I9I1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4I9I1-1", "url": "https://www.uniprot.org/uniprotkb/F4I9I1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6DBN6", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6DBN6-1", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVGGKKKTKICDKVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNFQIISSGFPAKLDIDFVNTGGRYQKKKVIEDILIDISRVRDLVISSNTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESLILEMVKNQSTRRHGEKREPNVMVSTVPWCLVSSLKFVELKRSIPRYEGEMELVRYVLTNSTVLKKLRLNVYYTKKAKCAFLTELVAIPRCSSTCVVLVL", "length": 435, "header": "sp|Q6DBN6-1|FDL6_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At1g51370 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6DBN6-1" }, "isoforms": [ { "isoform_ac": "F4I9I0-1", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6/entry#F4I9I0-1", "sequence": { "sequence": "MVGGKKKTKICDKVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNFQIISSGFPAKLDIDFVNTGGRYQKKKVIEDILIDISRVRDLVISSNTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESLILEMVKNQSTRRHGEKREPNVMVSTVPWCLVSSLKFVELKRSIPRLNVYYTKKAKCAFLTELVAIPRCSSTCVVLVL", "length": 413, "header": "tr|F4I9I0-1|F4I9I0_ARATH Computationally mapped isoform of F-box/RNI-like/FBD-like domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q6DBN6-1" }, "locus": { "chromosome": "1", "start_pos": 19045059, "end_pos": 19047518, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G51370.3", "url": "https://www.ensemblgenomes.org/id/AT1G51370.3" }, { "database": "Ensembl Peptide", "id": "AT1G51370.3", "url": "https://www.ensemblgenomes.org/id/AT1G51370.3" } ] } }, { "isoform_ac": "F4I9I1-1", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6/entry#F4I9I1-1", "sequence": { "sequence": "MVGGKKKTKICDKVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNFQIISSGFPAKLDIDFVNTGGRYQKKKVIEDILIDISRVRDLVISSNTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESLILVMSSFNPS", "length": 346, "header": "tr|F4I9I1-1|F4I9I1_ARATH Computationally mapped isoform of F-box/RNI-like/FBD-like domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q6DBN6-1" }, "locus": { "chromosome": "1", "start_pos": 19045615, "end_pos": 19046825, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G51370.2", "url": "https://www.ensemblgenomes.org/id/AT1G51370.2" }, { "database": "Ensembl Peptide", "id": "AT1G51370.2", "url": "https://www.ensemblgenomes.org/id/AT1G51370.2" } ] } }, { "isoform_ac": "Q6DBN6-1", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6/entry#Q6DBN6-1", "sequence": { "sequence": "MVGGKKKTKICDKVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDINEFIDVVIYAPLLQCLRAKMYSTKNFQIISSGFPAKLDIDFVNTGGRYQKKKVIEDILIDISRVRDLVISSNTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESLILEMVKNQSTRRHGEKREPNVMVSTVPWCLVSSLKFVELKRSIPRYEGEMELVRYVLTNSTVLKKLRLNVYYTKKAKCAFLTELVAIPRCSSTCVVLVL", "length": 435, "header": "sp|Q6DBN6-1|FDL6_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At1g51370 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6DBN6-1" }, "locus": { "chromosome": "1", "start_pos": 19045212, "end_pos": 19047453, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G51370.1", "url": "https://www.ensemblgenomes.org/id/AT1G51370.1" }, { "database": "Ensembl Peptide", "id": "AT1G51370.1", "url": "https://www.ensemblgenomes.org/id/AT1G51370.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q6DBN6", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6DBN6", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G51370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G51370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6DBN6", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 169, "end_pos": 171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 174, "end_pos": 176, "annotation": "n_glycosylation_sequon" }, { "start_pos": 343, "end_pos": 345, "annotation": "n_glycosylation_sequon" }, { "start_pos": 395, "end_pos": 397, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q6DBN6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 435, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q6DBN6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q6DBN6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q6DBN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6DBN6" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 18, "end_pos": 64, "start_aa": "Glu", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 169, "end_pos": 171 }, { "start_pos": 174, "end_pos": 176 }, { "start_pos": 343, "end_pos": 345 }, { "start_pos": 395, "end_pos": 397 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q6DR02-1", "uniprot_ac": "Q6DR02", "uniprot_id": "Q6DR02_ARATH", "mass": { "chemical_mass": 28221.0, "monoisotopic_mass": 28221.0 }, "refseq": { "ac": "NP_189224", "name": "TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189224" }, "gene_names": [], "protein_names": [ { "name": "TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein", "type": "synonym", "evidence": [ { "id": "NP_189224", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189224" }, { "id": "Q6DR02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6DR02/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6DR02", "url": "https://www.uniprot.org/uniprotkb/Q6DR02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q6DR02", "locus": {} } ], "crossref": [ { "id": "822192", "url": "https://www.ncbi.nlm.nih.gov/gene/822192", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006634", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006634", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040327", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040327", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G25950", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G25950", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ACQNTWS", "url": "https://omabrowser.org/oma/group/ACQNTWS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q6DR02", "url": "https://www.orthodb.org/?gene=Q6DR02", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31766", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31766", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31766:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31766:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03798", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03798", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189224", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189224", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G25950", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25950", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q6DR02", "url": "https://www.uniprot.org/uniprotkb/Q6DR02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6DR02-1", "url": "https://www.uniprot.org/uniprotkb/Q6DR02-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METASFNPSSFLATFPSFLLLFLAVYTIGYFLVFRTWKQSSHLGASCLMSLFHGTPAVIMASHALLTTPRADVHSFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFAVGHGAHGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLAGPVVLYDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNSSKKYK", "length": 251, "header": "tr|Q6DR02-1|Q6DR02_ARATH Isoform 1 of TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein OS=Arabidopsis thaliana 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"authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6DR13", "url": "https://www.uniprot.org/uniprotkb/Q6DR13" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": "https://glygen.org/publication/PubMed/16244158" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6DR13", "url": "https://www.uniprot.org/uniprotkb/Q6DR13" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G42720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G42720", 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"https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants.", "journal": "Plant Physiol.", "date": "2005", "authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6DR20", "url": "https://www.uniprot.org/uniprotkb/Q6DR20" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": "https://glygen.org/publication/PubMed/16244158" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q6DR20", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6DR20" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6DR20", "url": "https://www.uniprot.org/uniprotkb/Q6DR20" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G17036", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G17036", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein ubiquitination", "id": 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"id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q6ICX6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q6ICX6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191317", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191317", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57580", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G57580", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q6ICX6", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6ICX6-1", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRGKMNVSLPTDLIREIFARLPSKSVARFRTLSKQWASILRSTDFTKLFLSRSSNRPRLLFAVERYKCNEWQFFSSPQSQNRYEKSAHLEFHSKFSGDVSHYICSYASGLLYFPAVHIVDTETIVICNPITGMYTGLPVIMKDRRSRGFLVFDPVDKRFKAFDTHFILTLGSGELKWREKNIPCPLYERCSSNQGICINGVLYYLAKTVLVETVFGLTFLIVRFDVSSEEFKFIDAARFNDRLKDPTRLSLVNYMGKLGVTDCNCVDAGGRRTVELCLWVLEDVEKLEWVKYVYTLPENEVLASCEFSVAGVTATGDIVLCMKYTCKPYYVFYFNPEKKTLQTVEIQGFGAKLEEVENRGEVFAYVDYVEDLSLNDAKQLKSSISHVKSLCPCCQKLVQPENIGEVV", "length": 408, "header": "sp|Q6ICX6-1|FB329_ARATH Isoform 1 of F-box protein At3g57580 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6ICX6-1" }, "isoforms": [ { "isoform_ac": "Q6ICX6-1", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6/entry#Q6ICX6-1", "sequence": { "sequence": "MDRGKMNVSLPTDLIREIFARLPSKSVARFRTLSKQWASILRSTDFTKLFLSRSSNRPRLLFAVERYKCNEWQFFSSPQSQNRYEKSAHLEFHSKFSGDVSHYICSYASGLLYFPAVHIVDTETIVICNPITGMYTGLPVIMKDRRSRGFLVFDPVDKRFKAFDTHFILTLGSGELKWREKNIPCPLYERCSSNQGICINGVLYYLAKTVLVETVFGLTFLIVRFDVSSEEFKFIDAARFNDRLKDPTRLSLVNYMGKLGVTDCNCVDAGGRRTVELCLWVLEDVEKLEWVKYVYTLPENEVLASCEFSVAGVTATGDIVLCMKYTCKPYYVFYFNPEKKTLQTVEIQGFGAKLEEVENRGEVFAYVDYVEDLSLNDAKQLKSSISHVKSLCPCCQKLVQPENIGEVV", "length": 408, "header": "sp|Q6ICX6-1|FB329_ARATH Isoform 1 of F-box protein At3g57580 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6ICX6-1" }, "locus": { "chromosome": "3", "start_pos": 21320491, "end_pos": 21322379, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57580.1", "url": "https://www.ensemblgenomes.org/id/AT3G57580.1" }, { "database": "Ensembl Peptide", "id": "AT3G57580.1", "url": "https://www.ensemblgenomes.org/id/AT3G57580.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q6ICX6", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6ICX6", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57580", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57580", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6ICX6", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 7, "end_pos": 9, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q6ICX6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 408, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q6ICX6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q6ICX6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q6ICX6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6ICX6" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 4, "end_pos": 53, "start_aa": "Gly", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 7, "end_pos": 9 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q6NKN8-1", "uniprot_ac": "Q6NKN8", "uniprot_id": "FB132_ARATH", "mass": { "chemical_mass": 43484.0, "monoisotopic_mass": 43484.0 }, "refseq": {}, "gene_names": [ { "name": "T3K9.6", "type": "synonym", "evidence": [ { "id": "Q6NKN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8" } ] }, { "name": "T3K9_6", "type": "synonym", "evidence": [ { "id": "Q6NKN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8" } ] } ], "protein_names": [ { "name": "F-box protein At2g41170", "type": "recommended", "evidence": [ { "id": "Q6NKN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NKN8", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8", "locus": {} } ], "crossref": [ { "id": "Q6NKN8", "url": "https://alphafold.ebi.ac.uk/entry/Q6NKN8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT2G41170", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G41170", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "818716", "url": "https://www.ncbi.nlm.nih.gov/gene/818716", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G41170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G41170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MENKWGR", "url": "https://omabrowser.org/oma/group/MENKWGR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31482", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31482", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31482:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31482:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q6NKN8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q6NKN8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT2G41170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G41170", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AXV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AXV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AXX9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AXX9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXX9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NKN8", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NKN8-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKQYLTFISFCFSITICGFLIVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVGHLQNCDGVQNCRCDSDENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE", "length": 371, "header": "sp|Q6NKN8-1|FB132_ARATH Isoform 1 of F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6NKN8-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AXV4-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8/entry#A0A1P8AXV4-1", "sequence": { "sequence": "MEKQYLTFISFCFSITICGFLIVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVGHLQNCDGVQNCRCDSDGNNLISVFIFWSETVDSLIKENKMFNGILLAMAENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE", "length": 404, "header": "tr|A0A1P8AXV4-1|A0A1P8AXV4_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q6NKN8-1" }, "locus": { "chromosome": "2", "start_pos": 17159074, "end_pos": 17161293, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G41170.2", "url": "https://www.ensemblgenomes.org/id/AT2G41170.2" }, { "database": "Ensembl Peptide", "id": "AT2G41170.2", "url": "https://www.ensemblgenomes.org/id/AT2G41170.2" } ] } }, { "isoform_ac": "A0A1P8AXX9-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8/entry#A0A1P8AXX9-1", "sequence": { "sequence": "MEKQYLTFISFCFSITICGFLIVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGASSFSLSFPNILF", "length": 299, "header": "tr|A0A1P8AXX9-1|A0A1P8AXX9_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q6NKN8-1" }, "locus": { "chromosome": "2", "start_pos": 17159104, "end_pos": 17161294, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G41170.3", "url": "https://www.ensemblgenomes.org/id/AT2G41170.3" }, { "database": "Ensembl Peptide", "id": "AT2G41170.3", "url": "https://www.ensemblgenomes.org/id/AT2G41170.3" } ] } }, { "isoform_ac": "Q6NKN8-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8/entry#Q6NKN8-1", "sequence": { "sequence": "MEKQYLTFISFCFSITICGFLIVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVGHLQNCDGVQNCRCDSDENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE", "length": 371, "header": "sp|Q6NKN8-1|FB132_ARATH Isoform 1 of F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6NKN8-1" }, "locus": { "chromosome": "2", "start_pos": 17159074, "end_pos": 17161293, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G41170.1", "url": "https://www.ensemblgenomes.org/id/AT2G41170.1" }, { "database": "Ensembl Peptide", "id": "AT2G41170.1", "url": "https://www.ensemblgenomes.org/id/AT2G41170.1" } ] } } ], "glycosylation": [], "phosphorylation": [], 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Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6NKN8", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G41170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G41170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q6NKN8", "url": "https://www.uniprot.org/uniprotkb/Q6NKN8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 143, "end_pos": 145, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": 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"Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G19280", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G19280", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YFFRWSE", "url": "https://omabrowser.org/oma/group/YFFRWSE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47941", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47941", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q6NKW7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q6NKW7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT2G19280", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G19280", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q6NKW7", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NKW7-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWVSIFNLKSSGLNHFCTRTKAFRYFWCRTFSLASLSENNSRFQTDSSRLPYSGSRYYHSSSKHFGEDFVSILKNIDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTSGG", "length": 693, "header": "sp|Q6NKW7-1|PP164_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q6NKW7-1" }, "isoforms": [ { "isoform_ac": "Q6NKW7-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7/entry#Q6NKW7-1", "sequence": { "sequence": "MWVSIFNLKSSGLNHFCTRTKAFRYFWCRTFSLASLSENNSRFQTDSSRLPYSGSRYYHSSSKHFGEDFVSILKNIDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTSGG", "length": 693, "header": "sp|Q6NKW7-1|PP164_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q6NKW7-1" }, "locus": { "chromosome": "2", "start_pos": 8362387, "end_pos": 8364753, "strand": "+", 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"https://www.uniprot.org/uniprotkb/Q6NKW7" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.", "journal": "Plant Cell", "date": "2004", "authors": "Lurin Claire, Andr\u00e9s Charles, Aubourg S\u00e9bastien, Bellaoui Mohammed, Bitton Fr\u00e9d\u00e9rique, Bruy\u00e8re Cl\u00e9mence, Caboche Michel, Debast C\u00e9drig, Gualberto Jos\u00e9, Hoffmann Beate, Lecharny Alain, Le Ret Monique, Martin-Magniette Marie-Laure, Mireau Hakim, Peeters Nemo, Renou Jean-Pierre, Szurek Boris, Taconnat Ludivine, Small Ian", "evidence": [ { "database": "UniProtKB", "id": "Q6NKW7", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7" } ], "reference": [ { "type": "PubMed", "id": "15269332", "url": "https://glygen.org/publication/PubMed/15269332" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6NKW7", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G19280", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G19280", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q6NKW7", "url": "https://www.uniprot.org/uniprotkb/Q6NKW7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" }, { "start_pos": 652, "end_pos": 654, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q6NKW7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 693, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q6NKW7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q6NKW7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 39, "end_pos": 41 }, { "start_pos": 652, "end_pos": 654 } ] }, "class_list": [], "section_stats": [ 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"Protein" ] }, { "id": "Q6NLB1", "url": "https://www.uniprot.org/uniprotkb/Q6NLB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NLB1-1", "url": "https://www.uniprot.org/uniprotkb/Q6NLB1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLYLLITCLSFFFFSKSLSFPQWASKTKNLLSFYFSKYLFTNSLHQITPDLASPVLGKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLSSIFRDDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQWRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRDHREKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE", "length": 371, "header": "sp|Q6NLB1-1|FB118_ARATH Isoform 1 of F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q6NLB1-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AXG8-1", "url": "https://www.uniprot.org/uniprotkb/Q6NLB1/entry#A0A1P8AXG8-1", "sequence": { "sequence": "MLLYLLITCLSFFFFSKSLSFPQWASKTKNLLSFYFSKYLFTNSLHQITPDLASPVLGKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLSSIFRDDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQWRRNKEFPYVLLDTWNLVMAI", "length": 296, "header": "tr|A0A1P8AXG8-1|A0A1P8AXG8_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q6NLB1-1" }, "locus": { "chromosome": "2", "start_pos": 11448976, "end_pos": 11451270, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G26850.2", "url": "https://www.ensemblgenomes.org/id/AT2G26850.2" }, { "database": "Ensembl Peptide", "id": "AT2G26850.2", "url": "https://www.ensemblgenomes.org/id/AT2G26850.2" } ] } }, { "isoform_ac": "Q6NLB1-1", "url": "https://www.uniprot.org/uniprotkb/Q6NLB1/entry#Q6NLB1-1", "sequence": { "sequence": 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q6NLE0-1", "uniprot_ac": "Q6NLE0", "uniprot_id": "FB279_ARATH", "mass": { "chemical_mass": 21855.0, "monoisotopic_mass": 21855.0 }, "refseq": {}, "gene_names": [ { "name": "MBK23.26", "type": "synonym", "evidence": [ { "id": "Q6NLE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLE0" } ] } ], "protein_names": [ { "name": "F-box protein At5g41720", "type": "recommended", "evidence": [ { "id": "Q6NLE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLE0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NLE0", "url": "https://www.uniprot.org/uniprotkb/Q6NLE0" } ], "common_name": 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I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones.", "journal": "DNA Res.", "date": "1997", "authors": "Sato S, Kotani H, Nakamura Y, Kaneko T, Asamizu E, Fukami M, Miyajima N, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q6NLE0", "url": "https://www.uniprot.org/uniprotkb/Q6NLE0" } ], "reference": [ { "type": "PubMed", "id": "9330910", "url": "https://glygen.org/publication/PubMed/9330910" } ] } ], "pathway": [ { "id": "ath:AT5G41720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G41720", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": 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"2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6NLY8", "url": "https://www.uniprot.org/uniprotkb/Q6NLY8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana.", "journal": "Nature", "date": "1998", "authors": "Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W, Van Staveren M, Stiekema W, Drost L, Ridley P, Hudson S A, Patel K, Murphy G, Piffanelli P, Wedler H, Wedler E, Wambutt R, Weitzenegger T, Pohl T M, Terryn N, Gielen J, Villarroel R, De Clerck R, Van Montagu M, Lecharny A, Auborg S, Gy I, Kreis M, Lao N, Kavanagh T, Hempel S, Kotter P, Entian K D, Rieger M, Schaeffer M, Funk B, Mueller-Auer S, Silvey M, James R, Montfort A, Pons A, Puigdomenech P, Douka A, Voukelatou E, Milioni D, Hatzopoulos P, Piravandi E, Obermaier B, Hilbert H, D\u00fcsterh\u00f6ft A, Moores T, Jones J D, Eneva T, Palme K, Benes V, Rechman S, Ansorge W, Cooke R, Berger C, Delseny M, Voet M, Volckaert G, Mewes H W, Klosterman S, Schueller C, Chalwatzis N", "evidence": [ { "database": "UniProtKB", "id": "Q6NLY8", "url": "https://www.uniprot.org/uniprotkb/Q6NLY8" } ], "reference": [ { "type": "PubMed", "id": "9461215", "url": "https://glygen.org/publication/PubMed/9461215" } ] } ], "pathway": [ { "id": "ath:AT4G36720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G36720", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 181, "end_pos": 183, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q6NLY8-F1", "pdb_chain": 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"AT1G55630", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G55630", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q7X6A5", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q7X6A5-1", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRRS", "length": 477, "header": "sp|Q7X6A5-1|PPR81_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q7X6A5-1" }, "isoforms": [ { "isoform_ac": "Q7X6A5-1", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5/entry#Q7X6A5-1", "sequence": { "sequence": "MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQEENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRRS", "length": 477, "header": "sp|Q7X6A5-1|PPR81_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q7X6A5-1" }, "locus": { "chromosome": "1", "start_pos": 20791635, "end_pos": 20793581, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G55630.1", "url": "https://www.ensemblgenomes.org/id/AT1G55630.1" }, { "database": "Ensembl Peptide", "id": "AT1G55630.1", "url": "https://www.ensemblgenomes.org/id/AT1G55630.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q7X6A5", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu 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"PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.", "journal": "Plant Cell", "date": "2004", "authors": "Lurin Claire, Andr\u00e9s Charles, Aubourg S\u00e9bastien, Bellaoui Mohammed, Bitton Fr\u00e9d\u00e9rique, Bruy\u00e8re Cl\u00e9mence, Caboche Michel, Debast C\u00e9drig, Gualberto Jos\u00e9, Hoffmann Beate, Lecharny Alain, Le Ret Monique, Martin-Magniette Marie-Laure, Mireau Hakim, Peeters Nemo, Renou Jean-Pierre, Szurek Boris, Taconnat Ludivine, Small Ian", "evidence": [ { "database": "UniProtKB", "id": "Q7X6A5", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5" } ], "reference": [ { "type": "PubMed", "id": "15269332", "url": "https://glygen.org/publication/PubMed/15269332" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q7X6A5", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G55630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G55630", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q7X6A5", "url": "https://www.uniprot.org/uniprotkb/Q7X6A5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": 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"MLKRDCSSVVGSERERDGSSLALKRHCSSVVKLLLPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFADDEDKYGRKAVFGSSIVSTFRFPTLHTLICYGSCEGLICIYCVYSPNIVVNPATKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSNNAWRYVHPASPYRINDYQDPVYSDGSVHWLTEGKESKILSFHLHTETFQVLCEAPFLRERDPVGDSMCILDNRLCVSEINGPAQLIWSLDSSGGNKC", "length": 312, "header": "sp|Q7X7A9-1|FB4_ARATH Isoform 1 of F-box protein At1g11270 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q7X7A9-1" }, "locus": { "chromosome": "1", "start_pos": 3780386, "end_pos": 3787029, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G11270.2", "url": "https://www.ensemblgenomes.org/id/AT1G11270.2" }, { "database": "Ensembl Peptide", "id": "AT1G11270.2", "url": "https://www.ensemblgenomes.org/id/AT1G11270.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": 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"database": "UniProtKB", "id": "Q7X7A9", "url": "https://www.uniprot.org/uniprotkb/Q7X7A9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q7X7A9", "url": "https://www.uniprot.org/uniprotkb/Q7X7A9" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q7X7A9", "url": "https://www.uniprot.org/uniprotkb/Q7X7A9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G11270", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G11270", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q7X7A9", "url": "https://www.uniprot.org/uniprotkb/Q7X7A9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "heat acclimation", "id": "GO:0010286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010286", "evidence": [ { "database": "UniProtKB", "id": "Q7X7A9", "url": "https://www.uniprot.org/uniprotkb/Q7X7A9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 186, "end_pos": 188, "annotation": 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"sp|Q84J62-1|Y2920_ARATH Isoform 1 of UPF0725 protein At2g19200 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q84J62-1" }, "isoforms": [ { "isoform_ac": "Q84J62-1", "url": "https://www.uniprot.org/uniprotkb/Q84J62/entry#Q84J62-1", "sequence": { "sequence": "MLVSLIPELPLENPFQDATDRFYVLPRLIGTVSNMVWPIKILRVAMETTQDLGACDATFYVRYTDSCQARTGEDADRVAIVRRIWDEQFDVFKIVGRTESYRSLGNGESTTSRETVVHCSKDIDSMEQSDMHDGFDGYVGLYSELTNLGSWLVVIHLNMLIRIVNPIAC", "length": 169, "header": "sp|Q84J62-1|Y2920_ARATH Isoform 1 of UPF0725 protein At2g19200 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q84J62-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q84J62", "url": "https://www.uniprot.org/uniprotkb/Q84J62" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants.", "journal": "Plant Physiol.", "date": "2005", "authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q84J62", "url": "https://www.uniprot.org/uniprotkb/Q84J62" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": "https://glygen.org/publication/PubMed/16244158" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q84J62", "url": "https://www.uniprot.org/uniprotkb/Q84J62" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q84J62-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 169, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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"evidence": [ { "database": "iPTMnet", "id": "Q84VP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q84VP8" } ], "site_lbl": "Tyr42" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q84VP8", "url": "https://www.uniprot.org/uniprotkb/Q84VP8" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q84VP8", "url": "https://www.uniprot.org/uniprotkb/Q84VP8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G21130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G21130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "defense response to other organism", "id": "GO:0098542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098542", "evidence": [ { "database": "UniProtKB", "id": "Q84VP8", "url": "https://www.uniprot.org/uniprotkb/Q84VP8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q84VP8", "url": "https://www.uniprot.org/uniprotkb/Q84VP8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q84VP8", "url": "https://www.uniprot.org/uniprotkb/Q84VP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 139, "end_pos": 141, "annotation": "n_glycosylation_sequon" }, { "start_pos": 178, "end_pos": 180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" }, { "start_pos": 88, "end_pos": 90, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": 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"https://www.ncbi.nlm.nih.gov/protein/NP_179373" } ] } ], "protein_names": [ { "name": "F-box protein At2g17830", "type": "recommended", "evidence": [ { "id": "Q84X17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84X17/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_179373", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179373" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84X17", "url": "https://www.uniprot.org/uniprotkb/Q84X17" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q84X17", "locus": {} } ], "crossref": 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"Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G17830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G17830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "THRGMAY", "url": "https://omabrowser.org/oma/group/THRGMAY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q84X17", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q84X17", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_179373", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179373", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G17830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G17830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q84X17", "url": "https://www.uniprot.org/uniprotkb/Q84X17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q84X17-1", "url": "https://www.uniprot.org/uniprotkb/Q84X17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q84X17-2", "url": "https://www.uniprot.org/uniprotkb/Q84X17-2", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAIMSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKEFEVIMMRNFRVYLTSVDLHNDVNPSFTPKGTLTSFSDDANQHQVDNVSSVFHCDGLLLCITKDLNFRLVVWNPYFGQTRWIQPRNSYHIKDIYAIGYDENKNHKILRLKDQYYDYDSHPRARICEFELYSFESNSWKVVLDVSPDWYIHSYHRGLSVKGNTYWYATEKHGYVNFLICFDFTTEKFGPRLPLPFNATESFTYDDVVTLSSVGEEQLALLFQSDATLMMEIWVTSKVDPTEVLWNKLFLAVDHDMIEFDYELKFVADAGSFFIDQKKNVVVVFDKDMNEHTHRGMAYIVGKNGYFKRVDIGEEAYTSCFPLVCSYVPSSVQIRQLT", "length": 394, "header": "sp|Q84X17-1|FB112_ARATH Isoform 1 of F-box protein At2g17830 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q84X17-1" }, "isoforms": [ { "isoform_ac": "Q84X17-1", "url": "https://www.uniprot.org/uniprotkb/Q84X17/entry#Q84X17-1", "sequence": { "sequence": "MAIMSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKEFEVIMMRNFRVYLTSVDLHNDVNPSFTPKGTLTSFSDDANQHQVDNVSSVFHCDGLLLCITKDLNFRLVVWNPYFGQTRWIQPRNSYHIKDIYAIGYDENKNHKILRLKDQYYDYDSHPRARICEFELYSFESNSWKVVLDVSPDWYIHSYHRGLSVKGNTYWYATEKHGYVNFLICFDFTTEKFGPRLPLPFNATESFTYDDVVTLSSVGEEQLALLFQSDATLMMEIWVTSKVDPTEVLWNKLFLAVDHDMIEFDYELKFVADAGSFFIDQKKNVVVVFDKDMNEHTHRGMAYIVGKNGYFKRVDIGEEAYTSCFPLVCSYVPSSVQIRQLT", "length": 394, "header": "sp|Q84X17-1|FB112_ARATH Isoform 1 of F-box protein At2g17830 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q84X17-1" }, "locus": { "chromosome": "2", "start_pos": 7754048, "end_pos": 7755604, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G17830.1", "url": "https://www.ensemblgenomes.org/id/AT2G17830.1" }, { "database": "Ensembl Peptide", "id": "AT2G17830.1", "url": "https://www.ensemblgenomes.org/id/AT2G17830.1" } ] } }, { "isoform_ac": "Q84X17-2", "url": "https://www.uniprot.org/uniprotkb/Q84X17/entry#Q84X17-2", "sequence": { "sequence": "MAIMSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKEFEVIMMRNFRVYLTSVDLHNDVNPSFTPKVLEKNSLRCCFRVMLH", "length": 105, "header": "sp|Q84X17-2|FB112_ARATH Isoform 2 of F-box protein At2g17830 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q84X17-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", 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"MDDCSKDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSSKILKRLTLYCAHSSRNPKSVSFDTPNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATDLLMGICNVKTLYLSYDTLETLNLCCQVIPVFNNLTHLTIESHPELGWESLPNLLKSCPNLGTLVFQGLLHKATDRCGDVCMCQGLENSHSCLSSSPVKCLKILKFGETNDDDDMEIEMEQIKNFLEKMPNLEQLIIYYESSIDNDLVRVSSQLQEVPTVASLKCKIQVISDNLSLSSTLPISLSMENGFHL", "length": 484, "header": "sp|Q8GW80-1|FBL65_ARATH Isoform 1 of F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GW80-1" }, "isoforms": [ { "isoform_ac": "Q8GW80-1", "url": "https://www.uniprot.org/uniprotkb/Q8GW80/entry#Q8GW80-1", "sequence": { "sequence": "MDDCSKDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCGDGIEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSSKILKRLTLYCAHSSRNPKSVSFDTPNVVYFEYSDNIANKYPKVNFDSLVEASIGIRMTKVQKANARYVSDVDEETEMVGNATDLLMGICNVKTLYLSYDTLETLNLCCQVIPVFNNLTHLTIESHPELGWESLPNLLKSCPNLGTLVFQGLLHKATDRCGDVCMCQGLENSHSCLSSSPVKCLKILKFGETNDDDDMEIEMEQIKNFLEKMPNLEQLIIYYESSIDNDLVRVSSQLQEVPTVASLKCKIQVISDNLSLSSTLPISLSMENGFHL", "length": 484, "header": "sp|Q8GW80-1|FBL65_ARATH Isoform 1 of F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GW80-1" }, "locus": { "chromosome": "3", "start_pos": 21889476, "end_pos": 21891944, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59210.3", "url": "https://www.ensemblgenomes.org/id/AT3G59210.3" }, { "database": "Ensembl Peptide", "id": "AT3G59210.3", "url": "https://www.ensemblgenomes.org/id/AT3G59210.3" } ] } } ], 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Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q8GW80", "url": "https://www.uniprot.org/uniprotkb/Q8GW80" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q8GW80", "url": "https://www.uniprot.org/uniprotkb/Q8GW80" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q8GWI2", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q8GWI2", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191563", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191563", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LM00", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM00-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM00-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM01-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM01-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM02", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM02-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM02-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM03", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM03-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM03-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GWI2-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKVT", "length": 449, "header": "sp|Q8GWI2-1|FBL69_ARATH Isoform 1 of F-box/LRR-repeat protein At3g60040 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GWI2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LM00-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2/entry#A0A1I9LM00-1", "sequence": { "sequence": "MGIGWSLHNRDGTQILHGSGAIHPTQSPTEAEAEALRLAVLDLRRLGYSHVTFCGDLKLIYDTLQRCALRGNNASWKYLHIATYLADVLKISKLCSFNFIHISRDANDIADRLAKQARCNGLDYVICWTSSSLVLNVKQRNYVTDIYNDVNNISSINAFQDLAGSLDELKTTSFIVVLTFWVCFLIKTPIKFRIEGTTPSFSGSVFALLHDSVSGTFISMDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKVT", "length": 668, "header": "tr|A0A1I9LM00-1|A0A1I9LM00_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q8GWI2-1" }, "locus": { "chromosome": "3", "start_pos": 22175852, "end_pos": 22179728, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60040.2", "url": "https://www.ensemblgenomes.org/id/AT3G60040.2" }, { "database": "Ensembl Peptide", "id": "AT3G60040.2", "url": "https://www.ensemblgenomes.org/id/AT3G60040.2" } ] } }, { "isoform_ac": "A0A1I9LM01-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2/entry#A0A1I9LM01-1", "sequence": { "sequence": "MGIGWSLHNRDGTQILHGSGAIHPTQSPTEAEAEALRLAVLDLRRLGYSHVTFCGDLKLIYDTLQRCALRGNNASWKYLHIATYLADVLKISKLCSFNFIHISRDANDIADRLAKQARCNGLDYVICWTSSSLVLNVKQRNYVTDIYNDVNNISSINAFQDLAGSLDELKTTSFIVVLTFWVCFLIKTPIKFRIEGTTPSFSGSVFALLHDSAVSGTFISMDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKSVLDELNVRVSGILVIGVLDGTQLLLIILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR", "length": 839, "header": "tr|A0A1I9LM01-1|A0A1I9LM01_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q8GWI2-1" }, "locus": { "chromosome": "3", "start_pos": 22175937, "end_pos": 22179728, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60040.3", "url": "https://www.ensemblgenomes.org/id/AT3G60040.3" }, { "database": "Ensembl Peptide", "id": "AT3G60040.3", "url": "https://www.ensemblgenomes.org/id/AT3G60040.3" } ] } }, { "isoform_ac": "A0A1I9LM02-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2/entry#A0A1I9LM02-1", "sequence": { "sequence": "MDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKSVLDELNVRVSGILVIGVLDGTQLLLIILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR", "length": 619, "header": "tr|A0A1I9LM02-1|A0A1I9LM02_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q8GWI2-1" }, "locus": { "chromosome": "3", "start_pos": 22175937, "end_pos": 22178311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60040.4", "url": "https://www.ensemblgenomes.org/id/AT3G60040.4" }, { "database": "Ensembl Peptide", "id": "AT3G60040.4", "url": "https://www.ensemblgenomes.org/id/AT3G60040.4" } ] } }, { "isoform_ac": "A0A1I9LM03-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2/entry#A0A1I9LM03-1", "sequence": { "sequence": "MGIGWSLHNRDGTQILHGSGAIHPTQSPTEAEAEALRLAVLDLRRLGYSHVTFCGDLKLIYDTLQRCALRGNNASWKYLHIATYLADVLKISKLCSFNFIHISRDANDIADRLAKQARCNGLDYVICWTSSSLVLNVKQRNYVTDIYNDVNNISSINAFQDLAGSLDELKTTSFIVVLTFWVCFLIKTPIKFRIEGTTPSFSGSVFALLHDSGTFISMDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKVT", "length": 666, "header": "tr|A0A1I9LM03-1|A0A1I9LM03_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q8GWI2-1" }, "locus": { "chromosome": "3", "start_pos": 22176660, "end_pos": 22179728, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60040.5", "url": "https://www.ensemblgenomes.org/id/AT3G60040.5" }, { "database": "Ensembl Peptide", "id": "AT3G60040.5", "url": "https://www.ensemblgenomes.org/id/AT3G60040.5" } ] } }, { "isoform_ac": "Q8GWI2-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2/entry#Q8GWI2-1", "sequence": { "sequence": "MDAKMFDTICSRDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLELDDSFSLQAVKDQTPGLRKHVRFVFTEDFKIFVDRTLALQCDYPIKNFSLKCHVSKYDERQKACVGRWISNVVGRGVFELDLRMKDPGIHFLPPHLVASKTLVKLTLGTQLCLGQLPSYVSLPSLKSLFIDTIVFYDIEDLCCVLLAGCPVLEELSVHHHDFIATPHTISSPTLKRLSVDYHCPDDVDSASHMSFDLPKLVYLEYSHCALGEYWQINLESLVEAKLDLGLERKVLRMDVTDLIIGIRNVQSLHLSPDSVHVIYSYCRHGLPVFKNLVNLSFGSKNKRGWRLLANLLKQSTKLETLIVKDLNGYTGDVSMPLNKVTSLHILGYRGTADEVKQLKSFIGEFECLELVQVDVAEAAEDNGKILQSKRDLMMLLGVSLPSKCQFKVT", "length": 449, "header": "sp|Q8GWI2-1|FBL69_ARATH Isoform 1 of F-box/LRR-repeat protein At3g60040 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GWI2-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "Q8GWI2", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q8GWI2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 449, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q8GWI2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q8GWI2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q8GWI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GWI2" }, { "id": "PRU00080", "database": "PROSITE", "url": 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"https://www.uniprot.org/uniprotkb/Q8GWR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GWR2-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKAVHSSTTSGPAVPGETTKTGTSIIDTAASAVQSFAPVNQIHQHLCAFHFYADDMARQVEAHHFCSHVNEEMRQCLIYDGPDANARLIGLEYIVSEKLFMTLPDEEKKLWHSHEWEVKGGFLFMPGVPGAIQRKDLDKVAKTYGKVFHFWQVDLGHELPIGLPNVMMAVTRDGQLFHEMIQEAEKRFGVSVEGERDSRAYMSGPELGIHPLANGGGKGMKLELREVDIKPVESVGSVFV", "length": 241, "header": "sp|Q8GWR2-1|OBP1B_ARATH Isoform 1 of Oil body-associated protein 1B OS=Arabidopsis thaliana OX=3702 GN=OBAP1B PE=1 SV=1 CANONICAL=Q8GWR2-1" }, "isoforms": [ { "isoform_ac": "Q8GWR2-1", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2/entry#Q8GWR2-1", "sequence": { "sequence": "MEKAVHSSTTSGPAVPGETTKTGTSIIDTAASAVQSFAPVNQIHQHLCAFHFYADDMARQVEAHHFCSHVNEEMRQCLIYDGPDANARLIGLEYIVSEKLFMTLPDEEKKLWHSHEWEVKGGFLFMPGVPGAIQRKDLDKVAKTYGKVFHFWQVDLGHELPIGLPNVMMAVTRDGQLFHEMIQEAEKRFGVSVEGERDSRAYMSGPELGIHPLANGGGKGMKLELREVDIKPVESVGSVFV", "length": 241, "header": "sp|Q8GWR2-1|OBP1B_ARATH Isoform 1 of Oil body-associated protein 1B OS=Arabidopsis thaliana OX=3702 GN=OBAP1B PE=1 SV=1 CANONICAL=Q8GWR2-1" }, "locus": { "chromosome": "2", "start_pos": 13613928, "end_pos": 13615692, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G31985.1", "url": "https://www.ensemblgenomes.org/id/AT2G31985.1" }, { "database": "Ensembl Peptide", "id": "AT2G31985.1", "url": "https://www.ensemblgenomes.org/id/AT2G31985.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii 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Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants.", "journal": "Mol. Cell. Proteomics", "date": "2007", "authors": "Maor Rudy, Jones Alex, N\u00fchse Thomas S, Studholme David J, Peck Scott C, Shirasu Ken", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "reference": [ { "type": "PubMed", "id": "17272265", "url": "https://glygen.org/publication/PubMed/17272265" } ] }, { "title": "The evolutionary conserved oil body associated protein OBAP1 participates in the regulation of oil body size.", "journal": "Plant Physiol.", "date": "2014", "authors": "L\u00f3pez-Ribera Ignacio, La Paz Jos\u00e9 Luis, Repiso Carlos, Garc\u00eda Nora, Miquel Merc\u00e8, Hern\u00e1ndez Mar\u00eda Luisa, Mart\u00ednez-Rivas Jos\u00e9 Manuel, Vicient Carlos M", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "reference": [ { "type": "PubMed", "id": "24406791", "url": "https://glygen.org/publication/PubMed/24406791" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G31985", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G31985", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lipid storage", "id": "GO:0019915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019915", "evidence": [ { "database": "UniProtKB", "id": "Q8GWR2", "url": "https://www.uniprot.org/uniprotkb/Q8GWR2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q8GWR2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 241, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q8GWR2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q8GWR2" } ], "lectin_list": [], 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"MDPNMMIVKTLSETDCSHDNKLILPRDKVENIVRSTGVPVPRMGIQVEILDNTNSYWVNLRQSQRGYFIGRGWGELRDARNLKAGDVIKLYWQNTKFIFSM", "length": 101, "header": "sp|Q8GWU1-1|Y1898_ARATH Isoform 1 of B3 domain-containing protein At1g08985 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=2 CANONICAL=Q8GWU1-1" }, "locus": { "chromosome": "1", "start_pos": 2887245, "end_pos": 2887706, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G08985.1", "url": "https://www.ensemblgenomes.org/id/AT1G08985.1" }, { "database": "Ensembl Peptide", "id": "AT1G08985.1", "url": "https://www.ensemblgenomes.org/id/AT1G08985.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 95, "end_pos": 95, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GWU1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GWU1" }, { "database": "PubMed", "id": "22074104", "url": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q8GXW6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q8GXW6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001319795", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319795", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GXW6", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GXW6-1", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFVDFVDRVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFIDFSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGTSLPMLKSLYIDSDLILWGKMKRFLSSFPVLEELRMASMEWKESHETVSSASLRKLSILGTGCEDYVNPKSISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLIVKDDQIKRVREPNNDLLQDDAGNVVLQFGNVVKLMNGIQNIQILYLTADTLEVLSLCCESMPVFNNLKTLGIKSEEGRGWQAVPALLRNCPHLEYLIIEGLLHNVTDKCGDACDCISREDKGRSLASCPVKKVEIQGFRGTMREINMIGHFLRSFKCLKEMGIFPEEEGPTNFENPGAFEYVEKILKLYNEISNCDVYFLVWGYMRRKWTTQ", "length": 482, "header": "sp|Q8GXW6-1|FBL59_ARATH Isoform 1 of F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GXW6-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNJ8-1", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6/entry#A0A1I9LNJ8-1", "sequence": { "sequence": "MDRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFVDFVDRVLALQDDSPIDRFSLKCITEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGTSLPMLKSLYIDSDLILWGKMKRFLSSFPVLEELRMASMEWKESHETVSSASLRKLSILGTGCEDYVNPKSISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLIVKDDQIKRVREPNNDLLQDDAGNVVLQFGNVVKLMNGIQNIQILYLTADTLEVLSLCCESMPVFNNLKTLGIKSEEGRGWQAVPALLRNCPHLEYLIIEGLLHNVTDKCGDACDCISREDKGRSLASCPVKKVEIQGFRGTMREINMIGHFLRSFKCLKEMGIFPEEEGPTNFENPGAFEYVEKILKLYNEISNCDVYFLVWGYMRRKWTTQ", "length": 448, "header": "tr|A0A1I9LNJ8-1|A0A1I9LNJ8_ARATH Computationally mapped isoform of F-box/RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q8GXW6-1" }, "locus": { "chromosome": "3", "start_pos": 21778164, "end_pos": 21780433, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58930.2", "url": "https://www.ensemblgenomes.org/id/AT3G58930.2" }, { "database": "Ensembl Peptide", "id": "AT3G58930.2", "url": "https://www.ensemblgenomes.org/id/AT3G58930.2" } ] } }, { "isoform_ac": "Q8GXW6-1", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6/entry#Q8GXW6-1", "sequence": { "sequence": "MDRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFVDFVDRVLALQDDSPIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFIDFSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGTSLPMLKSLYIDSDLILWGKMKRFLSSFPVLEELRMASMEWKESHETVSSASLRKLSILGTGCEDYVNPKSISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLIVKDDQIKRVREPNNDLLQDDAGNVVLQFGNVVKLMNGIQNIQILYLTADTLEVLSLCCESMPVFNNLKTLGIKSEEGRGWQAVPALLRNCPHLEYLIIEGLLHNVTDKCGDACDCISREDKGRSLASCPVKKVEIQGFRGTMREINMIGHFLRSFKCLKEMGIFPEEEGPTNFENPGAFEYVEKILKLYNEISNCDVYFLVWGYMRRKWTTQ", "length": 482, "header": "sp|Q8GXW6-1|FBL59_ARATH Isoform 1 of F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GXW6-1" }, "locus": { "chromosome": "3", "start_pos": 21778174, "end_pos": 21780663, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58930.5", "url": "https://www.ensemblgenomes.org/id/AT3G58930.5" }, { "database": "Ensembl Peptide", "id": "AT3G58930.5", "url": "https://www.ensemblgenomes.org/id/AT3G58930.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q8GXW6", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q8GXW6", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q8GXW6", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q8GXW6", "url": "https://www.uniprot.org/uniprotkb/Q8GXW6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G58930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 245, "end_pos": 247, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q8GXW6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 482, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q8GXW6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q8GXW6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 245, "end_pos": 247 }, { "start_pos": 374, "end_pos": 376 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q8GXX4-1", "uniprot_ac": "Q8GXX4", "uniprot_id": "FK133_ARATH", "mass": { "chemical_mass": 41526.0, "monoisotopic_mass": 41526.0 }, "refseq": { "ac": "NP_849387", "name": "Galactose oxidase/kelch repeat superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849387" }, "gene_names": [ { "name": "FCAALL", "type": "synonym", "evidence": [ { "id": "Q8GXX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ] } ], "protein_names": [ { "name": "F-box/kelch-repeat protein At4g14905", "type": "recommended", "evidence": [ { "id": "Q8GXX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4/entry#names_and_taxonomy" } ] }, { "name": "Galactose oxidase/kelch repeat superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_849387", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849387" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4", "locus": {} } ], "crossref": [ { "id": "Q8GXX4", "url": "https://alphafold.ebi.ac.uk/entry/Q8GXX4", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G14905", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G14905", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22152", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22152", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "827148", "url": "https://www.ncbi.nlm.nih.gov/gene/827148", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050354", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050354", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G14905", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G14905", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ASPEIYI", "url": "https://omabrowser.org/oma/group/ASPEIYI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q8GXX4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q8GXX4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_849387", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849387", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G14905", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G14905", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GXX4-1", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRSAASSVGSITGESPQKKLLQSASSSSSLAILHDEIAVSCFARVPRCYYPAISLVCRNFRRLMASPEIYIERSVIRRTENILYVAIRSEATKTLSWYTLNLKPFGTTEISHRLVPVPSFPSIPGYGTTIISSGSETYVIGGCIDGELVSTVSVIDCRSHTCRFLPNMKEPRKCAAVGLIDGKLYVVGGCNAPSLSWVEVFNFKKRTWESVLSLDNVDMDEQMNFFVMNDKIYRIGQNTMFVYDPKKGRFEEDLALGRLWFNESCPIDNVLYGFYCMNQILAYDLVVGMGTVFWGLEGLPEGLQSCTGRMVNHGGRLAILFKKSPTEIWRTEIAIERAEEGGYISGKFLWSNHVLTLTDSFIIERALAVTV", "length": 372, "header": "sp|Q8GXX4-1|FK133_ARATH Isoform 1 of F-box/kelch-repeat protein At4g14905 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GXX4-1" }, "isoforms": [ { "isoform_ac": "Q8GXX4-1", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4/entry#Q8GXX4-1", "sequence": { "sequence": "MSRSAASSVGSITGESPQKKLLQSASSSSSLAILHDEIAVSCFARVPRCYYPAISLVCRNFRRLMASPEIYIERSVIRRTENILYVAIRSEATKTLSWYTLNLKPFGTTEISHRLVPVPSFPSIPGYGTTIISSGSETYVIGGCIDGELVSTVSVIDCRSHTCRFLPNMKEPRKCAAVGLIDGKLYVVGGCNAPSLSWVEVFNFKKRTWESVLSLDNVDMDEQMNFFVMNDKIYRIGQNTMFVYDPKKGRFEEDLALGRLWFNESCPIDNVLYGFYCMNQILAYDLVVGMGTVFWGLEGLPEGLQSCTGRMVNHGGRLAILFKKSPTEIWRTEIAIERAEEGGYISGKFLWSNHVLTLTDSFIIERALAVTV", "length": 372, "header": "sp|Q8GXX4-1|FK133_ARATH Isoform 1 of F-box/kelch-repeat protein At4g14905 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GXX4-1" }, "locus": { "chromosome": "4", "start_pos": 8526358, "end_pos": 8528010, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G14905.2", "url": "https://www.ensemblgenomes.org/id/AT4G14905.2" }, { "database": "Ensembl Peptide", "id": "AT4G14905.2", "url": "https://www.ensemblgenomes.org/id/AT4G14905.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana.", "journal": "Nature", "date": "1998", "authors": "Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W, Van Staveren M, Stiekema W, Drost L, Ridley P, Hudson S A, Patel K, Murphy G, Piffanelli P, Wedler H, Wedler E, Wambutt R, Weitzenegger T, Pohl T M, Terryn N, Gielen J, Villarroel R, De Clerck R, Van Montagu M, Lecharny A, Auborg S, Gy I, Kreis M, Lao N, Kavanagh T, Hempel S, Kotter P, Entian K D, Rieger M, Schaeffer M, Funk B, Mueller-Auer S, Silvey M, James R, Montfort A, Pons A, Puigdomenech P, Douka A, Voukelatou E, Milioni D, Hatzopoulos P, Piravandi E, Obermaier B, Hilbert H, D\u00fcsterh\u00f6ft A, Moores T, Jones J D, Eneva T, Palme K, Benes V, Rechman S, Ansorge W, Cooke R, Berger C, Delseny M, Voet M, Volckaert G, Mewes H W, Klosterman S, Schueller C, Chalwatzis N", "evidence": [ { "database": "UniProtKB", "id": "Q8GXX4", "url": "https://www.uniprot.org/uniprotkb/Q8GXX4" } ], "reference": [ { "type": "PubMed", "id": "9461215", "url": "https://glygen.org/publication/PubMed/9461215" } ] } ], "pathway": [ { "id": "ath:AT4G14905", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G14905", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q8GXX4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 372, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q8GXX4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q8GXX4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 263, "end_pos": 265 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"crossref": [ { "id": "Q8GYA8", "url": "https://alphafold.ebi.ac.uk/entry/Q8GYA8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G58975", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G58975", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PR:Q8GYA8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q8GYA8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT3G58975", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58975", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q8GYA8", "url": "https://www.uniprot.org/uniprotkb/Q8GYA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q8GYA8-1", "url": "https://www.uniprot.org/uniprotkb/Q8GYA8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKALFEARINFIVTEKQIKRVRAPNEDWLQDDEVDVVLRFSNVVKLMNGIQNVQKLYLTADTIEVLSLCCESVPLFNNLKTLGITSEEGRGWQAMPVLGLLHYMTDKCGDACDCISREDKGRSLTSCPVKKLEIRGFRGTMKEMTMIKHFLVYFPCLKEMNIYVEEYDPTELRFPQVSKVIIQMMEEYNKLSSCNVQLLITDYLSEKWTAAGRIL", "length": 215, "header": "sp|Q8GYA8-1|Y3975_ARATH Isoform 1 of FBD domain-containing protein At3g58975 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GYA8-1" }, "isoforms": [ { "isoform_ac": "Q8GYA8-1", "url": "https://www.uniprot.org/uniprotkb/Q8GYA8/entry#Q8GYA8-1", "sequence": { "sequence": "MKALFEARINFIVTEKQIKRVRAPNEDWLQDDEVDVVLRFSNVVKLMNGIQNVQKLYLTADTIEVLSLCCESVPLFNNLKTLGITSEEGRGWQAMPVLGLLHYMTDKCGDACDCISREDKGRSLTSCPVKKLEIRGFRGTMKEMTMIKHFLVYFPCLKEMNIYVEEYDPTELRFPQVSKVIIQMMEEYNKLSSCNVQLLITDYLSEKWTAAGRIL", "length": 215, "header": "sp|Q8GYA8-1|Y3975_ARATH Isoform 1 of FBD domain-containing protein At3g58975 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q8GYA8-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, 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"MVPWLMVSAIQVVELSVSSVVHMFYGLYIFSSAVAGDLTQSLSESIFKPKSTIEVKQIDQEKTTDVNDLPPIVLVHGIFGFGKGRLGGLSYFAGAEKKDERVLVPDLGSLTSVHDRARELFYYLKGGLVDYGEEHSKACGHSQFGRFYEKGEYQEWDEDHPIHFVGHSAGAQVVRVLQQMLADKMFEGYENTNENWVLSLTSLSGALNGTTRTYIDGIQPEDGKSLKPISLLQICKLGVIMYDWIDIPWLKSYYNFGFDHFNMSRKKTGVRGLVDLLLGNAGPFAACGDWILPDLSIQGSMTLNASLQTFPNTFYFSYATKRTTKPLGMMTVPSGVMGIHPLLFIRVLQMSQWQFPRDIPLPYKGYRDEDWQDNDGALNTISMTHPRIPVEHSSLILRSDSDCLPLQPGIWYYKIVEADHIMFIINRERAGVEFDLIYDSIFERCRKHVFRKAPQTLPNEAQHQERGGQEE", "length": 471, "header": "tr|Q9LR26-1|Q9LR26_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LR26-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AVN0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR26/entry#A0A1P8AVN0-1", "sequence": { "sequence": "MVPWLMVSAIQVVELSVSSVVHMFYGLYIFSSAVAGDLTQSLSESIFKPKSTIEVKQIDQEKTTDVNDLPPIVLVHGIFGFGKGRLGGLSYFAGAEKKDERVLVPDLGSLTSVHDRARELFYYLKGGLVDYGEEHSKACGHSQFGRFYEKGEYQEWDEDHPIHFVGHSAGAQVVRVLQQMLADKMFEGYENTNENWVLSLTSLSGALNGTTRTYIDGIQPEDGKSLKPISLLQICKLGVIMYDWIDIPWLKSYYNFGFDHFNMSRKKTGVRGLVDLLLGNAGPFAACGDWILPDLSIQGSMTLNASLQTFPNTFYFSYATKRTTKPLGMMTVPSGVMGIHPLLFIRVLQMSQWQFPRDIPLPYKGYRSDFLNFVSPLKATPYYINLLFKFGITEMKIGRTMMEH", "length": 404, "header": "tr|A0A1P8AVN0-1|A0A1P8AVN0_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LR26-1" }, "locus": { "chromosome": "1", "start_pos": 8279588, "end_pos": 8282421, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G23330.2", "url": "https://www.ensemblgenomes.org/id/AT1G23330.2" }, { "database": "Ensembl Peptide", "id": "AT1G23330.2", "url": "https://www.ensemblgenomes.org/id/AT1G23330.2" } ] } }, { "isoform_ac": "Q9LR26-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR26/entry#Q9LR26-1", "sequence": { "sequence": "MVPWLMVSAIQVVELSVSSVVHMFYGLYIFSSAVAGDLTQSLSESIFKPKSTIEVKQIDQEKTTDVNDLPPIVLVHGIFGFGKGRLGGLSYFAGAEKKDERVLVPDLGSLTSVHDRARELFYYLKGGLVDYGEEHSKACGHSQFGRFYEKGEYQEWDEDHPIHFVGHSAGAQVVRVLQQMLADKMFEGYENTNENWVLSLTSLSGALNGTTRTYIDGIQPEDGKSLKPISLLQICKLGVIMYDWIDIPWLKSYYNFGFDHFNMSRKKTGVRGLVDLLLGNAGPFAACGDWILPDLSIQGSMTLNASLQTFPNTFYFSYATKRTTKPLGMMTVPSGVMGIHPLLFIRVLQMSQWQFPRDIPLPYKGYRDEDWQDNDGALNTISMTHPRIPVEHSSLILRSDSDCLPLQPGIWYYKIVEADHIMFIINRERAGVEFDLIYDSIFERCRKHVFRKAPQTLPNEAQHQERGGQEE", "length": 471, "header": "tr|Q9LR26-1|Q9LR26_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LR26-1" }, "locus": { "chromosome": "1", "start_pos": 8279554, "end_pos": 8282416, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G23330.1", "url": "https://www.ensemblgenomes.org/id/AT1G23330.1" }, { "database": "Ensembl Peptide", "id": "AT1G23330.1", "url": "https://www.ensemblgenomes.org/id/AT1G23330.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9LR26", "url": "https://www.uniprot.org/uniprotkb/Q9LR26" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LR26", "url": "https://www.uniprot.org/uniprotkb/Q9LR26" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G23330", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G23330", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LR26", "url": "https://www.uniprot.org/uniprotkb/Q9LR26" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 208, "end_pos": 210, "annotation": "n_glycosylation_sequon" }, { "start_pos": 262, "end_pos": 264, "annotation": "n_glycosylation_sequon" }, { "start_pos": 304, "end_pos": 306, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LR26", "database": 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"uniprot_id": "Q9LR35_ARATH", "mass": { "chemical_mass": 19288.0, "monoisotopic_mass": 19288.0 }, "refseq": {}, "gene_names": [ { "name": "F26F24.11", "type": "synonym", "evidence": [ { "id": "Q9LR35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR35" } ] }, { "name": "F26F24_11", "type": "synonym", "evidence": [ { "id": "Q9LR35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR35" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LR35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR35/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LR35", "url": "https://www.uniprot.org/uniprotkb/Q9LR35" } ], "common_name": "Mouse-ear cress", "glygen_name": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { 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"function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LR41", "url": "https://www.uniprot.org/uniprotkb/Q9LR41" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LR41", "locus": {} } ], "crossref": [ { "id": "6240274", "url": "https://www.ncbi.nlm.nih.gov/gene/6240274", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR012891", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012891", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G23201", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G23201", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKESWMA", "url": "https://omabrowser.org/oma/group/CKESWMA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4I4N9", "url": "https://www.orthodb.org/?gene=F4I4N9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LR41", "url": "https://www.orthodb.org/?gene=Q9LR41", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34357", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34357", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34357:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34357:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07802", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07802", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001320723", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320723", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G23201", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G23201", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4I4N9", "url": "https://www.uniprot.org/uniprotkb/F4I4N9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4I4N9-1", "url": "https://www.uniprot.org/uniprotkb/F4I4N9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LR41", "url": "https://www.uniprot.org/uniprotkb/Q9LR41", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LR41-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR41-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKSDYLSYGIGIMSSTDLKPESKPENNQVSSKPKPVRGRYHVFMKEGGCEESYTAFVGRDVQKDTCREAYSMVEKCMKARSDYFERFLALQNARAEVMQREIDAFLHAKPKDRDEMFTKFMTRGACKEAFMAWIDFCKESRKNNKSCRHNPAMDTMLKCVKAHSDYYHPLLTVFKAGEEHHKKEIDALNMREQTEADAKG", "length": 200, "header": "tr|Q9LR41-1|Q9LR41_ARATH Isoform 1 of GCK domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LR41-1" }, "isoforms": [ { "isoform_ac": "F4I4N9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR41/entry#F4I4N9-1", "sequence": { "sequence": "MSSTDLKPESKPENNQVSSKPKPVRGRYHVFMKEGGCEESYTAFVGRDVQKDTCREAYSMVEKCMKARSDYFERFLALQNARAEVMQREIDAFLHAKPKDRDEMFTKFMTRGACKEAFMAWIDFCKESRKNNKSCRHNPAMDTMLKCVKAHSDYYHPLLTVFKAGEEHHKKEIDALNMREQTEADAKG", "length": 188, "header": "tr|F4I4N9-1|F4I4N9_ARATH Computationally mapped isoform of GCK domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LR41-1" }, "locus": { "chromosome": "1", "start_pos": 8230209, "end_pos": 8230791, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G23201.1", "url": "https://www.ensemblgenomes.org/id/AT1G23201.1" }, { "database": "Ensembl Peptide", "id": "AT1G23201.1", "url": "https://www.ensemblgenomes.org/id/AT1G23201.1" } ] } }, { "isoform_ac": "Q9LR41-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR41/entry#Q9LR41-1", "sequence": { "sequence": "MKSDYLSYGIGIMSSTDLKPESKPENNQVSSKPKPVRGRYHVFMKEGGCEESYTAFVGRDVQKDTCREAYSMVEKCMKARSDYFERFLALQNARAEVMQREIDAFLHAKPKDRDEMFTKFMTRGACKEAFMAWIDFCKESRKNNKSCRHNPAMDTMLKCVKAHSDYYHPLLTVFKAGEEHHKKEIDALNMREQTEADAKG", "length": 200, "header": "tr|Q9LR41-1|Q9LR41_ARATH Isoform 1 of GCK domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LR41-1" }, "locus": { "chromosome": "1", "start_pos": 8230047, "end_pos": 8230978, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G23201.2", "url": "https://www.ensemblgenomes.org/id/AT1G23201.2" }, { "database": "Ensembl Peptide", "id": "AT1G23201.2", "url": "https://www.ensemblgenomes.org/id/AT1G23201.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9LR41", "url": "https://www.uniprot.org/uniprotkb/Q9LR41" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LR41", "url": "https://www.uniprot.org/uniprotkb/Q9LR41" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G23201", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G23201", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LR41", "url": "https://www.uniprot.org/uniprotkb/Q9LR41" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LR41", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR41" }, { "id": "SM01227", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01227" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GCK", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 102, "start_aa": "Val", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 144, "end_pos": 146 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LR55-1", "uniprot_ac": "Q9LR55", "uniprot_id": "Q9LR55_ARATH", "mass": { "chemical_mass": 30905.0, "monoisotopic_mass": 30905.0 }, "refseq": {}, "gene_names": [ { "name": "F21B7.32", "type": "synonym", "evidence": [ { "id": "Q9LR55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR55" } ] } ], "protein_names": [ { "name": "Cysteine proteinases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9LR55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LR55/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LR55", "url": "https://www.uniprot.org/uniprotkb/Q9LR55" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LR55", "locus": {} } ], "crossref": [ { "id": "AT1G03720", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G03720", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd02619", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02619", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "839426", "url": "https://www.ncbi.nlm.nih.gov/gene/839426", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000668", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000668", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013128", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013128", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G03720", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G03720", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NCNIEIC", "url": "https://omabrowser.org/oma/group/NCNIEIC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12411", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12411", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00112", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00112", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G03720", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G03720", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8ASQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8ASQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LR55", "url": "https://www.uniprot.org/uniprotkb/Q9LR55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LR55-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR55-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLDFFSFVGNGEKRAIHWWQTYKAPKVPNEIKREAATAKKKGPTITPVTQTDDNGVRSKLCYLNCNSYKIEICWAIALTRLLQVIYNITQEYIAGRLRFDHDDLVVHLKMKKTRGKRPGSMKLKNLKDAINHIAVKGLLKKRESKSKAGSDIGHHTKWNFSMEKCPSKDFIKSKVDISPVAIAFDITHNFQFIGNVSKKSNGLSIYNVSGVDMEDGDAGGHVVLIVGYGYTKENKLFFLIQNSWGEDWGVKGFGRIFIDDESKTTLVYPDGPV", "length": 274, "header": "tr|Q9LR55-1|Q9LR55_ARATH Isoform 1 of Cysteine proteinases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LR55-1" }, "isoforms": [ { "isoform_ac": "A0A1P8ASQ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR55/entry#A0A1P8ASQ4-1", "sequence": { "sequence": "MVLDFFSFVGNGEKRAIHWWQTYKAPKVPNEIKREAATAKKKGPTITPVTQTDDNGVRSKLCYLNCNSYKIEICWAIALTRLLQVIYNITQEYIAGRLRFDHDDLVVHLKMKKTRGKRPGSMKLKNLKDAINHIAVKGLLKKRESKSKAGSDIGHHTKWNFSMEKCPSKDFIKSKVDISPVAIAFDITHNFQFIGNSIYNVSGVDMEDGDAGGHVVLIVGYGYTKENKLFFLIQNSWGEDWGVKGFGRIFIDDESKTTLVYPDGPV", "length": 266, "header": "tr|A0A1P8ASQ4-1|A0A1P8ASQ4_ARATH Computationally mapped isoform of Cysteine proteinases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LR55-1" }, "locus": { "chromosome": "1", "start_pos": 924896, "end_pos": 926373, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G03720.2", "url": "https://www.ensemblgenomes.org/id/AT1G03720.2" }, { "database": "Ensembl Peptide", "id": "AT1G03720.2", "url": "https://www.ensemblgenomes.org/id/AT1G03720.2" } ] } }, { "isoform_ac": "Q9LR55-1", "url": "https://www.uniprot.org/uniprotkb/Q9LR55/entry#Q9LR55-1", "sequence": { "sequence": "MVLDFFSFVGNGEKRAIHWWQTYKAPKVPNEIKREAATAKKKGPTITPVTQTDDNGVRSKLCYLNCNSYKIEICWAIALTRLLQVIYNITQEYIAGRLRFDHDDLVVHLKMKKTRGKRPGSMKLKNLKDAINHIAVKGLLKKRESKSKAGSDIGHHTKWNFSMEKCPSKDFIKSKVDISPVAIAFDITHNFQFIGNVSKKSNGLSIYNVSGVDMEDGDAGGHVVLIVGYGYTKENKLFFLIQNSWGEDWGVKGFGRIFIDDESKTTLVYPDGPV", "length": 274, "header": "tr|Q9LR55-1|Q9LR55_ARATH Isoform 1 of Cysteine proteinases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LR55-1" }, "locus": { "chromosome": 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Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9LR83", "url": "https://www.uniprot.org/uniprotkb/Q9LR83" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the 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"url": "https://www.uniprot.org/uniprotkb/Q9LRJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLCYVGKATKIFIFIVTVVFVIGLVVAFGVLRRHSHHCSGDYCSSSTDPSSSSSSSSSSTSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPSTPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASPPLTPPSSVVTSPAPVHAKLVND", "length": 178, "header": "tr|Q9LRJ8-1|Q9LRJ8_ARATH Isoform 1 of Proline-rich family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LRJ8-1" }, "isoforms": [ { "isoform_ac": "Q9LRJ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRJ8/entry#Q9LRJ8-1", "sequence": { "sequence": "MLCYVGKATKIFIFIVTVVFVIGLVVAFGVLRRHSHHCSGDYCSSSTDPSSSSSSSSSSTSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPSTPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASPPLTPPSSVVTSPAPVHAKLVND", "length": 178, "header": "tr|Q9LRJ8-1|Q9LRJ8_ARATH Isoform 1 of Proline-rich family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LRJ8-1" }, "locus": { "chromosome": "3", "start_pos": 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"MEAAVPRLVNCGPEPIRFSVSSRRSFVSGIPHRNKRSRQILAVATDPKPTQTSPPKSTTVNGSSSPSSASKVVNNNVSTRINDVSKEIKRVRAQMEEDEQLSVLMRGLRGQNLKDSVFADDNIQLRLVETGESSEFLPLVYDPETISAYWGKRPRAVASRVIQLLSVAGGFLSRIAGDVINKKVKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSYPDDVAMALIEEELGKPWYDVYSELSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFVIRNLGLFLRKFPQVSVDVVGLVDEWAARFFEELDYVNEGENGTYFAEMMKKDLPQVVVPKTYQKYTSRKVLTTSWIDGEKLSQSIESDVGELVNVGVICYLKQLLDTGFFHADPHPGNMIRTPDGKLAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYDAIVKDFVKLGFIPDGVNLAPILPVLAKVFDQALEGGGAKNINFQELAADLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPEFAIVDEAYPYIAQRLLTDESPRLREALRYTIYGKTGVFDAERFIDVMQAFETFITAAKSGGGEDMNGGMAEMALMQSKTSSLVPMFPASASQPDQPVQTRVALSFLLSEKGNFFREFLLDEIVKGIDAITREQLVQAMAVFGFRNATPIFGMLPPTLGPFKPAALLPSVTEEDKVILNNVQKVIEFLTARSSMSNNPDQVVDVSQVVRELLPVLPGISATVLPEILSRLGSRVMARIVRDAFL", "length": 793, "header": "tr|Q9LRN0-1|Q9LRN0_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LRN0-1" }, "isoforms": [ { "isoform_ac": "Q9LRN0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRN0/entry#Q9LRN0-1", "sequence": { "sequence": "MEAAVPRLVNCGPEPIRFSVSSRRSFVSGIPHRNKRSRQILAVATDPKPTQTSPPKSTTVNGSSSPSSASKVVNNNVSTRINDVSKEIKRVRAQMEEDEQLSVLMRGLRGQNLKDSVFADDNIQLRLVETGESSEFLPLVYDPETISAYWGKRPRAVASRVIQLLSVAGGFLSRIAGDVINKKVKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSYPDDVAMALIEEELGKPWYDVYSELSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFVIRNLGLFLRKFPQVSVDVVGLVDEWAARFFEELDYVNEGENGTYFAEMMKKDLPQVVVPKTYQKYTSRKVLTTSWIDGEKLSQSIESDVGELVNVGVICYLKQLLDTGFFHADPHPGNMIRTPDGKLAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYDAIVKDFVKLGFIPDGVNLAPILPVLAKVFDQALEGGGAKNINFQELAADLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPEFAIVDEAYPYIAQRLLTDESPRLREALRYTIYGKTGVFDAERFIDVMQAFETFITAAKSGGGEDMNGGMAEMALMQSKTSSLVPMFPASASQPDQPVQTRVALSFLLSEKGNFFREFLLDEIVKGIDAITREQLVQAMAVFGFRNATPIFGMLPPTLGPFKPAALLPSVTEEDKVILNNVQKVIEFLTARSSMSNNPDQVVDVSQVVRELLPVLPGISATVLPEILSRLGSRVMARIVRDAFL", "length": 793, "header": "tr|Q9LRN0-1|Q9LRN0_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LRN0-1" }, "locus": { "chromosome": "3", "start_pos": 8743113, "end_pos": 8747901, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G24190.1", "url": "https://www.ensemblgenomes.org/id/AT3G24190.1" }, { "database": "Ensembl Peptide", "id": "AT3G24190.1", "url": "https://www.ensemblgenomes.org/id/AT3G24190.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 768, "end_pos": 768, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRN0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRN0" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser768" }, { "start_pos": 770, "end_pos": 770, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRN0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRN0" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Thr770" }, { "start_pos": 777, "end_pos": 777, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRN0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRN0" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser777" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LRN0", "url": "https://www.uniprot.org/uniprotkb/Q9LRN0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LRN0", "url": "https://www.uniprot.org/uniprotkb/Q9LRN0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9LRN0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRN0" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ], "pathway": [ { "id": "ath:AT3G24190", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24190", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase 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Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LRN9", "url": "https://www.uniprot.org/uniprotkb/Q9LRN9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LRN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRN9" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": 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{ "isoform_ac": "Q9LRP8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRP8/entry#Q9LRP8-1", "sequence": { "sequence": "MKKTLSPEPVTIYGNRQETFVGDMEYYTYFDESCIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSGNVSAIISSTSLESKNNHNDTQPESVTASVMKKRFFVETLIGILPPEKDSVPCNFLLRLLRTAKMVGANPNYLTELETRVSWQLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKFSGLDSEGVKTAAALVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSHARTTEDGLYRAIDTYLKAHPQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLFTEQTKLSRHIDCNSSSISSTTRSPTNASGSHYLEGGSAARCLSKREMNVQQAEIRRLREDVVRLQSQCGAMHFQLERLMEKKSSGGSKGFFRWKRLGLVPSIRGSVSVEKGEEESGDNGEGFEPRTPGNMKTRLVKGRTTPSRWRKSMS", "length": 452, "header": "tr|Q9LRP8-1|Q9LRP8_ARATH Isoform 1 of Phototropic-responsive NPH3 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LRP8-1" }, "locus": { "chromosome": "3", "start_pos": 5269849, "end_pos": 5271984, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G15570.1", "url": "https://www.ensemblgenomes.org/id/AT3G15570.1" }, { "database": "Ensembl Peptide", "id": "AT3G15570.1", "url": "https://www.ensemblgenomes.org/id/AT3G15570.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 326, "end_pos": 326, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser326" }, { "start_pos": 331, "end_pos": 331, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser331" }, { "start_pos": 404, "end_pos": 404, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser404" }, { "start_pos": 418, "end_pos": 418, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser418" }, { "start_pos": 6, "end_pos": 6, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser6" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LRP8", "url": "https://www.uniprot.org/uniprotkb/Q9LRP8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LRP8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRP8" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", 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"crossref": [ { "id": "AT3G29760", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G29760", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822663", "url": "https://www.ncbi.nlm.nih.gov/gene/822663", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004274", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004274", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G29760", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G29760", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189287", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189287", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G26550", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26550", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LRV1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LRV1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSVGVFDKVEMDEKSYLVYTLTQTKHPTSSAVESSGDDLPLQPLFSCPYARIRSHKFKVEKNYDGVNFFNFHPFNSYPHFPRTRTSYQQGESLLDYDHHNICKFPVVPLFWCNNKTPDSNEFECGGCEESKTSRSYYACLECGNKFHKQCVESPLEIKHPSHPFHSLRLYSHPTHMVCICCGRLVSNMFYHCVTCDLSMDPICAMEPIPFVVDHPKSHPHPITFFPTQATLACNICGLVKMLDPTYICIQCVFVIHKDCMGYPHVIRISRHQHRISFASSLPYGNLSCGVCHQRVDNNYGAYSCGKCDAYFVHSKCAFHRNVWDGKELEGVSEEDDIIDDGEPFERISDGVILHPYHSHHLRLEISKVYDENKYCRGCSFPIYEGQFYSCMECDFILHESCANAPRMKRHPLHPHPLTLNVATKELGNNEGVYHCNVCGRDGTGFFYEHHIGERRFRLDLRCASIREPFEYQCHKHPLCIASELEKKVRCQICKGKSYSKLNCMECDYIICFRCATFPYKVRYKHDSHFLRIRDGKKASDEPDWCEVCEGKIEEVKERESPWDKRREMRFYKCNDCCTTLHVECLLGRDMYMKPGNSVKDYISKHSLGIEGTQWTDVRVFLNSSLSRPICTGCMRRCLFPIVFKGYNTIFCSWECIGYGDTVFEHPTSNPFSSIVELELM", "length": 681, "header": "tr|Q9LRV1-1|Q9LRV1_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LRV1-1" }, "isoforms": [ { "isoform_ac": "Q9LRV1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1/entry#Q9LRV1-1", "sequence": { "sequence": "MSSVGVFDKVEMDEKSYLVYTLTQTKHPTSSAVESSGDDLPLQPLFSCPYARIRSHKFKVEKNYDGVNFFNFHPFNSYPHFPRTRTSYQQGESLLDYDHHNICKFPVVPLFWCNNKTPDSNEFECGGCEESKTSRSYYACLECGNKFHKQCVESPLEIKHPSHPFHSLRLYSHPTHMVCICCGRLVSNMFYHCVTCDLSMDPICAMEPIPFVVDHPKSHPHPITFFPTQATLACNICGLVKMLDPTYICIQCVFVIHKDCMGYPHVIRISRHQHRISFASSLPYGNLSCGVCHQRVDNNYGAYSCGKCDAYFVHSKCAFHRNVWDGKELEGVSEEDDIIDDGEPFERISDGVILHPYHSHHLRLEISKVYDENKYCRGCSFPIYEGQFYSCMECDFILHESCANAPRMKRHPLHPHPLTLNVATKELGNNEGVYHCNVCGRDGTGFFYEHHIGERRFRLDLRCASIREPFEYQCHKHPLCIASELEKKVRCQICKGKSYSKLNCMECDYIICFRCATFPYKVRYKHDSHFLRIRDGKKASDEPDWCEVCEGKIEEVKERESPWDKRREMRFYKCNDCCTTLHVECLLGRDMYMKPGNSVKDYISKHSLGIEGTQWTDVRVFLNSSLSRPICTGCMRRCLFPIVFKGYNTIFCSWECIGYGDTVFEHPTSNPFSSIVELELM", "length": 681, "header": "tr|Q9LRV1-1|Q9LRV1_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LRV1-1" }, "locus": { "chromosome": "3", "start_pos": 9746830, "end_pos": 9749102, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26550.1", "url": "https://www.ensemblgenomes.org/id/AT3G26550.1" }, { "database": "Ensembl Peptide", "id": "AT3G26550.1", "url": "https://www.ensemblgenomes.org/id/AT3G26550.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LRV1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LRV1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G26550", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26550", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LRV1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LRV1", "url": "https://www.uniprot.org/uniprotkb/Q9LRV1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 623, "end_pos": 625, "annotation": "n_glycosylation_sequon" } 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"class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LRW4-1", "uniprot_ac": "Q9LRW4", "uniprot_id": "FB144_ARATH", "mass": { "chemical_mass": 42451.0, "monoisotopic_mass": 42451.0 }, "refseq": { "ac": "NP_187999", "name": "F-box and associated interaction domains-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187999" }, "gene_names": [ { "name": "MCP4.5", "type": "synonym", "evidence": [ { "id": "Q9LRW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g13830", "type": "recommended", "evidence": [ { "id": "Q9LRW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_187999", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187999" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LRW4", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4", "locus": {} } ], "crossref": [ { "id": "Q9LRW4", "url": "https://alphafold.ebi.ac.uk/entry/Q9LRW4", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G13830", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G13830", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820595", "url": "https://www.ncbi.nlm.nih.gov/gene/820595", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050233", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050233", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G13830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VIEFEIY", "url": "https://omabrowser.org/oma/group/VIEFEIY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993:SF289", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993:SF289", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LRW4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LRW4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_187999", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187999", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G13830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G13830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LRW4", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LRW4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTTTTTTMSTLPMVLVDEILSRVPITSLRSLRSTCKRWEAQSKTNLVGGKATARKSSYLGFILIGNKICSMKLDLNGGDDFVDTSVNQISAFDDFEISQLFHCDGLLLCVSNKHYYSNTVMVCNMYLGETRLIEHCCLLEGFDNFGSYAFGYDSSKNRNHKIFRKKLVSGGYEIYSFKSDSWKDLNVDLGESTELCELGSVSLKGNAYFSVITKHEEEELWENNLLCFDFTTESFGKFLSLPFDNVTAEEEFGIMVLSCVRDEHLAVLYQLDTLGIWISTEIEPNKVSWREFLQVDLYTLDGFPDAFTAGRFIVDEEKQVVVVFNEATEIDLNHGNAFIFGRDGYFTSFNVGDTPPQDFTSYVPSLASLQIEKTGG", "length": 377, "header": "sp|Q9LRW4-1|FB144_ARATH Isoform 1 of Putative F-box protein At3g13830 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LRW4-1" }, "isoforms": [ { "isoform_ac": "Q9LRW4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRW4/entry#Q9LRW4-1", "sequence": { "sequence": "MTTTTTTTMSTLPMVLVDEILSRVPITSLRSLRSTCKRWEAQSKTNLVGGKATARKSSYLGFILIGNKICSMKLDLNGGDDFVDTSVNQISAFDDFEISQLFHCDGLLLCVSNKHYYSNTVMVCNMYLGETRLIEHCCLLEGFDNFGSYAFGYDSSKNRNHKIFRKKLVSGGYEIYSFKSDSWKDLNVDLGESTELCELGSVSLKGNAYFSVITKHEEEELWENNLLCFDFTTESFGKFLSLPFDNVTAEEEFGIMVLSCVRDEHLAVLYQLDTLGIWISTEIEPNKVSWREFLQVDLYTLDGFPDAFTAGRFIVDEEKQVVVVFNEATEIDLNHGNAFIFGRDGYFTSFNVGDTPPQDFTSYVPSLASLQIEKTGG", "length": 377, "header": "sp|Q9LRW4-1|FB144_ARATH Isoform 1 of Putative F-box protein At3g13830 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LRW4-1" }, "locus": { "chromosome": "3", "start_pos": 4553943, "end_pos": 4555076, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G13830.1", "url": "https://www.ensemblgenomes.org/id/AT3G13830.1" }, { "database": "Ensembl Peptide", "id": "AT3G13830.1", "url": 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OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LRW6-1" }, "isoforms": [ { "isoform_ac": "Q9LRW6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRW6/entry#Q9LRW6-1", "sequence": { "sequence": "MTTMSNLPAEVLEEILSRTPVTSLRTMRSTCKKWNNLSKKKIIPEAARKQQGLMLIKKKICSLSFSLHEIHKDDYVVPCINQVDIPRNIEVEKIFHCDGILLCVIEDNCSLLVWNPYLGQTRRIEVSSDADMNDRYALGYDNNNSSHKILRIKKDFKNSDGLGYEIYRFASNSWSLLDEEVMKPEWDVWSVQRSSVSLKGNTYFLLQGNDYDDQEDEEEEDDEEYEDDDDVLPKDNFLLCFDYTTERFGPRLLLPFNPHVEETVALSCIGEERLVMLYQSFKTYKGIEIWVTDKIDPKAVSWSKFLKVDITPLTGFPVDFYADSFVIDEEKKVAAVFDIHCSYQKAHIIGEDGYLKCVNMGRASDVGNGQPLVFSSYVPSLVKVPVKQPKGKRKGRSSETKSNKNKKGRKIKIIG", "length": 415, "header": "sp|Q9LRW6-1|FB142_ARATH Isoform 1 of F-box protein At3g13820 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LRW6-1" }, "locus": { "chromosome": "3", "start_pos": 4549616, "end_pos": 4551011, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G13820.1", "url": "https://www.ensemblgenomes.org/id/AT3G13820.1" }, { "database": "Ensembl Peptide", "id": "AT3G13820.1", "url": "https://www.ensemblgenomes.org/id/AT3G13820.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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"https://www.ebi.ac.uk/interpro/entry/IPR005508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G24850", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24850", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SCITENA", "url": "https://omabrowser.org/oma/group/SCITENA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31541", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31541", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31541:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31541:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03754", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03754", "database": 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"MSSMYHDYDHLTASGKGLWSKFYGLVDAAVLLYDEIQRRGKIVSEEESQKRIFCLFPRRKRSSLVKRQQKLNGGFISFTSSSLIDLNQLPTDSEIEDPQTSDSQMKTLQNSSSEPCTSLVLFDYKTAESEKMEAKTLQNPSSELCSSLVLSDYKMAESEKMETKDPPNPLSLCLTGNTSRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGVLCFAMEQSSSSLALCLC", "length": 359, "header": "sp|Q9LRX6-1|Y3485_ARATH Isoform 1 of Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LRX6-1" }, "isoforms": [ { "isoform_ac": "Q9LRX6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LRX6/entry#Q9LRX6-1", "sequence": { "sequence": "MSSMYHDYDHLTASGKGLWSKFYGLVDAAVLLYDEIQRRGKIVSEEESQKRIFCLFPRRKRSSLVKRQQKLNGGFISFTSSSLIDLNQLPTDSEIEDPQTSDSQMKTLQNSSSEPCTSLVLFDYKTAESEKMEAKTLQNPSSELCSSLVLSDYKMAESEKMETKDPPNPLSLCLTGNTSRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGVLCFAMEQSSSSLALCLC", "length": 359, "header": "sp|Q9LRX6-1|Y3485_ARATH Isoform 1 of Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LRX6-1" }, "locus": { "chromosome": "3", "start_pos": 9071105, "end_pos": 9072184, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G24850.1", "url": "https://www.ensemblgenomes.org/id/AT3G24850.1" }, { "database": "Ensembl Peptide", "id": "AT3G24850.1", "url": "https://www.ensemblgenomes.org/id/AT3G24850.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 158, "end_pos": 158, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRX6" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ], "site_lbl": "Ser158" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LRX6", "url": "https://www.uniprot.org/uniprotkb/Q9LRX6" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "The plant B3 superfamily.", "journal": "Trends Plant Sci.", "date": "2008", "authors": "Swaminathan Kankshita, Peterson Kevin, Jack Thomas", "evidence": [ { "database": "UniProtKB", "id": "Q9LRX6", "url": "https://www.uniprot.org/uniprotkb/Q9LRX6" } ], "reference": [ { "type": "PubMed", "id": "18986826", "url": "https://glygen.org/publication/PubMed/18986826" } ] }, { "title": "Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean.", "journal": "Plant physiology", "date": "2012-05", "authors": "Meyer Louis J, Gao Jianjiong, Xu 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"MSSKTRNMLEGLVRDTSFKWLLGKQSSFDEEIEEMGRSPSAGTNWIPELSPIANVVVRRCSKILGVSANELRDSFKQEAFESLKQPSLFPRNFLEYCCFRALSLSVGVTGHLADKKFRRLTFDMMVVWEVPAVASQALLSVEEDATVSLEAFSRIAPAVPIIADVIICDNLFQMLTSSTGGRLQFSVYDKYLHGLERAIKKMRTQSESSLLSGVRSKREKILEIDGTVTTQPVLEHVGISTWPGRLILTDHSLYFEALKVVSYDTPKRYHLSEDLKQIIKPELTGPWGTRLFDKAVSYQSISLSEPVVMEFPELKGHTRRDYWLTIIQEVLYVHRYINKYKITGLARDEALSKAVLGVMRVQALQELNLTNAMRYENLLPFNLCDQLPGGDLILETLAEMSTSRELHRSNKSKDTGTLHSSASDMVSQLGSVFGGSSPRSRRETSSLVVGEVVVGDVNPLERAVKESRKKYEKVVLAQETINGVKMGGIDTNLAVMKELMLPIMETWNLILSVVYWDDPTKSSVFCLLTTFIIWRGWLVYVFALASLFSAIFMVLTRCFSREKLMIELKVTAPPPMNTMEQLLAVQNGISELEQNIQDANIVLLKFRALLFSLFPQASQKFAIAIVVAATMMAFVPGRYLLSVVFVELFTRYSPPRRASTERLIRRLREWWFSIPAAPVVLLHDKNNKKKKN", "length": 692, "header": "tr|Q9LS55-1|Q9LS55_ARATH Isoform 1 of Heat-inducible transcription repressor (DUF639) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LS55-1" }, "isoforms": [ { "isoform_ac": "Q9LS55-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS55/entry#Q9LS55-1", "sequence": { "sequence": "MSSKTRNMLEGLVRDTSFKWLLGKQSSFDEEIEEMGRSPSAGTNWIPELSPIANVVVRRCSKILGVSANELRDSFKQEAFESLKQPSLFPRNFLEYCCFRALSLSVGVTGHLADKKFRRLTFDMMVVWEVPAVASQALLSVEEDATVSLEAFSRIAPAVPIIADVIICDNLFQMLTSSTGGRLQFSVYDKYLHGLERAIKKMRTQSESSLLSGVRSKREKILEIDGTVTTQPVLEHVGISTWPGRLILTDHSLYFEALKVVSYDTPKRYHLSEDLKQIIKPELTGPWGTRLFDKAVSYQSISLSEPVVMEFPELKGHTRRDYWLTIIQEVLYVHRYINKYKITGLARDEALSKAVLGVMRVQALQELNLTNAMRYENLLPFNLCDQLPGGDLILETLAEMSTSRELHRSNKSKDTGTLHSSASDMVSQLGSVFGGSSPRSRRETSSLVVGEVVVGDVNPLERAVKESRKKYEKVVLAQETINGVKMGGIDTNLAVMKELMLPIMETWNLILSVVYWDDPTKSSVFCLLTTFIIWRGWLVYVFALASLFSAIFMVLTRCFSREKLMIELKVTAPPPMNTMEQLLAVQNGISELEQNIQDANIVLLKFRALLFSLFPQASQKFAIAIVVAATMMAFVPGRYLLSVVFVELFTRYSPPRRASTERLIRRLREWWFSIPAAPVVLLHDKNNKKKKN", "length": 692, "header": "tr|Q9LS55-1|Q9LS55_ARATH Isoform 1 of Heat-inducible transcription repressor (DUF639) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LS55-1" }, "locus": { "chromosome": "3", "start_pos": 6296677, "end_pos": 6300673, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18350.2", "url": "https://www.ensemblgenomes.org/id/AT3G18350.2" }, { "database": "Ensembl Peptide", "id": "AT3G18350.2", "url": "https://www.ensemblgenomes.org/id/AT3G18350.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 26, "end_pos": 26, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LS55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS55" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser26" }, { "start_pos": 27, "end_pos": 27, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LS55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS55" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser27" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LS55", "url": "https://www.uniprot.org/uniprotkb/Q9LS55" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LS55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS55" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LS55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS55" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LS55", "url": "https://www.uniprot.org/uniprotkb/Q9LS55" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LS55", "url": "https://www.uniprot.org/uniprotkb/Q9LS55" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 368, "end_pos": 370, "annotation": "n_glycosylation_sequon" }, { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 26, 27 ], "sequon_annotation_sites": [ { "start_pos": 368, "end_pos": 370 }, { "start_pos": 410, "end_pos": 412 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LS56-1", "uniprot_ac": "Q9LS56", "uniprot_id": "FB160_ARATH", "mass": { "chemical_mass": 41626.0, "monoisotopic_mass": 41626.0 }, "refseq": { "ac": "NP_188463", "name": "F-box and associated interaction domains-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188463" }, "gene_names": [ { "name": "MYF24.6", "type": "synonym", "evidence": [ { "id": "Q9LS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS56" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g18340", "type": "recommended", "evidence": [ { "id": "Q9LS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS56/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_188463", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188463" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LS56", "url": "https://www.uniprot.org/uniprotkb/Q9LS56" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LS56", "locus": {} } ], "crossref": [ { "id": "Q9LS56", "url": "https://alphafold.ebi.ac.uk/entry/Q9LS56", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G18340", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G18340", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821363", "url": "https://www.ncbi.nlm.nih.gov/gene/821363", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050233", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050233", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RITACNG", "url": "https://omabrowser.org/oma/group/RITACNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993:SF385", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993:SF385", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LS56", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LS56", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_188463", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188463", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LS56", "url": "https://www.uniprot.org/uniprotkb/Q9LS56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LS56-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS56-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASGKLPWELEEEILCRLPPGSLVRLRSVCKHWNDLYNDKWFIKKSLGFARPQFIILAGFKIYSIGTIGLDVVDPKIEAEKWAFTRITACNGLLFRDFWNQGVTIWNPWLRQVGWIEYKEDKDFRFCGIGYDAGKPEKGYKIFGYFNRFYDTKLKIGHRFAIFECASQAFKFIDSPEWPTLAGRGEYVSLNGNLYWTAYNEDTREHFLGSFDFSTEISMHFCLLPCAKHVSGLQDKLVLTVFKGDRFALLKQSRISSNTEIWVTKDKINSSNNVVWLNLMTLSIPDFPSLFHQLSDISYFIHDMTLILCCDDNQTGVGCIFIARGDLCKKIQINYVSLGFSQCVYLPSLTSVPLEFRSLQV", "length": 361, "header": "sp|Q9LS56-1|FB160_ARATH Isoform 1 of Putative F-box protein At3g18340 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9LS56-1" }, "isoforms": [ { "isoform_ac": "Q9LS56-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS56/entry#Q9LS56-1", "sequence": { "sequence": "MASGKLPWELEEEILCRLPPGSLVRLRSVCKHWNDLYNDKWFIKKSLGFARPQFIILAGFKIYSIGTIGLDVVDPKIEAEKWAFTRITACNGLLFRDFWNQGVTIWNPWLRQVGWIEYKEDKDFRFCGIGYDAGKPEKGYKIFGYFNRFYDTKLKIGHRFAIFECASQAFKFIDSPEWPTLAGRGEYVSLNGNLYWTAYNEDTREHFLGSFDFSTEISMHFCLLPCAKHVSGLQDKLVLTVFKGDRFALLKQSRISSNTEIWVTKDKINSSNNVVWLNLMTLSIPDFPSLFHQLSDISYFIHDMTLILCCDDNQTGVGCIFIARGDLCKKIQINYVSLGFSQCVYLPSLTSVPLEFRSLQV", "length": 361, "header": "sp|Q9LS56-1|FB160_ARATH Isoform 1 of Putative F-box protein At3g18340 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9LS56-1" }, "locus": { "chromosome": "3", "start_pos": 6294018, "end_pos": 6295134, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18340.1", "url": "https://www.ensemblgenomes.org/id/AT3G18340.1" }, { "database": "Ensembl Peptide", "id": "AT3G18340.1", "url": "https://www.ensemblgenomes.org/id/AT3G18340.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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"https://www.uniprot.org/uniprotkb/Q9LS58/entry#Q9LS58-1", "sequence": { "sequence": "MTLPELPKDLVEEILCFVPATSLKRLRSTCKGWNRLFKDDKRFARKHIEKAAKQFQPLTLTKNYRICPINVNLHGTTPSLEVKNEWIELGDRYNEDKDSEIYEFSSDSWRVIDDIIKPPHYMEYFRKCLSLKGNTYWLGIDRRRRPPDLRITLIKFDFGTEKFGYVPLPPPCQVHGFEASRLSAVGDEKLSLLLVGDSTSNTELWVTSKIGEANVVSWSKVLSLYPKPNVGFWHGLSFLLDEEKKVLLCCKSKGWMKEEDEDNVYIVGEDTKFILLNFGVQTIGGYSPIIVNYVPSLGQIELAGSKRKRDY", "length": 311, "header": "sp|Q9LS58-1|FB158_ARATH Isoform 1 of F-box protein At3g18320 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LS58-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LS58", "url": "https://www.uniprot.org/uniprotkb/Q9LS58" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LS58", "url": "https://www.uniprot.org/uniprotkb/Q9LS58" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LS59-1", "uniprot_ac": "Q9LS59", "uniprot_id": "Q9LS59_ARATH", "mass": { "chemical_mass": 98383.0, "monoisotopic_mass": 98383.0 }, "refseq": { "ac": "NP_188460", "name": "TATA box-binding protein associated factor RNA polymerase I subunit C", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188460" }, "gene_names": [], "protein_names": [ { "name": 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subunit C OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LS59-1" }, "locus": { "chromosome": "3", "start_pos": 6284356, "end_pos": 6287225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18310.1", "url": "https://www.ensemblgenomes.org/id/AT3G18310.1" }, { "database": "Ensembl Peptide", "id": "AT3G18310.1", "url": "https://www.ensemblgenomes.org/id/AT3G18310.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 112, "end_pos": 112, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LS59", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS59" } ], "site_lbl": "Ser112" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LS59", "url": "https://www.uniprot.org/uniprotkb/Q9LS59" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { 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"MICTESNHQRFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETRGSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKSLICSFPRLTRSNSTGSVAISKREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSFCCSSYQFRPQKHAGKNGGGRGGSFWIAPVIGGPSPFGLGSILRLTKEKKKK", "length": 274, "header": "tr|Q9LS60-1|Q9LS60_ARATH Isoform 1 of Membrane-associated kinase regulator OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LS60-1" }, "locus": { "chromosome": "3", "start_pos": 6281923, "end_pos": 6284372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18300.1", "url": "https://www.ensemblgenomes.org/id/AT3G18300.1" }, { "database": "Ensembl Peptide", "id": "AT3G18300.1", "url": "https://www.ensemblgenomes.org/id/AT3G18300.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": 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H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LS60", "url": "https://www.uniprot.org/uniprotkb/Q9LS60" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan 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"categories": [ "Protein" ] }, { "id": "AT3G29240", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G29240", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LS71", "url": "https://www.uniprot.org/uniprotkb/Q9LS71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LS71-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS71-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDACFLTSRSISGVKELVPFIKARIFTCPKRNSGQFVTRKVASPISVNCSLSDSWKPLEDDADLFKDCVNNSTSDADWREFRARLVAGEQAATSEKDQPSWSNPDMVVDYQPSSSSLITIGSKWAHKIHEPETGCLLIATEKLDGVHIFEKTVILLLSVGPSGPIGVILNRPSLMSIKETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRESVGLAAEMVKRNLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSSTVVELGSAVQSHGLWDEVLGLIGPQTGSVI", "length": 317, "header": "tr|Q9LS71-1|Q9LS71_ARATH Isoform 1 of PPR containing protein (DUF179) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LS71-1" }, "isoforms": [ { 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A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LS71", "url": "https://www.uniprot.org/uniprotkb/Q9LS71" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-10", "authors": "Wu Xu Na, Sanchez Rodriguez Clara, Pertl-Obermeyer Heidi, Obermeyer Gerhard, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LS71", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LS71" } ], "reference": [ { "type": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LS71", "url": "https://www.uniprot.org/uniprotkb/Q9LS71" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G29240", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G29240", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LS71", "url": "https://www.uniprot.org/uniprotkb/Q9LS71" } ], "pmid": "" }, { "name": "plastid stroma", "id": "GO:0009532", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009532", "evidence": [ { "database": 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[], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LS84", "url": "https://www.uniprot.org/uniprotkb/Q9LS84" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LS84", "locus": {} } ], "crossref": [ { "id": "AT3G23080", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G23080", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd08870", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08870", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821882", "url": "https://www.ncbi.nlm.nih.gov/gene/821882", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002913", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002913", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023393", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023393", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G23080", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23080", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LAVGWSW", "url": "https://omabrowser.org/oma/group/LAVGWSW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR19308", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19308", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19308:SF36", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19308:SF36", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01852", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01852", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566722", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566722", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23080", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23080", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J2V1", "url": "https://www.uniprot.org/uniprotkb/F4J2V1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J2V1-1", "url": "https://www.uniprot.org/uniprotkb/F4J2V1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LS84", "url": "https://www.uniprot.org/uniprotkb/Q9LS84", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LS84-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS84-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDIFMDFFNKPSVTETFVDVLLCAVPIWVTVMIGLLIGWSWRPRWTSLVYLGFRSKLRFLCTVPPGFGARRIWLAFTALSAFSVCSTSNKSSVNNGSSKPVEEEAFSRASDKVTEKEKDVVTEKDLEHLLHLLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIVRDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWESGRKYYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKPGTSLSRSAQMASITTKLNMDLVETSGAEDEERGRAVENARKQNDQFGVDWKWIVVGGVALACGLHSSAIGKALMVGAGQRLARR", "length": 419, "header": "tr|Q9LS84-1|Q9LS84_ARATH Isoform 1 of Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LS84-1" }, "isoforms": [ { "isoform_ac": "F4J2V1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LS84/entry#F4J2V1-1", "sequence": { "sequence": 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"https://www.ensemblgenomes.org/id/AT3G23080.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 249, "start_aa": "Thr", "end_pos": 249, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr249", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LSA5", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LSA5", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_566617", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566617", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18720", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18720", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSA5", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSA5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRTRRQTYPPIAESLTARSIVQALPASATISGNGGPKKKKNCVNRGLWDKQIPTDLLQEILSRLGLKANIHASLVCKTWLKEAVSVRKFQSRPWLFYPQSQRGGPKEGDYVLFNPSRSQTHHLKFPELTGYRNKLACAKDGWLLVVKDNPDVVFFLNPFTGERICLPQVPQNSTRDCLTFSAAPTSTSCCVISFTPQSFLYAVVKVDTWRPGESVWTTHHFDQKRYGEVINRCIFSNGMFYCLSTSGRLSVFDPSRETWNVLPVKPCRAFRRKIMLVRQVFMTEHEGDIFVVTTRRVNNRKLLAFKLNLQGNVWEEMKVPNGLTVFSSDATSLTRAGLPEEERNILYSSDIDDFVKSSHPTFYYYDCSAWLQPPHDNFNF", "length": 380, "header": "sp|Q9LSA5-1|FBK62_ARATH Isoform 1 of F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LSA5-1" }, "isoforms": [ { "isoform_ac": "Q9LSA5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5/entry#Q9LSA5-1", "sequence": { "sequence": "MRTRRQTYPPIAESLTARSIVQALPASATISGNGGPKKKKNCVNRGLWDKQIPTDLLQEILSRLGLKANIHASLVCKTWLKEAVSVRKFQSRPWLFYPQSQRGGPKEGDYVLFNPSRSQTHHLKFPELTGYRNKLACAKDGWLLVVKDNPDVVFFLNPFTGERICLPQVPQNSTRDCLTFSAAPTSTSCCVISFTPQSFLYAVVKVDTWRPGESVWTTHHFDQKRYGEVINRCIFSNGMFYCLSTSGRLSVFDPSRETWNVLPVKPCRAFRRKIMLVRQVFMTEHEGDIFVVTTRRVNNRKLLAFKLNLQGNVWEEMKVPNGLTVFSSDATSLTRAGLPEEERNILYSSDIDDFVKSSHPTFYYYDCSAWLQPPHDNFNF", "length": 380, "header": "sp|Q9LSA5-1|FBK62_ARATH Isoform 1 of F-box/kelch-repeat protein At3g18720 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LSA5-1" }, "locus": { "chromosome": "3", "start_pos": 6444367, "end_pos": 6445808, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18720.1", "url": "https://www.ensemblgenomes.org/id/AT3G18720.1" }, { "database": "Ensembl Peptide", "id": "AT3G18720.1", "url": "https://www.ensemblgenomes.org/id/AT3G18720.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LSA5", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.", "journal": "Plant Biotechnol. J.", "date": "2006", "authors": "Underwood Beverly A, Vanderhaeghen Rudy, Whitford Ryan, Town Christopher D, Hilson Pierre", "evidence": [ { "database": "UniProtKB", "id": "Q9LSA5", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5" } ], "reference": [ { "type": "PubMed", "id": "17147637", "url": "https://glygen.org/publication/PubMed/17147637" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSA5", "url": "https://www.uniprot.org/uniprotkb/Q9LSA5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18720", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LSA5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 380, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LSA5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LSA5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 172, "end_pos": 174 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSB0-1", "uniprot_ac": "Q9LSB0", "uniprot_id": "Q9LSB0_ARATH", "mass": { "chemical_mass": 74813.0, "monoisotopic_mass": 74813.0 }, "refseq": { "ac": "NP_001325956", "name": "Ankyrin repeat family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325956" }, "gene_names": [], "protein_names": [ { "name": "Ankyrin repeat family protein", "type": "synonym", "evidence": [ { "id": "NP_001325956", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325956" }, { "id": "Q9LSB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSB0", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0", "locus": {} } ], "crossref": [ { "id": "AT3G18670", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G18670", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821398", "url": "https://www.ncbi.nlm.nih.gov/gene/821398", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VYSCIHI", "url": "https://omabrowser.org/oma/group/VYSCIHI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24177", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24177", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24177:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24177:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001325956", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325956", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18670", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18670", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J8U1", "url": "https://www.uniprot.org/uniprotkb/F4J8U1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J8U1-1", "url": "https://www.uniprot.org/uniprotkb/F4J8U1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSB0", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSB0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDTEKGYPRGFRAESLRPETGPRSFRFDSMQIDEAADLQKDEIRQENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKNDNGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVASLYGHKHLVQYLYSHTPLSDLDPCDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPKLAYTRDSDNDTAIMALAQTPYAFPSGTRLAFWQRWIYSCIHIEKINNPHEVNNHHHHHQYRNSQDHNSIQEKLMKHLKYLFPRIIRRVYKLKLGHAQAKEILDCICQEIPKFDAAQQKNAGLNQALFKAVENGIVEYIEEMMRHYPDIVWSKNSSGLNIFFYAVSQRQEKIFSLIYNIGAKKNILATNWDIFHNNMLHHAAYRAPASRLNLIPGAALQMQRELQWFKEVEKLVQPKHRKMVNLKQKKTPKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMMFSSAFTVPGGYRSDGMPLYIHQHRFKIFLISDAISLFTSCMSLLMFLGILKSRYREEDFLRSLPTKLIVGLLALFLSMATMIVTFVVTLMTLVGEKISWVSAQFMFLAVIPLGMFVVLQFPVLLEIFRATYCPNVFDKPRRVFKL", "length": 653, "header": "tr|Q9LSB0-1|Q9LSB0_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSB0-1" }, "isoforms": [ { "isoform_ac": "F4J8U1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0/entry#F4J8U1-1", "sequence": { "sequence": "MDTEKGYPRGFRAESLRPETGPRSFRFDSMQIDEAADLQKDEIRQENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKNDNGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVASLYGHKHLVQYLYSHTPLSDLDPCDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPKLAYTRDSDNDTAIMALAQTPYAFPSVPRIIRRVYKLKLGHAQAKEILDCICQEIPKFDAAQQKNAGLNQALFKAVENGIVEYIEEMMRHYPDIVWSKNSSGLNIFFYAVSQRQEKIFSLIYNIGAKKNILATNWDIFHNNMLHHAAYRAPASRLNLIPGAALQMQRELQWFKEVEKLVQPKHRKMVNLKQKKTPKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMMFSSAFTVPGGYRSDGMPLYIHQHRFKIFLISDAISLFTSCMSLLMFLGILKSRYREEDFLRSLPTKLIVGLLALFLSMATMIVTFVVTLMTLVGEKISWVSAQFMFLAVIPLGMFVVLQFPVLLEIFRATYCPNVFDKPRRVFKL", "length": 598, "header": "tr|F4J8U1-1|F4J8U1_ARATH Computationally mapped isoform of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSB0-1" }, "locus": { "chromosome": "3", "start_pos": 6424126, "end_pos": 6426471, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18670.1", "url": "https://www.ensemblgenomes.org/id/AT3G18670.1" }, { "database": "Ensembl Peptide", "id": "AT3G18670.1", "url": "https://www.ensemblgenomes.org/id/AT3G18670.1" } ] } }, { "isoform_ac": "Q9LSB0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0/entry#Q9LSB0-1", "sequence": { "sequence": "MDTEKGYPRGFRAESLRPETGPRSFRFDSMQIDEAADLQKDEIRQENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKNDNGYTALTYAATGGIVRIAECLVNKCPGLVSVRNAKEHIPIVVASLYGHKHLVQYLYSHTPLSDLDPCDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPKLAYTRDSDNDTAIMALAQTPYAFPSGTRLAFWQRWIYSCIHIEKINNPHEVNNHHHHHQYRNSQDHNSIQEKLMKHLKYLFPRIIRRVYKLKLGHAQAKEILDCICQEIPKFDAAQQKNAGLNQALFKAVENGIVEYIEEMMRHYPDIVWSKNSSGLNIFFYAVSQRQEKIFSLIYNIGAKKNILATNWDIFHNNMLHHAAYRAPASRLNLIPGAALQMQRELQWFKEVEKLVQPKHRKMVNLKQKKTPKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMMFSSAFTVPGGYRSDGMPLYIHQHRFKIFLISDAISLFTSCMSLLMFLGILKSRYREEDFLRSLPTKLIVGLLALFLSMATMIVTFVVTLMTLVGEKISWVSAQFMFLAVIPLGMFVVLQFPVLLEIFRATYCPNVFDKPRRVFKL", "length": 653, "header": "tr|Q9LSB0-1|Q9LSB0_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSB0-1" }, "locus": { "chromosome": "3", "start_pos": 6423900, "end_pos": 6426561, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18670.2", "url": "https://www.ensemblgenomes.org/id/AT3G18670.2" }, { "database": "Ensembl Peptide", "id": "AT3G18670.2", "url": "https://www.ensemblgenomes.org/id/AT3G18670.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSB0", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSB0", "url": "https://www.uniprot.org/uniprotkb/Q9LSB0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18670", "name": "", "url": 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"database": "iPTMnet", "id": "Q9LSB5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSB5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser16" }, { "start_pos": 23, "end_pos": 23, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSB5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSB5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr23" }, { "start_pos": 27, "end_pos": 27, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSB5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSB5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser27" } ], 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"MDSFWQLGDELRGQTRASEDHKWSTVATKLAEQTRMKGERMNNLDLSKGYTEFRPSEKFSFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSGGNMKVNKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATTFGGTNIDATAWEDKKCKGESRFPAQVRIRVRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSA", "length": 296, "header": "tr|Q9LSC7-1|Q9LSC7_ARATH Isoform 1 of DCD (Development and Cell Death) domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSC7-1" }, "isoforms": [ { "isoform_ac": "Q9LSC7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSC7/entry#Q9LSC7-1", "sequence": { "sequence": "MDSFWQLGDELRGQTRASEDHKWSTVATKLAEQTRMKGERMNNLDLSKGYTEFRPSEKFSFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSGGNMKVNKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATTFGGTNIDATAWEDKKCKGESRFPAQVRIRVRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSA", "length": 296, "header": "tr|Q9LSC7-1|Q9LSC7_ARATH Isoform 1 of DCD (Development and Cell Death) domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSC7-1" }, "locus": { "chromosome": "3", "start_pos": 9989685, "end_pos": 9991903, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27090.3", "url": "https://www.ensemblgenomes.org/id/AT3G27090.3" }, { "database": "Ensembl Peptide", "id": "AT3G27090.3", "url": "https://www.ensemblgenomes.org/id/AT3G27090.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 197, "start_aa": "Thr", "end_pos": 197, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr197", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], 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Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSC7", "url": "https://www.uniprot.org/uniprotkb/Q9LSC7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSC7", "url": "https://www.uniprot.org/uniprotkb/Q9LSC7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G27090", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27090", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "response to endoplasmic reticulum stress", "id": "GO:0034976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034976", "evidence": [ { "database": "UniProtKB", "id": "Q9LSC7", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSD2-1", "uniprot_ac": "Q9LSD2", "uniprot_id": "MCC11_ARATH", "mass": { "chemical_mass": 31021.0, "monoisotopic_mass": 31021.0 }, "refseq": { "ac": "NP_001319652", "name": "MATH domain/coiled-coil protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319652" }, "gene_names": [ { "name": "MOJ10.11", "type": "synonym", "evidence": [ { "id": "Q9LSD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ] } ], "protein_names": [ { "name": "MATH domain and coiled-coil domain-containing protein At3g27040", "type": "recommended", "evidence": [ { "id": "Q9LSD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2/entry#names_and_taxonomy" } ] }, { "name": "MATH domain/coiled-coil protein", "type": "synonym", "evidence": [ { "id": "NP_001319652", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319652" } ] }, { "name": "RTM3-like protein At3g27040", "type": "synonym", "evidence": [ { "id": "Q9LSD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2", "locus": {} } ], "crossref": [ { "id": "Q9LSD2", "url": "https://alphafold.ebi.ac.uk/entry/Q9LSD2", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G27040", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G27040", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00121", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00121", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "822322", "url": "https://www.ncbi.nlm.nih.gov/gene/822322", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008974", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008974", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050804", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050804", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G27040", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GNHQADK", "url": "https://omabrowser.org/oma/group/GNHQADK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236:SF21", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236:SF21", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF22486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LSD2", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LSD2", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001319652", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319652", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G27040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSD2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNHQADKKFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNSESLPSGWRRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGFLVNGEVKIVAEVDVLEVIGELDVPEEPERIDINGFQVPASQVESMNSLFEKYRGFASKIFPKNQHLRKTFLDVVLSMTEILCKFPEELSSGDLAEAYSALRFVTKAGFKLDWLEKKLKETGKSRLQEIEEDLKDLKVKCADMDALLDFLR", "length": 271, "header": "sp|Q9LSD2-1|MCC11_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g27040 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSD2-1" }, "isoforms": [ { "isoform_ac": "Q9LSD2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2/entry#Q9LSD2-1", "sequence": { "sequence": "MGNHQADKKFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNSESLPSGWRRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGFLVNGEVKIVAEVDVLEVIGELDVPEEPERIDINGFQVPASQVESMNSLFEKYRGFASKIFPKNQHLRKTFLDVVLSMTEILCKFPEELSSGDLAEAYSALRFVTKAGFKLDWLEKKLKETGKSRLQEIEEDLKDLKVKCADMDALLDFLR", "length": 271, "header": "sp|Q9LSD2-1|MCC11_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g27040 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSD2-1" }, "locus": { "chromosome": "3", "start_pos": 9974768, "end_pos": 9976390, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27040.1", "url": "https://www.ensemblgenomes.org/id/AT3G27040.1" }, { "database": "Ensembl Peptide", "id": "AT3G27040.1", "url": "https://www.ensemblgenomes.org/id/AT3G27040.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "RTM3, which controls long-distance movement of potyviruses, is a member of a new plant gene family encoding a meprin and TRAF homology domain-containing protein.", "journal": "Plant Physiol.", "date": "2010", "authors": "Cosson Patrick, Sofer Luc, Le Quang Hien, L\u00e9ger Val\u00e9rie, Schurdi-Levraud Val\u00e9rie, Whitham Steven A, Yamamoto Miki L, Gopalan Suresh, Le Gall Olivier, Candresse Thierry, Carrington James C, Revers Fr\u00e9d\u00e9ric", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ], "reference": [ { "type": "PubMed", "id": "20584941", "url": "https://glygen.org/publication/PubMed/20584941" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G27040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD2", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LSD2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 271, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LSD2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LSD2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LSD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSD2" }, { "id": "PRU00129", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00129" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MATH", "eco_id": "ECO_0000255", "start_pos": 7, "end_pos": 133, "start_aa": "Asp", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSE3-1", "uniprot_ac": "Q9LSE3", "uniprot_id": "Q9LSE3_ARATH", "mass": { "chemical_mass": 85232.0, "monoisotopic_mass": 85232.0 }, "refseq": { "ac": "NP_189307", "name": "RING/U-box superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189307" }, "gene_names": [], "protein_names": [ { "name": "RING/U-box superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_189307", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189307" }, { "id": "Q9LSE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3", "locus": {} } ], "crossref": [ { "id": "AT3G26730", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G26730", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd16536", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16536", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "822285", "url": "https://www.ncbi.nlm.nih.gov/gene/822285", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LSE3", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LSE3*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017907", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017907", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018957", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018957", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039739", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039739", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G26730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PRWKKCP", "url": "https://omabrowser.org/oma/group/PRWKKCP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12983", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12983", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12983:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12983:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00097", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00097", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189307", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G26730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNI8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNI8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNI8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNI8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNI9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNI9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNI9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNJ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSE3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSILPPPIIQGHNSSSPSSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGGSREPSVAAEEGHSRGSSKEMTQNGAGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSSSQLQHNSGPFNSPRGGVSHHNPTGRRANMISGNHLLNFQYDPISQPQSRGPPPPQRRQQYKGRPFNKDLFLKANYKFVVLDTGDHSPDSMDPDKMLQWDDIICVRYSTPSPVQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTVYIENVKQYSVGDPIEFVLLTRKKDSFAPTRKNEHDLAVPNGENEIYDPFSKFTFTQDVDLSVRQAVSELDSWIARADPQLVEDLEKHLYVNAALERLEQRKLYWNEHKLSIYSKVCTTARNQTQSLSPPDVSRVGYQAPMGGHGAPDSGSNDQDKSTEDSSADKSDGESQSSLEKGCDNDLGHPLEDQDAPSSSSCNGSKGFLSHQIDTKDLKDNDAYNFYQSVDGQHIILHTLNVKCLLHHYGSYDFLPPRLSGKILEMETITQSEAIRRRYRFLSHFSLSTTLQICEIDMKESLPPDAFAPFIHEIKKREKQRKERAWKDRKNKIKAEVAAAAELVPLMASFGQSSSSDDFPPFSLDDFEALGNSAPISSSPPNIGERSSFSHVTRLGFAAGHDSPNLNNEPTNVQSSSSSSEVSNATTGARNTNITSFASVASRTTTPMAPTVKEPGKRGKKQSRVLLSTTSVRRY", "length": 772, "header": "tr|Q9LSE3-1|Q9LSE3_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSE3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNI8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3/entry#A0A1I9LNI8-1", "sequence": { "sequence": "MSILPPPIIQGHNSSSPSSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGGSREPSVAAEEGHSRGSSKEMTQNGAGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSSSQLQHNSGPFNSPRGGVSHHNPTGRRANMISGNHLLNFQYDPISQPQSRGPPPPQRRQQYKGRPFNKDLFLKANYKFVVLDTGDHSPDSMDPDKMLQWDDIICVRYSTPSPVQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTVYIENVKQYSVGDPIEFVLLTRKKDSFAPTRKNEHDLAVPNGENEIYDPFSKFTFTQDVDLSVRQAVSELDSWIARADPQLVEDLEKHLYVNAALERLEQRKLYWNEHKLSIYSKVCTTARNQTQSLSPPDVSRVGYQAPMGGHGAPDSGSNDQDKSTEDSSADKSDGESQSSLEKGCDNDLGHPLEDQDAPSSSSCNGSKGFLSHQIDTKDLKDNDAYNFYQSVDGQHIILHTLNVKCLLHHYGSYDFLPPRLSGKILEMETITQSEAIRRRYRFLSHFSLSTTLQICEIDMKESLPPDAFAPFIHEIKKREKQRKERAWKVFSF", "length": 628, "header": "tr|A0A1I9LNI8-1|A0A1I9LNI8_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSE3-1" }, "locus": { "chromosome": "3", "start_pos": 9823637, "end_pos": 9827547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26730.6", "url": "https://www.ensemblgenomes.org/id/AT3G26730.6" }, { "database": "Ensembl Peptide", "id": "AT3G26730.6", "url": "https://www.ensemblgenomes.org/id/AT3G26730.6" } ] } }, { "isoform_ac": "A0A1I9LNI9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3/entry#A0A1I9LNI9-1", "sequence": { "sequence": "MSILPPPIIQGHNSSSPSSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGGSREPSVAAEEGHSRGSSKEMTQNGAGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSSSQLQHNSGPFNSPRGGVSHHNPTGRRANMISGNHLLNFQYDPISQPQSRGPPPPQRRQQYKGRPFNKDLFLKANYKFVVLDTGDHSPDSMDPDKMLQWDDIICVRYSTPSPVQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTVYIENVKQYSVGDPIEFVLLTRKKDSFAPTRKNEHDLAVPNGENEIYDPFSKFTFTQDVDLSVRQAVSELDSWIARADPQLVEDLEKHLYVNAALERLEQRKLYWNEHKLSIYSKVCTTARNQTQSLSPPDVSRVGYQAPMGGHGAPDSGSNDQDKSTEDSSADKSDGESQSSLEKGCDNDLGHPLEDQDAPSSSSCNGSKGFLSHQIDTKDLKDNDAYNFYQSVDGQHIILHTLNVKCLLHHYGSYDFLPPRLSGKILEMETITQSEAIRRRYRFLSHFSLSTTLQVYFLFVAPIFCMCCYILTFSHEVILGLVIFSDM", "length": 622, "header": "tr|A0A1I9LNI9-1|A0A1I9LNI9_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSE3-1" }, "locus": { "chromosome": "3", "start_pos": 9823637, "end_pos": 9827547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26730.4", "url": "https://www.ensemblgenomes.org/id/AT3G26730.4" }, { "database": "Ensembl Peptide", "id": "AT3G26730.4", "url": "https://www.ensemblgenomes.org/id/AT3G26730.4" } ] } }, { "isoform_ac": "A0A1I9LNJ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3/entry#A0A1I9LNJ3-1", "sequence": { "sequence": "MSILPPPIIQGHNSSSPSSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGGSREPSVAAEEGHSRGSSKEMTQNGAGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSSSQLQHNSGPFNSPRGGVSHHNPTGRRANMISGNHLLNFQYDPISQPQSRGPPPPQRRQQYKGRPFNKDLFLKANYKFVVLDTGDHSPDSMDPDKMLQWDDIICVRYSTPSPVQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTVYIENVKQYSVGDPIEFVLLTRKKDSFAPTRKNEHDLAVPNGENEIYDPFSKFTFTQDVDLSVRQAVSELDSWIARADPQLVEDLEKHLYVNAALERLEQRKLYWNEHKLSIYSKVCTTARNQTQSLSPPDVSRVGYQAPMGGHGAPDSGSNDQDKSTEDSSADKSDGESQSSLEKGCDNDLGHPLEDQDAPSSSSCNGSKGFLSHQIDTKDLKDNDAYNFYQSVDGQHIILHTLNVKCLLHHYGSYDFLPPRLSGKILEMETITQSEAIRRRYRFLSHFSLSTTLQICEIDMKESLPPDAFAPFIHEIKKREKQRKERAWKDRKNKIKAEVAAAAELVPLMASFGQSSSSDDFPPFSLDDFEALGNSAPISSSPPNIGERSSFSHVTRLGFAAGHDSPNLNNEPTNVQSSSSSSEVSNATTGNHCF", "length": 729, "header": "tr|A0A1I9LNJ3-1|A0A1I9LNJ3_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSE3-1" }, "locus": { "chromosome": "3", "start_pos": 9823637, "end_pos": 9827547, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26730.8", "url": "https://www.ensemblgenomes.org/id/AT3G26730.8" }, { "database": "Ensembl Peptide", "id": "AT3G26730.8", "url": "https://www.ensemblgenomes.org/id/AT3G26730.8" } ] } }, { "isoform_ac": "Q9LSE3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3/entry#Q9LSE3-1", "sequence": { "sequence": "MSILPPPIIQGHNSSSPSSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGGSREPSVAAEEGHSRGSSKEMTQNGAGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSSSQLQHNSGPFNSPRGGVSHHNPTGRRANMISGNHLLNFQYDPISQPQSRGPPPPQRRQQYKGRPFNKDLFLKANYKFVVLDTGDHSPDSMDPDKMLQWDDIICVRYSTPSPVQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTVYIENVKQYSVGDPIEFVLLTRKKDSFAPTRKNEHDLAVPNGENEIYDPFSKFTFTQDVDLSVRQAVSELDSWIARADPQLVEDLEKHLYVNAALERLEQRKLYWNEHKLSIYSKVCTTARNQTQSLSPPDVSRVGYQAPMGGHGAPDSGSNDQDKSTEDSSADKSDGESQSSLEKGCDNDLGHPLEDQDAPSSSSCNGSKGFLSHQIDTKDLKDNDAYNFYQSVDGQHIILHTLNVKCLLHHYGSYDFLPPRLSGKILEMETITQSEAIRRRYRFLSHFSLSTTLQICEIDMKESLPPDAFAPFIHEIKKREKQRKERAWKDRKNKIKAEVAAAAELVPLMASFGQSSSSDDFPPFSLDDFEALGNSAPISSSPPNIGERSSFSHVTRLGFAAGHDSPNLNNEPTNVQSSSSSSEVSNATTGARNTNITSFASVASRTTTPMAPTVKEPGKRGKKQSRVLLSTTSVRRY", "length": 772, "header": "tr|Q9LSE3-1|Q9LSE3_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSE3-1" }, "locus": { "chromosome": "3", "start_pos": 9823524, "end_pos": 9827467, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26730.1", "url": "https://www.ensemblgenomes.org/id/AT3G26730.1" }, { "database": "Ensembl Peptide", "id": "AT3G26730.1", "url": "https://www.ensemblgenomes.org/id/AT3G26730.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 100, "end_pos": 100, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser100" }, { "start_pos": 428, "end_pos": 428, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser428" }, { "start_pos": 430, "end_pos": 430, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser430" }, { "start_pos": 435, "end_pos": 435, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser435" }, { "start_pos": 468, "end_pos": 468, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser468" }, { "start_pos": 50, "end_pos": 50, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LNI9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LNI9" }, { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser50" }, { "start_pos": 685, "end_pos": 685, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser685" }, { "start_pos": 765, "end_pos": 765, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "site_lbl": "Ser765" }, { "start_pos": 767, "end_pos": 767, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Thr767" }, { "start_pos": 768, "end_pos": 768, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser768" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] }, { "title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LSE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSE3" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G26730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26730", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZTB6-1", "protein_name": "E3 ubiquitin-protein ligase RNF10", "gene_name": "RNF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MERIQMDPNSATIGKEKLHIPKMRTFPASPVAPIHRKAKLLTRCPLRGGGSGGSGKLFSSSNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQTGHFDGNGHGNWGKRNKWGHKPFNKELFLQANCQFVVSEEQDYTVHFADPDTLVNWDFVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYGSVHKKDLKSVVAMATRQYAIGDVITMQLMRREKGVLIALPKSQWMNVVQPVYVGDDQHSQYSKLLLASREQVLQLVILEEKAALLKQYEEEKHTPEACFIEAAIQELKEREAALSADQDKNSGVAGISAAVEELVLDSSKPMEPAVSQEKKCDVEYLSAFDEELVEPCSDVASSFLPPVESEEAVLDEEEIHEVDNIGEPEVNTRGESNPPETSYQESKETVSSGHLNSSPFYYFYQAEDGQCMYLHPVNVRCLVREYGSLEKSPEKITAAVVEIAGYSMTEDIRQRHRYLCHLPLTCEFSICELALKPPIISKETLDLFSDDIEKRKRLRQKKARDERRRERRIEIEENKKQGKYPEVHIALENLQQFPAFTSCHGETTSTDHQSFCLSPLGRSPVFQTDSIPTPFSPAASQASPSLCGSLEEESPFPSFAQMLRVGKAKPETWPKPAPKTKDENTLALPVPVESDGESDSSDRIPVPSFQNSFSQAIEAALLKLDKPSTADHLSEEKGGKKRKKQKQKLLFSTSVVHTK", "length": 749 }, "evidence": [ { "id": "Q9LSE3", "url": "https://omabrowser.org/oma/group/Q9LSE3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q06436-1", "protein_name": "E3 ubiquitin-protein ligase MAG2", "gene_name": "MAG2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVEPDMQKKASGGSGGSEMDTLNATSNSSKQGVSNNKRNPVSKKKPGNKVSDGRDNAHNYHGEGRRKSSKQQRSRTPYKETSTRINDQDIDLSIQEEILGGNFKLRGRKTQVSINHLLNFQLPEVEREKSRSSSSKKSNRRRDEHVHLHGDTFVNVNYRLLVDDRFDYPEQNCNPNVPVDQEKILRVIVPKGQNCSICLSEEPVAPRMVTCGHIFCLSCLLNFFSIEETVKNKETGYSKKKKYKECPLCGSIIGPKRVKPVLYEDDFDVTRLNQKPEPGATVHLQLMCKPHGSLLPLPVALHLDPLKCGNFPPANLGSIKHYAHIMKCGVSYSLELYQKDIVAIQEQYEIDKAIYNDSGKFVKQSIENINDQISTLLAATTDLSPLSNDINNGLDNFHFDDDLLTKYDDSSAYFFYQTLVASSTKYFLSPLDVKILLTIFHYYSKFPESIETTVENIHYDTVVTEQLIRRYKYIGHLPIGTEIALLDLDWRKIPFLPKEIYEQFAHELKQRRRKFTMKKQKEDKEKKLYEKRLEQEHAEFYRKENGNSLKFEDSVQMATHYESIVSSSIPLNSLGISMLGPPTNSCSTPQKQAPSHTKRTIWGTSIAVTEDEKASKENKEFQDMLLQRIRQEDSSDVTDSTDSPPTSNGKRGRKKKGKVMLFSSNHQALG", "length": 670 }, "evidence": [ { "id": "Q9LSE3", "url": "https://omabrowser.org/oma/group/Q9LSE3/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08E13-1", "protein_name": "E3 ubiquitin-protein ligase RNF10", "gene_name": "RNF10", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPQSSPSAAATASDMDKNSGSSSSSASSGSSKGQQPPRSASAGPAGESKPKSDGKNSSGSKRYNRKREPSYPKNENFINQSRRSNSQKSKTFNKMPPQRGGGSSKLFSSSFNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQAGHFEGSGHGSWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYTVHFADPDTLVNWDFVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESRQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPIHLGDEQHSQYSKLLLASKEQVLRRVVQEEKAALERQLAEEKHTPESCFIEAAIQELKAREEALSGLAESRGEVPGVVAALEQRVLMAPLAKESVFQPRKGVLEYLSAFDEDATEVCSLGPPHPVALPLVEEEETVSEPEPEGLSEACEDLELVEDNLGEGTICTESSQQEPVSKPSVTHLSSSPCYYFYQAEDGQHMFLHPVNVRCLVREYGSLEQSPEKISATVVEISGYSMSEDMRQRHRYLSHLPLTCEFSICELALQPPLVSKETLEIFSDDIEKRKRQRQKKAREERRRERRIEMEENKKQGKYPEVHIPLENLQQFPAFNSYTCSSDSALGSTSTEGRGALSLSPLSRSPGSQADFLLTPLSPTASQGSPSFCVGSLEEDSPFPSFAQMLRVGKAKADVWPKTAPKKDENTLGPPAPVDSDGESDNSDRVPVPSFQNSFSQAIEAAFMKLDTPVTSDPLSEEKGGKKRKKQKQKLLFSTSVVHTK", "length": 810 }, "evidence": [ { "id": "Q9LSE3", "url": "https://omabrowser.org/oma/group/Q9LSE3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UIW5-1", "protein_name": "E3 ubiquitin-protein ligase RNF10", "gene_name": "Rnf10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPQSSPSAAATASDMDKNSGSNSSSASSGSSKGQQPPRSASAGPAGESKPKSDGKNSNGSKRYNRKREPSYPKNENFSNQSRRSNSQKSKTFNKMPPQRGGGSSKPFSSSSNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQAGHFEGSGHGGWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYAAHFADPDTLVNWDFVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESRQYAVGDTITMQLMKREKGVLVALPKSKWVNVDHPINLGDEQLSQYSKLLLASKEQVLHRVVLEEKGALEQQLAEEKHTPESCFIEAAIQEVKIREEALSGVAGGGGEVTGVVAALEHLVLMAPLATESAFQPRKGVLEYLSAFDDEAAQVCSLDPPGPLALPLVEEEEAVSEPEACEDAEVADDSLGEGTVGPEMSQEEPITKPGFTQLSSSPCYYFYQAEDGQHMFLHPVNVRCLVREYGSLEQSPEKISATVVEIAGYSMSEDVRQRHRYLSHLPLTCEFSICELALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERRIEMEENKRQGRYPEVHIPLENLQQFPAFNSYTCPSDSALGPTSTEGHGALSLSPLSRSPGSHADFLLTPLSPTASQGSPSFCVGSLEDDSPFLSFAQMLRVGKAKADGWPKTAPKKDDNSLVPPAPVDSDGESDNSDRVPVPSFQNSFSQAIEAAFMKLDTPATSDPLSEDRGGKKRKRQKQKLLFSTSVVHTK", "length": 804 }, "evidence": [ { "id": "Q9LSE3", "url": "https://omabrowser.org/oma/group/Q9LSE3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { 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"length": 802 }, "evidence": [ { "id": "Q9LSE3", "url": "https://omabrowser.org/oma/group/Q9LSE3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N5U6-1", "protein_name": "E3 ubiquitin-protein ligase RNF10", "gene_name": "RNF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ribosome-associated ubiquitin-dependent protein catabolic process", "id": "GO:1990116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990116", "evidence": [ { "database": "UniProtKB", "id": "Q9LSE3", "url": "https://www.uniprot.org/uniprotkb/Q9LSE3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 13, "end_pos": 15, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" }, { "start_pos": 32, "end_pos": 34, "annotation": 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} ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 50, 100, 428, 430, 435, 468, 685, 765, 767, 768 ], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 }, { "start_pos": 13, "end_pos": 15 }, { "start_pos": 31, "end_pos": 33 }, { "start_pos": 32, "end_pos": 34 }, { "start_pos": 424, "end_pos": 426 }, { "start_pos": 500, "end_pos": 502 }, { "start_pos": 65, "end_pos": 67 }, { "start_pos": 721, "end_pos": 723 }, { "start_pos": 730, "end_pos": 732 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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{ "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 10 }, { "field": "total_sites", "count": 10 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSE9-1", "uniprot_ac": "Q9LSE9", "uniprot_id": "Q9LSE9_ARATH", "mass": { "chemical_mass": 40583.0, "monoisotopic_mass": 40583.0 }, "refseq": { "ac": "NP_189164", "name": "Ribonuclease H-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189164" }, "gene_names": [], "protein_names": [ { "name": "Ribonuclease H-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_189164", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189164" }, { "id": "Q9LSE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSE9", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9", "locus": {} } ], "crossref": [ { "id": "cd06222", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06222", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "822121", "url": "https://www.ncbi.nlm.nih.gov/gene/822121", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002156", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002156", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026960", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026960", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052929", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052929", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G25270", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G25270", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WIREIQG", "url": "https://omabrowser.org/oma/group/WIREIQG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LSE9", "url": "https://www.orthodb.org/?gene=Q9LSE9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13966", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13966", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189164", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189164", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G25270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSE9", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPEIQPPPGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFWQKRFEEAVFKWVPRTNNQPADILAKHHLQPNQSFKFHYYVPAFITSTLYYDH", "length": 343, "header": "tr|Q9LSE9-1|Q9LSE9_ARATH Isoform 1 of Ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSE9-1" }, "isoforms": [ { "isoform_ac": "Q9LSE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSE9/entry#Q9LSE9-1", "sequence": { "sequence": "MDPEIQPPPGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFWQKRFEEAVFKWVPRTNNQPADILAKHHLQPNQSFKFHYYVPAFITSTLYYDH", "length": 343, "header": "tr|Q9LSE9-1|Q9LSE9_ARATH Isoform 1 of Ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSE9-1" }, "locus": { "chromosome": "3", "start_pos": 9203934, "end_pos": 9204965, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25270.1", "url": "https://www.ensemblgenomes.org/id/AT3G25270.1" }, { "database": "Ensembl Peptide", "id": "AT3G25270.1", "url": "https://www.ensemblgenomes.org/id/AT3G25270.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LSF7", "url": "https://www.uniprot.org/uniprotkb/Q9LSF7" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "The plant B3 superfamily.", "journal": "Trends Plant Sci.", "date": "2008", "authors": "Swaminathan Kankshita, Peterson Kevin, Jack Thomas", "evidence": [ { "database": "UniProtKB", "id": "Q9LSF7", "url": "https://www.uniprot.org/uniprotkb/Q9LSF7" } ], "reference": [ { "type": "PubMed", "id": "18986826", "url": "https://glygen.org/publication/PubMed/18986826" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes 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OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSG4-1" }, "isoforms": [ { "isoform_ac": "Q9LSG4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSG4/entry#Q9LSG4-1", "sequence": { "sequence": "MSELALSSQEESPSSNKIGLSSLLLSDFHLFCSFILTHPFYFSYLLFFSPYIFKILSFLSPLFVTTTLLLLALLSTLHVQDTCLDSESLETQPSFLFSFCSKLGSVLEHKFDVNNEGFKSLEELEAYKMVVEACSMECASENEICSDELTFVDKFCSHESTVSESLTDETLEEQVEIQPLKFEDVIVLEKEEETKKCEKEEVEEQKVKHKSDVVLDNREEPTKEESKAQKVDLVGDSNNESYDLPKLSNFLGEGEGKRNVVTKNEEEDNVSLQSFGSMRKEKEWRRTLACKLFEERHNADVGQGMDQLWETYETQTEKKQQTEEEKKKLKKKTKSMMKTKSIEKEVIVEEEDDDGIDHQQLCCLQALKFSTGKMHLGIARPNLLKLSKAFKGIGRFYNANKHSKKA", "length": 406, "header": "tr|Q9LSG4-1|Q9LSG4_ARATH Isoform 1 of Acidic leucine-rich nuclear phosphoprotein 32 family B protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSG4-1" }, "locus": { "chromosome": "3", "start_pos": 9152170, "end_pos": 9153944, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25130.1", "url": "https://www.ensemblgenomes.org/id/AT3G25130.1" }, { "database": "Ensembl Peptide", "id": "AT3G25130.1", "url": "https://www.ensemblgenomes.org/id/AT3G25130.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 277, "end_pos": 277, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSG4" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ], "site_lbl": "Ser277" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSG4", "url": "https://www.uniprot.org/uniprotkb/Q9LSG4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LSG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSG4" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": 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"MSNTPEDGDGAQVTTGGLFPVFPTSANSISAISNAPQWLRNASFTTDLSVINAAASTAPSSSEVEAGDDEDEEGGADGNIGLANQARVYNLVEEEGSLESDDDKVKRKREKKKKRKSDNASDESRSRKSDEYYSKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVPGSGSLRFYLRNRRSSMLDTEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIRLSAASEAVDSSFDNFIPLEEDVTVPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLISRWEKALMQNSASYKLWREFLCVVQGEFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTSEPLDSAAIQQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSSNGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDIASANTGEVDVDRKGLDEEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVKWFEEEVSRDHSQWMPTRKAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQFIDFFGAHISPWTSSNSLSWSEKISSLETFSDSMLENLRSVHECLSKSDSANCFSLGSLLGGSCDLSMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMKTCEVATMPCQALAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKELQCNTPLLCLWYAESEVANSSGSGRDTESSSRAMHILCYLGSGLAYSPYTSQSSSMQILRARQGFREKLKKIQSTWSHGVTDDQSAALVCSAALFEELTNDLPGALEILEHMFSSVLPGRKSQSHQLELLFNYYVRMLQRHQDDLTLSQLWKPISEGLQLYPLNPELYRALVDICNHRMTSHKLRMMFDDYSRKNSSVVVWLFALSYELSKGGSSHRIRGLFERALAQDTQNNSVILWRCYIAYEIDIADNPSAARRIYFRAINACPWSKKLWLDGFGKLGSVLTAKEMSDLQEVMRDKELNIRTDIYEILLMQG", "length": 1149, "header": "tr|Q9LSH4-1|Q9LSH4_ARATH Isoform 1 of Protein NRDE2 homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSH4-1" }, "isoforms": [ { "isoform_ac": "Q9LSH4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSH4/entry#Q9LSH4-1", "sequence": { "sequence": "MSNTPEDGDGAQVTTGGLFPVFPTSANSISAISNAPQWLRNASFTTDLSVINAAASTAPSSSEVEAGDDEDEEGGADGNIGLANQARVYNLVEEEGSLESDDDKVKRKREKKKKRKSDNASDESRSRKSDEYYSKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVPGSGSLRFYLRNRRSSMLDTEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIRLSAASEAVDSSFDNFIPLEEDVTVPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLISRWEKALMQNSASYKLWREFLCVVQGEFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTSEPLDSAAIQQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSSNGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDIASANTGEVDVDRKGLDEEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVKWFEEEVSRDHSQWMPTRKAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQFIDFFGAHISPWTSSNSLSWSEKISSLETFSDSMLENLRSVHECLSKSDSANCFSLGSLLGGSCDLSMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMKTCEVATMPCQALAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKELQCNTPLLCLWYAESEVANSSGSGRDTESSSRAMHILCYLGSGLAYSPYTSQSSSMQILRARQGFREKLKKIQSTWSHGVTDDQSAALVCSAALFEELTNDLPGALEILEHMFSSVLPGRKSQSHQLELLFNYYVRMLQRHQDDLTLSQLWKPISEGLQLYPLNPELYRALVDICNHRMTSHKLRMMFDDYSRKNSSVVVWLFALSYELSKGGSSHRIRGLFERALAQDTQNNSVILWRCYIAYEIDIADNPSAARRIYFRAINACPWSKKLWLDGFGKLGSVLTAKEMSDLQEVMRDKELNIRTDIYEILLMQG", "length": 1149, "header": "tr|Q9LSH4-1|Q9LSH4_ARATH Isoform 1 of Protein NRDE2 homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSH4-1" }, "locus": { "chromosome": "3", "start_pos": 6067684, "end_pos": 6072856, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17740.1", "url": "https://www.ensemblgenomes.org/id/AT3G17740.1" }, { "database": "Ensembl Peptide", "id": "AT3G17740.1", "url": "https://www.ensemblgenomes.org/id/AT3G17740.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 24, "start_aa": "Thr", "end_pos": 24, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr24", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 100, "end_pos": 100, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser100" }, { "start_pos": 1014, "end_pos": 1014, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "site_lbl": "Thr1014" }, { "start_pos": 97, "end_pos": 97, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser97" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH4", "url": "https://www.uniprot.org/uniprotkb/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH4", "url": "https://www.uniprot.org/uniprotkb/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LSH4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSH4" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G17740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17740", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZDR9-1", "protein_name": "Nuclear exosome regulator NRDE2", "gene_name": "Nrde2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLREFCGREAERVKPHRVLRTTFPRGLRESASSNQSSPDGAISVAEVVVRPVIMALFPAFAGVSEASGDGASRKELDWLSNPSFRVGNLTSLSRQTEEVPALASEASPLTRSPLKSELSDESDTNEKLTQISKKKKKEKKKKRKHQHHKKTKRRHEQSSSSGSGSDTEAGKDRASRSIRDSQESEKARQGSNAVPAAPATGHSSIWLEDIYTLTDVFRTDKKPDPANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASAAKKHSHRHLERYFTKKNVALLRTEGIAVCSNPEPSSSEPAPFIPVKDSADVATPVTTWLNPLGIYDQSTTQWLQGQGPAEPELKQPDSQQERDSAALKARVEEFNRRVRENPRDTQLWMAFVAFQDEVMRSPGIYALGEGEQEKHRKSLKLLLEKKLAVLERAIESNPSSVELKLAKLQLCSEFWEPSALTKEWQKLLFLHPNNTSLWQRYLSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSMLSHPVLPGTEEAMFGLFLQQCHFLRQAGHSEKVVSLFQAMVDFTFFKPDSVKELPTKVQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQERGGWVLVNPDEDDEEPEEEDQEIKDKTLPRWQIWLAMERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVLFDDVGQSLIRLSSPDLQFQLIEAFLQFLGVPSGFLPPASCLYLAMDESSIFESKLYDEKPLTYFNPLFSGISCVGYMEQLDCPRWTKGHNREGEEFVRNVFHLVLPLFSGKQKCQLCLSWLRYEIAKVIWCLHTKKKRLKSQGKNCKKLAKSLLKEPENRNNLCLWRQYAHLEWLLGNTEDARKVLDAALSMAGSSDLKDRELCELSLLYAELEVELSPDSRGATTGRAVHVLTRLTESSPCGPYTGQVSSTQVLKARKAYEHALQDCLGQSCASSPPTAESLDCLGSLVKCFMLFQYLTVGIDAAVQVYRQVFSKLEGSALLEGPGPEDSASSQSVTSVLEAVTLMHTSLLRFHMNICVYPLAPLRETLSDALKLYPGNQGLWRAYVQIQNKSHSANKTRRFFDTVTRSAKHLEPWLFAIEAEKLRKRLVESVQRVGGREVHATIPETGLTHRIRALFENAIRSDQGGQCPLLWRMYLKFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAVEYFPEELQEILDVMTEKELRVRLPLEELELLLED", "length": 1218 }, "evidence": [ { "id": "Q9LSH4", "url": "https://omabrowser.org/oma/group/Q9LSH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XC6-1", "protein_name": "Nuclear exosome regulator NRDE2", "gene_name": "Nrde2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFPAFADVSEASGDGAFRKELDWLSNPSFRVGNLTSLSRQTEEVTALASEGSPPPRYSFIRSPLKSELSGESNTSEKLAQTSRKKKKEKKKRRKHQHHRKTKRRHEQLSSSGSESDTEAGKDRASRSIRDDQKEAEKPCQGSNAAAAVAAAAGHRSIWLEDIHDLTDVFRTDKKPDPANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASAAKKHSHRHLERYFTKKNVGLMRTEGIAVCSNPEPASSEPVTFIPVKDSAEAATPVTSWLNPLGIYDQSTTQWLQGQGPAEQESKQPDSQQDRENAALKARVEEFNRRVRENPWDTQLWMAFVAFQDEVMRSPGIYALGEGEQEKHRKSLKLLLEKKLAVLERAIESNPGSVELKLAKLQLCSEFWEPSALAKEWQKLLFLHPNNTSLWQRYLSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSMLSHPVLPGTEEAMFGLFLQQCHFLRQAGHSEKVISLFQAMVDFTFFKPDSVKELPTKVQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQERGGWVLITPDEDDEEPEEEDQEIKDKTLPRWQIWLAVERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSPDLQFQLIQAFLQFLGVPSGFLPPASCLYLAMDESSIFESELYDEKPLTYFNPSFSGISCVGSMEQLGRPRWTKGHNREGEEFVRNVFHLVLPLLAGKQKSQLSLSWLRYEIAKVIWCLHTKKKRLKSQGKSCKKLAKNLLKEPENRNNFCLWKQYAHLEWLLGNTEDARKVFDTALSMAGSSELKDRELCELSLLYAELEMELSPDSRGATTGRAVHILTRLTESSPYGPYTGQVSSTQVLKARKAYELALQDCLGQSCASSPAPAEALDCLGSLVRCFMLFQYLTVGIDAAVQIYGRVFAKLKGSARLEDPGPEDSTSSQSLTNVLEAVSMMHTSLLRFHMNVCVYPLAPLRETLSDALKLYPGNQVLWRAYVQIQNKSHSANKTRRFFDTVTRSAKHLEPWLFAIEAEKLRKKLVESVQRVGGREVHATIPETGLTHRIRALFENAIRSDKGNQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAMEYFPDELQEILDVMTEKELRVRLPLEELELLLED", "length": 1172 }, "evidence": [ { "id": "Q9LSH4", "url": "https://omabrowser.org/oma/group/Q9LSH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H7Z3-1", "protein_name": "Nuclear exosome regulator NRDE2", "gene_name": "NRDE2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/Q9LSH4" } ], "pmid": "" }, { "name": "negative regulation of RNA catabolic process", "id": "GO:1902369", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902369", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH4", "url": "https://www.uniprot.org/uniprotkb/Q9LSH4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1029, "end_pos": 1031, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1066, "end_pos": 1068, "annotation": "n_glycosylation_sequon" }, { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" }, { "start_pos": 853, "end_pos": 855, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" 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"sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSH5-1", "uniprot_ac": "Q9LSH5", "uniprot_id": "Q9LSH5_ARATH", "mass": { "chemical_mass": 28248.0, "monoisotopic_mass": 28248.0 }, "refseq": { "ac": "NP_188400", "name": "NAC domain containing protein 57", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400" }, "gene_names": [ { "name": "NAC057", "type": "recommended", "evidence": [ { "id": "Q9LSH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ] }, { "name": "NAC domain containing protein 57", "type": "synonym", "evidence": [ { "id": "NP_188400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400" } ] }, { "name": "NAC057", "type": "synonym", "evidence": [ { "id": "NP_188400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400" } ] }, { "name": "anac057", "type": "synonym", "evidence": [ { "id": "NP_188400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400" }, { "id": "Q9LSH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ] } ], "protein_names": [ { "name": "NAC domain containing protein 57", "type": "synonym", "evidence": [ { "id": "NP_188400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400" }, { "id": "Q9LSH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSH5", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "NAC057", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5", "locus": { "chromosome": "CP002686.1", "start_pos": 6066180, "end_pos": 6064272, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT3G17730", "url": "https://www.ensemblgenomes.org/id/AT3G17730" } ] } } ], "crossref": [ { "id": "821041", "url": "https://www.ncbi.nlm.nih.gov/gene/821041", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LSH5", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LSH5*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR003441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036093", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036093", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G17730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NGICSEM", "url": "https://omabrowser.org/oma/group/NGICSEM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LSH5", "url": "https://www.orthodb.org/?gene=Q9LSH5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31744", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31744", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31744:SF210", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31744:SF210", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02365", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02365", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188400", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188400", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G17730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G17730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSH5", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSH5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQGIRTDWVMHEYRLDDKDCDDPSSLQDSYALCRVFKKNGICSELESERQLQTGQCSFTTASMEEINSNNNNNYNNDYETMSPEVGVSSACVEEVVDDKDDSWMQFITDDAWDTSSNGAAMGHGQGVY", "length": 246, "header": "tr|Q9LSH5-1|Q9LSH5_ARATH Isoform 1 of NAC domain containing protein 57 OS=Arabidopsis thaliana OX=3702 GN=NAC057 PE=4 SV=1 CANONICAL=Q9LSH5-1" }, "isoforms": [ { "isoform_ac": "Q9LSH5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5/entry#Q9LSH5-1", "sequence": { "sequence": "MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQGIRTDWVMHEYRLDDKDCDDPSSLQDSYALCRVFKKNGICSELESERQLQTGQCSFTTASMEEINSNNNNNYNNDYETMSPEVGVSSACVEEVVDDKDDSWMQFITDDAWDTSSNGAAMGHGQGVY", "length": 246, "header": "tr|Q9LSH5-1|Q9LSH5_ARATH Isoform 1 of NAC domain containing protein 57 OS=Arabidopsis thaliana OX=3702 GN=NAC057 PE=4 SV=1 CANONICAL=Q9LSH5-1" }, "locus": { "chromosome": "3", "start_pos": 6064272, "end_pos": 6066180, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17730.1", "url": "https://www.ensemblgenomes.org/id/AT3G17730.1" }, { "database": "Ensembl Peptide", "id": "AT3G17730.1", "url": "https://www.ensemblgenomes.org/id/AT3G17730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH5", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH5", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G17730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17730", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9LSH5", "url": "https://www.uniprot.org/uniprotkb/Q9LSH5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": 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"A0A1I9LP45", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LP45-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP45-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LP46", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LP46-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSI8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVLLSSFSPLGINIDMNKNLGVSYSSFPQIHLFKGSTPLRVRTFVVSSRKNSGTGLASEDKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVVVVQPRTTHRLLQVLAGTAKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENFLERADKLVGKDGVFDYISVTPPYMEVDYEVLMDQIAKSPAIGENTFILVEYPSRTTMLDSCGCLEKMTDRRFGRTHLAIYGPKWAQKPRKS", "length": 314, "header": "tr|Q9LSI8-1|Q9LSI8_ARATH Isoform 1 of Methyltransferase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSI8-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LP45-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8/entry#A0A1I9LP45-1", "sequence": { "sequence": "MAVLLSSFSPLGINIDMNKNLGVSYSSFPQIHLFKGSTPLRVRTFVVSSRKNSGTGLASEDKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVVVVQPRTTHRLLQVLAGTAKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENFLERADKLVGKDGVFDYISVTPPYMEVDYEVLMDQIAKSPAIGENTFIVSSYIFPFLNHLIRILGQCVILVLFWTKSDLVGRVPITNNNA", "length": 312, "header": "tr|A0A1I9LP45-1|A0A1I9LP45_ARATH Computationally mapped isoform of Methyltransferase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSI8-1" }, "locus": { "chromosome": "3", "start_pos": 10672041, "end_pos": 10674456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28460.2", "url": "https://www.ensemblgenomes.org/id/AT3G28460.2" }, { "database": "Ensembl Peptide", "id": "AT3G28460.2", "url": "https://www.ensemblgenomes.org/id/AT3G28460.2" } ] } }, { "isoform_ac": "A0A1I9LP46-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8/entry#A0A1I9LP46-1", "sequence": { "sequence": "MSCGFSDSGTGLASEDKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVVVVQPRTTHRLLQVLAGTAKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENFLERADKLVGKDGVFDYISVTPPYMEVDYEVLMDQIAKSPAIGENTFILVEYPSRTTMLDSCGCLEKMTDRRFGRTHLAIYGPKWAQKPRKS", "length": 269, "header": "tr|A0A1I9LP46-1|A0A1I9LP46_ARATH Computationally mapped isoform of Methyltransferase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSI8-1" }, "locus": { "chromosome": "3", "start_pos": 10672041, "end_pos": 10674143, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28460.3", "url": "https://www.ensemblgenomes.org/id/AT3G28460.3" }, { "database": "Ensembl Peptide", "id": "AT3G28460.3", "url": "https://www.ensemblgenomes.org/id/AT3G28460.3" } ] } }, { "isoform_ac": "Q9LSI8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8/entry#Q9LSI8-1", "sequence": { "sequence": "MAVLLSSFSPLGINIDMNKNLGVSYSSFPQIHLFKGSTPLRVRTFVVSSRKNSGTGLASEDKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVVVVQPRTTHRLLQVLAGTAKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENFLERADKLVGKDGVFDYISVTPPYMEVDYEVLMDQIAKSPAIGENTFILVEYPSRTTMLDSCGCLEKMTDRRFGRTHLAIYGPKWAQKPRKS", "length": 314, "header": "tr|Q9LSI8-1|Q9LSI8_ARATH Isoform 1 of Methyltransferase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSI8-1" }, "locus": { "chromosome": "3", "start_pos": 10672041, "end_pos": 10674395, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28460.1", "url": "https://www.ensemblgenomes.org/id/AT3G28460.1" }, { "database": "Ensembl Peptide", "id": "AT3G28460.1", "url": "https://www.ensemblgenomes.org/id/AT3G28460.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 243, "start_aa": "Thr", "end_pos": 243, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr243", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 169, "end_pos": 169, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSI8" } ], "site_lbl": "Ser169" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G28460", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G28460", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "rRNA base methylation", "id": "GO:0070475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070475", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" }, { "name": "chloroplast rRNA processing", "id": "GO:1901259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901259", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" }, { "name": "rRNA methylation", "id": "GO:0031167", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031167", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "rRNA (guanine-N2-)-methyltransferase activity", "id": "GO:0008990", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008990", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" }, { "name": "16S rRNA (guanine(966)-N(2))-methyltransferase activity", "id": "GO:0052913", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052913", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LSI8", "url": "https://www.uniprot.org/uniprotkb/Q9LSI8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 243 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 169 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LSJ1-1", "uniprot_ac": "Q9LSJ1", "uniprot_id": "Q9LSJ1_ARATH", "mass": { "chemical_mass": 25411.0, "monoisotopic_mass": 25411.0 }, "refseq": { "ac": "NP_189483", "name": "Putative membrane lipoprotein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189483" }, "gene_names": [], "protein_names": [ { "name": "Membrane lipoprotein", "type": "synonym", "evidence": [ { "id": "Q9LSJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSJ1/entry#names_and_taxonomy" } ] }, { "name": "Putative membrane lipoprotein", "type": "synonym", "evidence": [ { "id": "NP_189483", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189483" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSJ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSJ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSJ1", "locus": {} } ], "crossref": [ { "id": "822472", "url": "https://www.ncbi.nlm.nih.gov/gene/822472", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G28420", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G28420", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEQWRAW", "url": "https://omabrowser.org/oma/group/MEQWRAW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35997", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35997", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35997:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35997:SF5", 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"url": "https://www.uniprot.org/uniprotkb/Q9LSM3" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSM3", "url": "https://www.uniprot.org/uniprotkb/Q9LSM3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G65520", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G65520", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSN1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSN1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTHVEDDKEFKEKPLVQVLSDDDSEVKEAKDGGGEEVTGGDGEGEANVEEEDDEAENEDDDDDDDDDDDDDEDEDDEEGEEDLGTEYLVRPVGEVEDEDDASDFDPEENGLDEEEGDEEIEEDDVDEDISLSAGKSEPLSKRKRVAKDHSEQGDVTGDNIRPSKR", "length": 165, "header": "tr|Q9LSN1-1|Q9LSN1_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSN1-1" }, "isoforms": [ { "isoform_ac": "Q9LSN1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1/entry#Q9LSN1-1", "sequence": { "sequence": "MTHVEDDKEFKEKPLVQVLSDDDSEVKEAKDGGGEEVTGGDGEGEANVEEEDDEAENEDDDDDDDDDDDDDEDEDDEEGEEDLGTEYLVRPVGEVEDEDDASDFDPEENGLDEEEGDEEIEEDDVDEDISLSAGKSEPLSKRKRVAKDHSEQGDVTGDNIRPSKR", "length": 165, "header": "tr|Q9LSN1-1|Q9LSN1_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSN1-1" }, "locus": { "chromosome": "3", "start_pos": 5852049, "end_pos": 5853080, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17160.1", "url": "https://www.ensemblgenomes.org/id/AT3G17160.1" }, { "database": "Ensembl Peptide", "id": "AT3G17160.1", "url": "https://www.ensemblgenomes.org/id/AT3G17160.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, 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C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G17160", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17160", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN1", "url": 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"Enzyme and Pathway" ] }, { "id": "QALCIST", "url": "https://omabrowser.org/oma/group/QALCIST/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LSN2", "url": "https://www.orthodb.org/?gene=Q9LSN2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR36710", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36710", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36710:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36710:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04043", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04043", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001078166", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078166", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G17152", "url": 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"MNIYIYLFAIFVVLSQIQIALSQTIQSPPGSSLVQRLCKRNRYQALCISTLNVDPRSKTSNLQGLASISLDATTKKFNVTLTYYISVLKNVRGRVDFERYGTCIEEYGAAVDRFLPAVKADLKAKKYPEAMSEMKDVVAKPGYCEDQFAGESPVTARNKAVHDIADMTADIIKTL", "length": 175, "header": "tr|Q9LSN2-1|Q9LSN2_ARATH Isoform 1 of Plant invertase/pectin methylesterase inhibitor superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSN2-1" }, "locus": { "chromosome": "3", "start_pos": 5848787, "end_pos": 5849660, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17152.1", "url": "https://www.ensemblgenomes.org/id/AT3G17152.1" }, { "database": "Ensembl Peptide", "id": "AT3G17152.1", "url": "https://www.ensemblgenomes.org/id/AT3G17152.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN2", "url": "https://www.uniprot.org/uniprotkb/Q9LSN2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", 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} ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN4", "url": "https://www.uniprot.org/uniprotkb/Q9LSN4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G17130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "enzyme inhibitor activity", "id": "GO:0004857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004857", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN4", "url": "https://www.uniprot.org/uniprotkb/Q9LSN4" } ], "pmid": "" } ] }, 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"name": "Plant self-incompatibility protein S1 family", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188333" }, "gene_names": [], "protein_names": [ { "name": "S-protein homolog", "type": "recommended", "evidence": [ { "id": "Q9LSN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9/entry#names_and_taxonomy" } ] }, { "name": "Plant self-incompatibility protein S1 family", "type": "synonym", "evidence": [ { "id": "NP_188333", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188333" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9", "locus": {} } ], "crossref": [ { "id": "AT3G17080", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G17080", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820965", "url": "https://www.ncbi.nlm.nih.gov/gene/820965", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010264", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010264", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G17080", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17080", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CHFWWGF", "url": "https://omabrowser.org/oma/group/CHFWWGF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31232", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31232", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31232:SF67", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31232:SF67", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05938", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05938", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188333", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188333", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G17080", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G17080", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSN9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSLETCLLFFVMVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSWD", "length": 134, "header": "tr|Q9LSN9-1|Q9LSN9_ARATH Isoform 1 of S-protein homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSN9-1" }, "isoforms": [ { "isoform_ac": "Q9LSN9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9/entry#Q9LSN9-1", "sequence": { "sequence": "MGSLETCLLFFVMVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSWD", "length": 134, "header": "tr|Q9LSN9-1|Q9LSN9_ARATH Isoform 1 of S-protein homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSN9-1" }, "locus": { "chromosome": "3", "start_pos": 5825289, "end_pos": 5825867, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17080.1", "url": "https://www.ensemblgenomes.org/id/AT3G17080.1" }, { "database": "Ensembl Peptide", "id": "AT3G17080.1", "url": "https://www.ensemblgenomes.org/id/AT3G17080.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G17080", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17080", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "rejection of self pollen", "id": "GO:0060320", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060320", "evidence": [ { "database": "UniProtKB", "id": "Q9LSN9", "url": "https://www.uniprot.org/uniprotkb/Q9LSN9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 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"uniprot_canonical_ac": "Q9LSP5-1", "uniprot_ac": "Q9LSP5", "uniprot_id": "Q9LSP5_ARATH", "mass": { "chemical_mass": 17776.0, "monoisotopic_mass": 17776.0 }, "refseq": { "ac": "NP_566564", "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566564" }, "gene_names": [], "protein_names": [ { "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_566564", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566564" }, { "id": "Q9LSP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSP5", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5", "locus": {} } ], "crossref": [ { "id": "AT3G17020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G17020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd23659", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23659", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820958", "url": "https://www.ncbi.nlm.nih.gov/gene/820958", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LSP5", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LSP5*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR006015", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006015", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014729", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014729", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G17020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PLQRVIM", "url": "https://omabrowser.org/oma/group/PLQRVIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LPQ2", "url": "https://www.orthodb.org/?gene=A0A1I9LPQ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LSP5", "url": "https://www.orthodb.org/?gene=Q9LSP5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46100", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46100", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46100:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46100:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00582", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00582", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566564", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566564", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G17020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G17020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LPQ2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPQ2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSP5", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAESGGRRIGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPLSSLVMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVKAHI", "length": 163, "header": "tr|Q9LSP5-1|Q9LSP5_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSP5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPQ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5/entry#A0A1I9LPQ2-1", "sequence": { "sequence": "MAESGGRRIGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETLDIVNTAARKKTSIKIMIPKDGDLPVADSL", "length": 116, "header": "tr|A0A1I9LPQ2-1|A0A1I9LPQ2_ARATH Computationally mapped isoform of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSP5-1" }, "locus": { "chromosome": "3", "start_pos": 5802493, "end_pos": 5804210, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17020.2", "url": "https://www.ensemblgenomes.org/id/AT3G17020.2" }, { "database": "Ensembl Peptide", "id": "AT3G17020.2", "url": "https://www.ensemblgenomes.org/id/AT3G17020.2" } ] } }, { "isoform_ac": "Q9LSP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5/entry#Q9LSP5-1", "sequence": { "sequence": "MAESGGRRIGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPLSSLVMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVKAHI", "length": 163, "header": "tr|Q9LSP5-1|Q9LSP5_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSP5-1" }, "locus": { "chromosome": "3", "start_pos": 5802536, "end_pos": 5804282, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17020.1", "url": "https://www.ensemblgenomes.org/id/AT3G17020.1" }, { "database": "Ensembl Peptide", "id": "AT3G17020.1", "url": "https://www.ensemblgenomes.org/id/AT3G17020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSP5", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSP5", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G17020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G17020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": 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"total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9LSP5", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LSP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSP5" }, { "id": "PF00582", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00582" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UspA", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 160, "start_aa": "Arg", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { 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"https://www.uniprot.org/uniprotkb/Q9LSQ1/entry#names_and_taxonomy" } ] }, { "name": "LURP-one-like protein (DUF567)", "type": "synonym", "evidence": [ { "id": "NP_188315", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188315" } ] } ], "function": [ { "annotation": "Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": 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"PRO", "categories": [ "Protein" ] }, { "id": "NP_188315", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188315", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G16900", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G16900", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKQDPTSSNTMLPLVGSEFVRPQPLDLTITGDTVKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIYVADSTKIIAQVYEGHERLVATIYPNVDYAFIVTLIFIFDLINMGTGI", "length": 185, "header": "sp|Q9LSQ1-1|LOR13_ARATH Isoform 1 of Protein LURP-one-related 13 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LSQ1-1" }, "isoforms": [ { "isoform_ac": "Q9LSQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1/entry#Q9LSQ1-1", "sequence": { "sequence": "MAKQDPTSSNTMLPLVGSEFVRPQPLDLTITGDTVKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIYVADSTKIIAQVYEGHERLVATIYPNVDYAFIVTLIFIFDLINMGTGI", "length": 185, "header": "sp|Q9LSQ1-1|LOR13_ARATH Isoform 1 of Protein LURP-one-related 13 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LSQ1-1" }, "locus": { "chromosome": "3", "start_pos": 5772080, "end_pos": 5773071, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G16900.1", "url": "https://www.ensemblgenomes.org/id/AT3G16900.1" }, { "database": "Ensembl Peptide", "id": "AT3G16900.1", "url": "https://www.ensemblgenomes.org/id/AT3G16900.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G16900", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G16900", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 63, "end_pos": 65, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LSQ1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 185, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LSQ1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LSQ1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], 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"database": "Ensembl Transcript", "id": "AT5G54480.1", "url": "https://www.ensemblgenomes.org/id/AT5G54480.1" }, { "database": "Ensembl Peptide", "id": "AT5G54480.1", "url": "https://www.ensemblgenomes.org/id/AT5G54480.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 469, "end_pos": 469, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LSQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSQ7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Ser469" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ7" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LSQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSQ7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G54480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G54480", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LSQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 461, "end_pos": 463, "annotation": "n_glycosylation_sequon" }, { "start_pos": 523, "end_pos": 525, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LSQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ7" }, { "id": "PF04783", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04783" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF630", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 60, "start_aa": "Met", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9LSQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSQ7" }, { "id": "PF04782", 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superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSU4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSC3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSU4/entry#A0A1I9LSC3-1", "sequence": { "sequence": "MKIIEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWMSIGHGEYSEIHSEKDFFSVVKSSERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEKSPFLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYEGESSLKQKSTTQVRRNVRQSARSDSDSE", "length": 205, "header": "tr|A0A1I9LSC3-1|A0A1I9LSC3_ARATH Computationally mapped isoform of Thioredoxin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSU4-1" }, "locus": { "chromosome": "3", "start_pos": 9292418, "end_pos": 9294456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25580.2", "url": "https://www.ensemblgenomes.org/id/AT3G25580.2" }, { "database": "Ensembl Peptide", "id": "AT3G25580.2", "url": "https://www.ensemblgenomes.org/id/AT3G25580.2" } ] } }, { "isoform_ac": "Q9LSU4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSU4/entry#Q9LSU4-1", "sequence": { "sequence": "MANPIQEIIEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWMSIGHGEYSEIHSEKDFFSVVKSSERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEKSPFLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYEGESSLKQKSTTQVRRNVRQSARSDSDSE", "length": 210, "header": "tr|Q9LSU4-1|Q9LSU4_ARATH Isoform 1 of Thioredoxin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSU4-1" }, "locus": { "chromosome": "3", "start_pos": 9292345, "end_pos": 9294438, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25580.1", "url": "https://www.ensemblgenomes.org/id/AT3G25580.1" }, { "database": "Ensembl Peptide", "id": "AT3G25580.1", "url": "https://www.ensemblgenomes.org/id/AT3G25580.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSU4", "url": "https://www.uniprot.org/uniprotkb/Q9LSU4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, 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"https://omabrowser.org/oma/group/Q9LSU4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LSU4", "url": "https://www.uniprot.org/uniprotkb/Q9LSU4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "Q9LSU4", "url": "https://www.uniprot.org/uniprotkb/Q9LSU4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ 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"Q9LSU8", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8", "locus": {} } ], "crossref": [ { "id": "Q9LSU8", "url": "https://alphafold.ebi.ac.uk/entry/Q9LSU8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G25550", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G25550", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822142", "url": "https://www.ncbi.nlm.nih.gov/gene/822142", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G25550", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G25550", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WRRMITS", "url": "https://omabrowser.org/oma/group/WRRMITS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LSU8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LSU8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_566771", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566771", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G25550", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25550", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSU8", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSU8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIMHHGRESKRRRRQVIKIPNDDVLEEIIVRLPVKTLTRFQTVSKHWRHTIKSRNGSKPSIRYKTMRLEWSLSRLVGEEEYLTSKKHKERRILFSKSVDGLFCLYSGVDMKQPIMVINPDTRWSKKLPLARIQRKNYLDSNKVEFSRLGFGKDSVTGTYKLAVIPPPPNHGIKHENMSF", "length": 179, "header": "sp|Q9LSU8-1|FB326_ARATH Isoform 1 of Probable F-box protein At3g25550 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9LSU8-1" }, "isoforms": [ { "isoform_ac": "Q9LSU8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8/entry#Q9LSU8-1", "sequence": { "sequence": "MIMHHGRESKRRRRQVIKIPNDDVLEEIIVRLPVKTLTRFQTVSKHWRHTIKSRNGSKPSIRYKTMRLEWSLSRLVGEEEYLTSKKHKERRILFSKSVDGLFCLYSGVDMKQPIMVINPDTRWSKKLPLARIQRKNYLDSNKVEFSRLGFGKDSVTGTYKLAVIPPPPNHGIKHENMSF", "length": 179, "header": "sp|Q9LSU8-1|FB326_ARATH Isoform 1 of Probable F-box protein At3g25550 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9LSU8-1" }, "locus": { "chromosome": "3", "start_pos": 9278878, "end_pos": 9279587, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25550.1", "url": "https://www.ensemblgenomes.org/id/AT3G25550.1" }, { "database": "Ensembl Peptide", "id": "AT3G25550.1", "url": "https://www.ensemblgenomes.org/id/AT3G25550.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LSU8", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSU8", "url": "https://www.uniprot.org/uniprotkb/Q9LSU8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G25550", "name": "", "url": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32319:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32319:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01479", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01479", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01728", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01728", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566765", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566765", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G25470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSV5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGFHVLRPPIALRSSLLGFLSKSHNPLLPGRWVQAGECSTMRCFASATRGKNKKQRLDEACVERFNEYSRTLIQSWIMQGKVLVDGRRVIKAGMPVSTTAAIKITAEVPKFVCRGGLKLEAALEKLDVDVSEKVVLDAGLSTGGFTDCLLRYGAAHVYGVDVGYGQVADKIRNDKKVTVIERTNLRYLPGLPQKVDVVTLDLSFISILKVMPAIMNVMKEDATLVTLVKPQFEARRQQVGKGGIVRDPEVHQEVLEKIINGVERYGFTNKGFIESPIKGADGNIEFLACFNRGTVKPEAEE", "length": 301, "header": "tr|Q9LSV5-1|Q9LSV5_ARATH Isoform 1 of Bacterial hemolysin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSV5-1" }, "isoforms": [ { "isoform_ac": "Q9LSV5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5/entry#Q9LSV5-1", "sequence": { "sequence": "MGFHVLRPPIALRSSLLGFLSKSHNPLLPGRWVQAGECSTMRCFASATRGKNKKQRLDEACVERFNEYSRTLIQSWIMQGKVLVDGRRVIKAGMPVSTTAAIKITAEVPKFVCRGGLKLEAALEKLDVDVSEKVVLDAGLSTGGFTDCLLRYGAAHVYGVDVGYGQVADKIRNDKKVTVIERTNLRYLPGLPQKVDVVTLDLSFISILKVMPAIMNVMKEDATLVTLVKPQFEARRQQVGKGGIVRDPEVHQEVLEKIINGVERYGFTNKGFIESPIKGADGNIEFLACFNRGTVKPEAEE", "length": 301, "header": "tr|Q9LSV5-1|Q9LSV5_ARATH Isoform 1 of Bacterial hemolysin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LSV5-1" }, "locus": { "chromosome": "3", "start_pos": 9232821, "end_pos": 9235215, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25470.1", "url": "https://www.ensemblgenomes.org/id/AT3G25470.1" }, { "database": "Ensembl Peptide", "id": "AT3G25470.1", "url": "https://www.ensemblgenomes.org/id/AT3G25470.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G25470", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G25470", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LSV5", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LSV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSV5" }, { "id": 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"database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LSV6", "url": "https://www.uniprot.org/uniprotkb/Q9LSV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LSV6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMMPELPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQSLILMWKNFGFSSISINLQRVSPIEVTGELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINTRLVVWNPCTGKTKWIQHRRMGYICNYALGSYQDKKSDNNSYKILSHGIYGGQEFEIYEINSNSWRILDVTVDSSLYIENVSLKGKTYWFATDGNDKPCDLFLICFDYTTERFERLCLPYQIPYFRNTSLSVVKEEKLSVLLQPSLTSKTQIWVTNKIGEAKVLSWIKFLTVDLKPEIKYGIKFLVDEENKVLVYEQNFVINGKNNMIYVVGEDNEVREVVFRVGLKPLFFYYVPSLTQIRQGND", "length": 361, "header": "sp|Q9LSV6-1|FB186_ARATH Isoform 1 of Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSV6-1" }, "isoforms": [ { "isoform_ac": "Q9LSV6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSV6/entry#Q9LSV6-1", "sequence": { "sequence": "MMMPELPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQSLILMWKNFGFSSISINLQRVSPIEVTGELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINTRLVVWNPCTGKTKWIQHRRMGYICNYALGSYQDKKSDNNSYKILSHGIYGGQEFEIYEINSNSWRILDVTVDSSLYIENVSLKGKTYWFATDGNDKPCDLFLICFDYTTERFERLCLPYQIPYFRNTSLSVVKEEKLSVLLQPSLTSKTQIWVTNKIGEAKVLSWIKFLTVDLKPEIKYGIKFLVDEENKVLVYEQNFVINGKNNMIYVVGEDNEVREVVFRVGLKPLFFYYVPSLTQIRQGND", "length": 361, "header": "sp|Q9LSV6-1|FB186_ARATH Isoform 1 of Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LSV6-1" }, "locus": { "chromosome": "3", "start_pos": 9231581, "end_pos": 9232666, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25460.1", "url": "https://www.ensemblgenomes.org/id/AT3G25460.1" }, { "database": "Ensembl Peptide", "id": "AT3G25460.1", "url": "https://www.ensemblgenomes.org/id/AT3G25460.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": 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Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LSX5", "url": "https://www.uniprot.org/uniprotkb/Q9LSX5" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LSX5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LSX5" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LSX5", "url": "https://www.uniprot.org/uniprotkb/Q9LSX5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G41750", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G41750", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9LSX5", "url": "https://www.uniprot.org/uniprotkb/Q9LSX5" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9LSX5", "url": "https://www.uniprot.org/uniprotkb/Q9LSX5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ADP binding", "id": "GO:0043531", "url": 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"database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47978", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47978", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00071", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00071", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08477", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08477", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_850622", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850622", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G21700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G21700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4IXP2", "url": "https://www.uniprot.org/uniprotkb/F4IXP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IXP2-1", "url": 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"MAQSCLKIVRINNLRNRVNRRILILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGGEFVRRSSVVYDNDNSHRRSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISYSIWELEAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQVMFLTISFEVI", "length": 248, "header": "tr|F4IXP2-1|F4IXP2_ARATH Computationally mapped isoform of Ras-related small GTP-binding family protein OS=Arabidopsis thaliana OX=3702 GN=SGP2 PE=4 SV=1 CANONICAL=Q9LSZ4-1" }, "locus": { "chromosome": "3", "start_pos": 7644475, "end_pos": 7646573, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21700.2", "url": "https://www.ensemblgenomes.org/id/AT3G21700.2" }, { "database": "Ensembl Peptide", "id": "AT3G21700.2", "url": "https://www.ensemblgenomes.org/id/AT3G21700.2" } ] } }, { "isoform_ac": "Q9LSZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LSZ4/entry#Q9LSZ4-1", "sequence": { "sequence": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048981", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048981", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G19870", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19870", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SEPFNHA", "url": "https://omabrowser.org/oma/group/SEPFNHA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34033", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34033", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34033:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34033:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21588", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21588", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21590", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21590", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001327307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327307", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G19870", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G19870", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JCE9", "url": "https://www.uniprot.org/uniprotkb/F4JCE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JCE9-1", "url": "https://www.uniprot.org/uniprotkb/F4JCE9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT22", "url": "https://www.uniprot.org/uniprotkb/Q9LT22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT22-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTTTPEKTPARPLSIQDWDVLIDDFRDAGAPRDWFTSVFQIDSLVDFALSSLLKKDFPTPVKLSILVFLDEFSPILFDNCGSDTFDRFIDVLRTIVQSPTDGSSGLKEQAMVSFTSVLVSIDSFSVGHVEAVVDLLLALVNRPNHGFDRQARAIACECLRQLEKAFPGLLSDVAGHLWSLCQAERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDESSIMSQGQGLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSFDPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKHMLSGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQDCLVSVSDFKWLPPWSSETELAFRTLHKFLICASTHSDSDPSTTRILMESSLFQNVQGLLVDMTLEFQILVPVIVAFIERLIHCHKHQWLGERFLQIVDENLLPKLKKKNLLTAYFPLFHRIAENDTIPPSRLIELLTKFVISLVEKRGLDVGLKLWDQGTEVLGICRTLMSHHKSSRLFLGLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVTPSTHSSTFFSVQSPRFRHDPSKSRNLSSYIHLERVTPLLVKQSWSLSLPSLSVGTDGYSIIENKIQVDEVEPDGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTLRLDAEPYSSIWGSETQKIDLEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPHWNSNVPNEEVSLDIVVVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMIQGKLESVPVGIEDMFLKALAPPDEPEDTIPSYYSDLFNALWEVCGSSSSTAHETFALKGGKMAAAVSGTRSVKLLEVPAETVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEEEEEQGDHTNADQPSSSSVGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGTIKMLMFLPPRYHLMFEMEVGQGSTLVHIRTDYWPCLAYVDDYLEALFL", "length": 1117, "header": "tr|Q9LT22-1|Q9LT22_ARATH Isoform 1 of AP-5 complex subunit beta-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT22-1" }, "isoforms": [ { "isoform_ac": "F4JCE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT22/entry#F4JCE9-1", "sequence": { "sequence": "MTTTTPEKTPARPLSIQDWDVLIDDFRDAGAPRDWFTSVFQIDSLVDFALSSLLKKDFPTPVKLSILVFLDEFSPILFDNCGSDTFDRFIDVLRTIVQSPTDGSSGLKEQAMVSFTSVLVSIDSFSVGHVEAVVDLLLALVNRPNHGFDRQARAIASERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDESSIMSQGQGLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSFDPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKHMLSGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQDCLVSVSDFKWLPPWSSETELAFRTLHKFLICASTHSDSDPSTTRILMESSLFQNVQGLLVDMTLEFQILVPVIVAFIERLIHCHKHQWLGERFLQIVDENLLPKLKKKNLLTAYFPLFHRIAENDTIPPSRLIELLTKFVISLVEKRGLDVGLKLWDQGTEVLGICRTLMSHHKSSRLFLGLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVTPSTHSSTFFSVQSPRFRHDPSKSRNLSSYIHLERVTPLLVKQSWSLSLPSLSVGTDGYSIIENKIQVDEVEPDGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTLRLDAEPYSSIWGSETQKIDLEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPHWNSNVPNEEVSLDIVVVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMIQGKLESVPVGIEDMFLKALAPPDEPEDTIPSYYSDLFNALWEVCGSSSSTAHETFALKGGKMAAAVSGTRSVKLLEVPAETVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEEEEEQGDHTNADQPSSSSVGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGTIKMLMFLPPRYHLMFEMEVGQGSTLVHIRTDYWPCLAYVDDYLEALFL", "length": 1090, "header": "tr|F4JCE9-1|F4JCE9_ARATH Computationally mapped isoform of AP-5 complex subunit beta-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT22-1" }, "locus": { "chromosome": "3", "start_pos": 6907395, "end_pos": 6911233, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19870.1", "url": "https://www.ensemblgenomes.org/id/AT3G19870.1" }, { "database": "Ensembl Peptide", "id": "AT3G19870.1", "url": "https://www.ensemblgenomes.org/id/AT3G19870.1" } ] } }, { "isoform_ac": "Q9LT22-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT22/entry#Q9LT22-1", "sequence": { "sequence": "MTTTTPEKTPARPLSIQDWDVLIDDFRDAGAPRDWFTSVFQIDSLVDFALSSLLKKDFPTPVKLSILVFLDEFSPILFDNCGSDTFDRFIDVLRTIVQSPTDGSSGLKEQAMVSFTSVLVSIDSFSVGHVEAVVDLLLALVNRPNHGFDRQARAIACECLRQLEKAFPGLLSDVAGHLWSLCQAERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDESSIMSQGQGLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSFDPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKHMLSGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQDCLVSVSDFKWLPPWSSETELAFRTLHKFLICASTHSDSDPSTTRILMESSLFQNVQGLLVDMTLEFQILVPVIVAFIERLIHCHKHQWLGERFLQIVDENLLPKLKKKNLLTAYFPLFHRIAENDTIPPSRLIELLTKFVISLVEKRGLDVGLKLWDQGTEVLGICRTLMSHHKSSRLFLGLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVTPSTHSSTFFSVQSPRFRHDPSKSRNLSSYIHLERVTPLLVKQSWSLSLPSLSVGTDGYSIIENKIQVDEVEPDGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTLRLDAEPYSSIWGSETQKIDLEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPHWNSNVPNEEVSLDIVVVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMIQGKLESVPVGIEDMFLKALAPPDEPEDTIPSYYSDLFNALWEVCGSSSSTAHETFALKGGKMAAAVSGTRSVKLLEVPAETVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEEEEEQGDHTNADQPSSSSVGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGTIKMLMFLPPRYHLMFEMEVGQGSTLVHIRTDYWPCLAYVDDYLEALFL", "length": 1117, "header": "tr|Q9LT22-1|Q9LT22_ARATH Isoform 1 of AP-5 complex subunit beta-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT22-1" }, "locus": { "chromosome": "3", "start_pos": 6907053, "end_pos": 6911246, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19870.2", "url": "https://www.ensemblgenomes.org/id/AT3G19870.2" }, { "database": "Ensembl Peptide", "id": "AT3G19870.2", "url": "https://www.ensemblgenomes.org/id/AT3G19870.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 648, "start_aa": "Thr", "end_pos": 648, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr648", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 882, "start_aa": "Thr", "end_pos": 882, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr882", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 595, "end_pos": 595, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LT22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT22" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser595" }, { "start_pos": 661, "end_pos": 661, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LT22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT22" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser661" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LT22", "url": "https://www.uniprot.org/uniprotkb/Q9LT22" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LT22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT22" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LT22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT22" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LT22", "url": "https://www.uniprot.org/uniprotkb/Q9LT22" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9LT22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT22" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ], "pathway": [ { "id": "ath:AT3G19870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19870", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54SJ9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSSSYSSNEWYTIIQNWRNQKYYIPTINIVQPQQSSSNLSSLVTQILSGDDSIQDHQDITHSSISSNNNSSNSNNNNSNGSTNLMVDQLLKALKNEKDDILRINLLLFLQENSSILLEDDLKRFERVFSILQSLIFSQTDSYPIKSQVLTTITTVLICESLIKTNPKFIEIFIELLLDIISKINTSPDRLLKGSACNCLLEFELTYPCILSEFKPLIMSYCQQENTHLIQNYTVLLSAILQNVTLSTYEEANTIQNSIILSGGTINNNNNNNNSNNSSIISNNQNSIGSMFGTIVSPTTNTLSLPLSSPLSQSYQQPPPQQQQQHSSIRSMMISPPTTTITSSSSSSSQMSTSFSQQQQQQQQSYSSSNNLNNFIGGGGGNSAQNSLNYGSSRRSALLPLPNIFTDSDPTLRNSTYSIPPTVKFSPISLERINNNNEIFFRSRSSNLQPTNGSFKSQNTTSSSSSSSSNNNNNNNNVKLSESFEKDIFKCASTIADQSAYLNQWGLVTIIQQLIPLIDLVSIPHNFFKNHLHLLYKLFFTDNTLQFHIVLYLTLVFPDLYSQDEFDYCLKRLISIINDISLSLENRIFAIDWLLSLPNKVLKNQQQQQPLSIFQFYPNFYPTSFDNIFLKEAKLYALCKCLSNSTLNISISPEINFGNKIFFFFFFFFFFFFKKKSELLKSLICLEEFKHNNENSISTRIVFSNLLLLLSNFPTMMFGCIEKYLCDILINYPQFLNVIICLSNGIQNQRTKINLFLSLCRMILQLKPLRFLQYLPLVERVVVEDQIDPTSLLEKTFELVKRKKILTLGNWYIGNIILSICRRSLMYHNTIVVAKPLKLILSNLFSYFSNLEIRDRASFYQLLISHLPDDKIKTILNTLQNDETNVSGLLSTPLTSDKNKLIKSVPNFISISQILDREISNSIQSTLLIYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSPTTPILDSSNNDDFEFSFQNYLSLLMDPTKLEAKIIIPYQIRYKKHINNNNINNKINNNDKINNNNNNNNNNNGDGKNNNDNNNIDDDINKIKSGSISNSSSLSGIGINIGIGIGNNTPLKVYALLIQLQQSPYYLPINPIRIPYLCHPNNDLLENNNYNYNNNSGNSGNSGNNSFNNLQTIEQQQQIVESKLKEFPYCYDIDLSFTPIYPIPTSFSIKMVFNDDEGKTCKSDGSLISIQFSDLFMNVPIPWNLNSTIEEINQFQSKLFNLLWNTNTPTTSQPIPMTNSVKQWNISRNLIKKIINLKLSKFLIINNNNNNDDNQKEKENIKVINRQEESAINSNSNSNGCGEKLKIENDILNLLIFLPPQFHLLLKFDIGDDSTIVYVKTDYWRCLVFLDQYLSSLINTFIIE", 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"id": "PF21588", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21588" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AP5B1 middle", "eco_id": "ECO_0000259", "start_pos": 245, "end_pos": 633, "start_aa": "Asp", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 648, 882 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 595, 661 ], "sequon_annotation_sites": [ { "start_pos": 544, "end_pos": 546 }, { "start_pos": 673, "end_pos": 675 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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}, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LT29-1", "uniprot_ac": "Q9LT29", "uniprot_id": "Q9LT29_ARATH", "mass": { "chemical_mass": 18633.0, "monoisotopic_mass": 18633.0 }, "refseq": { "ac": "NP_001078190", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078190" }, "gene_names": [ { "name": "MMB12.25", "type": "recommended", "evidence": [ { "id": "Q9LT29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT29" } ] }, { "name": "MMB12.25", "type": "synonym", "evidence": [ { "id": "NP_001078190", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078190" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LT29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT29/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001078190", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078190" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LT29", "url": "https://www.uniprot.org/uniprotkb/Q9LT29" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MMB12.25", "url": "https://www.uniprot.org/uniprotkb/Q9LT29", "locus": {} } ], "crossref": [ { "id": "821516", "url": "https://www.ncbi.nlm.nih.gov/gene/821516", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G19790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EMINEWY", "url": "https://omabrowser.org/oma/group/EMINEWY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LT29", "url": "https://www.orthodb.org/?gene=Q9LT29", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "NP_001078190", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078190", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G19790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G19790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LT29", "url": 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thaliana OX=3702 GN=MMB12.25 PE=1 SV=1 CANONICAL=Q9LT29-1" }, "locus": { "chromosome": "3", "start_pos": 6874748, "end_pos": 6875911, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19790.1", "url": "https://www.ensemblgenomes.org/id/AT3G19790.1" }, { "database": "Ensembl Peptide", "id": "AT3G19790.1", "url": "https://www.ensemblgenomes.org/id/AT3G19790.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LT29", "url": "https://www.uniprot.org/uniprotkb/Q9LT29" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LT29", "url": "https://www.uniprot.org/uniprotkb/Q9LT29" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G19790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19790", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LT29", "url": "https://www.uniprot.org/uniprotkb/Q9LT29" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 102, "end_pos": 104, "annotation": "n_glycosylation_sequon" }, { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 102, "end_pos": 104 }, { "start_pos": 159, "end_pos": 161 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LT39", "url": "https://www.uniprot.org/uniprotkb/Q9LT39" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9LT39", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT39" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": 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"categories": [ "Protein Classification" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G27500", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27500", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ERTEFEC", "url": "https://omabrowser.org/oma/group/ERTEFEC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF154", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF154", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189387", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189387", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G27500", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27500", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQN0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQN0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQN1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQN1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT62", "url": "https://www.uniprot.org/uniprotkb/Q9LT62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT62-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT62-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTYELEELEGHEHLVSRVKHHDGLECDACDRLNVDGYSCSECKFNIHVACTFVFDKQEIVDHPSHDGHSLKLLTTGAPDHTDPKCHLCGNNTKRLLFHCSVCQLNLDIFCIADHLLGPEYLNMPWHPHPLLCFDFGSRNWCDFCNENYEGQGYLCYRCGLRIHEKCVVELQEITQHPSHVRHPLKLLTSGAPNYTNPRCHICGEDTGNLLYHCDICKFNLDLQCAIKSSPPVALSNMKVHEHTLTLMPKLISFVCDACGTKGDRSPYICVQCDFMTFHQKCARLPRVIHVNHHDHRVSFKYPLGPGDWRCGVCWDEIDWSYGAYSCSLCSRYAIHSLCATRDDVWDGEELDGVPEEIEDIEPFKRNDDNTIDHFSHRHNHMSLDKGGEESSFCKACAHPIGSSSSLYKCSECSFILHETCANLPMKKRHFLSPQPLTLSYHRLQRRWGVEICEACQQIFCKGFIYSSYLEENFDLPCSSITVPFIHGSHDHHLLYLKLENGNVKTCQGCGIDEKRVAIGCTKCNYFLDFRCATLPLTVTLSRYDDHPLTLCYGDEKASGKYWCDICERETNPKTWFYTCNDCGVTLHVLCVVGDVRYAKPKAMIEYYIELLSNNSSSRPFCHNCYCRCPGPFILRIRKQHDAHLGGEYYIFFCSYYCYIITKSKKEYSKIKLRCPPWRSGHQSQLMELQNDQ", "length": 692, "header": "tr|Q9LT62-1|Q9LT62_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT62-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQN0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT62/entry#A0A1I9LQN0-1", "sequence": { "sequence": "MTYELEELEGHEHLVSRVKHHDGLECDACDRLNVDGYSCSECKFNIHVACTFVFDKQEIVDHPSHDGHSLKLLTTGAPDHTDPKCHLCGNNTKRLLFHCSVCQLNLDIFCIADHLLGPEYLNMPWHPHPLLCFDFGSRNWCDFCNENYEGQGYLCYRCGLRIHEKCVVELQEITQHPSHVRHPLKLLTSGAPNYTNPRCHICGEDTGNLLYHCDICKFNLDLQCAIKSSPPVALSNMKVHEHTLTLMPKLISFVCDACGTKGDRSPYICVQCDFMTFHQKCARLPRVIHVNHHDHRVSFKYPLGPGDWRCGVCWDEIDWSYGAYSCSLCSRYAIHSLCATRDDVWDGEELDGVPEEIEDIEPFKRNDDNTIDHFSHRHNHMSLDKGGEESSFCKACAHPIGSSSSLYKCSECSFILHETCANLPMKKRHFLSPQPLTLSYHRLQRRWGVEICEACQQIFCKGFIYSSYLEENFDLPCSSITVPFIHGSHDHHLLYLKLENGNVKTCQGCGIDEKRVAIGTMIIHSLFVMVTKKQAANIGVIFVKERPIQKLGSTLVTIAGSLYMFCV", "length": 567, "header": "tr|A0A1I9LQN0-1|A0A1I9LQN0_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT62-1" }, "locus": { "chromosome": "3", "start_pos": 10182730, "end_pos": 10185149, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27500.2", "url": "https://www.ensemblgenomes.org/id/AT3G27500.2" }, { "database": "Ensembl Peptide", "id": "AT3G27500.2", "url": "https://www.ensemblgenomes.org/id/AT3G27500.2" } ] } }, { "isoform_ac": "A0A1I9LQN1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT62/entry#A0A1I9LQN1-1", "sequence": { "sequence": "MTYELEELEGHEHLVSRVKHHDGLECDACDRLNVDGYSCSECKFNIHVACTFVFDKQEIVDHPSHDGHSLKLLTTGAPDHTDPKCHLCGNNTKRLLFHCSVCQLNLDIFCIADHLLGPEYLNMPWHPHPLLCFDFGSRNWCDFCNENYEGQGYLCYRCGLRIHEKCVVELQEITQHPSHVRHPLKLLTSGAPNYTNPRCHICGEDTGNLLYHCDICKFNLDLQCAIKSSPPVALSNMKVHEHTLTLMPKLISFVCDACGTKGDRSPYICVQCDFMTFHQKCARLPRVIHVNHHDHRVSFKYPLGPGDWRCGVCWDEIDWSYGAYSCSLCSRYAIHSLCATRDDVWDGEELDGVPEEIEDIEPFKRNDDNTIDHFSHRHNHMSLDKGGEESSFCKACAHPIGSSSSLYKCSECSFILHETCANLPMKKRHFLSPQPLTLSYHRLQRRWGVEICEACQQIFCKGFIYSSYLEENFDLPCSSITVPFIHGSHDHHLLYLKLENGNVKTCQGCGIDEKRVAIGCTKCNYFLDFRCATLPLTVTLSSWRC", "length": 545, "header": "tr|A0A1I9LQN1-1|A0A1I9LQN1_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT62-1" }, "locus": { "chromosome": "3", "start_pos": 10182737, "end_pos": 10185145, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27500.3", "url": "https://www.ensemblgenomes.org/id/AT3G27500.3" }, { "database": "Ensembl Peptide", "id": "AT3G27500.3", "url": "https://www.ensemblgenomes.org/id/AT3G27500.3" } ] } }, { "isoform_ac": "Q9LT62-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT62/entry#Q9LT62-1", "sequence": { "sequence": "MTYELEELEGHEHLVSRVKHHDGLECDACDRLNVDGYSCSECKFNIHVACTFVFDKQEIVDHPSHDGHSLKLLTTGAPDHTDPKCHLCGNNTKRLLFHCSVCQLNLDIFCIADHLLGPEYLNMPWHPHPLLCFDFGSRNWCDFCNENYEGQGYLCYRCGLRIHEKCVVELQEITQHPSHVRHPLKLLTSGAPNYTNPRCHICGEDTGNLLYHCDICKFNLDLQCAIKSSPPVALSNMKVHEHTLTLMPKLISFVCDACGTKGDRSPYICVQCDFMTFHQKCARLPRVIHVNHHDHRVSFKYPLGPGDWRCGVCWDEIDWSYGAYSCSLCSRYAIHSLCATRDDVWDGEELDGVPEEIEDIEPFKRNDDNTIDHFSHRHNHMSLDKGGEESSFCKACAHPIGSSSSLYKCSECSFILHETCANLPMKKRHFLSPQPLTLSYHRLQRRWGVEICEACQQIFCKGFIYSSYLEENFDLPCSSITVPFIHGSHDHHLLYLKLENGNVKTCQGCGIDEKRVAIGCTKCNYFLDFRCATLPLTVTLSRYDDHPLTLCYGDEKASGKYWCDICERETNPKTWFYTCNDCGVTLHVLCVVGDVRYAKPKAMIEYYIELLSNNSSSRPFCHNCYCRCPGPFILRIRKQHDAHLGGEYYIFFCSYYCYIITKSKKEYSKIKLRCPPWRSGHQSQLMELQNDQ", "length": 692, "header": "tr|Q9LT62-1|Q9LT62_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT62-1" }, "locus": { "chromosome": "3", "start_pos": 10182735, "end_pos": 10185198, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27500.1", "url": "https://www.ensemblgenomes.org/id/AT3G27500.1" }, { "database": "Ensembl Peptide", "id": "AT3G27500.1", "url": "https://www.ensemblgenomes.org/id/AT3G27500.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LT62", "url": "https://www.uniprot.org/uniprotkb/Q9LT62" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LT62", "url": "https://www.uniprot.org/uniprotkb/Q9LT62" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G27500", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27500", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LT76-1", "uniprot_ac": "Q9LT76", "uniprot_id": "FBK63_ARATH", "mass": { "chemical_mass": 43396.0, "monoisotopic_mass": 43396.0 }, "refseq": { "ac": "NP_188572", "name": "F-box and associated interaction domains-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188572" }, "gene_names": [ { "name": "MLD14.14", "type": "synonym", "evidence": [ { "id": "Q9LT76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT76" } ] } ], "protein_names": [ { "name": "Putative F-box/kelch-repeat protein At3g19410", "type": "recommended", "evidence": [ { "id": "Q9LT76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT76/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_188572", "database": "RefSeq", "url": 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Classification" ] }, { "id": "821475", "url": "https://www.ncbi.nlm.nih.gov/gene/821475", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G19410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKTEIWV", "url": "https://omabrowser.org/oma/group/CKTEIWV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LT76", "url": "https://www.orthodb.org/?gene=Q9LT76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LT76", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LT76", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_188572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188572", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G19410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G19410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LT76", "url": "https://www.uniprot.org/uniprotkb/Q9LT76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT76-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTIPELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTNEELCAMSVNLHGTIPSLEVKDKPWLFVSDSKHCDIEISRIFHSGGLLLCFSRDGEISIIVWNPLTSETRLIRTRNRRDKGRNFVLGYYQEDKKTYYKILSFYLDSKDFEIFEFNSDSWRFIDDICPGLSLLYSDQCVSLKGNTYMFAIDDLSVSLLKYDFSTETSVPVPLPYKSRSFEAISLSVVREEKLSVLLQRDKSSKTEIWVTNVIDETTTKVMVVSWSKVLSLDLSPDLKIRYGESFLLDEEKKVIMIFNNRMEEENKSEDKLYIIGDDDNKATQVYTIHGYGPAVFNYFPSLVQIEQSSRQEEKS", "length": 373, "header": "sp|Q9LT76-1|FBK63_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At3g19410 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LT76-1" }, "isoforms": [ { "isoform_ac": "Q9LT76-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT76/entry#Q9LT76-1", "sequence": { "sequence": "MTIPELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTNEELCAMSVNLHGTIPSLEVKDKPWLFVSDSKHCDIEISRIFHSGGLLLCFSRDGEISIIVWNPLTSETRLIRTRNRRDKGRNFVLGYYQEDKKTYYKILSFYLDSKDFEIFEFNSDSWRFIDDICPGLSLLYSDQCVSLKGNTYMFAIDDLSVSLLKYDFSTETSVPVPLPYKSRSFEAISLSVVREEKLSVLLQRDKSSKTEIWVTNVIDETTTKVMVVSWSKVLSLDLSPDLKIRYGESFLLDEEKKVIMIFNNRMEEENKSEDKLYIIGDDDNKATQVYTIHGYGPAVFNYFPSLVQIEQSSRQEEKS", "length": 373, "header": "sp|Q9LT76-1|FBK63_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At3g19410 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LT76-1" }, "locus": { "chromosome": "3", "start_pos": 6729585, "end_pos": 6730706, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19410.1", "url": "https://www.ensemblgenomes.org/id/AT3G19410.1" }, { "database": "Ensembl Peptide", "id": "AT3G19410.1", "url": "https://www.ensemblgenomes.org/id/AT3G19410.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 236, "end_pos": 236, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT76" } ], "site_lbl": "Ser236" }, { "start_pos": 238, "end_pos": 238, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT76" } ], "site_lbl": "Ser238" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LT76", "url": "https://www.uniprot.org/uniprotkb/Q9LT76" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LT76", "url": "https://www.uniprot.org/uniprotkb/Q9LT76" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G19410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19410", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LT76", "url": "https://www.uniprot.org/uniprotkb/Q9LT76" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 324, "end_pos": 326, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LT76-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 373, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LT76-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LT76" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LT76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT76" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 46, "start_aa": "Met", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 236, 238 ], "sequon_annotation_sites": [ { "start_pos": 324, "end_pos": 326 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LT85-1", "uniprot_ac": "Q9LT85", "uniprot_id": "Q9LT85_ARATH", "mass": { "chemical_mass": 54972.0, "monoisotopic_mass": 54972.0 }, "refseq": { "ac": "NP_188563", "name": "Leucine-rich repeat (LRR) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188563" }, "gene_names": [], "protein_names": [ { "name": "Leucine-rich repeat (LRR) family protein", "type": "synonym", "evidence": [ { "id": "NP_188563", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188563" }, { "id": "Q9LT85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT85/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LT85", "locus": {} } ], "crossref": [ { "id": "821466", "url": "https://www.ncbi.nlm.nih.gov/gene/821466", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051582", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051582", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G19320", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19320", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FRCATVP", "url": "https://omabrowser.org/oma/group/FRCATVP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32093", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32093", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32093:SF161", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32093:SF161", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00560", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00560", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188563", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188563", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G19320", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G19320", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LT85-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT85-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPNYYPSIFLILSVHFLSILATGNNHNTYRKSLEIIIGGGSDSTNYNSPAPSPEPEDYLPLPPPPQTPPPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFSSPLIKKVYPVIKNFQTLIEDDPKSILKTWVGTDICAQDKYIGLECAKLPGTNDLALASIQFNNFNLGGKKLRLDNFLNKLEEVTIFHANSNNFVGSVPNFSKLKYLFELDLSNNKLSGEFPSSVLKATNLTFLDLRFNSFSGSVPPQVFNLDLDVLFINNNNLVQRLPENLGSITALYLTFANNRFTGPIPGSIGDIKSLQEVLFLNNKLTGCLPYQIGNLNRATVFDVELNQLTGPIPYSFGCLKKMEQLNLARNNFYGTIPEIVCELSALKNLSLSYNYFTQVGPKCRTLIKRKILDVGMNCILDLTNQRTPWECAKFFLRKQSCPNFKSFFYLPCGKDPHRIKPDQEGSDGQASPPVSYNALNPDRIRNL", "length": 493, "header": "tr|Q9LT85-1|Q9LT85_ARATH Isoform 1 of Leucine-rich repeat (LRR) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT85-1" }, "isoforms": [ { "isoform_ac": "Q9LT85-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT85/entry#Q9LT85-1", "sequence": { "sequence": "MAPNYYPSIFLILSVHFLSILATGNNHNTYRKSLEIIIGGGSDSTNYNSPAPSPEPEDYLPLPPPPQTPPPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFSSPLIKKVYPVIKNFQTLIEDDPKSILKTWVGTDICAQDKYIGLECAKLPGTNDLALASIQFNNFNLGGKKLRLDNFLNKLEEVTIFHANSNNFVGSVPNFSKLKYLFELDLSNNKLSGEFPSSVLKATNLTFLDLRFNSFSGSVPPQVFNLDLDVLFINNNNLVQRLPENLGSITALYLTFANNRFTGPIPGSIGDIKSLQEVLFLNNKLTGCLPYQIGNLNRATVFDVELNQLTGPIPYSFGCLKKMEQLNLARNNFYGTIPEIVCELSALKNLSLSYNYFTQVGPKCRTLIKRKILDVGMNCILDLTNQRTPWECAKFFLRKQSCPNFKSFFYLPCGKDPHRIKPDQEGSDGQASPPVSYNALNPDRIRNL", "length": 493, "header": "tr|Q9LT85-1|Q9LT85_ARATH Isoform 1 of Leucine-rich repeat (LRR) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT85-1" }, "locus": { "chromosome": "3", "start_pos": 6696301, "end_pos": 6698184, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19320.1", "url": "https://www.ensemblgenomes.org/id/AT3G19320.1" }, { "database": "Ensembl Peptide", "id": "AT3G19320.1", "url": "https://www.ensemblgenomes.org/id/AT3G19320.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 100, "start_aa": "Thr", "end_pos": 100, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr100", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 144, "end_pos": 144, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LT85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT85" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser144" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LT85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LT85" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G19320", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19320", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9LT85", "url": "https://www.uniprot.org/uniprotkb/Q9LT85" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 249, "end_pos": 251, "annotation": "n_glycosylation_sequon" }, { 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"https://www.uniprot.org/uniprotkb/Q9LT86/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LT86", "url": "https://www.uniprot.org/uniprotkb/Q9LT86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LT86", "locus": {} } ], "crossref": [ { "id": "cd08588", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08588", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821465", "url": "https://www.ncbi.nlm.nih.gov/gene/821465", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR017946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G19310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G19310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SRMQPIN", "url": "https://omabrowser.org/oma/group/SRMQPIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13593", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13593", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13593:SF85", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13593:SF85", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF26178", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26178", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188562", "url": 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"header": "tr|Q9LT86-1|Q9LT86_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT86-1" }, "isoforms": [ { "isoform_ac": "Q9LT86-1", "url": "https://www.uniprot.org/uniprotkb/Q9LT86/entry#Q9LT86-1", "sequence": { "sequence": "MFQRFTFFLTALLIPCILIILSPSYALKEGETCIVSKNCDRGLHCESCLASDSFRPRCSRMQPINPTTKVKGLPYNKYSWLTTHNSFARMGAKSGTGSMILAPSNQQDSITSQLLNGVRGFMLDLYDFQNDIWLCHSYGGNCFNYTAFQPAVNILKEFQVFLDKNKDVVVTLILEDYVKSPNGLTRVFDASGLRNFMFPVSRMPKNGEDWPTLDDMICQNQRLLVFTSNPQKEASEGIAFMWRYMIENQYGDGGMKAGVCTNRPESVAMGDRSRSLILVNYFPDTADVIGSCKQNSAPLLDTVKNCQEASGKRWPNFIAVDFYKRSDGGGAPKAVDVANGHAVCGCEDIAACKENMPYGTCEKQEEKKPESNLMMIAKLTAEATKGYGHPSTKPTLLGLSVFVVTFVSLLSTF", "length": 413, "header": "tr|Q9LT86-1|Q9LT86_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LT86-1" }, "locus": { "chromosome": "3", "start_pos": 6694114, "end_pos": 6696357, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G19310.1", "url": "https://www.ensemblgenomes.org/id/AT3G19310.1" }, { "database": "Ensembl Peptide", "id": "AT3G19310.1", "url": "https://www.ensemblgenomes.org/id/AT3G19310.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, 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"https://www.ebi.ac.uk/interpro/entry/IPR018613", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040233", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040233", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G47090", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G47090", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LDVYMRH", "url": "https://omabrowser.org/oma/group/LDVYMRH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31840", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31840", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31840:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31840:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09747", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09747", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G47090", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G47090", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTB9", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTB9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEKKKTMEMEATTMKGTAAEDITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLERYGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLVSEGQYFSEDAMRDREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIREEQQRLGVSESDWVGNEKMEESEEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKEKATTVLPPEEMQDMMDQFTSIMEQKFLSGEDHQHLDYAKIDNDETLDDHWLREIGRDAEDKYFDED", "length": 310, "header": "tr|Q9LTB9-1|Q9LTB9_ARATH Isoform 1 of Coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTB9-1" }, "isoforms": [ { "isoform_ac": "Q9LTB9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9/entry#Q9LTB9-1", "sequence": { "sequence": "MEEKKKTMEMEATTMKGTAAEDITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLERYGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLVSEGQYFSEDAMRDREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIREEQQRLGVSESDWVGNEKMEESEEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKEKATTVLPPEEMQDMMDQFTSIMEQKFLSGEDHQHLDYAKIDNDETLDDHWLREIGRDAEDKYFDED", "length": 310, "header": "tr|Q9LTB9-1|Q9LTB9_ARATH Isoform 1 of Coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTB9-1" }, "locus": { "chromosome": "5", "start_pos": 19127187, "end_pos": 19129605, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G47090.2", "url": "https://www.ensemblgenomes.org/id/AT5G47090.2" }, { "database": "Ensembl Peptide", "id": "AT5G47090.2", "url": "https://www.ensemblgenomes.org/id/AT5G47090.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 101, "end_pos": 101, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTB9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTB9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser101" }, { "start_pos": 46, "end_pos": 46, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTB9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTB9" } ], "site_lbl": "Ser46" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB9", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LTB9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTB9" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB9", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G47090", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G47090", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A4L2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "Ccdc97", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVAAAAVAERKPDDDCVEARCVHWGELSQTSIPPGPQEKETAESTPDVTSGDSSQAESPAVSAMLHAIAASHLPVCSQQQGEPDLTEPEKVAILGQLYHKKPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELSARTPAPQAPRSGSPGTPAYPLSDLLFQSYQERELQQKLLQQQEEEEACFEEEEDSDEEDQRSDKDLEAWVPDSEERLILREEFTSRMHQRFLDGKDGGFDYSTVDDNPDFDNLDIVARDEEDRYFDEEEPEDVSSPELDGD", "length": 340 }, "evidence": [ { "id": "Q9LTB9", "url": "https://omabrowser.org/oma/group/Q9LTB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7FBN4-1", "protein_name": "Coiled-coil domain-containing protein 97", "gene_name": "ccdc97", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MWGEIEPRVNGQESMKSRGTDQRRTHSPDPQQKTVLWGEIESTSKPDPPTWSQPASQDSLPALPHPPETNAREVNNTPSCSSDVQDEPPISLSAMIETIAASGSPVKSQQLGDPDLTLEEKREVLMDQYRSRPLVFLERYQAHLKPEHIDAFSHLSSDCRVQYYCKEIQRRASGSADRRRVRNHRYAALRALQKDGQYFSEEQMRVRDPLLYEQYIGQYLSEEEILQRSEEVMRSGTGGLADLLIDSYQEKLIQSRLEQEQEKEQCALEESEDEECEEVRQAEYEPNAEEKAMLREEFLSQMHQRFLDGKDDFNYSEVDENPDYDNLDIVSRDAEERYFDEDEEEEEEEEEEEEEQEEMTH", "length": 361 }, "evidence": [ { "id": "Q9LTB9", "url": "https://omabrowser.org/oma/group/Q9LTB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q96F63-1", "protein_name": "Coiled-coil domain-containing protein 97", "gene_name": "CCDC97", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEAVATATAAKEPDKGCIEPGPGHWGELSRTPVPSKPQDKVEAAEATPVALDSDTSGAENAAVSAMLHAVAASRLPVCSQQQGEPDLTEHEKVAILAQLYHEKPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELSARTPTHQPPKPGSPGRPACPLSNLLLQSYEERELQQRLLQQQEEEEACLEEEEEEEDSDEEDQRSGKDSEAWVPDSEERLILREEFTSRMHQRFLDGKDGDFDYSTVDDNPDFDNLDIVARDEEERYFDEEEPEDAPSPELDGD", "length": 343 }, "evidence": [ { "id": "Q9LTB9", "url": "https://omabrowser.org/oma/group/Q9LTB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9DBT3-1", "protein_name": "Coiled-coil domain-containing protein 97", "gene_name": "Ccdc97", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEAVAAAEVTERKPDNDGVEPRVVHWGELSQTPIPSGPQEKETAERTPDIPNSGSSQAESPAVSAMLHAIAASHLPVCSQQQGEPDLTEPEKVAILGQLYHKKPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELNARTAAPQAPRSGSPGTPAYPLSDLLFQSYQERELQQKLLQQQEEEEACFEEEEDSDEEDQRSDKDSEAWVPDSEERLILREEFTSRMHQRFLDGKDGGFDYSTVDDNPDFDNLDIVARDEEDRYFDEEEPEDVSSAELGGD", "length": 340 }, "evidence": [ { "id": "Q9LTB9", "url": "https://omabrowser.org/oma/group/Q9LTB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VLP6-1", "protein_name": "CCD97-like C-terminal domain-containing protein", "gene_name": "Dmel\\CG7810", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTTGSDADGDGDHQGNNDIVPNPEHPPEIIDIFKSLAENNQIVFKSQQIDDPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLGSFQELAVKEPIKADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHEMMQRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELLEETQQEGKQSVQVTSESNPQADCDVPVACRKQWGGFEDDEPVACSTSRNAEVRAPMNTTMISTPEFYNPGERELLRNEFLSMMKERFLSGEDKDFDYKAVDDNTLLDDLKQIEQDEEDAYFEDSEDEEELEEHAADENAISSEDDLDIYMRHLSNHHSLQNSHG", "length": 364 }, "evidence": [ { "id": "Q9LTB9", "url": "https://omabrowser.org/oma/group/Q9LTB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTB9" }, { "id": "PF09747", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09747" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCD97-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 116, "end_pos": 310, "start_aa": "Asn", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 46, 101 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTC3-1", "uniprot_ac": "Q9LTC3", "uniprot_id": "FB179_ARATH", "mass": { "chemical_mass": 41908.0, "monoisotopic_mass": 41908.0 }, "refseq": { "ac": "NP_188967", "name": "F-box and associated interaction domains-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188967" }, "gene_names": [ { "name": "K14B15.17", "type": "synonym", "evidence": [ { "id": "Q9LTC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC3" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g23260", "type": "recommended", "evidence": [ { "id": "Q9LTC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC3/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_188967", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188967" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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"database": "Ensembl Peptide", "id": "AT3G23260.1", "url": "https://www.ensemblgenomes.org/id/AT3G23260.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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"https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23260", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LTC3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 362, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LTC3-F1.pdb", "url_external": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTC9-1", "uniprot_ac": "Q9LTC9", "uniprot_id": "Q9LTC9_ARATH", "mass": { "chemical_mass": 24496.0, "monoisotopic_mass": 24496.0 }, "refseq": { "ac": "NP_188960", "name": "HR-like lesion-inducing protein-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188960" }, "gene_names": [], "protein_names": [ { "name": "HR-like lesion-inducing protein-like protein", "type": "synonym", "evidence": [ { "id": "NP_188960", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188960" }, { "id": "Q9LTC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTC9", "url": 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"MEKTQESVVRYGKKIEKMPYLMPAGRVVFASAFLVSAWREYYGFGLAADELRPKLGFFENQAKAIVALGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFVEETTSADGGVAMSLYTSVVNEESRQKFIDQLNEIARIAISNPLFTPSDFNTLFIRFIKGVGIAAALACFIAMKHRHAVLIEKTSKKQKTN", "length": 216, "header": "tr|Q9LTC9-1|Q9LTC9_ARATH Isoform 1 of HR-like lesion-inducing protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTC9-1" }, "isoforms": [ { "isoform_ac": "Q9LTC9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTC9/entry#Q9LTC9-1", "sequence": { "sequence": "MEKTQESVVRYGKKIEKMPYLMPAGRVVFASAFLVSAWREYYGFGLAADELRPKLGFFENQAKAIVALGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFVEETTSADGGVAMSLYTSVVNEESRQKFIDQLNEIARIAISNPLFTPSDFNTLFIRFIKGVGIAAALACFIAMKHRHAVLIEKTSKKQKTN", "length": 216, "header": "tr|Q9LTC9-1|Q9LTC9_ARATH Isoform 1 of HR-like lesion-inducing protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTC9-1" }, "locus": { "chromosome": "3", "start_pos": 8279271, "end_pos": 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A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTD0-1", "uniprot_ac": "Q9LTD0", "uniprot_id": "Q9LTD0_ARATH", "mass": { "chemical_mass": 25219.0, "monoisotopic_mass": 25219.0 }, "refseq": { "ac": "NP_001319623", "name": "HR-like lesion-inducing protein-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319623" }, "gene_names": [], "protein_names": [ { "name": "HR-like lesion-inducing protein-like protein", "type": "synonym", "evidence": [ { "id": "NP_001319623", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319623" }, { "id": "Q9LTD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDVVQRKVKKIGRKVASFPHVETIGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKFGYSGDQIKHLMTVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLLYLKLKRILNETVSYNTAYNLYKSDFDEQQIEQVKSKFRELADHAMTNPALFGHNEFLRRLLSFVKGLAVVGALLFFVDMKYRLNKAKKQSKVKND", "length": 217, "header": "tr|Q9LTD0-1|Q9LTD0_ARATH Isoform 1 of HR-like lesion-inducing protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTD0-1" }, "isoforms": [ { "isoform_ac": "Q9LTD0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0/entry#Q9LTD0-1", "sequence": { "sequence": "MDVVQRKVKKIGRKVASFPHVETIGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKFGYSGDQIKHLMTVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLLYLKLKRILNETVSYNTAYNLYKSDFDEQQIEQVKSKFRELADHAMTNPALFGHNEFLRRLLSFVKGLAVVGALLFFVDMKYRLNKAKKQSKVKND", "length": 217, "header": "tr|Q9LTD0-1|Q9LTD0_ARATH Isoform 1 of HR-like lesion-inducing protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTD0-1" }, "locus": { "chromosome": "3", "start_pos": 8276922, "end_pos": 8278535, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23180.2", "url": "https://www.ensemblgenomes.org/id/AT3G23180.2" }, { "database": "Ensembl Peptide", "id": "AT3G23180.2", "url": "https://www.ensemblgenomes.org/id/AT3G23180.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 62, "end_pos": 62, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTD0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTD0" } ], "site_lbl": "Ser62" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTD0", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTD0", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G23180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23180", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LTD0", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9LTD0", "url": "https://www.uniprot.org/uniprotkb/Q9LTD0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 131, "end_pos": 133, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 62 ], "sequon_annotation_sites": [ { "start_pos": 131, "end_pos": 133 }, { "start_pos": 49, "end_pos": 51 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVSEAWIVKMRNQVSSNLKHALLLESSSTKKTPKPVSLPKQTIGILSFEVANVMSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKLDDLSRVASVVSRLGKKCNEPALQGFEHVYEDIVNGAIDFRKLGFLVKDMESMVKKMERFVNATCSLYCEMEVMNELEQAIVKLQRSQQHQESVKAFEQKLMWQRQDVKSLRDGSLWNQTYDKVVEMLARTVCTIYGRIETVFGGLGLRGKKDVTLKRDRSKNEASKAVNSRSVAGFKDSRRSEADEFTRAGDFNFPCGTNPGRMFMECLAMNRTIGDDDDDDDEDGGRITFPLSTARMIRSNKFGFKSRLTQHASASTIGGSALSLHYANVVIVVEKLLKYPHLIGEEARDDLYQMLPTSLKTTLKASLRSYLKNISIYDAPLAHDWKETIDGILSWLAPLAHNMIRWQSERNFEQQNQIVKRTNVLLLQTLYFADREKTEAAICKLLVGLNYICHYEQQQNALLDCASSFDYEDCFEWQSQCRAAYLD", "length": 531, "header": "tr|Q9LTD4-1|Q9LTD4_ARATH Isoform 1 of Plant/protein (DUF668) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTD4-1" }, "isoforms": [ { "isoform_ac": "Q9LTD4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTD4/entry#Q9LTD4-1", "sequence": { "sequence": "MVSEAWIVKMRNQVSSNLKHALLLESSSTKKTPKPVSLPKQTIGILSFEVANVMSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKLDDLSRVASVVSRLGKKCNEPALQGFEHVYEDIVNGAIDFRKLGFLVKDMESMVKKMERFVNATCSLYCEMEVMNELEQAIVKLQRSQQHQESVKAFEQKLMWQRQDVKSLRDGSLWNQTYDKVVEMLARTVCTIYGRIETVFGGLGLRGKKDVTLKRDRSKNEASKAVNSRSVAGFKDSRRSEADEFTRAGDFNFPCGTNPGRMFMECLAMNRTIGDDDDDDDEDGGRITFPLSTARMIRSNKFGFKSRLTQHASASTIGGSALSLHYANVVIVVEKLLKYPHLIGEEARDDLYQMLPTSLKTTLKASLRSYLKNISIYDAPLAHDWKETIDGILSWLAPLAHNMIRWQSERNFEQQNQIVKRTNVLLLQTLYFADREKTEAAICKLLVGLNYICHYEQQQNALLDCASSFDYEDCFEWQSQCRAAYLD", "length": 531, "header": "tr|Q9LTD4-1|Q9LTD4_ARATH Isoform 1 of Plant/protein (DUF668) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTD4-1" }, "locus": { "chromosome": "3", "start_pos": 8259774, "end_pos": 8262089, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23160.1", "url": "https://www.ensemblgenomes.org/id/AT3G23160.1" }, { "database": "Ensembl Peptide", "id": "AT3G23160.1", "url": "https://www.ensemblgenomes.org/id/AT3G23160.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, 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], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTD7", "locus": {} } ], "crossref": [ { "id": "835241", "url": "https://www.ncbi.nlm.nih.gov/gene/835241", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007700", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007700", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021864", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021864", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G51670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G51670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HKMDKQV", "url": "https://omabrowser.org/oma/group/HKMDKQV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LTD7", "url": 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"sequence": { "sequence": "MALETFLIKLKNAISSKPTSRRPHRSSPPISTTTSSVGVLSFEVARVMTKLLHLTHSLTDSNLLTPRDHSLSLEGLTKIVNGDETFHLSLVCAELADSLAHAANSVSRLSNRCTTASLRSFHRLFHEFADMGRDPHGWVMNCKDTEAKNKKIERYVSVTTALYREMEEMAILENSLRKQSLQIGIEFEEEEDYENKKDVMKVIDLQNKIERQKQHVKYLKDRSLWNKSFDTVVLILARSVFTALARLKSVFSSAAATGYMVPTVVSSLPRSLSSSSSSMNLVHPSPNDEERDKTTTSSAFLEESSRLLKPPETTLGGAGVALHYANLIVVMEKMIKQPQLVGLDARDDLYSMLPASVRSSLRSRLKGVGFTATDGGLATEWKAALGRILRWLLPLAQNMIRWQSERSFEQQHMATATNSQNRVMLVQTLVFADKVKTEAAITELLVGLNYIWRFEREMTAKALFNLQCPPTNYS", "length": 474, "header": "tr|Q9LTD7-1|Q9LTD7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTD7-1" }, "locus": { "chromosome": "5", "start_pos": 20993493, "end_pos": 20995644, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G51670.2", "url": "https://www.ensemblgenomes.org/id/AT5G51670.2" }, { "database": "Ensembl Peptide", "id": "AT5G51670.2", "url": "https://www.ensemblgenomes.org/id/AT5G51670.2" } ] } } ], 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Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTE9", "url": "https://www.uniprot.org/uniprotkb/Q9LTE9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTE9", "url": "https://www.uniprot.org/uniprotkb/Q9LTE9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": 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of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTF6", "url": "https://www.uniprot.org/uniprotkb/Q9LTF6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G52610", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G52610", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "Q9LTF6", "url": "https://www.uniprot.org/uniprotkb/Q9LTF6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 85, "end_pos": 87, "annotation": "n_glycosylation_sequon" }, { "start_pos": 86, "end_pos": 88, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LTF6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 351, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LTF6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LTF6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 85, "end_pos": 87 }, { "start_pos": 86, "end_pos": 88 } ] }, "class_list": [], "section_stats": [ 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTG3-1", "uniprot_ac": "Q9LTG3", "uniprot_id": "Q9LTG3_ARATH", "mass": { "chemical_mass": 47645.0, "monoisotopic_mass": 47645.0 }, "refseq": {}, "gene_names": [ { "name": "F6N7.1", "type": "synonym", "evidence": [ { "id": "Q9LTG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ] }, { "name": "F6N7_1", "type": "synonym", "evidence": [ { "id": "Q9LTG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ] } ], "protein_names": [ { "name": "Keratin-associated protein, putative (DUF819)", "type": "synonym", "evidence": [ { "id": "Q9LTG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34289:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34289:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05684", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05684", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G52540", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G52540", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTG3", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTG3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSLPLLNVIGNSLPSSSRLFRRRSYIVSRQDLPEFSAKSTSSRLSFSPASLSQFRNGTDRFLSPESSSPIRSVTVSSLSTPLISPNDEWGTWTALFATGALGLWSEKTKVGAAMSGALVSTLVGLAASNLGIISSQAPAFAVVLNFLLPLAVPLLLFRADLRRVVQSTGKLLLAFLIGSVATTVGTALAYYLVPMKSLGPDSWKIAAALMGRHIGGAVNYVAISNALGVTPSVLAAGLAADNVICAVYFTTLFALGSKIPAEAVPPPTTIVDAETNEASETKNKIPVLLIATGIAVSLAICKAGALLTKYFGISGGSLPAITAVVVILATVFPSQFGRLAPSGEAMALILMQVFFTVVGASGNIWSVINTAPSIFLFALVQIGTHLAVILGIGKLLNIELRLLLLASNANVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAIATFIGIAFGVKVLKFM", "length": 461, "header": "tr|Q9LTG3-1|Q9LTG3_ARATH Isoform 1 of Keratin-associated protein, putative (DUF819) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTG3-1" }, "isoforms": [ { "isoform_ac": "Q9LTG3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3/entry#Q9LTG3-1", "sequence": { "sequence": "MATSLPLLNVIGNSLPSSSRLFRRRSYIVSRQDLPEFSAKSTSSRLSFSPASLSQFRNGTDRFLSPESSSPIRSVTVSSLSTPLISPNDEWGTWTALFATGALGLWSEKTKVGAAMSGALVSTLVGLAASNLGIISSQAPAFAVVLNFLLPLAVPLLLFRADLRRVVQSTGKLLLAFLIGSVATTVGTALAYYLVPMKSLGPDSWKIAAALMGRHIGGAVNYVAISNALGVTPSVLAAGLAADNVICAVYFTTLFALGSKIPAEAVPPPTTIVDAETNEASETKNKIPVLLIATGIAVSLAICKAGALLTKYFGISGGSLPAITAVVVILATVFPSQFGRLAPSGEAMALILMQVFFTVVGASGNIWSVINTAPSIFLFALVQIGTHLAVILGIGKLLNIELRLLLLASNANVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAIATFIGIAFGVKVLKFM", "length": 461, "header": "tr|Q9LTG3-1|Q9LTG3_ARATH Isoform 1 of Keratin-associated protein, putative (DUF819) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTG3-1" }, "locus": { "chromosome": "5", "start_pos": 21321428, "end_pos": 21323780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G52540.1", "url": "https://www.ensemblgenomes.org/id/AT5G52540.1" }, { "database": "Ensembl Peptide", "id": "AT5G52540.1", "url": "https://www.ensemblgenomes.org/id/AT5G52540.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 417, "start_aa": "Thr", "end_pos": 417, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr417", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 409, "end_pos": 409, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTG3" } ], "site_lbl": "Ser409" }, { "start_pos": 417, "end_pos": 417, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTG3" } ], "site_lbl": "Thr417" }, { "start_pos": 418, "end_pos": 418, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTG3" } ], "site_lbl": "Thr418" }, { "start_pos": 424, "end_pos": 424, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTG3" } ], "site_lbl": "Thr424" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTG3", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTG3", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G52540", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G52540", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LTG3", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "Q9LTG3", "url": "https://www.uniprot.org/uniprotkb/Q9LTG3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 58, "end_pos": 60, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LTJ0" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { 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L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { 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"MDPEAKLILLILRFNALKSYINSDPEEVMSVISQIISLVKSMVTETETELMSLISETIDFFKEMDLESQPNSLRKLISLISRTHFVNSSDWEEPVPESTLMSLIKETWSMKPQPELISLIQKIISLVDNSPELKLKSFITQLIFLDDNLSERLNWNYSRRFLSLSRYIISLATSVDWNLQPKPESELMSLTNQSISVFNSMDVDSQPEPLRNLISLISLASFRSSPTNLRYSKPNMVDILNLFKDKTVEFETGSLTKRVVWKSLNKKLFLLVTETLSLDPEPKLISLIHRIFSHVLSMNSKWKNLISLCPQVQVILKKGKFHVIEQGLWTRNQKWDDPVSDDDSTEARVVSWRKNKWDCLPFNWDKFMLTEEKDDTHFVCRGCYGENHEDNSKAPVEIKHPLHPKHSLQLALFNDDKTRQCYCCHELLRDDTASMFYFCSPCDFGLKFTCAKKSPVLSIDQPKWHEHTLALFPSQDPQTCSLCALKHSNLVFYICPPCDFIIHQSCFSLPHVIRISRHLHCISFTHSFRKGDWICGVCRRKINNDYGGYHCIKKGCLYAVHSKCATQPNVWDGIEREGESEEEVEELEPFLTISDGIIQHFSHEHHHLTLDENNGKDYDENKLCQACIMPIYFGNSYSCLQCDFILHEECANLSRRLHHPIHPHLLTLISDNPLRDVGSWNNSDRDYCSACPSLCISGFFYKCSKIDCDFRLHVQCATISEPLLHPSHMHHLFLTSKPNEERNCSVCAKAPGEYTKETFNCIEEECDYALCFKCATLPQQVRYKHDKHILPLSYGKKTSDMTYWCEACEGKINPEEGFYRCDEYCCVHLHITCLLGKDLYLKPRSSWSLSCGALLILPNYLWMSRPICSSCGNRCPQRIFLFLLSGASFFCSVYCIPTTRELGFFPGLEAGELALILSSFRS", "length": 922, "header": "tr|Q9LTL7-1|Q9LTL7_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTL7-1" }, "isoforms": [ { "isoform_ac": "Q9LTL7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTL7/entry#Q9LTL7-1", "sequence": { "sequence": "MDPEAKLILLILRFNALKSYINSDPEEVMSVISQIISLVKSMVTETETELMSLISETIDFFKEMDLESQPNSLRKLISLISRTHFVNSSDWEEPVPESTLMSLIKETWSMKPQPELISLIQKIISLVDNSPELKLKSFITQLIFLDDNLSERLNWNYSRRFLSLSRYIISLATSVDWNLQPKPESELMSLTNQSISVFNSMDVDSQPEPLRNLISLISLASFRSSPTNLRYSKPNMVDILNLFKDKTVEFETGSLTKRVVWKSLNKKLFLLVTETLSLDPEPKLISLIHRIFSHVLSMNSKWKNLISLCPQVQVILKKGKFHVIEQGLWTRNQKWDDPVSDDDSTEARVVSWRKNKWDCLPFNWDKFMLTEEKDDTHFVCRGCYGENHEDNSKAPVEIKHPLHPKHSLQLALFNDDKTRQCYCCHELLRDDTASMFYFCSPCDFGLKFTCAKKSPVLSIDQPKWHEHTLALFPSQDPQTCSLCALKHSNLVFYICPPCDFIIHQSCFSLPHVIRISRHLHCISFTHSFRKGDWICGVCRRKINNDYGGYHCIKKGCLYAVHSKCATQPNVWDGIEREGESEEEVEELEPFLTISDGIIQHFSHEHHHLTLDENNGKDYDENKLCQACIMPIYFGNSYSCLQCDFILHEECANLSRRLHHPIHPHLLTLISDNPLRDVGSWNNSDRDYCSACPSLCISGFFYKCSKIDCDFRLHVQCATISEPLLHPSHMHHLFLTSKPNEERNCSVCAKAPGEYTKETFNCIEEECDYALCFKCATLPQQVRYKHDKHILPLSYGKKTSDMTYWCEACEGKINPEEGFYRCDEYCCVHLHITCLLGKDLYLKPRSSWSLSCGALLILPNYLWMSRPICSSCGNRCPQRIFLFLLSGASFFCSVYCIPTTRELGFFPGLEAGELALILSSFRS", "length": 922, "header": "tr|Q9LTL7-1|Q9LTL7_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTL7-1" }, "locus": { "chromosome": "3", "start_pos": 9603889, "end_pos": 9607193, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26240.1", "url": "https://www.ensemblgenomes.org/id/AT3G26240.1" }, { "database": "Ensembl Peptide", "id": "AT3G26240.1", "url": "https://www.ensemblgenomes.org/id/AT3G26240.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 102, "end_pos": 102, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser102" }, { "start_pos": 232, "end_pos": 232, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser232" }, { "start_pos": 340, "end_pos": 340, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser340" }, { "start_pos": 83, "end_pos": 83, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Thr83" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTL7", "url": "https://www.uniprot.org/uniprotkb/Q9LTL7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LTL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTL7" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTL7", "url": "https://www.uniprot.org/uniprotkb/Q9LTL7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G26240", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26240", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 148, "end_pos": 150, "annotation": "n_glycosylation_sequon" }, { "start_pos": 156, "end_pos": 158, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 652, "end_pos": 654, "annotation": "n_glycosylation_sequon" }, { "start_pos": 681, "end_pos": 683, "annotation": "n_glycosylation_sequon" }, { "start_pos": 743, "end_pos": 745, "annotation": "n_glycosylation_sequon" }, { "start_pos": 87, "end_pos": 89, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTL7" }, { "id": "PF03107", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DC1", "eco_id": "ECO_0000259", "start_pos": 401, "end_pos": 451, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9LTL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTL7" }, { "id": "PF22926", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DC1-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 856, "end_pos": 896, "start_aa": "Ile", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 83, 102, 232, 340 ], "sequon_annotation_sites": [ { "start_pos": 148, "end_pos": 150 }, { "start_pos": 156, "end_pos": 158 }, { "start_pos": 192, "end_pos": 194 }, { "start_pos": 652, "end_pos": 654 }, { "start_pos": 681, "end_pos": 683 }, { "start_pos": 743, "end_pos": 745 }, { "start_pos": 87, "end_pos": 89 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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{ "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTN0-1", "uniprot_ac": "Q9LTN0", "uniprot_id": "Q9LTN0_ARATH", "mass": { "chemical_mass": 64315.0, "monoisotopic_mass": 64315.0 }, "refseq": { "ac": "NP_001327393", "name": "Cellulase (glycosyl hydrolase family 5) protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327393" }, "gene_names": [], "protein_names": [ { "name": "Cellulase (Glycosyl hydrolase family 5) protein", "type": "synonym", "evidence": [ { "id": "Q9LTN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0/entry#names_and_taxonomy" } ] }, { "name": "Cellulase (glycosyl hydrolase family 5) protein", "type": "synonym", "evidence": [ { "id": "NP_001327393", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327393" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0", "locus": {} } ], "crossref": [ { "id": "AT3G26130", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G26130", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822213", "url": "https://www.ncbi.nlm.nih.gov/gene/822213", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001547", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001547", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G26130", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26130", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TYVTPLY", "url": "https://omabrowser.org/oma/group/TYVTPLY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31263", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31263", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31263:SF45", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31263:SF45", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00150", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00150", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001327393", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327393", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G26130", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26130", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LS67", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS67", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LS67-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS67-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JBE4", "url": "https://www.uniprot.org/uniprotkb/F4JBE4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JBE4-1", "url": "https://www.uniprot.org/uniprotkb/F4JBE4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTN0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKQREINQMEKFFFISVFLLPYVITTFAFPPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNPTILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMSLRNELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIVSGLNYATDLSFLRERPFEVSFRRKVVFEIHWYGFWNTWEGDNLNKICGKETEKMMKMSGFLLEKGIPLFVSEFGIDQRGNNANDNKFLSCFMALAADRDLDWSLWTLAGSYYIREKSIGSDESYGVLDFNWSSIRNSTILQMISAIQTPFIGPGLMETQPKKIMFHPSTGLCIVRKSLFQLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRLFFSESYCSKWKLFSDSKMQLSSITKNGFSVCLDVDTENNNIVTNSCKCLRGNSSCDPRSQWFKLVTSTRRRSRPKPFLQISLYSKTFLQKSLSV", "length": 561, "header": "tr|Q9LTN0-1|Q9LTN0_ARATH Isoform 1 of Cellulase (Glycosyl hydrolase family 5) protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LTN0-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LS67-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0/entry#A0A1I9LS67-1", "sequence": { "sequence": "MEKFFFISVFLLPYVITTFAFPPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNPTILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMSLRNELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIVSGLNYATDLSFLRERPFEVSFRRKVVFEIHWYGFWNTWEGDNLNKICGKETEKMMKMSGFLLEKGIPLFVSEFGIDQRGNNANDNKFLSCFMALAADRDLDWSLWTLAGSYYIREKSIGSDESYGVLDFNWSSIRNSTILQMISAIQTPFIGPGLMETQPKKIMFHPSTGLCIVRKSLFQLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRLFFSESYCSKWKLFSDSKMQLSSITKNGFSVCLDVDTENNNIVTNSCKCLRGNSSCDPRSQWFKLVTSTRRRSRPKPFLQISLYSKTFLQKSLSV", "length": 553, "header": "tr|A0A1I9LS67-1|A0A1I9LS67_ARATH Computationally mapped isoform of Cellulase (Glycosyl hydrolase family 5) protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LTN0-1" }, "locus": { "chromosome": "3", "start_pos": 9553497, "end_pos": 9555611, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26130.3", "url": "https://www.ensemblgenomes.org/id/AT3G26130.3" }, { "database": "Ensembl Peptide", "id": "AT3G26130.3", "url": "https://www.ensemblgenomes.org/id/AT3G26130.3" } ] } }, { "isoform_ac": "F4JBE4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0/entry#F4JBE4-1", "sequence": { "sequence": "MEKFFFISVFLLPYVITTFAFPPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNPTILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMSLRNELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIVSGLNYATDLSFLRERPFEVSFRRKVVFEIHWYGFWNTWEGDNLNKICGKETEKMMKMSGFLLEKGIPLFVSEFGIDQRGNNANDNKFLSCFMALAADRDLDWSLWTLAGSYYIREKSIGSDESYGVLDFNWSSIRNSTILQMISAIQTPFIGLMETQPKKIMFHPSTGLCIVRKSLFQLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRLFFSESYCSKWKLFSDSKMQLSSITKNGFSVCLDVDTENNNIVTNSCKCLRGNSSCDPRSQWFKLVTSTRRRSRPKPFLQISLYSKTFLQKSLSV", "length": 551, "header": "tr|F4JBE4-1|F4JBE4_ARATH Computationally mapped isoform of Cellulase (Glycosyl hydrolase family 5) protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LTN0-1" }, "locus": { "chromosome": "3", "start_pos": 9553708, "end_pos": 9555611, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26130.1", "url": "https://www.ensemblgenomes.org/id/AT3G26130.1" }, { "database": "Ensembl Peptide", "id": "AT3G26130.1", "url": "https://www.ensemblgenomes.org/id/AT3G26130.1" } ] } }, { "isoform_ac": "Q9LTN0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0/entry#Q9LTN0-1", "sequence": { "sequence": "MKQREINQMEKFFFISVFLLPYVITTFAFPPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPLDAIAEKIVSMGFNCVRLTWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNPTILDLPLIKAFQEVVYCLEKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMSLRNELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIVSGLNYATDLSFLRERPFEVSFRRKVVFEIHWYGFWNTWEGDNLNKICGKETEKMMKMSGFLLEKGIPLFVSEFGIDQRGNNANDNKFLSCFMALAADRDLDWSLWTLAGSYYIREKSIGSDESYGVLDFNWSSIRNSTILQMISAIQTPFIGPGLMETQPKKIMFHPSTGLCIVRKSLFQLKLGSCNRSESWRLSSHRVLSLAEEQILCLKAYEKGKSVKLRLFFSESYCSKWKLFSDSKMQLSSITKNGFSVCLDVDTENNNIVTNSCKCLRGNSSCDPRSQWFKLVTSTRRRSRPKPFLQISLYSKTFLQKSLSV", "length": 561, "header": "tr|Q9LTN0-1|Q9LTN0_ARATH Isoform 1 of Cellulase (Glycosyl hydrolase family 5) protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LTN0-1" }, "locus": { "chromosome": "3", "start_pos": 9551789, "end_pos": 9555667, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26130.2", "url": "https://www.ensemblgenomes.org/id/AT3G26130.2" }, { "database": "Ensembl Peptide", "id": "AT3G26130.2", "url": "https://www.ensemblgenomes.org/id/AT3G26130.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 302, "end_pos": 302, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTN0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTN0" } ], "site_lbl": "Ser302" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G26130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity, hydrolyzing O-glycosyl compounds", "id": "GO:0004553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004553", "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "polysaccharide catabolic process", "id": "GO:0000272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000272", "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LTN0", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 198, "end_pos": 200, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" }, { "start_pos": 380, "end_pos": 382, "annotation": "n_glycosylation_sequon" }, { "start_pos": 431, "end_pos": 433, "annotation": "n_glycosylation_sequon" }, { "start_pos": 519, "end_pos": 521, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTN0" }, { "id": "PF00150", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00150" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycoside hydrolase family 5", "eco_id": "ECO_0000259", "start_pos": 71, "end_pos": 351, "start_aa": "Pro", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 302 ], "sequon_annotation_sites": [ { "start_pos": 198, "end_pos": 200 }, { "start_pos": 374, "end_pos": 376 }, { "start_pos": 380, "end_pos": 382 }, { "start_pos": 431, "end_pos": 433 }, { "start_pos": 519, "end_pos": 521 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTQ1-1", "uniprot_ac": "Q9LTQ1", "uniprot_id": "Q9LTQ1_ARATH", "mass": { "chemical_mass": 11742.0, "monoisotopic_mass": 11742.0 }, "refseq": { "ac": "NP_188675", "name": "F-box associated ubiquitination effector family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188675" }, "gene_names": [ { "name": "EMB2743", "type": "recommended", "evidence": [ { "id": "Q9LTQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1" } ] }, { "name": "EMB2743", "type": "synonym", "evidence": [ { "id": "NP_188675", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188675" } ] }, { "name": "EMBRYO DEFECTIVE 2743", "type": "synonym", "evidence": [ { "id": "NP_188675", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188675" }, { "id": "Q9LTQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1" } ] } ], "protein_names": [ { "name": "F-box associated ubiquitination effector family protein", "type": "synonym", "evidence": [ { "id": "NP_188675", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188675" }, { "id": "Q9LTQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "EMB2743", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1", "locus": { "chromosome": "CP002686.1", "start_pos": 7114766, "end_pos": 7114347, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT3G20400", "url": "https://www.ensemblgenomes.org/id/AT3G20400" } ] } } ], "crossref": [ { "id": "821585", "url": "https://www.ncbi.nlm.nih.gov/gene/821585", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G20400", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G20400", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WSHSHAI", "url": "https://omabrowser.org/oma/group/WSHSHAI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LTQ1", "url": "https://www.orthodb.org/?gene=Q9LTQ1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188675", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188675", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G20400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G20400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEIWVTTKIEPNMLSWGSKVFLSVDMTPLTGNDFMFSFMATSFFIDEEKKIAVVFNQSKDRKHNTAFIIGQDGSLKEVDLGEVRNRDLKPLVSSYVPSSMQLE", "length": 103, "header": "tr|Q9LTQ1-1|Q9LTQ1_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN=EMB2743 PE=4 SV=1 CANONICAL=Q9LTQ1-1" }, "isoforms": [ { "isoform_ac": "Q9LTQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ1/entry#Q9LTQ1-1", "sequence": { "sequence": "MEIWVTTKIEPNMLSWGSKVFLSVDMTPLTGNDFMFSFMATSFFIDEEKKIAVVFNQSKDRKHNTAFIIGQDGSLKEVDLGEVRNRDLKPLVSSYVPSSMQLE", "length": 103, "header": "tr|Q9LTQ1-1|Q9LTQ1_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN=EMB2743 PE=4 SV=1 CANONICAL=Q9LTQ1-1" }, "locus": { "chromosome": "3", "start_pos": 7114347, "end_pos": 7114766, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G20400.1", "url": "https://www.ensemblgenomes.org/id/AT3G20400.1" }, { "database": "Ensembl Peptide", "id": "AT3G20400.1", "url": "https://www.ensemblgenomes.org/id/AT3G20400.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach 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Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTQ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, 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Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTQ5", "url": "https://www.uniprot.org/uniprotkb/Q9LTQ5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LTQ5", "url": 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L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, 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Cell. Proteomics", "date": "2007", "authors": "Maor Rudy, Jones Alex, N\u00fchse Thomas S, Studholme David J, Peck Scott C, Shirasu Ken", "evidence": [ { "database": "UniProtKB", "id": "Q9LTS1", "url": "https://www.uniprot.org/uniprotkb/Q9LTS1" } ], "reference": [ { "type": "PubMed", "id": "17272265", "url": "https://glygen.org/publication/PubMed/17272265" } ] }, { "title": "Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer.", "journal": "Proteomics", "date": "2009-03", "authors": "Li Hao, Wong Wai Shing, Zhu Lin, Guo Hong Wei, Ecker Joseph, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9LTS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTS1" } ], "reference": [ { "type": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LTS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTS1" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LTS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTS1" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.", "journal": "Mol. 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"PTHR31228", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31228", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31228:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31228:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_200501", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200501", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G56910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G56910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTS9", "url": "https://www.uniprot.org/uniprotkb/Q9LTS9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTS9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTS9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADSVLKEVNCGRPEKIPKLDKACEGSKSSWKHLKLGNVEDDEYLRQYCLFHYEFHKSEGFTVDWEKYDYMFHIRPLENSPPISDIRTNADVIRDVTLFAIEKHNEAHGSKLVFVEHVSANFKFANGLLCWLTFWATDMASSAPTSQIYQVELWRRGKQFEIPIFRVKPKDEEMDDVEVKPPSPMPYDDYDKPPVVFVRAAPEDGVPFVFDRTGALYDLYRSGL", "length": 224, "header": "tr|Q9LTS9-1|Q9LTS9_ARATH Isoform 1 of Proteinase inhibitor I25, cystatin, conserved region OS=Arabidopsis thaliana OX=3702 GN=MHM17.2 PE=1 SV=1 CANONICAL=Q9LTS9-1" }, "isoforms": [ { "isoform_ac": "Q9LTS9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTS9/entry#Q9LTS9-1", "sequence": { "sequence": "MADSVLKEVNCGRPEKIPKLDKACEGSKSSWKHLKLGNVEDDEYLRQYCLFHYEFHKSEGFTVDWEKYDYMFHIRPLENSPPISDIRTNADVIRDVTLFAIEKHNEAHGSKLVFVEHVSANFKFANGLLCWLTFWATDMASSAPTSQIYQVELWRRGKQFEIPIFRVKPKDEEMDDVEVKPPSPMPYDDYDKPPVVFVRAAPEDGVPFVFDRTGALYDLYRSGL", "length": 224, "header": "tr|Q9LTS9-1|Q9LTS9_ARATH Isoform 1 of Proteinase inhibitor I25, cystatin, conserved region OS=Arabidopsis thaliana OX=3702 GN=MHM17.2 PE=1 SV=1 CANONICAL=Q9LTS9-1" }, "locus": { "chromosome": "5", "start_pos": 23022862, "end_pos": 23024257, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G56910.1", "url": "https://www.ensemblgenomes.org/id/AT5G56910.1" }, { "database": "Ensembl Peptide", "id": "AT5G56910.1", "url": "https://www.ensemblgenomes.org/id/AT5G56910.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 183, "end_pos": 183, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTS9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTS9" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser183" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTS9", "url": "https://www.uniprot.org/uniprotkb/Q9LTS9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTS9", "url": "https://www.uniprot.org/uniprotkb/Q9LTS9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LTS9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTS9" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT5G56910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G56910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { 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protein", "type": "synonym", "evidence": [ { "id": "NP_187939", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187939" }, { "id": "Q9LTT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTT7", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "DJC66", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7", "locus": {} } ], "crossref": [ { "id": "AT3G13310", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G13310", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820531", "url": "https://www.ncbi.nlm.nih.gov/gene/820531", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LTT7", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LTT7*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G13310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RFSPGNC", "url": "https://omabrowser.org/oma/group/RFSPGNC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45432", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45432", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45432:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45432:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187939", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187939", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G13310", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G13310", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTT7", "url": 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Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTT7", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTT7", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G13310", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13310", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "Q9LTT7", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LTT7", "url": "https://www.uniprot.org/uniprotkb/Q9LTT7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], 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"https://www.uniprot.org/uniprotkb/Q9LTU6", "locus": {} } ], "crossref": [ { "id": "cd22391", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22391", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22392", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22392", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820521", "url": "https://www.ncbi.nlm.nih.gov/gene/820521", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036612", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036612", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055211", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055211", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055212", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055212", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G13230", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13230", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TPLRNNW", "url": "https://omabrowser.org/oma/group/TPLRNNW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LTU6", "url": "https://www.orthodb.org/?gene=Q9LTU6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12826", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12826", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12826:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12826:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF22891", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22891", "database": "Pfam", 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OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTU6-1" }, "isoforms": [ { "isoform_ac": "Q9LTU6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6/entry#Q9LTU6-1", "sequence": { "sequence": "MAESTQMEVETATEGTVPLPPKPTFKPLKAHEMSDGKVQFRKIAVPPNRYSPLKKAWLDIYTPIYDQMKVDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDIPDAISLLRMDELYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTRIHILGAFSNIKVARSSLCSLIMGSPAGKVYSKLRSVSARLNE", "length": 215, "header": "tr|Q9LTU6-1|Q9LTU6_ARATH Isoform 1 of RNA-binding KH domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTU6-1" }, "locus": { "chromosome": "3", "start_pos": 4269943, "end_pos": 4271375, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G13230.1", "url": "https://www.ensemblgenomes.org/id/AT3G13230.1" }, { "database": "Ensembl Peptide", "id": "AT3G13230.1", "url": "https://www.ensemblgenomes.org/id/AT3G13230.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU6", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU6", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G13230", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13230", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287B6J3-1", "protein_name": "RNA-binding protein PNO1", "gene_name": "PNO1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METQMEAQSPLAEDGFTQVTRKGSRRAKKRQAEQLSATEEGGGASHMDTEEARPAKRPIFPPLSGDGFLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALVRLDDLFLETFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRAADRF", "length": 252 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q54K66-1", "protein_name": "RNA-binding protein pno1", "gene_name": "pno1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVIETKEVENIISEQSLKTESVKVSNKRSRDDEEMKDSEGGVKKTSFPQISVEDTEEEQIRKVTIPFNRIAPLKANWQQIYEPIVTHLKLQIRMNTKTRKVELKTSKSTKETSALQKAADFVHAFSLGFEVNDAVAILRLDDLYIDSFDVEDVKILKGDNLSRAIGRVAGKDGKTKFTIENVTKTRIVLADKRIHILGSYSNIRVAKDAICDLIIGSPPGKVYAKLRTVSSRIAERF", "length": 239 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5F414-1", "protein_name": "RNA-binding protein PNO1", "gene_name": "PNO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "METEAADESGFTSVASKRGRRKRRAAGAEPMEAAESAEAAGPQPSKRPAFPPLPAAALGVGKGEVRKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRFNLKTRNVEIKTCSETKDLSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAAERF", "length": 242 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6VBQ8-1", "protein_name": "RNA-binding protein PNO1", "gene_name": "Pno1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METQNTGTEDGFTPVTHRGGRRAKKRQAEQSSAAGQDGDAGRMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF", "length": 248 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7YRD0-1", "protein_name": "RNA-binding protein PNO1", "gene_name": "PNO1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MESVMEAQSPLAEDGFSQVTRKGGRRAKKRQAEQPSTQEEGGDATCMDTEEARPAKRPVFPPLSGDGFLSGKEETRKIPVPANRYTPLKENWLKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRAADRF", "length": 252 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q99216-1", "protein_name": "Pre-rRNA-processing protein PNO1", "gene_name": "PNO1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVAPTALKKATVTPVSGQDGGSSRIIGINNTESIDEDDDDDVLLDDSDNNTAKEEVEGEEGSRKTHESKTVVVDDQGKPRFTSASKTQGNKIKFESRKIMVPPHRMTPLRNSWTKIYPPLVEHLKLQVRMNLKTKSVELRTNPKFTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMARESVVSLILGSPPGKVYGNLRTVASRLKERY", "length": 274 }, "evidence": [ { "id": "Q9LTU6", "url": "https://omabrowser.org/oma/group/Q9LTU6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9CPS7-1", "protein_name": "RNA-binding protein PNO1", "gene_name": "Pno1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU6", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU6", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 161, "end_pos": 163, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTU6" }, { "id": "SM00322", "database": "SMART", "url": 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}, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTU7-1", "uniprot_ac": "Q9LTU7", "uniprot_id": "Q9LTU7_ARATH", "mass": { "chemical_mass": 32297.0, "monoisotopic_mass": 32297.0 }, "refseq": { "ac": "NP_683561", "name": "kinesin-like protein (DUF868)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683561" }, "gene_names": [], "protein_names": [ { "name": "Kinesin-like protein (DUF868)", "type": "synonym", "evidence": [ { "id": "Q9LTU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7/entry#names_and_taxonomy" } ] }, { "name": "kinesin-like protein (DUF868)", "type": "synonym", "evidence": [ { "id": "NP_683561", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683561" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTU7", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7", "locus": {} } ], "crossref": [ { "id": "AT3G13229", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G13229", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820520", "url": "https://www.ncbi.nlm.nih.gov/gene/820520", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008586", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008586", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G13229", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13229", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TATWCKS", "url": "https://omabrowser.org/oma/group/TATWCKS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31972", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31972", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31972:SF54", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31972:SF54", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05910", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05910", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_683561", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683561", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G13229", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G13229", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTU7", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTU7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFNQSSSVSLIYVVEIAKTPQNVDVTWSKTTSSHSLTIKIENVKDEQQNHHQPVKIDLSGSSFWAKKGLKSLEANGTRVDVYWDFRQAKFSNFPEPSSGFYVSLVSQNATVLTIGDLRNEALKRTKKNPSATEAALVSKQEHVHGKRVFYTRTAFGGGESRRENEVVIETSLSGPSDPEMWITVDGVPAIRIMNLNWRFRGNEVVTVSDGVSLEIFWDVHDWLFEPSGSSSGLFVFKPKAGFESKCLSFNGGYGDGEGEDHDVEDDDSSPKYCHVLYAVKELEFPCQKN", "length": 289, "header": "tr|Q9LTU7-1|Q9LTU7_ARATH Isoform 1 of Kinesin-like protein (DUF868) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTU7-1" }, "isoforms": [ { "isoform_ac": "Q9LTU7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7/entry#Q9LTU7-1", "sequence": { "sequence": "MFNQSSSVSLIYVVEIAKTPQNVDVTWSKTTSSHSLTIKIENVKDEQQNHHQPVKIDLSGSSFWAKKGLKSLEANGTRVDVYWDFRQAKFSNFPEPSSGFYVSLVSQNATVLTIGDLRNEALKRTKKNPSATEAALVSKQEHVHGKRVFYTRTAFGGGESRRENEVVIETSLSGPSDPEMWITVDGVPAIRIMNLNWRFRGNEVVTVSDGVSLEIFWDVHDWLFEPSGSSSGLFVFKPKAGFESKCLSFNGGYGDGEGEDHDVEDDDSSPKYCHVLYAVKELEFPCQKN", "length": 289, "header": "tr|Q9LTU7-1|Q9LTU7_ARATH Isoform 1 of Kinesin-like protein (DUF868) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTU7-1" }, "locus": { "chromosome": "3", "start_pos": 4268382, "end_pos": 4269691, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G13229.1", "url": "https://www.ensemblgenomes.org/id/AT3G13229.1" }, { "database": "Ensembl Peptide", "id": "AT3G13229.1", "url": "https://www.ensemblgenomes.org/id/AT3G13229.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU7", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU7", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G13229", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13229", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTU7", "url": "https://www.uniprot.org/uniprotkb/Q9LTU7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3, "end_pos": 5, "annotation": "n_glycosylation_sequon" }, { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], 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"https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G12860", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTV0", "url": "https://www.uniprot.org/uniprotkb/Q9LTV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTV0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTV0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKIYLLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDALNQINAVSEGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATKIPCQSNEFVHELLRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKEVLENLEKKDEGEKTVDASEKKKKRKTEEKEEEKEEEKSKKKKKKSKAVEGEELTATDNGHSKKKKKTKSQDDE", "length": 499, "header": "tr|Q9LTV0-1|Q9LTV0_ARATH Isoform 1 of Nucleolar protein 56 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTV0-1" }, "isoforms": [ { "isoform_ac": "Q9LTV0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTV0/entry#Q9LTV0-1", "sequence": { "sequence": "MKIYLLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDALNQINAVSEGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATKIPCQSNEFVHELLRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKEVLENLEKKDEGEKTVDASEKKKKRKTEEKEEEKEEEKSKKKKKKSKAVEGEELTATDNGHSKKKKKTKSQDDE", "length": 499, "header": "tr|Q9LTV0-1|Q9LTV0_ARATH Isoform 1 of Nucleolar protein 56 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTV0-1" }, "locus": { "chromosome": "3", "start_pos": 4091567, "end_pos": 4094195, "strand": "+", "evidence": [ { "database": 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Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTV0", "url": "https://www.uniprot.org/uniprotkb/Q9LTV0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": 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Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, 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"categories": [ "Protein Classification" ] }, { "id": "A0A1I9LMT6", "url": "https://www.orthodb.org/?gene=A0A1I9LMT6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4J9U9", "url": "https://www.orthodb.org/?gene=F4J9U9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LTX1", "url": "https://www.orthodb.org/?gene=Q9LTX1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14738", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14738", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14738:SF32", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14738:SF32", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01480", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01480", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001325953", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325953", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G12640", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G12640", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LMT6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LMT6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMT6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J9U9", "url": "https://www.uniprot.org/uniprotkb/F4J9U9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J9U9-1", "url": "https://www.uniprot.org/uniprotkb/F4J9U9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTX1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEEANNELKIFLGDDSDSFVAWLWDHLAESVDEYFSSNVEGTTIKSSLISSHEDKALVPLDSEYDKGRSDKSNGARRGRQWRSQPTNVSEIPPLLSSEVHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQREAKPDVSRRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLGEVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPDFSSDRGRLGSSVNVSHPSTYLGNRINNPNSLQHRLVDDSKRVKGTNYQNRLPEVATKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNVKPAASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSRGGRFTRAPSYFRGGAVRGRSVVRGGGRSMQWKRDSADTGNNNNVAPNNARSLTYVRAESKSDGVAND", "length": 662, "header": "tr|Q9LTX1-1|Q9LTX1_ARATH Isoform 1 of RNA binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX1-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LMT6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1/entry#A0A1I9LMT6-1", "sequence": { "sequence": "MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEEANNELKIFLGDDSDSFVAWLWDHLAESVDEYFSSNVEGTTIKSSLISSHEDKALVPLDSEYDKGRSDKSNGARRGRQWRSQPTNVSEIPPLLSSEVHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQREAKPDVSRRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLGEVSPKDEESRNFSQDFSSDRGRLGSSVNVSHPSTYLGNRINNPNSLQHRLVDDSKRVKGTNYQNRLPEVATKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNVKPAASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSRGGRFTRAPSYFRGGAVRGRSVVRGGGRSMQWKRDSADTGNNNNVAPNNARSLTYVRAESKSDGVAND", "length": 630, "header": "tr|A0A1I9LMT6-1|A0A1I9LMT6_ARATH Computationally mapped isoform of RNA binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX1-1" }, "locus": { "chromosome": "3", "start_pos": 4014213, "end_pos": 4017675, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G12640.4", "url": "https://www.ensemblgenomes.org/id/AT3G12640.4" }, { "database": "Ensembl Peptide", "id": "AT3G12640.4", "url": "https://www.ensemblgenomes.org/id/AT3G12640.4" } ] } }, { "isoform_ac": "F4J9U9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1/entry#F4J9U9-1", "sequence": { "sequence": "MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEEANNELKIFLGDDSDSFVAWLWDHLAESVDEYFSSNVEGTTIKSSLISSHEDKALVPLDSEYDKGRSDKSNGARRGRQWRSQPTNVSEIPPLLSSEAQSQRKRSRTDDSRNEQREAKPDVSRRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLGEVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPDFSSDRGRLGSSVNVSHPSTYLGNRINNPNSLQHRLVDDSKRVKGTNYQNRLPEVATKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNVKPAASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSRGGRFTRAPSYFRGGAVRGRSVVRGGGRSMQWKRDSADTGNNNNVAPNNARSLTYVRAESKSDGVAND", "length": 638, "header": "tr|F4J9U9-1|F4J9U9_ARATH Computationally mapped isoform of RNA binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX1-1" }, "locus": { "chromosome": "3", "start_pos": 4014213, "end_pos": 4017869, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G12640.1", "url": "https://www.ensemblgenomes.org/id/AT3G12640.1" }, { "database": "Ensembl Peptide", "id": "AT3G12640.1", "url": "https://www.ensemblgenomes.org/id/AT3G12640.1" } ] } }, { "isoform_ac": "Q9LTX1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1/entry#Q9LTX1-1", "sequence": { "sequence": "MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEEANNELKIFLGDDSDSFVAWLWDHLAESVDEYFSSNVEGTTIKSSLISSHEDKALVPLDSEYDKGRSDKSNGARRGRQWRSQPTNVSEIPPLLSSEVHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQREAKPDVSRRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLGEVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPDFSSDRGRLGSSVNVSHPSTYLGNRINNPNSLQHRLVDDSKRVKGTNYQNRLPEVATKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNVKPAASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSRGGRFTRAPSYFRGGAVRGRSVVRGGGRSMQWKRDSADTGNNNNVAPNNARSLTYVRAESKSDGVAND", "length": 662, "header": "tr|Q9LTX1-1|Q9LTX1_ARATH Isoform 1 of RNA binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX1-1" }, "locus": { "chromosome": "3", "start_pos": 4014059, "end_pos": 4017675, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G12640.3", "url": "https://www.ensemblgenomes.org/id/AT3G12640.3" }, { "database": "Ensembl Peptide", "id": "AT3G12640.3", "url": "https://www.ensemblgenomes.org/id/AT3G12640.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 235, "end_pos": 235, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser235" }, { "start_pos": 238, "end_pos": 238, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser238" }, { "start_pos": 240, "end_pos": 240, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser240" }, { "start_pos": 309, "end_pos": 309, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser309" }, { "start_pos": 315, "end_pos": 315, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser315" }, { "start_pos": 3, "end_pos": 3, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser3" }, { "start_pos": 415, "end_pos": 415, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser415" }, { "start_pos": 422, "end_pos": 422, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Thr422" }, { "start_pos": 600, "end_pos": 600, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Thr600" }, { "start_pos": 604, "end_pos": 604, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser604" }, { "start_pos": 654, "end_pos": 654, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTX1" } ], "site_lbl": "Ser654" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. Proteomics", "date": "2009", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G12640", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G12640", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of mRNA stability", "id": "GO:0043488", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043488", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "poly(A) binding", "id": "GO:0008143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008143", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 317, "end_pos": 319, "annotation": "n_glycosylation_sequon" }, { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 346, "end_pos": 348, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 485, "end_pos": 487, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTX1" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 504, "end_pos": 581, "start_aa": "Arg", "end_aa": 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H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX5", "url": "https://www.uniprot.org/uniprotkb/Q9LTX5" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX5", "url": "https://www.uniprot.org/uniprotkb/Q9LTX5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G49950", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G49950", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { 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"categories": [ "Enzyme and Pathway" ] }, { "id": "TCCCDEC", "url": "https://omabrowser.org/oma/group/TCCCDEC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31066", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066:SF47", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31066:SF47", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00564", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00564", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G49920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G49920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTX8", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTX8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEERSPSKVKFMCSFGGRILPRPSDSVLKYVGGETRVVAVSPDISFSELMKKLTAITENDIVLKYQIIPEDLDALVSVKSDEDVKHMIEEYNRHETPKLRTFLFPANPVVLESQLGPIEPQTIEQRYIEAINGILRTSKSATALRAPIKTRPSFTVSTCSSPKSESPDGYSHEPPETSFQNNYQLSRLYPMHRVHSSPNISHQLQPHSHYHNHNHNAYVQPPTNYLTCRPRLPTPLEIPRGIGWDQSYTTTHNSGGGNGKYGCNDDRRFWGRASSVPQSPRNHGLRL", "length": 288, "header": "tr|Q9LTX8-1|Q9LTX8_ARATH Isoform 1 of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX8-1" }, "isoforms": [ { "isoform_ac": "Q9LTX8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8/entry#Q9LTX8-1", "sequence": { "sequence": "MAEERSPSKVKFMCSFGGRILPRPSDSVLKYVGGETRVVAVSPDISFSELMKKLTAITENDIVLKYQIIPEDLDALVSVKSDEDVKHMIEEYNRHETPKLRTFLFPANPVVLESQLGPIEPQTIEQRYIEAINGILRTSKSATALRAPIKTRPSFTVSTCSSPKSESPDGYSHEPPETSFQNNYQLSRLYPMHRVHSSPNISHQLQPHSHYHNHNHNAYVQPPTNYLTCRPRLPTPLEIPRGIGWDQSYTTTHNSGGGNGKYGCNDDRRFWGRASSVPQSPRNHGLRL", "length": 288, "header": "tr|Q9LTX8-1|Q9LTX8_ARATH Isoform 1 of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTX8-1" }, "locus": { "chromosome": "5", "start_pos": 20306409, "end_pos": 20307943, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G49920.1", "url": "https://www.ensemblgenomes.org/id/AT5G49920.1" }, { "database": "Ensembl Peptide", "id": "AT5G49920.1", "url": "https://www.ensemblgenomes.org/id/AT5G49920.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX8", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX8", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G49920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G49920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTX8", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTX8" }, { "id": "SM00666", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00666" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PB1", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 105, "start_aa": "Pro", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 200, "end_pos": 202 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTY3-1", "uniprot_ac": "Q9LTY3", "uniprot_id": "Q9LTY3_ARATH", "mass": { "chemical_mass": 75605.0, "monoisotopic_mass": 75605.0 }, "refseq": { "ac": "NP_189384", "name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189384" }, "gene_names": [], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "NP_189384", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189384" }, { "id": "Q9LTY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3", "locus": {} } ], "crossref": [ { "id": "AT3G27470", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G27470", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT3G27473", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G27473", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822368", "url": "https://www.ncbi.nlm.nih.gov/gene/822368", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "822369", "url": "https://www.ncbi.nlm.nih.gov/gene/822369", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007877", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007877", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G27473", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27473", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31210", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31210", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31210:SF38", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31210:SF38", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF154", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF154", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05212", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05212", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189384", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189384", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G27470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT3G27473", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27473", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LSL9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSL9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSM1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSM1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSM2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSM2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTY3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFRLEGHEHRVSIVSSGDSLECDACDRSSGDGFSCSECKFTVHRKCAFVFMTEDIFHHPSHDGHCLKLLTTGAPVHTDSKCHLCGKNTKHLLYHCYDCKVNLDIDCMIDGICTLARLSKPWHPHLLLMVDFSSDMWCDFCYEGGKHGYFCPRCRLVIHESCVSVFDSPEINHPSHLSHPLKLITNGAPDYTEDRSCHICGKETGNLLYHCDICKFNLDMECAVENPIPVALSDLKVHEHTLTLMPRLISFICDACGTKGDRAPYVCVQCDFRMFHQKCARLPRVIHVNHHDHRVSYKYPLGPGEWRCGVCWEEIDWSYGAYSCSLCPNYAIHSLCATRKDVWDGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLSLHNDDEESSLCGACVHPIGSYTFYKCSKSYCGFFLHERCANLATKKRHFLSPQPLDLSLQWIPYVLGRCRACRQMFSEGFIYNSYRDKFDLLCSSITVPFIHGSHDHHLLYYKLRYGQVKTCQNCGIDETEVLGCSKCNYYLDFCCATLPKTVMLPRYDDHPLTLCYGDENASGKYWCDICERETNPKTWFYTCKDCGVTFHILCVVGDIRYAKPGGKINGDYELLANNSSSRPLCSTCHCRCPGPFILNKERNNIFFCSYYCLGLSREHAYSSVDVCPPWAI", "length": 662, "header": "tr|Q9LTY3-1|Q9LTY3_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSL9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3/entry#A0A1I9LSL9-1", "sequence": { "sequence": "MRRPSQMMRLLLTSFFGVIVGFLMGITFPTLTLTKMNLPSTLFPSIDLAYIEDKYSDISRQRLFGSWSSTKGLKLKNDIPDPPYNYNDTKIWVSTNPRGAERLPPDIVTPESDFYLRRLWGDPNEDLTVKQRYLVTFTVGYDQRKNIDTVLKKFSDNFSIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLGVEHFDSEKYLAVVKKHGLEISQPGLEPYEGLTWEMTKKRDDTEVHKHAEERNGWCTDPNLPPCAAFVEIMAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEKIGVVDAQWIIHQGVPSLGNQGQPEQGKQPWEGVRERCRREWTMFQDRLDDAEKAYFEASAHKNASSRPHGECHCHVRIC", "length": 407, "header": "tr|A0A1I9LSL9-1|A0A1I9LSL9_ARATH Computationally mapped isoform of Lysine ketoglutarate reductase trans-splicing protein (DUF707) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTY3-1" }, "locus": { "chromosome": "3", "start_pos": 10163031, "end_pos": 10167511, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27470.5", "url": "https://www.ensemblgenomes.org/id/AT3G27470.5" }, { "database": "Ensembl Peptide", "id": "AT3G27470.5", "url": "https://www.ensemblgenomes.org/id/AT3G27470.5" } ] } }, { "isoform_ac": "A0A1I9LSM1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3/entry#A0A1I9LSM1-1", "sequence": { "sequence": "MTEDIFHHPSHDGHCLKLLTTGAPVHTDSKCHLCGKNTKHLLYHCYDCKVNLDIDCMIDGICTLARLSKPWHPHLLLMVDFSSDMWCDFCYEGGKHGYFCPRCRLVIHESCVSVFDSPEINHPSHLSHPLKLITNGAPDYTEDRSCHICGKETGNLLYHCDICKFNLDMECAVENPIPVALSDLKVHEHTLTLMPRLISFICDACGTKGDRAPYVCVQCDFRMFHQKCARLPRVIHVNHHDHRVSYKYPLGPGEWRCGVCWEEIDWSYGAYSCSLCPNYAIHSLCATRKDVWDGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLSLHNDDEESSLCGACVHPIGSYTFYKCSKSYCGFFLHERCANLATKKRHFLSPQPLDLSLQWIPYVLGRCRACRQMFSEGFIYNSYRDKFDLLCSSITVPFIHGSHDHHLLYYKLRYGQVKTCQNCGIDETEVLGCSKCNYYLDFCCATLPKTVMLPRYDDHPLTLCYGDENASGKYWCDICERETNPKTWFYTCKDCGVTFHILCVVGDIRYAKPGGKINGDYELLANNSSSRPLCSTCHCRCPGPFILNKERNNIFFCSYYCLGLSREHAYSSVDVCPPWAI", "length": 611, "header": "tr|A0A1I9LSM1-1|A0A1I9LSM1_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY3-1" }, "locus": { "chromosome": "3", "start_pos": 10169242, "end_pos": 10172060, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27473.3", "url": "https://www.ensemblgenomes.org/id/AT3G27473.3" }, { "database": "Ensembl Peptide", "id": "AT3G27473.3", "url": "https://www.ensemblgenomes.org/id/AT3G27473.3" } ] } }, { "isoform_ac": "A0A1I9LSM2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3/entry#A0A1I9LSM2-1", "sequence": { "sequence": "MRVVFPYLTHQRLIILLISVTLLSLSPMELQITRKTEVVIYVEKKLETYFIIAIFVSSTWIWNARLKIPYQSLFQISRMFHQKCARLPRVIHVNHHDHRVSYKYPLGPGEWRCGVCWEEIDWSYGAYSCSLCPNYAIHSLCATRKDVWDGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLSLHNDDEESSLCGACVHPIGSYTFYKCSKSYCGFFLHERCANLATKKRHFLSPQPLDLSLQWIPYVLGRCRACRQMFSEGFIYNSYRDKFDLLCSSITVPFIHGSHDHHLLYYKLRYGQVKTCQNCGIDETEVLGCSKCNYYLDFCCATLPKTVMLPRYDDHPLTLCYGDENASGKYWCDICERETNPKTWFYTCKDCGVTFHILCVVGDIRYAKPGGKINGDYELLANNSSSRPLCSTCHCRCPGPFILNKERNNIFFCSYYCLGLSREHAYSSVDVCPPWAI", "length": 467, "header": "tr|A0A1I9LSM2-1|A0A1I9LSM2_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY3-1" }, "locus": { "chromosome": "3", "start_pos": 10169191, "end_pos": 10171279, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27473.2", "url": "https://www.ensemblgenomes.org/id/AT3G27473.2" }, { "database": "Ensembl Peptide", "id": "AT3G27473.2", "url": "https://www.ensemblgenomes.org/id/AT3G27473.2" } ] } }, { "isoform_ac": "Q9LTY3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3/entry#Q9LTY3-1", "sequence": { "sequence": "MTFRLEGHEHRVSIVSSGDSLECDACDRSSGDGFSCSECKFTVHRKCAFVFMTEDIFHHPSHDGHCLKLLTTGAPVHTDSKCHLCGKNTKHLLYHCYDCKVNLDIDCMIDGICTLARLSKPWHPHLLLMVDFSSDMWCDFCYEGGKHGYFCPRCRLVIHESCVSVFDSPEINHPSHLSHPLKLITNGAPDYTEDRSCHICGKETGNLLYHCDICKFNLDMECAVENPIPVALSDLKVHEHTLTLMPRLISFICDACGTKGDRAPYVCVQCDFRMFHQKCARLPRVIHVNHHDHRVSYKYPLGPGEWRCGVCWEEIDWSYGAYSCSLCPNYAIHSLCATRKDVWDGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLSLHNDDEESSLCGACVHPIGSYTFYKCSKSYCGFFLHERCANLATKKRHFLSPQPLDLSLQWIPYVLGRCRACRQMFSEGFIYNSYRDKFDLLCSSITVPFIHGSHDHHLLYYKLRYGQVKTCQNCGIDETEVLGCSKCNYYLDFCCATLPKTVMLPRYDDHPLTLCYGDENASGKYWCDICERETNPKTWFYTCKDCGVTFHILCVVGDIRYAKPGGKINGDYELLANNSSSRPLCSTCHCRCPGPFILNKERNNIFFCSYYCLGLSREHAYSSVDVCPPWAI", "length": 662, "header": "tr|Q9LTY3-1|Q9LTY3_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY3-1" }, "locus": { "chromosome": "3", "start_pos": 10169123, "end_pos": 10171318, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27473.1", "url": "https://www.ensemblgenomes.org/id/AT3G27473.1" }, { "database": "Ensembl Peptide", "id": "AT3G27473.1", "url": "https://www.ensemblgenomes.org/id/AT3G27473.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G27473", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27473", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY3", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 377, "end_pos": 379, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" }, { "start_pos": 607, "end_pos": 609, "annotation": "n_glycosylation_sequon" }, { "start_pos": 608, "end_pos": 610, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LTY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTY3" }, { "id": "PS50081", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50081" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phorbol-ester/DAG-type", "eco_id": "ECO_0000259", "start_pos": 9, "end_pos": 55, "start_aa": "Glu", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTY8-1", "uniprot_ac": "Q9LTY8", "uniprot_id": "Q9LTY8_ARATH", "mass": { "chemical_mass": 17030.0, "monoisotopic_mass": 17030.0 }, "refseq": { "ac": "NP_001118719", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118719" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LTY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001118719", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118719" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTY8", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8", "locus": {} } ], "crossref": [ { "id": "6240623", "url": "https://www.ncbi.nlm.nih.gov/gene/6240623", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G27415", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27415", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LFWRNER", "url": "https://omabrowser.org/oma/group/LFWRNER/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_001118719", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118719", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G27415", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27415", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LTY8", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTY8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKSHATAARTEPETEITSDEAPAAGAEASGPSLAPVPSSEDGDISGVGAGGEEAVGASEELVGPSEESPELESGLEAGVLADDDFGDGEDGEGLGVPVEFFLAMVGAAVGGEVGAEAVGDFGDAAAAGEGEVEFFSPLAFGAFAGVGGSAAKTAVMAKAATARDRSLSVIVILW", "length": 175, "header": "tr|Q9LTY8-1|Q9LTY8_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY8-1" }, "isoforms": [ { "isoform_ac": "Q9LTY8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8/entry#Q9LTY8-1", "sequence": { "sequence": "MKKSHATAARTEPETEITSDEAPAAGAEASGPSLAPVPSSEDGDISGVGAGGEEAVGASEELVGPSEESPELESGLEAGVLADDDFGDGEDGEGLGVPVEFFLAMVGAAVGGEVGAEAVGDFGDAAAAGEGEVEFFSPLAFGAFAGVGGSAAKTAVMAKAATARDRSLSVIVILW", "length": 175, "header": "tr|Q9LTY8-1|Q9LTY8_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LTY8-1" }, "locus": { "chromosome": "3", "start_pos": 10147066, "end_pos": 10147992, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27415.1", "url": "https://www.ensemblgenomes.org/id/AT3G27415.1" }, { "database": "Ensembl Peptide", "id": "AT3G27415.1", "url": "https://www.ensemblgenomes.org/id/AT3G27415.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTY8", "url": "https://www.uniprot.org/uniprotkb/Q9LTY8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen 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"table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LU98-1", "uniprot_ac": "Q9LU98", "uniprot_id": "Q9LU98_ARATH", "mass": { "chemical_mass": 17490.0, "monoisotopic_mass": 17490.0 }, "refseq": { "ac": "NP_566785", "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566785" }, "gene_names": [], "protein_names": [ { "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_566785", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566785" }, { "id": "Q9LU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU98/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, 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"categories": [ "Protein Classification" ] }, { "id": "PTHR31964", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31964", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31964:SF134", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31964:SF134", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_566785", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566785", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G25930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LU98", "url": "https://www.uniprot.org/uniprotkb/Q9LU98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LU98-1", "url": "https://www.uniprot.org/uniprotkb/Q9LU98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKNVMLIIDESNASYDLLIWALENQKDTIESSKVYIFAKQPQNSFTPPTVLSSSVGFAQIFYPFSPNSELIRLAQEKNMKIALGILEKAKKICLNHGIKAETFTDDGDPKDLIRKIIQERNINLIVTSDQQSLKKCTQNTDCSLLVVKKRLRKD", "length": 154, "header": "tr|Q9LU98-1|Q9LU98_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LU98-1" }, "isoforms": [ { "isoform_ac": "Q9LU98-1", "url": "https://www.uniprot.org/uniprotkb/Q9LU98/entry#Q9LU98-1", "sequence": { "sequence": "MKNVMLIIDESNASYDLLIWALENQKDTIESSKVYIFAKQPQNSFTPPTVLSSSVGFAQIFYPFSPNSELIRLAQEKNMKIALGILEKAKKICLNHGIKAETFTDDGDPKDLIRKIIQERNINLIVTSDQQSLKKCTQNTDCSLLVVKKRLRKD", "length": 154, "header": "tr|Q9LU98-1|Q9LU98_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LU98-1" }, "locus": { "chromosome": "3", "start_pos": 9492765, "end_pos": 9494302, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25930.1", 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"database": "UniProtKB", "id": "Q9LU98", "url": "https://www.uniprot.org/uniprotkb/Q9LU98" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LU98", "url": "https://www.uniprot.org/uniprotkb/Q9LU98" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G25930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G25930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": 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"sequence": { "sequence": "MEDLLEERLTRTDSVGNKRVRDGLDLDSPDVKRLRDDLFDDSGLDPVSQDLDSVMKSFENELSTTTAALSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSDSSEVGELCGFEDHVTEFGPCDLGDDGLFEYFDGCLDSGDLFSWRPEFLPAE", "length": 170, "header": "tr|Q9LUA5-1|Q9LUA5_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LUA5-1" }, "locus": { "chromosome": "3", "start_pos": 9463305, "end_pos": 9464676, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G25870.1", "url": "https://www.ensemblgenomes.org/id/AT3G25870.1" }, { "database": "Ensembl Peptide", "id": "AT3G25870.1", "url": "https://www.ensemblgenomes.org/id/AT3G25870.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00628", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00628", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13832", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13832", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_974313", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_974313", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G14740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G14740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUC1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAQYQDLPPLKRLRLLQRDLEAAQQHQLPNQPEMKSLQLPAKKRKQTRVDYDDDDAENSNPTYHCLPAKKRIWAIDPDLLSGGGNPFSPFDLNVEYKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVEDEDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSSKNREKIFSCCLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREGICCSEVLSKRWKDRCYLCKVRRGCVIECSEMRCKLAFHVTCGLKEDLCIEYREGKKSGGIVVGFCNEHTKLWERQQESGKYKIVAREEDKK", "length": 343, "header": "tr|Q9LUC1-1|Q9LUC1_ARATH Isoform 1 of RING/FYVE/PHD zinc finger superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUC1-1" }, "isoforms": [ { "isoform_ac": "Q9LUC1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1/entry#Q9LUC1-1", "sequence": { "sequence": "MDAQYQDLPPLKRLRLLQRDLEAAQQHQLPNQPEMKSLQLPAKKRKQTRVDYDDDDAENSNPTYHCLPAKKRIWAIDPDLLSGGGNPFSPFDLNVEYKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVEDEDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSSKNREKIFSCCLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREGICCSEVLSKRWKDRCYLCKVRRGCVIECSEMRCKLAFHVTCGLKEDLCIEYREGKKSGGIVVGFCNEHTKLWERQQESGKYKIVAREEDKK", "length": 343, "header": "tr|Q9LUC1-1|Q9LUC1_ARATH Isoform 1 of RING/FYVE/PHD zinc finger superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUC1-1" }, "locus": { "chromosome": "3", "start_pos": 4952061, "end_pos": 4953423, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G14740.2", "url": "https://www.ensemblgenomes.org/id/AT3G14740.2" }, { "database": "Ensembl Peptide", "id": "AT3G14740.2", "url": "https://www.ensemblgenomes.org/id/AT3G14740.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 225, "end_pos": 225, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", 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Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "pmid": "" }, { "name": "histone reader activity", "id": "GO:0140566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140566", "evidence": [ { "database": "UniProtKB", "id": "Q9LUC1", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LUC1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUC1" }, { "id": "PS50016", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50016" }, { "id": "PS51805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PHD-type", "eco_id": "ECO_0000259", "start_pos": 150, "end_pos": 203, "start_aa": "Gly", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LUF9-1", "uniprot_ac": "Q9LUF9", "uniprot_id": "Q9LUF9_ARATH", "mass": { "chemical_mass": 25634.0, "monoisotopic_mass": 25634.0 }, "refseq": { "ac": "NP_568729", "name": "Molecular chaperone Hsp40/DnaJ family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568729" }, "gene_names": [ { "name": "MFB16.1", "type": "recommended", "evidence": [ { "id": "Q9LUF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ] }, { "name": "MBA10.7", "type": "synonym", "evidence": [ { "id": "NP_568729", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568729" }, { "id": "Q9LUF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ] }, { "name": "MBA10_7", "type": "synonym", "evidence": [ { "id": "NP_568729", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568729" }, { "id": "Q9LUF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ] }, { "name": "MFB16_1", "type": "synonym", "evidence": [ { "id": "Q9LUF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ] } ], "protein_names": [ { "name": "Molecular chaperone Hsp40/DnaJ family protein", "type": "synonym", "evidence": [ { "id": "NP_568729", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568729" }, { "id": "Q9LUF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUF9", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ], 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"PTHR44137:SF51", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44137:SF51", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_568729", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568729", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G50510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G50510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT5G50620", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G50620", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LUF9", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUF9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMHMDESRKEIIREEAKRAKAIAVEKYKAGDFAGAKEFALKAKQINPALGGLRRLNALLDVCMGFQKQVNGEVDWYDVLAVERTADFITIFNRYSTLAIDISLDRDESVGSGVKEALKILTDASKYFLERRELLPSRRVSGPINQLSRISCEGSKQKEPPPTNLLHVSKLTRMSEDAEIRHDISPNRLRSALARKATSVIKLSLETFVCSSPHNNVGAAEETDNKVMEE", "length": 229, "header": "tr|Q9LUF9-1|Q9LUF9_ARATH Isoform 1 of Molecular chaperone Hsp40/DnaJ family protein OS=Arabidopsis thaliana OX=3702 GN=MFB16.1 PE=4 SV=1 CANONICAL=Q9LUF9-1" }, "isoforms": [ { "isoform_ac": "Q9LUF9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9/entry#Q9LUF9-1", "sequence": { "sequence": "MMHMDESRKEIIREEAKRAKAIAVEKYKAGDFAGAKEFALKAKQINPALGGLRRLNALLDVCMGFQKQVNGEVDWYDVLAVERTADFITIFNRYSTLAIDISLDRDESVGSGVKEALKILTDASKYFLERRELLPSRRVSGPINQLSRISCEGSKQKEPPPTNLLHVSKLTRMSEDAEIRHDISPNRLRSALARKATSVIKLSLETFVCSSPHNNVGAAEETDNKVMEE", "length": 229, "header": "tr|Q9LUF9-1|Q9LUF9_ARATH Isoform 1 of Molecular chaperone Hsp40/DnaJ family protein OS=Arabidopsis thaliana OX=3702 GN=MFB16.1 PE=4 SV=1 CANONICAL=Q9LUF9-1" }, "locus": { "chromosome": "5", "start_pos": 20600727, "end_pos": 20601416, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G50620.1", "url": "https://www.ensemblgenomes.org/id/AT5G50620.1" }, { "database": "Ensembl Peptide", "id": "AT5G50620.1", "url": "https://www.ensemblgenomes.org/id/AT5G50620.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 136, "end_pos": 136, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LUF9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LUF9" } ], "site_lbl": "Ser136" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LUF9", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUF9", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G50510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G50510", "resource": "KEGG Pathway" }, { "id": "ath:AT5G50620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G50620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LUF9", "url": "https://www.uniprot.org/uniprotkb/Q9LUF9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 136 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 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}, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LUG3-1", "uniprot_ac": "Q9LUG3", "uniprot_id": "Q9LUG3_ARATH", "mass": { "chemical_mass": 17962.0, "monoisotopic_mass": 17962.0 }, "refseq": { "ac": "NP_001118684", "name": "F-box associated ubiquitination effector family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118684" }, "gene_names": [], "protein_names": [ { "name": "F-box associated ubiquitination effector family protein", "type": "synonym", "evidence": [ { "id": "NP_001118684", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118684" }, { "id": "Q9LUG3", "database": "UniProtKB", "url": 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"categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G23633", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23633", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CFLEGGF", "url": "https://omabrowser.org/oma/group/CFLEGGF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001118684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118684", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23633", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23633", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J454", "url": 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of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUG3-1" }, "locus": { "chromosome": "3", "start_pos": 8496440, "end_pos": 8497281, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23633.1", "url": "https://www.ensemblgenomes.org/id/AT3G23633.1" }, { "database": "Ensembl Peptide", "id": "AT3G23633.1", "url": "https://www.ensemblgenomes.org/id/AT3G23633.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LUG3", "url": "https://www.uniprot.org/uniprotkb/Q9LUG3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUG3", "url": "https://www.uniprot.org/uniprotkb/Q9LUG3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ 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protein", "type": "synonym", "evidence": [ { "id": "NP_566732", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566732" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUG8", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8", "locus": {} } ], "crossref": [ { "id": "AT3G23600", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G23600", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821939", "url": "https://www.ncbi.nlm.nih.gov/gene/821939", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LUG8", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LUG8*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR002925", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002925", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G23600", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23600", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PEFMNGH", "url": "https://omabrowser.org/oma/group/PEFMNGH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR17630", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17630", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17630:SF97", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17630:SF97", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01738", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01738", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566732", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23600", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23600", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J447", "url": "https://www.uniprot.org/uniprotkb/F4J447", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J447-1", "url": "https://www.uniprot.org/uniprotkb/F4J447-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUG8", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUG8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGPQCCENPPTLNPVSGSGHVEKLGGLDAYVSGSAESKLCVLLISDIFGFEAPNLRALADKVAASGFYVVVPDYFGGDPYNPSNQDRPIPVWIKDHGCDKGFENTKPVLETIKNKGITAIGAAGMCWGAKVVVELSKEELIQAAVLLHPSFVNVDDIKGGKAPIAILGAEIDQMSPPALLKQFEEILSSKPEVNSYVKIHPKVSHGWTVRYNIDEPEAVKAAEEAHKEMLDWFVTYIK", "length": 239, "header": "tr|Q9LUG8-1|Q9LUG8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LUG8-1" }, "isoforms": [ { "isoform_ac": "F4J447-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8/entry#F4J447-1", "sequence": { "sequence": "MSGPQCCENPPTLNPVSGSGHVEKLGGLDAYVSGSAESKLCVLLISDIFGFEAPNLRALADKVAASGFYVVVPDYFGGDPYNPSNQDRPIPVWIKDHGCDKGFENTKPVLETIKNKGITAIGAAGMCWGVVELSKEELIQAAVLLHPSFVNVDDIKGGKAPIAILGAEIDQMSPPALLKQFEEILSSKPEVNSYVKIHPKVSHGWTVRYNIDEPEAVKAAEEAHKEMLDWFVTYIK", "length": 236, "header": "tr|F4J447-1|F4J447_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LUG8-1" }, "locus": { "chromosome": "3", "start_pos": 8473775, "end_pos": 8475888, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23600.2", "url": "https://www.ensemblgenomes.org/id/AT3G23600.2" }, { "database": "Ensembl Peptide", "id": "AT3G23600.2", "url": "https://www.ensemblgenomes.org/id/AT3G23600.2" } ] } }, { "isoform_ac": "Q9LUG8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8/entry#Q9LUG8-1", "sequence": { "sequence": "MSGPQCCENPPTLNPVSGSGHVEKLGGLDAYVSGSAESKLCVLLISDIFGFEAPNLRALADKVAASGFYVVVPDYFGGDPYNPSNQDRPIPVWIKDHGCDKGFENTKPVLETIKNKGITAIGAAGMCWGAKVVVELSKEELIQAAVLLHPSFVNVDDIKGGKAPIAILGAEIDQMSPPALLKQFEEILSSKPEVNSYVKIHPKVSHGWTVRYNIDEPEAVKAAEEAHKEMLDWFVTYIK", "length": 239, "header": "tr|Q9LUG8-1|Q9LUG8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LUG8-1" }, "locus": { "chromosome": "3", "start_pos": 8473627, "end_pos": 8476024, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23600.1", "url": "https://www.ensemblgenomes.org/id/AT3G23600.1" }, { "database": "Ensembl Peptide", "id": "AT3G23600.1", "url": "https://www.ensemblgenomes.org/id/AT3G23600.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 237, "end_pos": 237, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LUG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LUG8" } ], "site_lbl": "Tyr237" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LUG8", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUG8", "url": "https://www.uniprot.org/uniprotkb/Q9LUG8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": 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"https://www.ensemblgenomes.org/id/AT3G22770.1" }, { "database": "Ensembl Peptide", "id": "AT3G22770.1", "url": "https://www.ensemblgenomes.org/id/AT3G22770.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LUI4", "url": "https://www.uniprot.org/uniprotkb/Q9LUI4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUI4", "url": "https://www.uniprot.org/uniprotkb/Q9LUI4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G22770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G22770", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": 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"Protein kinase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_566716", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566716" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUI6", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6", "locus": {} } ], "crossref": [ { "id": "AT3G22750", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G22750", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd13999", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13999", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821846", "url": "https://www.ncbi.nlm.nih.gov/gene/821846", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LUI6", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LUI6*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051681", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051681", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G22750", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G22750", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DMCLGAS", "url": "https://omabrowser.org/oma/group/DMCLGAS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44329", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44329", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44329:SF228", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44329:SF228", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566716", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566716", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "17989", "url": 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"METRNETKASPENNLRNRGADGNNSKKDMIFRADKIDLKNLDIQLEKHLSRVWSRSIEKHPKPKEEWEIELAKLEMRNVIARGAYGIVYKGIYDGQDVAVKVLDWGEDGYATTAETSALRASFRQEVAVWHKLDHPNVTRFVGASMGTANLKIPSSAETENSLPQRACCVVVEYIPGGTLKQYLFRNRRKKLAFKVVVQLALDLSRGLSYLHSERIVHRDVKTENMLLDYQRNLKIADFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPRCCPTALATIMKRCWEANPEKRPEMEEVVSLLEAVDTTKGGGMIPEDQRPGCFCFVSGRGP", "length": 378, "header": "tr|Q9LUI6-1|Q9LUI6_ARATH Isoform 1 of non-specific serine/threonine protein kinase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LUI6-1" }, "isoforms": [ { "isoform_ac": "Q9LUI6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6/entry#Q9LUI6-1", "sequence": { "sequence": 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"database": "iPTMnet", "id": "Q9LUI6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LUI6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Thr7" } ], "glycation": [], "keywords": [ "enzyme" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , 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"gene_name": "ABC1K7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "B9DGY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "B9DGY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ] } ] }, { "uniprot_ac": "C0LGD6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGD6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD6" } ] } ] }, { "uniprot_ac": "C0LGD7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD7" } ] } ] }, { "uniprot_ac": "C0LGD8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGD8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD8" } ] } ] }, { "uniprot_ac": "C0LGD9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_ac": "C0LGE0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_ac": "C0LGE4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ] } ] }, { "uniprot_ac": "C0LGF4", "gene_name": "FEI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_ac": "C0LGF5", "gene_name": "RGI5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_ac": "C0LGG3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG3" } ] } ] }, { "uniprot_ac": "C0LGG4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG4" } ] } ] }, { "uniprot_ac": "C0LGG6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_ac": "C0LGG7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG7" } ] } ] }, { "uniprot_ac": "C0LGG8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_ac": "C0LGG9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG9" } ] } ] }, { "uniprot_ac": "C0LGH2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH2" } ] } ] }, { "uniprot_ac": "C0LGH3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH3" } ] } ] }, { "uniprot_ac": "C0LGH8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ] } ] }, { "uniprot_ac": "C0LGI2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] } ] }, { "uniprot_ac": "C0LGI5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_ac": "C0LGJ1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_ac": "C0LGJ9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] } ] }, { "uniprot_ac": "C0LGK4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] } ] }, { "uniprot_ac": "C0LGK9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] } ] }, { "uniprot_ac": "C0LGL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_ac": "C0LGL9", "gene_name": "FEI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_ac": "C0LGN2", "gene_name": "LRR-RLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_ac": "C0LGP2", "gene_name": "MEE39", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_ac": "C0LGP4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] } ] }, { "uniprot_ac": "C0LGP9", "gene_name": "IMK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] } ] }, { "uniprot_ac": "C0LGQ4", "gene_name": "MDIS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ] } ] }, { "uniprot_ac": "C0LGQ5", "gene_name": "GSO1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_ac": "C0LGQ7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_ac": "C0LGQ9", "gene_name": "GHR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] } ] }, { "uniprot_ac": "C0LGR3", "gene_name": "RGI3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] }, { "uniprot_ac": "C0LGR6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_ac": "C0LGR9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] } ] }, { "uniprot_ac": "C0LGS2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_ac": "C0LGS3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_ac": "C0LGT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_ac": "C0LGT5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] } ] }, { "uniprot_ac": "C0LGT6", "gene_name": "EFR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] } ] }, { "uniprot_ac": "C0LGU0", "gene_name": "PRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_ac": "C0LGU1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] } ] }, { "uniprot_ac": "C0LGU5", "gene_name": "CIK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_ac": "C0LGU7", "gene_name": "MDIS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] } ] }, { "uniprot_ac": "C0LGV0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] } ] }, { "uniprot_ac": "C0LGV1", "gene_name": "RGI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_ac": "C0LGW2", "gene_name": "PAM74", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_ac": "C0LGW6", "gene_name": "ERL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_ac": "C0LGX1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] } ] }, { "uniprot_ac": "C0LGX3", "gene_name": "HSL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_ac": "D7SFH9", "gene_name": "LRK10L-2.6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "sn-glycero-3-phospho-(1'-rac-glycerol) + H2O = sn-glycerol 3-phosphate + glycerol + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] } ] }, { "uniprot_ac": "F4HPN2", "gene_name": "IRE4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] } ] }, { "uniprot_ac": "F4HPR9", "gene_name": "ATMAP4K", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] } ] }, { "uniprot_ac": "F4HQ17", "gene_name": "LRK10L-1.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] } ] }, { "uniprot_ac": "F4HQ20", "gene_name": "LRK10L-2.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] } ] }, { "uniprot_ac": "F4HQ22", "gene_name": "LRK10L-2.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] } ] }, { "uniprot_ac": "F4HQ23", "gene_name": "LRK10L-2.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] } ] }, { "uniprot_ac": "F4HQ34", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] } ] }, { "uniprot_ac": "F4HRJ4", "gene_name": "MAPKKK3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] } ] }, { "uniprot_ac": "F4HU55", "gene_name": "BSK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] } ] }, { "uniprot_ac": "F4HVB3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] } ] }, { "uniprot_ac": "F4HVH9", "gene_name": "RAF11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] } ] }, { "uniprot_ac": "F4HWU0", "gene_name": "CARK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] } ] }, { "uniprot_ac": "F4HX16", "gene_name": "PBL41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] } ] }, { "uniprot_ac": "F4HXP9", "gene_name": "XI-C", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] } ] }, { "uniprot_ac": "F4HYG2", "gene_name": "IRE3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] } ] }, { "uniprot_ac": "F4I065", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] } ] }, { "uniprot_ac": "F4I0Z0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] } ] }, { "uniprot_ac": "F4I2K0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] } ] }, { "uniprot_ac": "F4I2N7", "gene_name": "RLK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] } ] }, { "uniprot_ac": "F4I3K4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] } ] }, { "uniprot_ac": "F4I3M3", "gene_name": "BSK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] } ] }, { "uniprot_ac": "F4I3V3", "gene_name": "LRK10L-1.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] } ] }, { "uniprot_ac": "F4I4F2", "gene_name": "RHS3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] } ] }, { "uniprot_ac": "F4I6E4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] } ] }, { "uniprot_ac": "F4I7Y4", "gene_name": "BSK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] } ] }, { "uniprot_ac": "F4IAN2", "gene_name": "M3KDELTA7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] } ] }, { "uniprot_ac": "F4IB60", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] } ] }, { "uniprot_ac": "F4IB76", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] } ] }, { "uniprot_ac": "F4IP61", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] } ] }, { "uniprot_ac": "F4IPV6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] } ] }, { "uniprot_ac": "F4IS56", "gene_name": "ILK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] } ] }, { "uniprot_ac": "F4IV25", "gene_name": "PAX", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] } ] }, { "uniprot_ac": "F4IVI0", "gene_name": "BUB1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] } ] }, { "uniprot_ac": "F4J0D2", "gene_name": "PBL36", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_ac": "F4J3A9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] } ] }, { "uniprot_ac": "F4J3H7", "gene_name": "ZRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] } ] }, { "uniprot_ac": "F4J551", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] } ] }, { "uniprot_ac": "F4J6F6", "gene_name": "IREH1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] } ] }, { "uniprot_ac": "F4J927", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] } ] }, { "uniprot_ac": "F4J982", "gene_name": "SRPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] } ] }, { "uniprot_ac": "F4J9G8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] } ] }, { "uniprot_ac": "F4JC18", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] } ] }, { "uniprot_ac": "F4JDN8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] } ] }, { "uniprot_ac": "F4JEQ2", "gene_name": "PBL23", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] } ] }, { "uniprot_ac": "F4JI10", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] } ] }, { "uniprot_ac": "F4JN22", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] } ] }, { "uniprot_ac": "F4JPT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] } ] }, { "uniprot_ac": "F4JPX3", "gene_name": "PBL20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] } ] }, { "uniprot_ac": "F4JQX7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] } ] }, { "uniprot_ac": "F4JSF8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] } ] }, { "uniprot_ac": "F4JTP5", "gene_name": "STY46", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] } ] }, { "uniprot_ac": "F4JVS7", "gene_name": "MAPKKK16", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] } ] }, { "uniprot_ac": "F4JY37", "gene_name": "RUK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JY37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ] } ] }, { "uniprot_ac": "F4JZW1", "gene_name": "PBL13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_ac": "F4K645", "gene_name": "RAF10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] } ] }, { "uniprot_ac": "F4K6B8", "gene_name": "RGI4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] } ] }, { "uniprot_ac": "F4KA50", "gene_name": "LRK10L-2.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] } ] }, { "uniprot_ac": "F4KA51", "gene_name": "LRK10L-2.3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] } ] }, { "uniprot_ac": "F4KEF0", "gene_name": "MUL8.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] } ] }, { "uniprot_ac": "F4KFD4", "gene_name": "MYH9.10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] } ] }, { "uniprot_ac": "F4KI00", "gene_name": "ATRLCK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] } ] }, { "uniprot_ac": "O04086", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] } ] }, { "uniprot_ac": "O04533", "gene_name": "LECRK52", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] } ] }, { "uniprot_ac": "O04534", "gene_name": "LECRK51", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] } ] }, { "uniprot_ac": "O22040", "gene_name": "ANP1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] } ] }, { "uniprot_ac": "O22042", "gene_name": "ANP3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] } ] }, { "uniprot_ac": "O22178", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] } ] }, { "uniprot_ac": "O22476", "gene_name": "BRI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] } ] }, { "uniprot_ac": "O22558", "gene_name": "STY8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] } ] }, { "uniprot_ac": "O22764", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] } ] }, { "uniprot_ac": "O22833", "gene_name": "LECRK54", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] } ] }, { "uniprot_ac": "O22834", "gene_name": "LECRK53", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] } ] }, { "uniprot_ac": "O22932", "gene_name": "CIPK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] } ] }, { "uniprot_ac": "O22971", "gene_name": "CIPK13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] } ] }, { "uniprot_ac": "O23081", "gene_name": "CRK41", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O23081", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23081" } ] } ] }, { "uniprot_ac": "O23082", "gene_name": "CRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] } ] }, { "uniprot_ac": "O23145", "gene_name": "ASK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] } ] }, { "uniprot_ac": "O23236", "gene_name": "MPK14", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] } ] }, { "uniprot_ac": "O23304", "gene_name": "BLUS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] } ] }, { "uniprot_ac": "O23334", "gene_name": "DL3430W", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] } ] }, { "uniprot_ac": "O24527", "gene_name": "SIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] } ] }, { "uniprot_ac": "O48814", "gene_name": "BIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] } ] }, { "uniprot_ac": "O48837", "gene_name": "LECRKS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] } ] }, { "uniprot_ac": "O48963", "gene_name": "PHOT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] } ] }, { "uniprot_ac": "O49318", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] } ] }, { "uniprot_ac": "O49338", "gene_name": "CARK9", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "O49338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49338" } ] } ] }, { "uniprot_ac": "O49445", "gene_name": "LECRK72", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] } ] }, { "uniprot_ac": "O49545", "gene_name": "BAM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] } ] }, { "uniprot_ac": "O49564", "gene_name": "CRK27", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O49564", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49564" } ] } ] }, { "uniprot_ac": "O49717", "gene_name": "CPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] } ] }, { "uniprot_ac": "O49839", "gene_name": "PBL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] } ] }, { "uniprot_ac": "O49840", "gene_name": "PBL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] } ] }, { "uniprot_ac": "O64477", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] } ] }, { "uniprot_ac": "O64556", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] } ] }, { "uniprot_ac": "O64573", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] } ] }, { "uniprot_ac": "O64629", "gene_name": "AUR3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] } ] }, { "uniprot_ac": "O64639", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] } ] }, { "uniprot_ac": "O64682", "gene_name": "PID", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] } ] }, { "uniprot_ac": "O64768", "gene_name": "RAF24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] } ] }, { "uniprot_ac": "O64770", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] } ] }, { "uniprot_ac": "O64771", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] } ] }, { "uniprot_ac": "O64774", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] } ] }, { "uniprot_ac": "O64776", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] } ] }, { "uniprot_ac": "O64777", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] } ] }, { "uniprot_ac": "O64778", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] } ] }, { "uniprot_ac": "O64780", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] } ] }, { "uniprot_ac": "O64781", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] } ] }, { "uniprot_ac": "O64782", "gene_name": "SD129", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] } ] }, { "uniprot_ac": "O64783", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] } ] }, { "uniprot_ac": "O64784", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] } ] }, { "uniprot_ac": "O64793", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] } ] }, { "uniprot_ac": "O64794", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] } ] }, { "uniprot_ac": "O64812", "gene_name": "SRK2J", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] } ] }, { "uniprot_ac": "O64816", "gene_name": "CKA4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] } ] }, { "uniprot_ac": "O64817", "gene_name": "CKA3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] } ] }, { "uniprot_ac": "O64825", "gene_name": "LYK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] } ] }, { "uniprot_ac": "O64842", "gene_name": "PBL12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] } ] }, { "uniprot_ac": "O65238", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] } ] }, { "uniprot_ac": "O65405", "gene_name": "CRK28", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] } ] }, { "uniprot_ac": "O65440", "gene_name": "BAM3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] } ] }, { "uniprot_ac": "O65468", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65468", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65468" } ] } ] }, { "uniprot_ac": "O65472", "gene_name": "CRK12", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65472" } ] } ] }, { "uniprot_ac": "O65476", "gene_name": "CRK16", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65476" } ] } ] }, { "uniprot_ac": "O65479", "gene_name": "CRK20", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65479" } ] } ] }, { "uniprot_ac": "O65482", "gene_name": "CRK23", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65482", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65482" } ] } ] }, { "uniprot_ac": "O65483", "gene_name": "CRK24", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65483", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65483" } ] } ] }, { "uniprot_ac": "O65530", "gene_name": "PERK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] } ] }, { "uniprot_ac": "O65554", "gene_name": "CIPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] } ] }, { "uniprot_ac": "O65924", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] } ] }, { "uniprot_ac": "O80345", "gene_name": "CDKF-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] } ] }, { "uniprot_ac": "O80396", "gene_name": "MKK3", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] } ] }, { "uniprot_ac": "O80397", "gene_name": "MKK4", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] } ] }, { "uniprot_ac": "O80528", "gene_name": "HASPIN", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] } ] }, { "uniprot_ac": "O80673", "gene_name": "CRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] } ] }, { "uniprot_ac": "O80719", "gene_name": "CARK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] } ] }, { "uniprot_ac": "O80888", "gene_name": "MAPKKK17", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] } ] }, { "uniprot_ac": "O80902", "gene_name": "CIPK22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] } ] }, { "uniprot_ac": "O80939", "gene_name": "LECRK41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] } ] }, { "uniprot_ac": "O80963", "gene_name": "CCR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] } ] }, { "uniprot_ac": "O81064", "gene_name": "PBL37", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] } ] }, { "uniprot_ac": "O81067", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] } ] }, { "uniprot_ac": "O81069", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] } ] }, { "uniprot_ac": "O81291", "gene_name": "LECRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] } ] }, { "uniprot_ac": "O81292", "gene_name": "LECRK43", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] } ] }, { "uniprot_ac": "O81472", "gene_name": "MEKK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] } ] }, { "uniprot_ac": "O81832", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] } ] }, { "uniprot_ac": "O81833", "gene_name": "SD11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] } ] }, { "uniprot_ac": "O81905", "gene_name": "SD18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] } ] }, { "uniprot_ac": "O81906", "gene_name": "B120", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] } ] }, { "uniprot_ac": "O82318", "gene_name": "SKM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] } ] }, { "uniprot_ac": "O82754", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] } ] }, { "uniprot_ac": "P0C5E2", "gene_name": "LRK10L-1.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] } ] }, { "uniprot_ac": "P0DKI6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] } ] }, { "uniprot_ac": "P24100", "gene_name": "CDKA-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] } ] }, { "uniprot_ac": "P25859", "gene_name": "CDKB1-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] } ] }, { "uniprot_ac": "P27450", "gene_name": "CST", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] } ] }, { "uniprot_ac": "P42158", "gene_name": "CKL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] } ] }, { "uniprot_ac": "P42818", "gene_name": "ATPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] } ] }, { "uniprot_ac": "P43288", "gene_name": "ASK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] } ] }, { "uniprot_ac": "P43289", "gene_name": "ASK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] } ] }, { "uniprot_ac": "P43291", "gene_name": "SRK2A", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] } ] }, { "uniprot_ac": "P43292", "gene_name": "SRK2G", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] } ] }, { "uniprot_ac": "P43293", "gene_name": "PBL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] } ] }, { "uniprot_ac": "P43294", "gene_name": "MHK", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] } ] }, { "uniprot_ac": "P43298", "gene_name": "TMK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] } ] }, { "uniprot_ac": "P46573", "gene_name": "PBL10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] } ] }, { "uniprot_ac": "P47735", "gene_name": "RLK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] } ] }, { "uniprot_ac": "P51566", "gene_name": "AFC1", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] } ] }, { "uniprot_ac": "P51567", "gene_name": "AFC2", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] } ] }, { "uniprot_ac": "P51568", "gene_name": "AFC3", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] } ] }, { "uniprot_ac": "P92937", "gene_name": "CIPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] } ] }, { "uniprot_ac": "P92958", "gene_name": "KIN11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] } ] }, { "uniprot_ac": "P93025", "gene_name": "PHOT2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] } ] }, { "uniprot_ac": "P93050", "gene_name": "RKF3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] } ] }, { "uniprot_ac": "P93749", "gene_name": "CARK4", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "P93749", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93749" } ] } ] }, { "uniprot_ac": "P93756", "gene_name": "SD31", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] } ] }, { "uniprot_ac": "P93759", "gene_name": "CPK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] } ] }, { "uniprot_ac": "Q05609", "gene_name": "CTR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] } ] }, { "uniprot_ac": "Q05999", "gene_name": "D6PKL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] } ] }, { "uniprot_ac": "Q06548", "gene_name": "PBL9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] } ] }, { "uniprot_ac": "Q06850", "gene_name": "CPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] } ] }, { "uniprot_ac": "Q08466", "gene_name": "CKA2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] } ] }, { "uniprot_ac": "Q08467", "gene_name": "CKA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] } ] }, { "uniprot_ac": "Q0PW40", "gene_name": "CRK13", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] } ] }, { "uniprot_ac": "Q0V7T5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] } ] }, { "uniprot_ac": "Q0WNY5", "gene_name": "WAKL18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0WNY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WNY5" } ] } ] }, { "uniprot_ac": "Q0WPH8", "gene_name": "NEK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] } ] }, { "uniprot_ac": "Q0WRY5", "gene_name": "PBL7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] } ] }, { "uniprot_ac": "Q0WVM4", "gene_name": "CIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_ac": "Q1PDV6", "gene_name": "PBL27", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] } ] }, { "uniprot_ac": "Q1PE17", "gene_name": "CPK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] } ] }, { "uniprot_ac": "Q1PE89", "gene_name": "PBL24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] } ] }, { "uniprot_ac": "Q1PEM5", "gene_name": "PERK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] } ] }, { "uniprot_ac": "Q1PFB9", "gene_name": "AGC1-7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] } ] }, { "uniprot_ac": "Q1PFH8", "gene_name": "CPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] } ] }, { "uniprot_ac": "Q2MHE4", "gene_name": "HT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] } ] }, { "uniprot_ac": "Q2QAV0", "gene_name": "TIO", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] } ] }, { "uniprot_ac": "Q2V338", "gene_name": "WNK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] } ] }, { "uniprot_ac": "Q2V419", "gene_name": "CDKB1-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] } ] }, { "uniprot_ac": "Q2V452", "gene_name": "CIPK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] } ] }, { "uniprot_ac": "Q38868", "gene_name": "CPK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38868", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38868" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38868", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38868" } ] } ] }, { "uniprot_ac": "Q38869", "gene_name": "CPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38869", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38869" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38869", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38869" } ] } ] }, { "uniprot_ac": "Q38870", "gene_name": "CPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38870", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38870" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38870", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38870" } ] } ] }, { "uniprot_ac": "Q38871", "gene_name": "CPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] } ] }, { "uniprot_ac": "Q38872", "gene_name": "CPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] } ] }, { "uniprot_ac": "Q38873", "gene_name": "CPK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] } ] }, { "uniprot_ac": "Q38997", "gene_name": "KIN10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] } ] }, { "uniprot_ac": "Q39008", "gene_name": "MEKK1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] } ] }, { "uniprot_ac": "Q39010", "gene_name": "ASK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] } ] }, { "uniprot_ac": "Q39011", "gene_name": "ASK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] } ] }, { "uniprot_ac": "Q39012", "gene_name": "ASK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39012", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39012" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39012", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39012" } ] } ] }, { "uniprot_ac": "Q39016", "gene_name": "CPK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39016", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39016" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39016", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39016" } ] } ] }, { "uniprot_ac": "Q39019", "gene_name": "ASK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39019", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39019" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39019", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39019" } ] } ] }, { "uniprot_ac": "Q39021", "gene_name": "MPK1", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] } ] }, { "uniprot_ac": "Q39022", "gene_name": "MPK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] } ] }, { "uniprot_ac": "Q39023", "gene_name": "MPK3", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] } ] }, { "uniprot_ac": "Q39024", "gene_name": "MPK4", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] } ] }, { "uniprot_ac": "Q39025", "gene_name": "MPK5", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] } ] }, { "uniprot_ac": "Q39026", "gene_name": "MPK6", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] } ] }, { "uniprot_ac": "Q39027", "gene_name": "MPK7", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] } ] }, { "uniprot_ac": "Q39030", "gene_name": "ATPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] } ] }, { "uniprot_ac": "Q39050", "gene_name": "CKL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39050" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39050" } ] } ] }, { "uniprot_ac": "Q39086", "gene_name": "SD17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39086" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39086" } ] } ] }, { "uniprot_ac": "Q39183", "gene_name": "D6PKL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39183", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39183" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39183", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39183" } ] } ] }, { "uniprot_ac": "Q39191", "gene_name": "WAK1", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q39191", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39191" } ] } ] }, { "uniprot_ac": "Q39192", "gene_name": "SRK2D", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39192", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39192" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39192", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39192" } ] } ] }, { "uniprot_ac": "Q39193", "gene_name": "SRK2I", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39193", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39193" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39193", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39193" } ] } ] }, { "uniprot_ac": "Q39202", "gene_name": "RLK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39202", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39202" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39202", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39202" } ] } ] }, { "uniprot_ac": "Q39203", "gene_name": "SD22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39203", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39203" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39203", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39203" } ] } ] }, { "uniprot_ac": "Q39238", "gene_name": "TOUSLED", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39238" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39238" } ] } ] }, { "uniprot_ac": "Q3E884", "gene_name": "LECRK110", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E884", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E884" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E884", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E884" } ] } ] }, { "uniprot_ac": "Q3E8W4", "gene_name": "ANX2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E8W4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E8W4" } ] } ] }, { "uniprot_ac": "Q3E9C0", "gene_name": "CPK34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E9C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9C0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E9C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9C0" } ] } ] }, { "uniprot_ac": "Q3E9X6", "gene_name": "CRK21", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q3E9X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9X6" } ] } ] }, { "uniprot_ac": "Q3EBR4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3EBR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EBR4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3EBR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EBR4" } ] } ] }, { "uniprot_ac": "Q3ECH2", "gene_name": "LRK10L-2.8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3ECH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3ECH2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3ECH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3ECH2" } ] } ] }, { "uniprot_ac": "Q3EDL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] } ] }, { "uniprot_ac": "Q42371", "gene_name": "ERECTA", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] } ] }, { "uniprot_ac": "Q42396", "gene_name": "CPK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42396" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42396" } ] } ] }, { "uniprot_ac": "Q42438", "gene_name": "CPK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42438", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42438" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42438", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42438" } ] } ] }, { "uniprot_ac": "Q42479", "gene_name": "CPK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42479" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42479" } ] } ] }, { "uniprot_ac": "Q4V3C8", "gene_name": "PDPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q4V3C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4V3C8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q4V3C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4V3C8" } ] } ] }, { "uniprot_ac": "Q5HZ38", "gene_name": "GRIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5HZ38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5HZ38" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5HZ38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5HZ38" } ] } ] }, { "uniprot_ac": "Q5PP29", "gene_name": "PBL4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5PP29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5PP29" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5PP29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5PP29" } ] } ] }, { "uniprot_ac": "Q5XF24", "gene_name": "CKL13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5XF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF24" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5XF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF24" } ] } ] }, { "uniprot_ac": "Q5XF57", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5XF57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF57" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5XF57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF57" } ] } ] }, { "uniprot_ac": "Q5XF79", "gene_name": "PBL18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5XF79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF79" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5XF79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF79" } ] } ] }, { "uniprot_ac": "Q64FQ2", "gene_name": "PID2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q64FQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q64FQ2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q64FQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q64FQ2" } ] } ] }, { "uniprot_ac": "Q66GN2", "gene_name": "LECRK64", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q66GN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q66GN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q66GN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q66GN2" } ] } ] }, { "uniprot_ac": "Q683C9", "gene_name": "AUR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q683C9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q683C9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q683C9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q683C9" } ] } ] }, { "uniprot_ac": "Q6ICW6", "gene_name": "WNK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6ICW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6ICW6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6ICW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6ICW6" } ] } ] }, { "uniprot_ac": "Q6NKZ9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6NKZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKZ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6NKZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKZ9" } ] } ] }, { "uniprot_ac": "Q6NLQ6", "gene_name": "CPK32", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6NLQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLQ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6NLQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLQ6" } ] } ] }, { "uniprot_ac": "Q6NQ87", "gene_name": "CRK22", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q6NQ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NQ87" } ] } ] }, { "uniprot_ac": "Q6XAT2", "gene_name": "ERL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6XAT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6XAT2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6XAT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6XAT2" } ] } ] }, { "uniprot_ac": "Q7FK82", "gene_name": "LECRK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q7FK82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q7FK82" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q7FK82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q7FK82" } ] } ] }, { "uniprot_ac": "Q7X8C5", "gene_name": "WAKL2", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q7X8C5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q7X8C5" } ] } ] }, { "uniprot_ac": "Q7XJR9", "gene_name": "CPK16", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q7XJR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q7XJR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q7XJR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q7XJR9" } ] } ] }, { "uniprot_ac": "Q84JQ4", "gene_name": "PRK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84JQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84JQ4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84JQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84JQ4" } ] } ] }, { "uniprot_ac": "Q84M93", "gene_name": "MPK17", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] } ] }, { "uniprot_ac": "Q84M95", "gene_name": "PBL28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] } ] }, { "uniprot_ac": "Q84TI6", "gene_name": "CDKE-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GUH1" } ] } ] }, { "uniprot_ac": "Q8GWJ7", "gene_name": "CRK19", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GWJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GWJ7" } ] } ] }, { "uniprot_ac": "Q8GX23", "gene_name": "PERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] } ] }, { "uniprot_ac": "Q8GXQ3", "gene_name": "WAKL6", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GXQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXQ3" } ] } ] }, { "uniprot_ac": 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"id": "Q8GYA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYA4" } ] } ] }, { "uniprot_ac": "Q8GYF5", "gene_name": "WAKL21", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GYF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYF5" } ] } ] }, { "uniprot_ac": "Q8GYQ5", "gene_name": "MPK12", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] } ] }, { "uniprot_ac": "Q8GZ99", "gene_name": "HPCA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GZ99", "database": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] } ] }, { "uniprot_ac": "Q8LG64", "gene_name": "CDKB2-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] } ] }, { "uniprot_ac": "Q8LPI7", "gene_name": "CKL4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] } ] }, { "uniprot_ac": "Q8LPJ1", "gene_name": "CKL6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] } ] }, { "uniprot_ac": "Q8LPS5", "gene_name": "SERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_ac": "Q8LST2", "gene_name": "WNK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] } ] }, { "uniprot_ac": "Q8RWC9", "gene_name": "CIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": 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"activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] } ] }, { "uniprot_ac": "Q8RWL2", "gene_name": "CPK29", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] } ] }, { "uniprot_ac": "Q8RWL6", "gene_name": "STY17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] } ] }, { "uniprot_ac": "Q8RWW0", "gene_name": "ALE2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] } ] }, { "uniprot_ac": "Q8RWX4", "gene_name": "KOC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWX4", "database": "UniProtKB", "url": 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"id": "Q8RX66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX66" } ] } ] }, { "uniprot_ac": "Q8RX80", "gene_name": "CRK18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RX80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX80" } ] } ] }, { "uniprot_ac": "Q8RXC8", "gene_name": "RBK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] } ] }, { "uniprot_ac": "Q8RXE5", "gene_name": "WNK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] } ] }, { "uniprot_ac": "Q8RXG3", "gene_name": "MKK5", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] } ] }, { "uniprot_ac": "Q8RXT4", "gene_name": "NEK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] } ] }, { "uniprot_ac": "Q8RY17", "gene_name": "WAKL22", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY17" } ] } ] }, { "uniprot_ac": "Q8RY65", "gene_name": "CIK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] } ] }, { "uniprot_ac": "Q8RY67", "gene_name": "WAKL14", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY67", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY67" } ] } ] }, { "uniprot_ac": "Q8S8S7", "gene_name": "PUB34", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] } ] }, { "uniprot_ac": "Q8S8Y8", "gene_name": "WNK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8S8Y8", "database": "UniProtKB", "url": 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{ "id": "Q8S9L6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S9L6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8S9L6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S9L6" } ] } ] }, { "uniprot_ac": "Q8VYA3", "gene_name": "WAKL10", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8VYA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYA3" } ] } ] }, { "uniprot_ac": "Q8VYG0", "gene_name": "LRK10L-1.3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VYG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYG0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VYG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYG0" } ] } ] }, { "uniprot_ac": "Q8VYK9", "gene_name": "CKL12", "activity": [ { 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] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VZF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZF4" } ] } ] }, { "uniprot_ac": "Q8VZG8", "gene_name": "MIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VZG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZG8" } ] } ] }, { "uniprot_ac": "Q8VZJ9", "gene_name": "CRCK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VZJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZJ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VZJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZJ9" } ] } ] }, { "uniprot_ac": "Q8W1D5", "gene_name": "CIPK25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W1D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W1D5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W1D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W1D5" } ] } ] }, { "uniprot_ac": "Q8W490", "gene_name": "PEPKR2", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8W490", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W490" } ] } ] }, { "uniprot_ac": "Q8W4G6", "gene_name": "CRK15", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8W4G6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4G6" } ] } ] }, { "uniprot_ac": "Q8W4I7", "gene_name": "CPK13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4I7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W4I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4I7" } ] } ] }, { "uniprot_ac": "Q8W4J2", "gene_name": "MPK16", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4J2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4J2" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q8W4J2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4J2" } ] } ] }, { "uniprot_ac": "Q8W4L3", "gene_name": "BSK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4L3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W4L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4L3" } ] } ] }, { "uniprot_ac": "Q8W4P1", "gene_name": "CDKC-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] } ] }, { "uniprot_ac": "Q8W4S5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_ac": "Q93V58", "gene_name": "GRIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93V58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93V58" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93V58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93V58" } ] } ] }, { "uniprot_ac": "Q93VD3", "gene_name": "CIPK23", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93VD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VD3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93VD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VD3" } ] } ] }, { "uniprot_ac": "Q93VJ2", "gene_name": "IRE1B", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93VJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VJ2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93VJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VJ2" } ] }, { "ec_number": "3.1.26.-", "activity": "", "evidence": [ { "id": "Q93VJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VJ2" } ] } ] }, { "uniprot_ac": "Q93VK0", "gene_name": "PPCK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93VK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VK0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93VK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VK0" } ] } ] }, { "uniprot_ac": "Q93Y08", "gene_name": "ABC1K8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Y08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Y08" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Y08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Y08" } ] } ] }, { "uniprot_ac": "Q93YN1", "gene_name": "CRPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93YN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93YN1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93YN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93YN1" } ] } ] }, { "uniprot_ac": "Q93Z18", "gene_name": "CKL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Z18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z18" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Z18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z18" } ] } ] }, { "uniprot_ac": "Q93Z30", "gene_name": "BHP", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Z30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z30" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Z30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z30" } ] } ] }, { "uniprot_ac": "Q93ZS4", "gene_name": "CIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_ac": "Q940A2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "3.1.3.16", "activity": "O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate.", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "3.1.3.16", "activity": "", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] } ] }, { "uniprot_ac": "Q940H6", "gene_name": "SRK2E", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q940H6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940H6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q940H6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940H6" } ] } ] }, { "uniprot_ac": "Q944A7", 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O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94A06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94A06" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q94A06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94A06" } ] } ] }, { "uniprot_ac": "Q94AG2", "gene_name": "SERK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] } ] }, { "uniprot_ac": "Q94C25", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94C25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C25" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94C25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C25" } ] } ] }, { "uniprot_ac": "Q94C40", "gene_name": "CIPK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94C40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C40" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94C40", "database": "UniProtKB", "url": 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FF31" } ] } ] }, { "uniprot_ac": "Q9FFH8", "gene_name": "CKL7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFH8" } ] } ] }, { "uniprot_ac": "Q9FFP9", "gene_name": "SRK2H", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FFP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FFP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFP9" } ] } ] }, { "uniprot_ac": "Q9FFW5", "gene_name": "PERK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FFW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFW5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FFW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FFW5" } ] } ] }, { "uniprot_ac": "Q9FG33", "gene_name": "LECRKS5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FG33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FG33" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FG33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FG33" } ] } ] }, { "uniprot_ac": "Q9FG74", "gene_name": "D6PK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FG74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FG74" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FG74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FG74" } ] } ] }, { "uniprot_ac": "Q9FGB1", "gene_name": "CBC2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGB1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGB1" } ] } ] }, { "uniprot_ac": "Q9FGC3", "gene_name": "MEE13.6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGC3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FGC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGC3" } ] } ] }, { "uniprot_ac": "Q9FGW5", "gene_name": "CDKG1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGW5" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9FGW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGW5" } ] } ] }, { "uniprot_ac": "Q9FHD7", "gene_name": "BSK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHD7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHD7" } ] } ] }, { "uniprot_ac": "Q9FHG4", "gene_name": "LECRKS7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHG4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHG4" } ] } ] }, { "uniprot_ac": "Q9FHT0", "gene_name": "MNJ8.10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHT0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHT0" } ] } ] }, { "uniprot_ac": "Q9FHX3", "gene_name": "LECRKS6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHX3" } ] } ] }, { "uniprot_ac": "Q9FIF0", "gene_name": "LECRK22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF0" } ] } ] }, { "uniprot_ac": "Q9FIF1", "gene_name": "LECRK21", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF1" } ] } ] }, { "uniprot_ac": "Q9FII5", "gene_name": "TDR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FII5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FII5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FII5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FII5" } ] } ] }, { "uniprot_ac": "Q9FIJ6", "gene_name": "CCR4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] } ] }, { "uniprot_ac": "Q9FIL1", "gene_name": "BSK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] } ] }, { "uniprot_ac": "Q9FIL7", "gene_name": "CRCK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL7" } ] } ] }, { "uniprot_ac": "Q9FIM9", "gene_name": "CRK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIM9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIM9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIM9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIM9" } ] } ] }, { "uniprot_ac": "Q9FIU5", "gene_name": "CRLK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIU5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIU5" } ] } ] }, { "uniprot_ac": "Q9FIZ3", "gene_name": "GSO2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] } ] }, { "uniprot_ac": "Q9FJ54", "gene_name": "CIPK20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] } ] }, { "uniprot_ac": "Q9FJ55", "gene_name": "CIPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] } ] }, { "uniprot_ac": "Q9FJI4", "gene_name": "LECRK111", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] } ] }, { "uniprot_ac": "Q9FJV0", "gene_name": "MKK6", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] } ] }, { "uniprot_ac": "Q9FK63", "gene_name": "CAMRLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] } ] }, { "uniprot_ac": "Q9FKG5", "gene_name": "PUB51", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] } ] }, { "uniprot_ac": "Q9FKG6", "gene_name": "PUB52", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] } ] }, { "uniprot_ac": "Q9FKS4", "gene_name": "ATR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] } ] }, { "uniprot_ac": "Q9FKW4", "gene_name": "CPK28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] } ] }, { "uniprot_ac": "Q9FL28", "gene_name": "FLS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] } ] }, { "uniprot_ac": "Q9FLV4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] } ] }, { "uniprot_ac": "Q9FLZ3", "gene_name": "KIN12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] } ] }, { "uniprot_ac": "Q9FM85", "gene_name": "PBL16", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] } ] }, { "uniprot_ac": "Q9FMP5", "gene_name": "CPK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] } ] }, { "uniprot_ac": "Q9FMY3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] } ] }, { "uniprot_ac": "Q9FN37", "gene_name": "PSKR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] } ] }, { "uniprot_ac": "Q9FN93", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] } ] }, { "uniprot_ac": "Q9FN94", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] } ] }, { "uniprot_ac": "Q9FNE1", "gene_name": "CRK42", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] } ] }, { "uniprot_ac": "Q9FPR3", "gene_name": "EDR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] } ] }, { "uniprot_ac": "Q9FR53", "gene_name": "TOR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] } ] }, { "uniprot_ac": "Q9FRS6", "gene_name": "PXL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] } ] }, { "uniprot_ac": "Q9FVS6", "gene_name": "ASK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] } ] }, { "uniprot_ac": "Q9FX43", "gene_name": "MKK9", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] } ] }, { "uniprot_ac": "Q9FX86", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] } ] }, { "uniprot_ac": "Q9FX99", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] } ] }, { "uniprot_ac": "Q9FXF2", "gene_name": "RKF1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] } ] }, { "uniprot_ac": "Q9FY48", "gene_name": "KEG", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] } ] }, { "uniprot_ac": "Q9FYC5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYC5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYC5" } ] } ] }, { "uniprot_ac": "Q9FYK0", "gene_name": "TMK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FYK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYK0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FYK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYK0" } ] } ] }, { "uniprot_ac": "Q9FZ36", "gene_name": "ANP2", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZ36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ36" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q9FZ36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ36" } ] } ] }, { "uniprot_ac": "Q9FZ59", "gene_name": "PEPR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] } ] }, { "uniprot_ac": "Q9FZB1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] } ] }, { "uniprot_ac": "Q9FZB8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] } ] }, { "uniprot_ac": "Q9LDI3", "gene_name": "CIPK24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] } ] }, { "uniprot_ac": "Q9LDM5", "gene_name": "CRK31", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDM5" } ] } ] }, { "uniprot_ac": "Q9LDN1", "gene_name": "CRK33", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN1" } ] } ] }, { "uniprot_ac": "Q9LDN6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] } ] }, { "uniprot_ac": "Q9LDQ1", "gene_name": "PEPKR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] } ] }, { "uniprot_ac": "Q9LDQ3", "gene_name": "CRK34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] } ] }, { "uniprot_ac": "Q9LDS6", "gene_name": "CRK32", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDS6" } ] } ] }, { "uniprot_ac": "Q9LDT0", "gene_name": "CRK30", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDT0" } ] } ] }, { "uniprot_ac": "Q9LDZ5", "gene_name": "PBL21", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDZ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDZ5" } ] } ] }, { "uniprot_ac": "Q9LE81", "gene_name": "IRE", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] } ] }, { "uniprot_ac": "Q9LEA3", "gene_name": "LECRK56", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] } ] }, { "uniprot_ac": "Q9LET1", "gene_name": "CRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] } ] }, { "uniprot_ac": "Q9LEU7", "gene_name": "CIPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] } ] }, { "uniprot_ac": "Q9LFA2", "gene_name": "KIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFA2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFA2" } ] } ] }, { "uniprot_ac": "Q9LFD0", "gene_name": "BSK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFD0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ 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"https://www.uniprot.org/uniprotkb/Q9LQM8" } ] } ] }, { "uniprot_ac": "Q9LQQ8", "gene_name": "PBL5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] } ] }, { "uniprot_ac": "Q9LQQ9", "gene_name": "MPK13", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] } ] }, { "uniprot_ac": "Q9LRP3", "gene_name": "", 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+ ADP + H(+).", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] } ] }, { "uniprot_ac": "Q9LS95", "gene_name": "PERK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] } ] }, { "uniprot_ac": "Q9LSE1", "gene_name": "CDG1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] } ] }, { "uniprot_ac": "Q9LSF1", "gene_name": "OXI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] } ] }, { "uniprot_ac": "Q9LSL5", "gene_name": "LECRK92", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] } ] }, { "uniprot_ac": "Q9LSR8", "gene_name": "LECRK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] } ] }, { "uniprot_ac": "Q9LSR9", "gene_name": "LECRK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] } ] 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"", "evidence": [ { "id": "Q9LSX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSX4" } ] } ] }, { "uniprot_ac": "Q9LT35", "gene_name": "NEK6", "activity": [ { "ec_number": "2.7.11.34", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] }, { "ec_number": "2.7.11.34", "activity": "", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] } ] }, { "uniprot_ac": "Q9LT38", "gene_name": "UCNL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] } ] }, { "uniprot_ac": "Q9LT96", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] } ] }, { "uniprot_ac": "Q9LTC0", "gene_name": "PBL19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] } ] }, { "uniprot_ac": "Q9LTW5", "gene_name": "AGC1-5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LTW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTW5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LTW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTW5" } ] } ] }, { "uniprot_ac": "Q9LU47", "gene_name": "PUB53", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] } ] }, { "uniprot_ac": "Q9LUC3", "gene_name": "MPK19", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUC3" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LUC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUC3" } ] } ] }, { "uniprot_ac": "Q9LUI6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6" } ] } ] }, { "uniprot_ac": "Q9LUK3", "gene_name": "PAXL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] } ] }, { "uniprot_ac": "Q9LUL2", "gene_name": "WAG2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] } ] }, { "uniprot_ac": "Q9LUT0", "gene_name": "CARK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUT0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUT0" } ] } ] }, { "uniprot_ac": "Q9LV37", "gene_name": "MPK9", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV37" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV37" } ] } ] }, { "uniprot_ac": "Q9LV48", "gene_name": "PERK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LV48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV48" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LV48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV48" } ] } ] }, { "uniprot_ac": "Q9LVL5", "gene_name": "WNK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LVL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LVL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVL5" } ] } ] }, { "uniprot_ac": "Q9LVP0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LVP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVP0" } ] }, { "ec_number": 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} ] } ] }, { "uniprot_ac": "Q9SGN7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SGN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGN7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SGN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGN7" } ] } ] }, { "uniprot_ac": "Q9SGP2", "gene_name": "HSL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGP2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGP2" } ] } ] }, { "uniprot_ac": "Q9SGY7", "gene_name": "PERK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SGY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGY7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SGY7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGY7" } ] } ] }, { "uniprot_ac": "Q9SHI2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_ac": "Q9SHL5", "gene_name": "MJB20.9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SHL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SHL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHL5" } ] } ] }, { "uniprot_ac": "Q9SI06", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SI06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SI06" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SI06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SI06" } ] } ] }, { "uniprot_ac": "Q9SIB6", "gene_name": "PBL6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SIB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIB6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SIB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIB6" } ] } ] }, { "uniprot_ac": "Q9SII6", "gene_name": "PIX13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SII6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SII6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SII6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SII6" } ] } ] }, { "uniprot_ac": "Q9SIJ1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SIJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SIJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ1" } ] } ] }, { "uniprot_ac": "Q9SIQ7", "gene_name": "CPK24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SIQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIQ7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SIQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIQ7" } ] } ] }, { "uniprot_ac": "Q9SIT1", "gene_name": "TMK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SIT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SIT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIT1" } ] } ] }, { "uniprot_ac": "Q9SJ61", "gene_name": "CPK25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJ61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ61" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJ61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ61" } ] } ] }, { "uniprot_ac": "Q9SJG2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG2" } ] } ] }, { "uniprot_ac": "Q9SJG9", "gene_name": "MPK20", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG9" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9SJG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG9" } ] } ] }, { "uniprot_ac": "Q9SJM3", "gene_name": "KIPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJM3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJM3" } ] } ] }, { "uniprot_ac": "Q9SK34", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SK34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK34" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SK34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK34" } ] } ] }, { "uniprot_ac": "Q9SKB2", "gene_name": "SOBIR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] } ] }, { "uniprot_ac": "Q9SKG5", "gene_name": "SERK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] } ] }, { "uniprot_ac": "Q9SLI2", "gene_name": "NEK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SLI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SLI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLI2" } ] } ] }, { "uniprot_ac": "Q9SMQ4", "gene_name": "SRK2F", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SMQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SMQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ4" } ] } ] }, { "uniprot_ac": "Q9SN43", "gene_name": "CIPK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN43" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN43" } ] } ] }, { "uniprot_ac": "Q9SN80", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN80" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN80" } ] } ] }, { "uniprot_ac": "Q9SN97", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN97" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN97" } ] } ] }, { "uniprot_ac": "Q9SNA0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] } ] }, { "uniprot_ac": "Q9SNA3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA3" } ] } ] }, { "uniprot_ac": "Q9SND6", "gene_name": "MAPKKK20", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SND6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND6" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q9SND6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND6" } ] } ] }, { "uniprot_ac": "Q9SPK4", "gene_name": "PPCK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SPK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SPK4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SPK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SPK4" } ] } ] }, { "uniprot_ac": "Q9SR05", "gene_name": "ANX1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SR05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR05" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SR05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR05" } ] } ] }, { "uniprot_ac": "Q9SR87", "gene_name": "LECRK61", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SR87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR87" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SR87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR87" } ] } ] }, { "uniprot_ac": "Q9SRH7", "gene_name": "PBL35", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] } ] }, { "uniprot_ac": "Q9SSA4", "gene_name": "CBC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] } ] }, { "uniprot_ac": "Q9SSF8", "gene_name": "CPK30", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSF8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSF8" } ] } ] }, { "uniprot_ac": "Q9SSL9", "gene_name": "PEPR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSL9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSL9" } ] } ] }, { "uniprot_ac": "Q9STF0", "gene_name": "LECRKS3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF0" } ] } ] }, { "uniprot_ac": "Q9STJ8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STJ8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STJ8" } ] } ] }, { "uniprot_ac": "Q9STK6", "gene_name": "WNK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STK6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STK6" } ] } ] }, { "uniprot_ac": "Q9STV4", "gene_name": "CIPK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STV4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STV4" } ] } ] }, { "uniprot_ac": "Q9SUA3", "gene_name": "D6PKL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SUA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SUA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUA3" } ] } ] }, { "uniprot_ac": "Q9SUL7", "gene_name": "CIPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": 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F-box protein At3g17710 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LUM6-1" }, "isoforms": [ { "isoform_ac": "Q9LUM6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUM6/entry#Q9LUM6-1", "sequence": { "sequence": "MASVKLPWDLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLVRARPQFIFLTESKKMYSIEIDLGGTIEVREVPYDFHCQPMKKNFTTIMACDGLLFRDFWKQGVAVWNPWLRQVGWIEYEDKGFRFCGVGYDSCKPDKCYKILGYFNCTRRLSDSLQEGYYQAAIYECASQAFKFIDTPNPFNLWPNKDPLSVNGNLYWLAHNHPETLEYFIETFDFSMEIFKPFCLLPCRKDFGSNELVLAVFKEDRFSLLKQCFETTKIEIWVTKMKIDREEEVVWIKFMTLPTTNLPNLDDTYCCSSYFIFDKTIIMCCGDYKTGATCIYMVRGDMFKKIQINSGIFQFSYCVYLPNLISVPFESHQV", "length": 368, "header": "sp|Q9LUM6-1|FB157_ARATH Isoform 1 of F-box protein At3g17710 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LUM6-1" }, "locus": { "chromosome": "3", "start_pos": 6055495, "end_pos": 6056778, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G17710.1", "url": "https://www.ensemblgenomes.org/id/AT3G17710.1" }, { "database": "Ensembl 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Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LUM6", "url": "https://www.uniprot.org/uniprotkb/Q9LUM6" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q9LUM6", "url": "https://www.uniprot.org/uniprotkb/Q9LUM6" } ], "reference": 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"Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUV7", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7", "locus": {} } ], "crossref": [ { "id": "Q9LUV7", "url": "https://alphafold.ebi.ac.uk/entry/Q9LUV7", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G22421", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G22421", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821811", "url": "https://www.ncbi.nlm.nih.gov/gene/821811", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G22421", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G22421", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YWCAIRR", "url": "https://omabrowser.org/oma/group/YWCAIRR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LUV7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LUV7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_683583", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683583", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G22421", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G22421", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LUV7", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUV7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTMTTTISHLPTELLDEIISRVPLKSTRAVRLTCKNWDSLFKNRSFMKEEAAAKEGESRMIVLMDKNLFAMSIFFNGIDIDPSAEQRGKLTCLYDDSEQVKISQVFHCEGLLLCVLEDDKCSLVVWNPYWGQTRWIEPRYFSRIQNCYGRYMYVYALGYNNKSRSHKILRFIDGAFDFPFWYEIYDFDSDLWTTLDVTPQWFINFPPRGCYNRGVTLKGNTYWCAIRRKSNTNWFVDLDHIICFDFTSERFGPLMPLPFVRYTSGSLVTLSCVREEKLAVLFCNNATVEVWITTKIETDKISWSKFLTVNMYVDLLEGSFFIDEVKKVAMIFDIPMNRETVYIVGEAGNVKELHLGQPVDVDKHFSPLFVCSYVPSLVQIKQPPGCQRKQESSLEKRRCDDENISRLIAHEETYVVYGRYVPSRKKPR", "length": 428, "header": "sp|Q9LUV7-1|FB175_ARATH Isoform 1 of Putative F-box protein At3g22421 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUV7-1" }, "isoforms": [ { "isoform_ac": "Q9LUV7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7/entry#Q9LUV7-1", "sequence": { "sequence": "MTMTTTISHLPTELLDEIISRVPLKSTRAVRLTCKNWDSLFKNRSFMKEEAAAKEGESRMIVLMDKNLFAMSIFFNGIDIDPSAEQRGKLTCLYDDSEQVKISQVFHCEGLLLCVLEDDKCSLVVWNPYWGQTRWIEPRYFSRIQNCYGRYMYVYALGYNNKSRSHKILRFIDGAFDFPFWYEIYDFDSDLWTTLDVTPQWFINFPPRGCYNRGVTLKGNTYWCAIRRKSNTNWFVDLDHIICFDFTSERFGPLMPLPFVRYTSGSLVTLSCVREEKLAVLFCNNATVEVWITTKIETDKISWSKFLTVNMYVDLLEGSFFIDEVKKVAMIFDIPMNRETVYIVGEAGNVKELHLGQPVDVDKHFSPLFVCSYVPSLVQIKQPPGCQRKQESSLEKRRCDDENISRLIAHEETYVVYGRYVPSRKKPR", "length": 428, "header": "sp|Q9LUV7-1|FB175_ARATH Isoform 1 of Putative F-box protein At3g22421 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUV7-1" }, "locus": { "chromosome": "3", "start_pos": 7949106, "end_pos": 7950440, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G22421.1", "url": "https://www.ensemblgenomes.org/id/AT3G22421.1" }, { "database": "Ensembl Peptide", "id": "AT3G22421.1", "url": "https://www.ensemblgenomes.org/id/AT3G22421.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LUV7", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7" } ], "reference": [ { "type": "PubMed", "id": "10819329", "url": "https://glygen.org/publication/PubMed/10819329" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LUV7", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G22421", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G22421", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 161, "end_pos": 163, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 403, "end_pos": 405, "annotation": "n_glycosylation_sequon" }, { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LUV7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 428, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LUV7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LUV7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LUV7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUV7" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 4, "end_pos": 50, "start_aa": "Thr", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 161, "end_pos": 163 }, { "start_pos": 285, "end_pos": 287 }, { "start_pos": 403, "end_pos": 405 }, { "start_pos": 43, "end_pos": 45 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q6NKR8-1", "uniprot_ac": "Q6NKR8", "uniprot_id": "CORD1_ARATH", "mass": { "chemical_mass": 55600.0, "monoisotopic_mass": 55600.0 }, "refseq": { "ac": "NP_188033", "name": "hypothetical protein (DUF936)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188033" }, "gene_names": [ { "name": "CORD1", "type": "recommended", "evidence": [ { "id": "Q6NKR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ] } ], "protein_names": [ { "name": "Protein CORTICAL MICROTUBULE DISORDERING 1", "type": "recommended", "evidence": [ { "id": "Q6NKR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8/entry#names_and_taxonomy" } ] }, { "name": "AtCORD1", "type": "synonym", "evidence": [ { "id": "Q6NKR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8/entry#names_and_taxonomy" } ] }, { "name": "hypothetical protein (DUF936)", "type": "synonym", "evidence": [ { "id": "NP_188033", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188033" } ] } ], "function": [ { "annotation": "Microtubule-associated protein required, redundantly with CORD2, for the formation of the pitted secondary cell wall of metaxylem vessels (PubMed:29133465). Controls disorganization of the parallel cortical microtubule network by modulating microtubule attachment to the plasma membrane in metaxylem vessel cells; this mechanism probably relies on disruption of interactions between ARAC10/ROP11 and cortical microtubules (PubMed:29133465).", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8#function" }, { "database": "PubMed", "id": "29133465", "url": "https://glygen.org/publication/PubMed/29133465" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "CORD1", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8", "locus": {} } ], "crossref": [ { "id": "Q6NKR8", "url": "https://alphafold.ebi.ac.uk/entry/Q6NKR8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G14170", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G14170", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820634", "url": "https://www.ncbi.nlm.nih.gov/gene/820634", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048297", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048297", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G14170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G14170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YMQGVLT", "url": "https://omabrowser.org/oma/group/YMQGVLT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31928", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31928", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31928:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31928:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06075", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06075", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21647", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21647", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188033", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G14170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G14170", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LS40", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS40", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LS40-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS40-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6NKR8-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPALAGSELWPNQGFFIKVSDSSHSTYVSLSNEDNELILNNKLGIGQFFYVDKLDAGTPVPVLVGVRPISGRHPFVGNPKDLMQMLVPSETTPREEEYHNQKKKDGARSNIVENIRKHQPFVIKEEKTGVASRYMKGISNSKASGSDSSSGGSNNEGETGSIMVAKKVGVLAKGKQREHKDQARQAGPLQCRPATAPTKAEPKKLSLSSTVNYINRKSNSAEDASWSSLPVSLSKLGKGMLRRRNLAALIAAEVQREALAASHLIKCISMFAELSSNASPKNPHTSLRNFFTLQSILDQVQVTVVASKDKSFQPVNIHSLWMEPEKLSKKASLSSSRATMKPSKALTEAEKLEWVKGNGTEEIKELTNTLKRETRSWFLKFLEDALDTGLHATVPEKKGKTKGARLAEPDNHIAETLSQLKQANEWLEKVKNDNLSSDNSLLENIERLKKKIYSCLLLYVDSAASAIGV", "length": 505, "header": "sp|Q6NKR8-1|CORD1_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 1 OS=Arabidopsis thaliana OX=3702 GN=CORD1 PE=2 SV=1 CANONICAL=Q6NKR8-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LS40-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8/entry#A0A1I9LS40-1", "sequence": { "sequence": "MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPALAGSELWPNQGFFIKVSDSSHSTYVSLSNEDNELILNNKLGIGQFFYVDKLDAGTPVPVLVGVRPISGRHPFVGNPKDLMQMLVPSETTPREEEYHNQKKQKDGARSNIVENIRKHQPFVIKEEKTGVASRYMKGISNSKASGSDSSSGGSNNEGETGSIMVAKKVGVLAKGKQREHKDQARQAGPLQCRPATAPTKAEPKKLSLSSTVNYINRKSNSAEDASWSSLPVSLSKLGKGMLRRRNLAALIAAEVQREALAASHLIKCISMFAELSSNASPKNPHTSLRNFFTLQSILDQVQVTVVASKDKSFQPVNIHSLWMEPEKLSKKASLSSSRATMKPSKALTEAEKLEWVKGNGTEEIKELTNTLKRETRSWFLKFLEDALDTGLHATVPEKKGKTKGARLAEPDNHIAETLSQLKQANEWLEKVKNDNLSSDNSLLENIERLKKKIYSCLLLYVDSAASAIGV", "length": 506, "header": "tr|A0A1I9LS40-1|A0A1I9LS40_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=CORD1 PE=1 SV=1 CANONICAL=Q6NKR8-1" }, "locus": { "chromosome": "3", "start_pos": 4695886, "end_pos": 4698141, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G14170.2", "url": "https://www.ensemblgenomes.org/id/AT3G14170.2" }, { "database": "Ensembl Peptide", "id": "AT3G14170.2", "url": "https://www.ensemblgenomes.org/id/AT3G14170.2" } ] } }, { "isoform_ac": "Q6NKR8-1", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8/entry#Q6NKR8-1", "sequence": { "sequence": "MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPALAGSELWPNQGFFIKVSDSSHSTYVSLSNEDNELILNNKLGIGQFFYVDKLDAGTPVPVLVGVRPISGRHPFVGNPKDLMQMLVPSETTPREEEYHNQKKKDGARSNIVENIRKHQPFVIKEEKTGVASRYMKGISNSKASGSDSSSGGSNNEGETGSIMVAKKVGVLAKGKQREHKDQARQAGPLQCRPATAPTKAEPKKLSLSSTVNYINRKSNSAEDASWSSLPVSLSKLGKGMLRRRNLAALIAAEVQREALAASHLIKCISMFAELSSNASPKNPHTSLRNFFTLQSILDQVQVTVVASKDKSFQPVNIHSLWMEPEKLSKKASLSSSRATMKPSKALTEAEKLEWVKGNGTEEIKELTNTLKRETRSWFLKFLEDALDTGLHATVPEKKGKTKGARLAEPDNHIAETLSQLKQANEWLEKVKNDNLSSDNSLLENIERLKKKIYSCLLLYVDSAASAIGV", "length": 505, "header": "sp|Q6NKR8-1|CORD1_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 1 OS=Arabidopsis thaliana OX=3702 GN=CORD1 PE=2 SV=1 CANONICAL=Q6NKR8-1" }, "locus": { "chromosome": "3", "start_pos": 4695931, "end_pos": 4698153, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G14170.1", "url": "https://www.ensemblgenomes.org/id/AT3G14170.1" }, { "database": "Ensembl Peptide", "id": "AT3G14170.1", "url": "https://www.ensemblgenomes.org/id/AT3G14170.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 180, "end_pos": 180, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q6NKR8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6NKR8" } ], "site_lbl": "Ser180" }, { "start_pos": 182, "end_pos": 182, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q6NKR8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6NKR8" } ], "site_lbl": "Ser182" }, { "start_pos": 184, "end_pos": 184, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q6NKR8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6NKR8" } ], "site_lbl": "Ser184" }, { "start_pos": 185, "end_pos": 185, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q6NKR8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6NKR8" } ], "site_lbl": "Ser185" }, { "start_pos": 195, "end_pos": 195, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q6NKR8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6NKR8" } ], "site_lbl": "Thr195" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Kaneko T, Katoh T, Sato S, Nakamura A, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "reference": [ { "type": "PubMed", "id": "10907853", "url": "https://glygen.org/publication/PubMed/10907853" } ] }, { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS40", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS40" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "CORTICAL MICROTUBULE DISORDERING1 Is Required for Secondary Cell Wall Patterning in Xylem Vessels.", "journal": "The Plant cell", "date": "2017-12", "authors": "Sasaki Takema, Fukuda Hiroo, Oda Yoshihisa", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "reference": [ { "type": "PubMed", "id": "29133465", "url": "https://glygen.org/publication/PubMed/29133465" } ] } ], "pathway": [ { "id": "ath:AT3G14170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G14170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "pmid": "" }, { "name": "xylem and phloem pattern formation", "id": "GO:0010051", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010051", "evidence": [ { "database": "UniProtKB", "id": "Q6NKR8", "url": "https://www.uniprot.org/uniprotkb/Q6NKR8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 313, "end_pos": 315, "annotation": "n_glycosylation_sequon" }, { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" }, { "start_pos": 470, "end_pos": 472, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q6NKR8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 505, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q6NKR8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q6NKR8" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 180, 182, 184, 185, 195 ], "sequon_annotation_sites": [ { "start_pos": 313, "end_pos": 315 }, { "start_pos": 394, "end_pos": 396 }, { "start_pos": 470, "end_pos": 472 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 5 }, { "field": "total_sites", "count": 5 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LTZ4-1", "uniprot_ac": "Q9LTZ4", "uniprot_id": "Q9LTZ4_ARATH", "mass": { "chemical_mass": 31688.0, "monoisotopic_mass": 31688.0 }, "refseq": { "ac": "NP_566816", "name": "transcriptional regulator ATRX-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566816" }, "gene_names": [], "protein_names": [ { "name": "Transcriptional regulator ATRX-like protein", "type": "synonym", "evidence": [ { "id": "Q9LTZ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4/entry#names_and_taxonomy" } ] }, { "name": "transcriptional regulator ATRX-like protein", "type": "synonym", "evidence": [ { "id": "NP_566816", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566816" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4", "locus": {} } ], "crossref": [ { "id": "AT3G27350", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G27350", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822356", "url": "https://www.ncbi.nlm.nih.gov/gene/822356", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LTZ4", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LTZ4*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR044216", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044216", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G27350", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27350", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR47067", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47067", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47067:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47067:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_566816", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566816", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G27350", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G27350", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4IWH1", "url": "https://www.uniprot.org/uniprotkb/F4IWH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IWH1-1", "url": "https://www.uniprot.org/uniprotkb/F4IWH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IWH3", "url": "https://www.uniprot.org/uniprotkb/F4IWH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IWH3-1", "url": "https://www.uniprot.org/uniprotkb/F4IWH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LTZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGESAVLVHSYSFAAPITRNDSHEENTIHALSQSISFGKFMTENLEWGKWSSFSHKKYVEEAEKYSRPGSVAQKKAFFEAHYKRIAEAKKAATEEQPSVTPAEVLLHTLETQPPPPPPPLVLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQHRKSVTKNRPVFRLSLEKTIPPKSLDEISLTEKRSERPMTQVEEKPVHRQRFGLLSCFISNAKTQDQNQSRNKRKTEKKKQFLCLCLKPKTIRE", "length": 274, "header": "tr|Q9LTZ4-1|Q9LTZ4_ARATH Isoform 1 of Transcriptional regulator ATRX-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTZ4-1" }, "isoforms": [ { "isoform_ac": "F4IWH1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4/entry#F4IWH1-1", "sequence": { "sequence": "MGESAVLVHSYSFAAPITRNDSHEENTIHALSQSISFGKFMTENLEWGKWSSFSHKKYVEEAEKYSRPGSVAQKKAFFEAHYKRIAEAKKAATEEQPSVTPAEVLLHTLETQPPPPPPPLVLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQHRKSVTKNRPVFRLSLEKTIPPKSLDEISLTEKRSERPMTQVEEKPVHRQRFGLLSCFISNAKTQDQNQSRNKRKTEKKKQFLCLCLKPKTIREWHRLCSIHTSLEKSPSAIGISFFCLVLFESLLSVLLCNERTTPVS", "length": 319, "header": "tr|F4IWH1-1|F4IWH1_ARATH Computationally mapped isoform of Transcriptional regulator ATRX-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTZ4-1" }, "locus": { "chromosome": "3", "start_pos": 10125659, "end_pos": 10127992, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27350.2", "url": "https://www.ensemblgenomes.org/id/AT3G27350.2" }, { "database": "Ensembl Peptide", "id": "AT3G27350.2", "url": "https://www.ensemblgenomes.org/id/AT3G27350.2" } ] } }, { "isoform_ac": "F4IWH3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4/entry#F4IWH3-1", "sequence": { "sequence": "MTENLEWGKWSSFSHKKYVEEAEKYSRPGSVAQKKAFFEAHYKRIAEAKKAATEEQPSVTPAEVLLHTLETQPPPPPPPLVLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQHRKSVTKNRPVFRLSLEKTIPPKSLDEISLTEKRSERPMTQVEEKPVHRQRFGLLSCFISNAKTQDQNQSRNKRKTEKKKQFLCLCLKPKTIREWHRLCSIHTSLEKSPSAIGISFFCLVLFESLLSVLLCNERTTPVS", "length": 279, "header": "tr|F4IWH3-1|F4IWH3_ARATH Computationally mapped isoform of Transcriptional regulator ATRX-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTZ4-1" }, "locus": { "chromosome": "3", "start_pos": 10125659, "end_pos": 10127992, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27350.3", "url": "https://www.ensemblgenomes.org/id/AT3G27350.3" }, { "database": "Ensembl Peptide", "id": "AT3G27350.3", "url": "https://www.ensemblgenomes.org/id/AT3G27350.3" } ] } }, { "isoform_ac": "Q9LTZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4/entry#Q9LTZ4-1", "sequence": { "sequence": "MGESAVLVHSYSFAAPITRNDSHEENTIHALSQSISFGKFMTENLEWGKWSSFSHKKYVEEAEKYSRPGSVAQKKAFFEAHYKRIAEAKKAATEEQPSVTPAEVLLHTLETQPPPPPPPLVLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQHRKSVTKNRPVFRLSLEKTIPPKSLDEISLTEKRSERPMTQVEEKPVHRQRFGLLSCFISNAKTQDQNQSRNKRKTEKKKQFLCLCLKPKTIRE", "length": 274, "header": "tr|Q9LTZ4-1|Q9LTZ4_ARATH Isoform 1 of Transcriptional regulator ATRX-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LTZ4-1" }, "locus": { "chromosome": "3", "start_pos": 10125850, "end_pos": 10128756, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G27350.1", "url": "https://www.ensemblgenomes.org/id/AT3G27350.1" }, { "database": "Ensembl Peptide", "id": "AT3G27350.1", "url": "https://www.ensemblgenomes.org/id/AT3G27350.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 100, "start_aa": "Thr", "end_pos": 100, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr100", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 18, "end_pos": 18, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr18" }, { "start_pos": 209, "end_pos": 209, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser209" }, { "start_pos": 32, "end_pos": 32, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser32" }, { "start_pos": 34, "end_pos": 34, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser34" }, { "start_pos": 36, "end_pos": 36, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser36" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LTZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LTZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LTZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTZ4" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G27350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G27350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LTZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LTZ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 20, "end_pos": 22, "annotation": "n_glycosylation_sequon" }, { "start_pos": 248, "end_pos": 250, "annotation": "n_glycosylation_sequon" } ], 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GN= PE=1 SV=1 CANONICAL=Q9M097-1" }, "locus": { "chromosome": "4", "start_pos": 14950320, "end_pos": 14952446, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G30630.1", "url": "https://www.ensemblgenomes.org/id/AT4G30630.1" }, { "database": "Ensembl Peptide", "id": "AT4G30630.1", "url": "https://www.ensemblgenomes.org/id/AT4G30630.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, 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"database": "Ensembl Peptide", "id": "AT4G01650.3", "url": "https://www.ensemblgenomes.org/id/AT4G01650.3" } ] } }, { "isoform_ac": "Q9M120-1", "url": "https://www.uniprot.org/uniprotkb/Q9M120/entry#Q9M120-1", "sequence": { "sequence": "MQSSPILLDFSSAFHHPRAAALATTSGLTNSHSPTKKYRLITSFSPSSTLLASSRRCFTCRFGDSSPRFNSNEDETETETDDEDDYCLTDGKTEELVVGDDGVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNLMSIRDAAQKVIEGVIHDL", "length": 288, "header": "tr|Q9M120-1|Q9M120_ARATH Isoform 1 of Polyketide cyclase / dehydrase and lipid transport protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M120-1" }, "locus": { "chromosome": "4", "start_pos": 704377, "end_pos": 706077, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01650.1", "url": "https://www.ensemblgenomes.org/id/AT4G01650.1" }, { "database": "Ensembl Peptide", "id": "AT4G01650.1", "url": 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Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B4E3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4E3" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B4E3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4E3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G01650", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G01650", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": 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"PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06219", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06219", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G29310", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29310", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B4T8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4T8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B4T8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4T8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0F0", "url": "https://www.uniprot.org/uniprotkb/Q9M0F0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0F0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0F0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"end_pos": 10, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" } ], "site_lbl": "Thr10" }, { "start_pos": 127, "end_pos": 127, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" } ], "site_lbl": "Ser127" }, { "start_pos": 147, "end_pos": 147, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" } ], "site_lbl": "Ser147" }, { "start_pos": 202, "end_pos": 202, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser202" }, { "start_pos": 210, "end_pos": 210, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser210" }, { "start_pos": 220, "end_pos": 220, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0F0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0F0" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": 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Classification" ] }, { "id": "IPR044861", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044861", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050295", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050295", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G25310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KSDIQDH", "url": "https://omabrowser.org/oma/group/KSDIQDH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47991", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47991", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03171", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03171", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G25310", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G25310", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B881", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B881", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B881-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B881-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SB32", "url": "https://www.uniprot.org/uniprotkb/Q9SB32", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SB32-1", "url": "https://www.uniprot.org/uniprotkb/Q9SB32-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGKGVTFSSVIVPSVQEMVKEKVITTVLPPRYVRSDQEKGEAAIDSGENQIPIIDMSLLSSSTSMDSEIDKLDFACKEWGFFQLVNHGMDLDKFKSDIQDFFNLPMEEKKKLWQQPGDIEGFGQAFVFSEEQKLDWADVFFLTMQPVPLRKPHLFPKLPLPFRDTLDTYSAELKSIAKVLFAKLASALKIKPEEMEKLFDDELGQRIRMNYYPPCPEPDKAIGLTPHSDATGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVASFHNTGFGKEIGPMRSLVERHKGALFKTLTTEEYFHGLFSRELDGKAYLDVMRI", "length": 353, "header": "tr|Q9SB32-1|Q9SB32_ARATH Isoform 1 of 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SB32-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B881-1", "url": "https://www.uniprot.org/uniprotkb/Q9SB32/entry#A0A1P8B881-1", "sequence": { "sequence": "MEGKGVTFSSVIVPSVQEMVKEKVITTVLPPRYVRSDQEKGEAAIDSGENQIPIIDMSLLSSSTSMDSEIDKLDFACKEWGFFQLVNHGMDLDKFKSDIQDFFNLPMEEKKKLWQQPGDIEGFGQAFVFSEEQKLDWADVFFLTMQPVPLRKPHLFPKLPLPFRDTLDTYSAELKSIAKVLFAKLASALKIKPEEMEKLFDDELGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVASFHNTGFGKEIGPMRSLVERHKGALFKTLTTEEYFHGLFSRELDGKAYLDVMRI", "length": 325, "header": "tr|A0A1P8B881-1|Q9SB32_ARATH Computationally mapped isoform of 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SB32-1" }, "locus": { "chromosome": "4", "start_pos": 12949664, "end_pos": 12951359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25310.2", "url": "https://www.ensemblgenomes.org/id/AT4G25310.2" }, { "database": "Ensembl Peptide", "id": "AT4G25310.2", "url": "https://www.ensemblgenomes.org/id/AT4G25310.2" } ] } }, { "isoform_ac": "Q9SB32-1", "url": "https://www.uniprot.org/uniprotkb/Q9SB32/entry#Q9SB32-1", "sequence": { "sequence": "MEGKGVTFSSVIVPSVQEMVKEKVITTVLPPRYVRSDQEKGEAAIDSGENQIPIIDMSLLSSSTSMDSEIDKLDFACKEWGFFQLVNHGMDLDKFKSDIQDFFNLPMEEKKKLWQQPGDIEGFGQAFVFSEEQKLDWADVFFLTMQPVPLRKPHLFPKLPLPFRDTLDTYSAELKSIAKVLFAKLASALKIKPEEMEKLFDDELGQRIRMNYYPPCPEPDKAIGLTPHSDATGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVASFHNTGFGKEIGPMRSLVERHKGALFKTLTTEEYFHGLFSRELDGKAYLDVMRI", "length": 353, "header": "tr|Q9SB32-1|Q9SB32_ARATH Isoform 1 of 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SB32-1" }, "locus": { "chromosome": "4", "start_pos": 12949664, "end_pos": 12951937, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25310.1", "url": "https://www.ensemblgenomes.org/id/AT4G25310.1" }, { "database": "Ensembl Peptide", "id": "AT4G25310.1", "url": "https://www.ensemblgenomes.org/id/AT4G25310.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De 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"MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEYVVQTLTPLHHNPKTPTTRKKKHDTNALHGSWERTNT", "length": 1091, "header": "tr|A0A1P8B9R9-1|A0A1P8B9R9_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686771, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.7", "url": "https://www.ensemblgenomes.org/id/AT5G58610.7" }, { "database": "Ensembl Peptide", "id": "AT5G58610.7", "url": "https://www.ensemblgenomes.org/id/AT5G58610.7" } ] } }, { "isoform_ac": "A0A1P8B9T1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T1-1", "sequence": { "sequence": "MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEESLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEEIKTQEERLLIKKENRIVKFYSRRRSKCMRLT", "length": 1060, "header": "tr|A0A1P8B9T1-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686295, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.6", "url": "https://www.ensemblgenomes.org/id/AT5G58610.6" }, { "database": "Ensembl Peptide", "id": "AT5G58610.6", "url": "https://www.ensemblgenomes.org/id/AT5G58610.6" } ] } }, { "isoform_ac": "A0A1P8B9T2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T2-1", "sequence": { "sequence": "MPAAEEEEPIFGWNSTGRRNLRRKKLLDGDKIEVRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIG", "length": 1021, "header": "tr|A0A1P8B9T2-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686079, "end_pos": 23691394, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.2", "url": "https://www.ensemblgenomes.org/id/AT5G58610.2" }, { "database": "Ensembl Peptide", "id": "AT5G58610.2", "url": "https://www.ensemblgenomes.org/id/AT5G58610.2" } ] } }, { "isoform_ac": "A0A1P8B9T3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T3-1", "sequence": { "sequence": "MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEEIKTQEERLLIKKENRIVKFYSRRRSKCMRLT", "length": 1086, "header": "tr|A0A1P8B9T3-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686183, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.5", "url": "https://www.ensemblgenomes.org/id/AT5G58610.5" }, { "database": "Ensembl Peptide", "id": "AT5G58610.5", "url": "https://www.ensemblgenomes.org/id/AT5G58610.5" } ] } }, { "isoform_ac": "A0A1P8B9T4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T4-1", "sequence": { "sequence": "MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVFSLLLKT", "length": 950, "header": "tr|A0A1P8B9T4-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23687407, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.9", "url": "https://www.ensemblgenomes.org/id/AT5G58610.9" }, { "database": "Ensembl Peptide", "id": "AT5G58610.9", "url": "https://www.ensemblgenomes.org/id/AT5G58610.9" } ] } }, { "isoform_ac": "A0A1P8B9T6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T6-1", "sequence": { "sequence": "MPAAEEEEPIFGWNSTGRRNLRRKKLLDGDKIEVRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVFSLLLKT", "length": 959, "header": "tr|A0A1P8B9T6-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23687425, "end_pos": 23691394, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.10", "url": "https://www.ensemblgenomes.org/id/AT5G58610.10" }, { "database": "Ensembl Peptide", "id": "AT5G58610.10", "url": "https://www.ensemblgenomes.org/id/AT5G58610.10" } ] } }, { "isoform_ac": "A0A1P8B9T7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9T7-1", "sequence": { "sequence": "MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVR", "length": 909, "header": "tr|A0A1P8B9T7-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23687589, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.11", "url": "https://www.ensemblgenomes.org/id/AT5G58610.11" }, { "database": "Ensembl Peptide", "id": "AT5G58610.11", "url": "https://www.ensemblgenomes.org/id/AT5G58610.11" } ] } }, { "isoform_ac": "A0A1P8B9U2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#A0A1P8B9U2-1", "sequence": { "sequence": "MLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEEIKTQEERLLIKKENRIVKFYSRRRSKCMRLT", "length": 864, "header": "tr|A0A1P8B9U2-1|Q9LUZ5_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686079, "end_pos": 23691394, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.4", "url": "https://www.ensemblgenomes.org/id/AT5G58610.4" }, { "database": "Ensembl Peptide", "id": "AT5G58610.4", "url": "https://www.ensemblgenomes.org/id/AT5G58610.4" } ] } }, { "isoform_ac": "F4KGA3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#F4KGA3-1", "sequence": { "sequence": "MGLFDCRVYRVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEESLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEYVVQTLTPLHHNPKTPTTRKKKHDTNALHGSWERTNT", "length": 1065, "header": "tr|F4KGA3-1|F4KGA3_ARATH Computationally mapped isoform of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686771, "end_pos": 23691053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.1", "url": "https://www.ensemblgenomes.org/id/AT5G58610.1" }, { "database": "Ensembl Peptide", "id": "AT5G58610.1", "url": "https://www.ensemblgenomes.org/id/AT5G58610.1" } ] } }, { "isoform_ac": "Q9LUZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5/entry#Q9LUZ5-1", "sequence": { "sequence": "MPAAEEEEPIFGWNSTGRRNLRRKKLLDGDKIEVRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDWNEATETWECRGSWLFLDLIEIYKEYNYLPVSVKQLWYDIRDRIGFVRIQEWTCSTKHLWQDLMLGVIEDNLKITIDQFLHDFDAERYPQLKLLNEASQAVYETNACLSGMLTIAPQEHQFSCIDKDFKPASQRCQSLSVLTSVSGIRSEASDINKATEISSKKSTAAHKKDILHKKPGIWHPFDCLAKSGPQAVSSFIRSPLLPMAMHVRMHLKYMGWTIEHMVDEAGRQRFRYLSPNGRLKEHSLRQVCFRLKQPDKSLTTPGMANPPSLSSENQTYSTQEMRSIVLALPAFNRSVALGEGLKLSTDTLLEYETQGNEEVFTRESRNFCPKKAFPGQKETLRVRIEPKTKAQGIILRLKSKRKQTPKKDEVIVGLQNVNRSMRRGHTSKKLMDIKNRVTSRGKTRVLRSRKRAQRVITPISRKHSPRNILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEEIFVILYDLIGKPREVSVEKLTWRLVQSLEPNMYGDDASKIEAAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKSGVADPIPSIASLGEQQCDILRIEDNSASDDGSEVHQAEQHLEESRSTKNPPEEIKTQEERLLIKKENRIVKFYSRRRSKCMRLT", "length": 1095, "header": "tr|Q9LUZ5-1|Q9LUZ5_ARATH Isoform 1 of PHD finger transcription factor OS=Arabidopsis thaliana OX=3702 GN=MZN1.7 PE=1 SV=1 CANONICAL=Q9LUZ5-1" }, "locus": { "chromosome": "5", "start_pos": 23686079, "end_pos": 23691394, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G58610.3", "url": "https://www.ensemblgenomes.org/id/AT5G58610.3" }, { "database": "Ensembl Peptide", "id": "AT5G58610.3", "url": "https://www.ensemblgenomes.org/id/AT5G58610.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B9T1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B9T1" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B9T1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B9T1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G58610", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G58610", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LUZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LUZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5" } ], "pmid": "" }, { "name": "transcription corepressor activity", "id": "GO:0003714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003714", "evidence": [ { "database": "UniProtKB", "id": "Q9LUZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q9LUZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LUZ5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 14, "end_pos": 16, "annotation": "n_glycosylation_sequon" }, { "start_pos": 444, "end_pos": 446, "annotation": "n_glycosylation_sequon" }, { "start_pos": 463, "end_pos": 465, "annotation": "n_glycosylation_sequon" }, { "start_pos": 549, "end_pos": 551, "annotation": "n_glycosylation_sequon" }, { "start_pos": 896, "end_pos": 898, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LYJ0-1", "uniprot_ac": "Q9LYJ0", "uniprot_id": "Q9LYJ0_ARATH", "mass": { "chemical_mass": 40266.0, "monoisotopic_mass": 40266.0 }, "refseq": { "ac": "NP_196974", "name": "NAD(P)-binding Rossmann-fold superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196974" }, "gene_names": [ { "name": "T9L3.2", "type": "synonym", "evidence": [ { "id": "NP_196974", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196974" }, { "id": "Q9LYJ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" } ] } ], "protein_names": [ { "name": "NAD(P)-binding Rossmann-fold superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_196974", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196974" }, { "id": "Q9LYJ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0", "locus": {} } ], "crossref": [ { "id": "AT5G14700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G14700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd08958", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08958", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "831322", "url": "https://www.ncbi.nlm.nih.gov/gene/831322", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LYJ0", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LYJ0*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001509", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001509", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050425", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050425", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G14700", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G14700", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ICFDQVI", "url": "https://omabrowser.org/oma/group/ICFDQVI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8BAV4", "url": "https://www.orthodb.org/?gene=A0A1P8BAV4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LYJ0", "url": "https://www.orthodb.org/?gene=Q9LYJ0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10366", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10366", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10366:SF483", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10366:SF483", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01073", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01073", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01370", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01370", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_196974", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196974", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G14700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G14700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BAV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BAV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BAV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BAV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYJ0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRIVRATETFSAELKEFMCAAVQRRKDDDGFRGSRGGGKSRNAMDLDSDAGNRLVCVTGGVSYLGRAIVKRLLVHGYSVRIVVDCPEDKEKVSEMEADAETASFSNMITSVVSRLTEIDSLIKAFDGCAGVFHTSAFVDPAGVSGYSKSMAELEAKVSESVIEACTRTASVRKCVFTSSLLACAWQKNPCNSLDHSVINEESWSDEQLCIDNKLWYALGKLKAEKAAWRIADSKGLKLATICPALITGPDFFNRNSTSTLAYLKGAKEMYSNGLLATMDVNRLAKAHVCLWEGLGNKTAFGRYICFDTILSRDGAEKLAKDIDVQIEKICGNSNDSDANTETEASLQISDKKLLDLMSRTLRSCYHES", "length": 368, "header": "tr|Q9LYJ0-1|Q9LYJ0_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYJ0-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BAV4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0/entry#A0A1P8BAV4-1", "sequence": { "sequence": "MRIVRATETFSAELKEFMCAAVQRRKDDDGFRGSRGGGKSRNAMDLDSDAGNRLVCVTGGVSYLGRAIVKRLLVHGYSVRIVVDCPEDKEKVSEMEADAETASFSNMITSVVSRLTEIDSLIKAFDGCAGVFHTSAFVDPAGVSGYSKSMAELEAKVSESVIEACTRTASVRKCVFTSSLLACAWQKNPCNSLDHSVINEESWSDEQLCIDNKLWYALGKLKAEKAAWRIADSKGLKLATICPALITGPDFFNRNSTSTLAYLKGKLKTNLIMNMNPKLRNRPRIMFIVI", "length": 290, "header": "tr|A0A1P8BAV4-1|Q9LYJ0_ARATH Computationally mapped isoform of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYJ0-1" }, "locus": { "chromosome": "5", "start_pos": 4740252, "end_pos": 4743512, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G14700.2", "url": "https://www.ensemblgenomes.org/id/AT5G14700.2" }, { "database": "Ensembl Peptide", "id": "AT5G14700.2", "url": "https://www.ensemblgenomes.org/id/AT5G14700.2" } ] } }, { "isoform_ac": "Q9LYJ0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0/entry#Q9LYJ0-1", "sequence": { "sequence": "MRIVRATETFSAELKEFMCAAVQRRKDDDGFRGSRGGGKSRNAMDLDSDAGNRLVCVTGGVSYLGRAIVKRLLVHGYSVRIVVDCPEDKEKVSEMEADAETASFSNMITSVVSRLTEIDSLIKAFDGCAGVFHTSAFVDPAGVSGYSKSMAELEAKVSESVIEACTRTASVRKCVFTSSLLACAWQKNPCNSLDHSVINEESWSDEQLCIDNKLWYALGKLKAEKAAWRIADSKGLKLATICPALITGPDFFNRNSTSTLAYLKGAKEMYSNGLLATMDVNRLAKAHVCLWEGLGNKTAFGRYICFDTILSRDGAEKLAKDIDVQIEKICGNSNDSDANTETEASLQISDKKLLDLMSRTLRSCYHES", "length": 368, "header": "tr|Q9LYJ0-1|Q9LYJ0_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYJ0-1" }, "locus": { "chromosome": "5", "start_pos": 4740238, "end_pos": 4743539, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G14700.1", "url": "https://www.ensemblgenomes.org/id/AT5G14700.1" }, { "database": "Ensembl Peptide", "id": "AT5G14700.1", "url": "https://www.ensemblgenomes.org/id/AT5G14700.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BAV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BAV4" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BAV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BAV4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G14700", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G14700", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9LYJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "Q9LYJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "steroid biosynthetic process", "id": "GO:0006694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006694", "evidence": [ { "database": "UniProtKB", "id": "Q9LYJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYJ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYJ0" }, { "id": "PF01073", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01073" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "3-beta hydroxysteroid dehydrogenase/isomerase", "eco_id": "ECO_0000259", "start_pos": 57, "end_pos": 250, "start_aa": "Val", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 255, "end_pos": 257 }, { "start_pos": 296, "end_pos": 298 }, { "start_pos": 334, "end_pos": 336 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"monoisotopic_mass": 42656.0 }, "refseq": { "ac": "NP_201288", "name": "programmed cell death 2 C-terminal domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201288" }, "gene_names": [ { "name": "MXK3.5", "type": "recommended", "evidence": [ { "id": "Q9LV94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" } ] }, { "name": "MXK3.5", "type": "synonym", "evidence": [ { "id": "NP_201288", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201288" } ] }, { "name": "MXK3_5", "type": "synonym", "evidence": [ { "id": "NP_201288", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201288" }, { "id": "Q9LV94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" } ] } ], "protein_names": [ { "name": "Programmed cell death 2 C-terminal domain-containing protein", "type": "synonym", "evidence": [ { "id": "Q9LV94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV94/entry#names_and_taxonomy" } ] }, { "name": "programmed cell death 2 C-terminal domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_201288", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201288" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV94", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MXK3.5", "url": "https://www.uniprot.org/uniprotkb/Q9LV94", "locus": {} } ], "crossref": [ { "id": "AT5G64830", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G64830", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "836606", "url": "https://www.ncbi.nlm.nih.gov/gene/836606", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MPGPWAD", "url": "https://omabrowser.org/oma/group/MPGPWAD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47762", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47762", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47762:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47762:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04194", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04194", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_201288", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201288", "database": "RefSeq", 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"MVGILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDEDFDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKFKKRLDANPEQCFRYWYGGKPILATEDMKSPDKCRNCDSQRHFEIQLMPPLIYFLHEGVVDKGIKQSLDNWDWMTLIVYTCSKSCANAVNGDWVVTEECVAVQYEKPMNLDHASFFK", "length": 380, "header": "tr|Q9LV94-1|Q9LV94_ARATH Isoform 1 of Programmed cell death 2 C-terminal domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MXK3.5 PE=1 SV=1 CANONICAL=Q9LV94-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BBQ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV94/entry#A0A1P8BBQ2-1", "sequence": { "sequence": "MVGILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDEDFDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKFKKRLDANPEQCFR", "length": 277, "header": "tr|A0A1P8BBQ2-1|Q9LV94_ARATH Computationally mapped isoform of Programmed cell death 2 C-terminal domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MXK3.5 PE=1 SV=1 CANONICAL=Q9LV94-1" }, "locus": { "chromosome": "5", "start_pos": 25914567, "end_pos": 25916652, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G64830.3", "url": "https://www.ensemblgenomes.org/id/AT5G64830.3" }, { "database": "Ensembl Peptide", "id": "AT5G64830.3", "url": "https://www.ensemblgenomes.org/id/AT5G64830.3" } ] } }, { "isoform_ac": "Q9LV94-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV94/entry#Q9LV94-1", "sequence": { "sequence": "MVGILLGLPGKWAEDELEPSDHYTTKIGGLPDWPPIPDDALKPELLNCCSCGSKLSLVAQVYAPISTEILDIQERTLYIFGCLMPKCGTSEQSWRAFSIQKAIAKEKGSTKIADLPVAFPKTHRLDGDDDDDDDDDEDFDFASLAKALAEASSAAASITKKQKSKPSGNASSGTKAKPSPLKSETRVEDHIKLETGAVVPCFYIYTKEEIPSKEVDRFSQNYSSLSIKDKGTGNNDESESEEKWEDEKYEYDKALNADRTYLKFKKRLDANPEQCFRYWYGGKPILATEDMKSPDKCRNCDSQRHFEIQLMPPLIYFLHEGVVDKGIKQSLDNWDWMTLIVYTCSKSCANAVNGDWVVTEECVAVQYEKPMNLDHASFFK", "length": 380, "header": "tr|Q9LV94-1|Q9LV94_ARATH Isoform 1 of Programmed cell death 2 C-terminal domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MXK3.5 PE=1 SV=1 CANONICAL=Q9LV94-1" }, "locus": { "chromosome": "5", "start_pos": 25914567, "end_pos": 25916652, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G64830.1", "url": "https://www.ensemblgenomes.org/id/AT5G64830.1" }, { "database": "Ensembl Peptide", "id": "AT5G64830.1", "url": "https://www.ensemblgenomes.org/id/AT5G64830.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 223, "end_pos": 223, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV94" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser223" }, { "start_pos": 226, "end_pos": 226, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV94" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser226" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BBQ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BBQ2" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9LV94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV94" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LV94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV94" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BBQ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BBQ2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LV94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV94" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D3ZSC2-1", "protein_name": "Programmed cell death 2-like", "gene_name": "Pdcd2l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAVRKPVLLGFRDSAVKGCPKGPAAWTASKIGGVPVYCPLEGSPFHRLLYVFACARRDCSDNQTRSWKVFRSQCLQVPEKETRNGQNQSEGLAAENWCEGSHDWGSDTEETPPPPPPADLGRDSNDARALDWTDKLQALHLQDSALAVACPSPSVPTEVPQFQPYYISVAEEDEYGNVADLDHAHSLLQEYQQREGVDMQQLLSVGCSDGDEKYEKTKVSSGDPTFYKFMKRISVCQGQILRYSWSGEPLFLSCPTFEVSEVPVCSGCGGQRAFEFQLMPALVSMLNSTNLGLTVEFGTILVYTCKQSCWPPNQQMPMEEFCVIQEDPDAFLFK", "length": 335 }, "evidence": [ { "id": "Q9LV94", "url": "https://omabrowser.org/oma/group/Q9LV94/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q54P06-1", "protein_name": "Programmed cell death protein 2 C-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSIKNDTKTFLGFIDEPIDSLKINKEEEEEDDYPYSTKIGGSPIWCAQPPNHLKDLKCNMCSSNLSFLLQAYCPLNSLPDYERNFYVFVCPSNECNPLSSGWRVIKCLDPLKEEEEDLQNEQIEDKVQELHQQNVIEKPLDDWGVEDSDDWGISSTTTTTTTTTASVTNSIDQLLKIRDDAIKEEKKRIKEEEQQKKNNNKINIEDDCINEEEIISGVIIPDDKSNKFQSCTLFIDEESIYTKKDKKSSNKNNNNNEESDLNQSILKKYQGIENTFGDESAEWSDETYEYVKDRVFSKFIKKISFAPDQCLRYSYGGKPLPMTAEGVKLLTFNQINNLPPHCSICNSVKVFEFQILSTLIAQIKLRDPLDPKKNQLEFSNAFIYTCPNNCFDKQKDTFNNVIYNEETIKIEKSI", "length": 414 }, "evidence": [ { "id": "Q9LV94", "url": "https://omabrowser.org/oma/group/Q9LV94/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8C5N5-1", "protein_name": "uS5 assembly chaperone PDCD2L", "gene_name": "Pdcd2l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAVRKPVLLGLRDTAVKGCPKGPSAWTSSKLGGVPDALPAVTTPGPQCGRCAQPLTLVVQVYCPLDGSPFHRLLYVFACARPGCGNSQTRSWKVFRSQCLQVPEKETWNAQNQSDSLAAENWCEGSQDWGSDTEETPPPPASDLGSDSNDVRALDWTEKLQALRLQDTALAVTCPSPSGEGLTVPTAVPQFQPYYICVAEEEDYGSVVDLDHAHSLLQEYQRREGVDMEQLLSLGSSDGDEKYEKTTVSSGDPTFYRFMKRIAACQEQILRYSWSGEPLFLSCPTFEVSEVPACSGCGGQRTFEFQLMPALVSMLSSANLGLAVEFGTILVYTCKQSCWPPNQQMPMEEFCVLQEDPDEFLFK", "length": 364 }, "evidence": [ { "id": "Q9LV94", "url": "https://omabrowser.org/oma/group/Q9LV94/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BRP1-1", "protein_name": "uS5 assembly chaperone PDCD2L", "gene_name": "PDCD2L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAVLKPVLLGLRDAPVHGSPTGPGAWTASKLGGIPDALPTVAAPRPVCQRCGQPLALVVQVYCPLEGSPFHRLLHVFACACPGCSTGGARSWKVFRSQCLQVPEREAQDAQKQGNSLAAEDWCEGADDWGSDTEEGPSPQFTLDFGNDASSAKDVDWTARLQDLRLQDAVLGAAHPVPPGLPLFLPYYICVADEDDYRDFVNLDHAHSLLRDYQQREGIAMDQLLSQSLPNDGDEKYEKTIIKSGDQTFYKFMKRIAACQEQILRYSWSGEPLFLTCPTSEVTELPACSQCGGQRIFEFQLMPALVSMLKSANLGLSVEFGTILVYTCEKSCWPPNHQTPMEEFCIIQEDPDELLFK", "length": 358 }, "evidence": [ { "id": "Q9LV94", "url": "https://omabrowser.org/oma/group/Q9LV94/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LV94", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LV94", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 169, "end_pos": 171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LV94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV94" }, { "id": "PF04194", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04194" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Programmed cell death protein 2 C-terminal", "eco_id": "ECO_0000259", "start_pos": 258, "end_pos": 366, "start_aa": "Asp", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 223, 226 ], "sequon_annotation_sites": [ { "start_pos": 169, "end_pos": 171 }, { "start_pos": 221, "end_pos": 223 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXC6-1", "uniprot_ac": "Q9LXC6", "uniprot_id": "Q9LXC6_ARATH", "mass": { "chemical_mass": 59660.0, "monoisotopic_mass": 59660.0 }, "refseq": {}, "gene_names": [ { "name": "F17I14.190", "type": "synonym", "evidence": [ { "id": "Q9LXC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6" } ] }, { "name": "F17I14_190", "type": "synonym", "evidence": [ { "id": "Q9LXC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6" } ] } ], "protein_names": [ { "name": "Octicosapeptide/Phox/Bem1p family protein", "type": "synonym", "evidence": [ { "id": "Q9LXC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXC6", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6", "locus": {} } ], "crossref": [ { "id": "AT5G09620", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G09620", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd06410", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06410", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "830821", "url": "https://www.ncbi.nlm.nih.gov/gene/830821", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G09620", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G09620", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LYHSVMR", "url": "https://omabrowser.org/oma/group/LYHSVMR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31066", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066:SF95", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31066:SF95", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00564", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00564", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G09620", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G09620", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BCE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BCE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BCE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BCE3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXC6", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXC6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKFSYNSYPDSAESSPRSRDVEFENPSPWEDQQQQNYKVKLMCSYGGKIQPRPHDNQLTYVNGDTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMMHEYDRLLRLSTKPARMRLFLFPSSPISGGFGSEGSTKSDRDTLNPIPSRPESEKSVTAPPNNADFLFGSEKVAPIPPSPVKVPQPVPEPVVLEPPQMFVDQRMLQPEHGVNPAEIQRQIQEFQMIQIRDQEQQMLHQNQLHQQQQQQEAIHQNQLHHQQEVIHQNQLLQQEAIHQNQMLQQQQQQEAMYRRKTEDEAGRYFPPTYTQNPAPVTNQQPPVGYWQGNTNNSNIQGNIYTTTSQNLPEQQQQQQQVYMIPAQSQAPGTLYQSVMRPTVQGNQGYYPSPVQRLHHPDAYMEQQNQPGYNVVQPQPTFSGGPQVMTSVGPQVMTSVGPPMGLQEPYSQMGKPVYYTVAGEGMMVQPPPAQPQQQQQQYQGMGQPVSGMTDLRTGPDGKVAVNMAAPQVSDSV", "length": 531, "header": "tr|Q9LXC6-1|Q9LXC6_ARATH Isoform 1 of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXC6-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BCE3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6/entry#A0A1P8BCE3-1", "sequence": { "sequence": "MDKFSYNSYPDSAESSPRSRDVEFENPSPWEDQQQQNYKVKLMCSYGGKIQPRPHDNQLTYVNGDTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMMHEYDRLLRLSTKPARMRLFLFPSSPISGGFGSEGSTKSDRDTLNPIPSRPESEKSVTAPPNNADFLFGSEKVAPIPPSPVKVPQPVPEPVVLEPPQMFVDQRMLQPEHGVNPAEIQRQIQEFQMIQIRDQEQQMLHQNQLHQQQQQQEAMYRRKTEDEAGRYFPPTYTQNPAPVTNQQPPVGYWQGNTNNSNIQGNIYTTTSQNLPEQQQQQQQVYMIPAQSQAPGTLYQSVMRPTVQGNQGYYPSPVQRLHHPDAYMEQQNQPGYNVVQPQPTFSGGPQVMTSVGPQVMTSVGPPMGLQEPYSQMGKPVYYTVAGEGMMVQPPPAQPQQQQQQYQGMGQPVSGMTDLRTGPDGKVAVNMAAPQVSDSV", "length": 493, "header": "tr|A0A1P8BCE3-1|Q9LXC6_ARATH Computationally mapped isoform of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXC6-1" }, "locus": { "chromosome": "5", "start_pos": 2983449, "end_pos": 2985509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G09620.2", "url": "https://www.ensemblgenomes.org/id/AT5G09620.2" }, { "database": "Ensembl Peptide", "id": "AT5G09620.2", "url": "https://www.ensemblgenomes.org/id/AT5G09620.2" } ] } }, { "isoform_ac": "Q9LXC6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXC6/entry#Q9LXC6-1", "sequence": { "sequence": "MDKFSYNSYPDSAESSPRSRDVEFENPSPWEDQQQQNYKVKLMCSYGGKIQPRPHDNQLTYVNGDTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMMHEYDRLLRLSTKPARMRLFLFPSSPISGGFGSEGSTKSDRDTLNPIPSRPESEKSVTAPPNNADFLFGSEKVAPIPPSPVKVPQPVPEPVVLEPPQMFVDQRMLQPEHGVNPAEIQRQIQEFQMIQIRDQEQQMLHQNQLHQQQQQQEAIHQNQLHHQQEVIHQNQLLQQEAIHQNQMLQQQQQQEAMYRRKTEDEAGRYFPPTYTQNPAPVTNQQPPVGYWQGNTNNSNIQGNIYTTTSQNLPEQQQQQQQVYMIPAQSQAPGTLYQSVMRPTVQGNQGYYPSPVQRLHHPDAYMEQQNQPGYNVVQPQPTFSGGPQVMTSVGPQVMTSVGPPMGLQEPYSQMGKPVYYTVAGEGMMVQPPPAQPQQQQQQYQGMGQPVSGMTDLRTGPDGKVAVNMAAPQVSDSV", "length": 531, "header": "tr|Q9LXC6-1|Q9LXC6_ARATH Isoform 1 of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXC6-1" }, "locus": { "chromosome": "5", "start_pos": 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"MVSIFLQSPTFLTPLSYPFSSRSSTKRTQHGASLSLRVTASRSSFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTHKKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDERMLSISMTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGLRPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQVDTSTFGVKGRRCC", "length": 459, "header": "tr|Q9LV69-1|Q9LV69_ARATH Isoform 1 of FAD-dependent oxidoreductase domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MJE7.7 PE=1 SV=1 CANONICAL=Q9LV69-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BCQ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV69/entry#A0A1P8BCQ6-1", "sequence": { "sequence": "MVSIFLQSPTFLTPLSYPFSSRSSTKRTQHGASLSLRVTASRSSFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTHKKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDERMLSISMTATMDTSGNLVLAISNFREQP", "length": 353, "header": "tr|A0A1P8BCQ6-1|Q9LV69_ARATH Computationally mapped isoform of FAD-dependent oxidoreductase domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MJE7.7 PE=1 SV=1 CANONICAL=Q9LV69-1" }, "locus": { "chromosome": "5", "start_pos": 19629658, "end_pos": 19632639, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G48440.3", "url": "https://www.ensemblgenomes.org/id/AT5G48440.3" }, { "database": "Ensembl Peptide", "id": "AT5G48440.3", "url": "https://www.ensemblgenomes.org/id/AT5G48440.3" } ] } }, { "isoform_ac": "F4K1P8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV69/entry#F4K1P8-1", "sequence": { "sequence": "MVSIFLQSPTFLTPLSYPFSSRSSTKRTQHGASLSLRVTASRSSFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTHKKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDERMLSISMTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGLRPYSKLLASNAPNQKYLKPAFGMFTKPELFF", "length": 425, "header": "tr|F4K1P8-1|F4K1P8_ARATH Computationally mapped isoform of FAD-dependent oxidoreductase domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MJE7.7 PE=1 SV=1 CANONICAL=Q9LV69-1" }, "locus": { "chromosome": "5", "start_pos": 19629767, "end_pos": 19632638, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G48440.2", "url": "https://www.ensemblgenomes.org/id/AT5G48440.2" }, { "database": "Ensembl Peptide", "id": "AT5G48440.2", "url": "https://www.ensemblgenomes.org/id/AT5G48440.2" } ] } }, { "isoform_ac": "Q9LV69-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV69/entry#Q9LV69-1", "sequence": { "sequence": "MVSIFLQSPTFLTPLSYPFSSRSSTKRTQHGASLSLRVTASRSSFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTHKKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDERMLSISMTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGLRPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQVDTSTFGVKGRRCC", "length": 459, "header": "tr|Q9LV69-1|Q9LV69_ARATH Isoform 1 of FAD-dependent oxidoreductase domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MJE7.7 PE=1 SV=1 CANONICAL=Q9LV69-1" }, "locus": { "chromosome": "5", "start_pos": 19629658, "end_pos": 19632775, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G48440.1", "url": "https://www.ensemblgenomes.org/id/AT5G48440.1" }, { "database": "Ensembl Peptide", "id": "AT5G48440.1", "url": "https://www.ensemblgenomes.org/id/AT5G48440.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BCQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BCQ6" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BCQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BCQ6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G48440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G48440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9LV69", "url": "https://www.uniprot.org/uniprotkb/Q9LV69" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LV69", "url": "https://www.uniprot.org/uniprotkb/Q9LV69" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LV69", "url": "https://www.uniprot.org/uniprotkb/Q9LV69" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LV69", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV69" }, { "id": "PF01266", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01266" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAD dependent oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 46, "end_pos": 438, "start_aa": "Asp", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXE4-1", "uniprot_ac": "Q9LXE4", "uniprot_id": "Q9LXE4_ARATH", "mass": { "chemical_mass": 38854.0, "monoisotopic_mass": 38854.0 }, "refseq": { "ac": "NP_197043", "name": "tRNA/rRNA methyltransferase (SpoU) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197043" }, "gene_names": [ { "name": "T20K14.1", "type": "synonym", "evidence": [ { "id": "NP_197043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197043" }, { "id": "Q9LXE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ] } ], "protein_names": [ { "name": "tRNA/rRNA methyltransferase (SpoU) family protein", "type": "synonym", "evidence": [ { "id": "NP_197043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197043" }, { "id": "Q9LXE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4", "locus": {} } ], "crossref": [ { "id": "AT5G15390", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G15390", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd18092", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18092", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "831391", "url": "https://www.ncbi.nlm.nih.gov/gene/831391", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001537", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001537", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029026", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029026", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G15390", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G15390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WDSTQEC", "url": "https://omabrowser.org/oma/group/WDSTQEC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43453", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43453", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43453:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43453:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00588", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00588", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_197043", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197043", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G15390", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G15390", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BD45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BD45-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD45-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXE4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSCKSLIRASISSFPFVPLPNPNFSITFISVRAFSPLSVLHPNSSCIVTARRTFHGAVALSPESLTEESPKDTVKGLLTTNRGEASSLMKMERRCSLSNGEGDCRGSWFPYEDRFRCGEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKEILMAEFSLRHSRSSICIAYEFAKRKQQHSTSS", "length": 350, "header": "tr|Q9LXE4-1|Q9LXE4_ARATH Isoform 1 of tRNA/rRNA methyltransferase (SpoU) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXE4-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BD45-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4/entry#A0A1P8BD45-1", "sequence": { "sequence": "MNSCKSLIRASISSFPFVPLPNPNFSITFISVRAFSPLSVLHPNSSCIVTARRTFHGAVALSPESLTEESPKDTVKGLLTTNRGEASSLMKMERRCSLSNGEGDCRGSWFPYEDRFRCGEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGR", "length": 260, "header": "tr|A0A1P8BD45-1|Q9LXE4_ARATH Computationally mapped isoform of tRNA/rRNA methyltransferase (SpoU) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXE4-1" }, "locus": { "chromosome": "5", "start_pos": 4995145, "end_pos": 4997428, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G15390.2", "url": "https://www.ensemblgenomes.org/id/AT5G15390.2" }, { "database": "Ensembl Peptide", "id": "AT5G15390.2", "url": "https://www.ensemblgenomes.org/id/AT5G15390.2" } ] } }, { "isoform_ac": "Q9LXE4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4/entry#Q9LXE4-1", "sequence": { "sequence": "MNSCKSLIRASISSFPFVPLPNPNFSITFISVRAFSPLSVLHPNSSCIVTARRTFHGAVALSPESLTEESPKDTVKGLLTTNRGEASSLMKMERRCSLSNGEGDCRGSWFPYEDRFRCGEVHLSSREVLEAVSPHMMEERTDRFRRVVENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSIPMNGMVDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKEILMAEFSLRHSRSSICIAYEFAKRKQQHSTSS", "length": 350, "header": "tr|Q9LXE4-1|Q9LXE4_ARATH Isoform 1 of tRNA/rRNA methyltransferase (SpoU) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXE4-1" }, "locus": { "chromosome": "5", "start_pos": 4995138, "end_pos": 4997489, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G15390.1", "url": "https://www.ensemblgenomes.org/id/AT5G15390.1" }, { "database": "Ensembl Peptide", "id": "AT5G15390.1", "url": "https://www.ensemblgenomes.org/id/AT5G15390.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD45" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD45" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G15390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G15390", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "pmid": "" }, { "name": "RNA methyltransferase activity", "id": "GO:0008173", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008173", "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "tRNA methylation", "id": "GO:0030488", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030488", "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "pmid": "" }, { "name": "tRNA guanine ribose methylation", "id": "GO:0002938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002938", "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LXE4", "url": "https://www.uniprot.org/uniprotkb/Q9LXE4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 167, "end_pos": 169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 44, "end_pos": 46, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": 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{ "start_pos": 286, "end_pos": 288 }, { "start_pos": 44, "end_pos": 46 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR28532", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28532", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28532:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28532:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT5G07570", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G07570", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BD46", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BD46-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BD78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": 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"MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", 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"MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1389, "header": "tr|A0A1P8BD46-1|Q9LY06_ARATH Computationally mapped isoform of Glycine/proline-rich protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LY06-1" }, "locus": { "chromosome": "5", "start_pos": 2391581, "end_pos": 2396329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07570.2", "url": "https://www.ensemblgenomes.org/id/AT5G07570.2" }, { "database": "Ensembl Peptide", "id": "AT5G07570.2", "url": "https://www.ensemblgenomes.org/id/AT5G07570.2" } ] } }, { "isoform_ac": "A0A1P8BD78-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY06/entry#A0A1P8BD78-1", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1357, "header": "tr|A0A1P8BD78-1|Q9LY06_ARATH Computationally mapped isoform of Glycine/proline-rich protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LY06-1" }, "locus": { "chromosome": "5", "start_pos": 2391581, "end_pos": 2396329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07570.3", "url": "https://www.ensemblgenomes.org/id/AT5G07570.3" }, { "database": "Ensembl Peptide", "id": "AT5G07570.3", "url": "https://www.ensemblgenomes.org/id/AT5G07570.3" } ] } }, { "isoform_ac": "Q9LY06-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY06/entry#Q9LY06-1", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504, "header": "tr|Q9LY06-1|Q9LY06_ARATH Isoform 1 of Glycine/proline-rich protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LY06-1" }, "locus": { "chromosome": "5", "start_pos": 2391722, "end_pos": 2396329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07570.1", "url": "https://www.ensemblgenomes.org/id/AT5G07570.1" }, { "database": "Ensembl Peptide", "id": "AT5G07570.1", "url": "https://www.ensemblgenomes.org/id/AT5G07570.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD46", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD46" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD46", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD46" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G07570", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07570", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "Q9LY06", "url": "https://omabrowser.org/oma/group/Q9LY06/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LY06", "url": "https://www.uniprot.org/uniprotkb/Q9LY06" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1380, "end_pos": 1382, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1380, "end_pos": 1382 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVV4-1", "uniprot_ac": "Q9LVV4", "uniprot_id": "Q9LVV4_ARATH", "mass": { "chemical_mass": 24525.0, "monoisotopic_mass": 24525.0 }, "refseq": { "ac": "NP_200110", "name": "ER-based factor for assembly of V-ATPase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200110" }, "gene_names": [ { "name": "MNB8.4", "type": "recommended", "evidence": [ { "id": "Q9LVV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ] }, { "name": "MNB8.4", "type": "synonym", "evidence": [ { "id": "NP_200110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200110" } ] }, { "name": "MNB8_4", "type": "synonym", "evidence": [ { "id": "NP_200110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200110" }, { "id": "Q9LVV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ] } ], "protein_names": [ { "name": "ER-based factor for assembly of V-ATPase", "type": "synonym", "evidence": [ { "id": "NP_200110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200110" }, { "id": "Q9LVV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MNB8.4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4", "locus": {} } ], "crossref": [ { "id": "AT5G52980", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G52980", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "835377", "url": "https://www.ncbi.nlm.nih.gov/gene/835377", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021013", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021013", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G52980", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G52980", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QMAPSER", "url": "https://omabrowser.org/oma/group/QMAPSER/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31394:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31394:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_200110", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200110", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G52980", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G52980", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BD54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD54", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BD54-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD54-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVV4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQPDPKNGSGLILSATEPLRSFLALASGDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDPSTRPDLLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEEPFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPALSAAGGILGLVLAMLVETLLFIIKTSKDDQIQSSKSFTQSSPSFTQSSPSFTPTTKKNQ", "length": 222, "header": "tr|Q9LVV4-1|Q9LVV4_ARATH Isoform 1 of ER-based factor for assembly of V-ATPase OS=Arabidopsis thaliana OX=3702 GN=MNB8.4 PE=1 SV=1 CANONICAL=Q9LVV4-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BD54-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4/entry#A0A1P8BD54-1", "sequence": { "sequence": "MDQPDPKNGSGLILSATEPLRSFLALASGDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDPSTRPDLLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEEPFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPALVSLILSDSENHQEDFCESCFSFPFRVLLVGFLD", "length": 197, "header": "tr|A0A1P8BD54-1|Q9LVV4_ARATH Computationally mapped isoform of ER-based factor for assembly of V-ATPase OS=Arabidopsis thaliana OX=3702 GN=MNB8.4 PE=1 SV=1 CANONICAL=Q9LVV4-1" }, "locus": { "chromosome": "5", "start_pos": 21482152, "end_pos": 21483722, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G52980.2", "url": "https://www.ensemblgenomes.org/id/AT5G52980.2" }, { "database": "Ensembl Peptide", "id": "AT5G52980.2", "url": "https://www.ensemblgenomes.org/id/AT5G52980.2" } ] } }, { "isoform_ac": "Q9LVV4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4/entry#Q9LVV4-1", "sequence": { "sequence": "MDQPDPKNGSGLILSATEPLRSFLALASGDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDPSTRPDLLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEEPFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPALSAAGGILGLVLAMLVETLLFIIKTSKDDQIQSSKSFTQSSPSFTQSSPSFTPTTKKNQ", "length": 222, "header": "tr|Q9LVV4-1|Q9LVV4_ARATH Isoform 1 of ER-based factor for assembly of V-ATPase OS=Arabidopsis thaliana OX=3702 GN=MNB8.4 PE=1 SV=1 CANONICAL=Q9LVV4-1" }, "locus": { "chromosome": "5", "start_pos": 21482140, "end_pos": 21483797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G52980.1", "url": "https://www.ensemblgenomes.org/id/AT5G52980.1" }, { "database": "Ensembl Peptide", "id": "AT5G52980.1", "url": "https://www.ensemblgenomes.org/id/AT5G52980.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 206, "end_pos": 206, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser206" }, { "start_pos": 213, "end_pos": 213, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser213" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD54" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BD54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD54" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G52980", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G52980", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "vacuolar proton-transporting V-type ATPase complex assembly", "id": "GO:0070072", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070072", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV4", "url": "https://www.uniprot.org/uniprotkb/Q9LVV4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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} ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LV05-1", "uniprot_ac": "Q9LV05", "uniprot_id": "Q9LV05_ARATH", "mass": { "chemical_mass": 133359.0, "monoisotopic_mass": 133359.0 }, "refseq": { "ac": "NP_200156", "name": "LOW protein: zinc finger CCCH domain protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200156" }, "gene_names": [ { "name": "MYN8.5", "type": "recommended", "evidence": [ { "id": "Q9LV05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV05" } ] }, { "name": "MYN8.5", "type": "synonym", "evidence": [ { "id": "NP_200156", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200156" } ] }, { "name": "MYN8_5", "type": "synonym", "evidence": [ { "id": "NP_200156", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200156" }, { "id": "Q9LV05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV05" } ] } ], "protein_names": [ { "name": "LOW protein: zinc finger CCCH domain protein", "type": "synonym", "evidence": [ { "id": "NP_200156", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200156" }, { "id": "Q9LV05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV05/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV05", "url": "https://www.uniprot.org/uniprotkb/Q9LV05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MYN8.5", "url": "https://www.uniprot.org/uniprotkb/Q9LV05", "locus": {} } ], "crossref": [ { "id": "AT5G53440", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G53440", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "835425", "url": "https://www.ncbi.nlm.nih.gov/gene/835425", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT5G53440", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G53440", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IQEPDHY", "url": "https://omabrowser.org/oma/group/IQEPDHY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34837", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34837", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34837:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34837:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PR:Q9LV05", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LV05", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_200156", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200156", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G53440", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G53440", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BD90", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BD90-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BD90-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV05", "url": "https://www.uniprot.org/uniprotkb/Q9LV05", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV05-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV05-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRSTRHKSSKHKDATKEYSDSEKETSLKEKKSKEESSTTVRVSKESGSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRDKYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITGSRSSRVEPDGDMTRPERQLSSSVVQEENGNASDQITKGASSREVAELSGGSERGTRQKVSEKTANMEDGVLGEFPAERSFAAKASPRPMVERSPSSTSLERRYNNRGGARRSIEVEETGHRNNARDYSATEEERHLVDETSQAELSFNNKANQNNSSFPPRPESRSGVSSPRVGPREEDNRVNTGGRYKRGGVDAMMGRGQSNMWRGVPSWPSPLSNGYFPFQHVPPHGAFQTMMPQFPSPALFGVRPSMEMNHQGISYHIPDAERFSGHMRPLGWQNMMDSSGASHMHGFFGDMSNSVRDESNMYGGSEWDQNRRMNGRGWESGADEWKSRNGDASMEVSSMSVKDDNSAQVADDESLGGQTSHSDNNRAKSVEAGSNLTSPAKELHASSPKTMEEVAADDPVSETIDNTERYCRHYLSKLDVSAGLADAELRKCISLLIGEEHLAMDDGTAVFVNLKEGGKRVTKSNSNSLKALSLFPSQNSSVFQIAMDFYKEQRFEIKGLPNVKNHEAPQVPPSNLVKVENNDDLNDARNGNSSIEATDMKIADVSDSDTSQKELQKVSSNAGAKMETETRDEGSSSPNPDNSPEALNAVSSDHIEGSEEAMASDHIEGSEEAVALDHIEGDEQEAKLDDGAGVDQTMETAPEHDGVPEGDAVTLTVAPPTLEAMDVDERKDLSEDENMEEAEEKKGANDGEEAEADDGDGDGSVVVGDVSPKVTEPLVHESDESVISRIHHSPQSTH", "length": 1181, "header": "tr|Q9LV05-1|Q9LV05_ARATH Isoform 1 of LOW protein: zinc finger CCCH domain protein OS=Arabidopsis thaliana OX=3702 GN=MYN8.5 PE=1 SV=1 CANONICAL=Q9LV05-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BD90-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV05/entry#A0A1P8BD90-1", "sequence": { "sequence": "MPRSTRHKSSKHKDATKEYSDSEKETSLKEKKSKEESSTTVRVSKESGSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRDKYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITGSRSSRVEPDGDMTRPERQLSSSVVQEENGNASDQITKGASSREVAELSGGSERGTRQKVSEKTANMEDGVLGEFPAERSFAAKASPRPMVERSPSSTSLERRYNNRGGARRSIEVEETGHRNNARDYSATEEERHLVDETSQAELSFNNKANQNNSSFPPRPESRSGVSSPRVGPREEDNRVNTGGRYKRGGVDAMMGRGQSNMWRGVPSWPSPLSNGYFPFQHVPPHGAFQTMMPQFPSPALFGVRPSMEMNHQGISYHIPDAERFSGHMRPLGWQNMMDSSGASHMHGFFGDMSNSVRDESNMYGGSEWDQNRRMNGRGWESGADEWKSRNGDASMEVSSMSVKDDNSAQVADDESLGGQTSHSDNNRAKSVEAGSNLTSPAKELHASSPKTMEEVAADDPVSETIDNTERYCRHYLSKLDVSAGLADAELRKCISLLIGEEHLAMDDGTAVFVNLKEGGKRVTKSNSNSLKALSLFPSQNSSVFQIAMDFYKEQRFEIKGLPNVKNHEAPQVPPSNLVKVENNDDLNDARNGNSSIEATDMKIADVSDSDTSQKELQKVSSNAGAKMETETRDEGSSSPNPDNSPEALNAVSSDHIEGSEEAVALDHIEGDEQEAKLDDGAGVDQTMETAPEHDGVPEGDAVTLTVAPPTLEAMDVDERKDLSEDENMEEAEEKKGANDGEEAEADDGDGDGSVVVGDVSPKVTEPLVHESDESVISRIHHSPQSTH", "length": 1169, "header": "tr|A0A1P8BD90-1|Q9LV05_ARATH Computationally mapped isoform of LOW protein: zinc finger CCCH domain protein OS=Arabidopsis thaliana OX=3702 GN=MYN8.5 PE=1 SV=1 CANONICAL=Q9LV05-1" }, "locus": { "chromosome": "5", "start_pos": 21683493, "end_pos": 21688223, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G53440.2", "url": "https://www.ensemblgenomes.org/id/AT5G53440.2" }, { "database": "Ensembl Peptide", "id": "AT5G53440.2", "url": "https://www.ensemblgenomes.org/id/AT5G53440.2" } ] } }, { "isoform_ac": "Q9LV05-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV05/entry#Q9LV05-1", "sequence": { "sequence": "MPRSTRHKSSKHKDATKEYSDSEKETSLKEKKSKEESSTTVRVSKESGSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRDKYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITGSRSSRVEPDGDMTRPERQLSSSVVQEENGNASDQITKGASSREVAELSGGSERGTRQKVSEKTANMEDGVLGEFPAERSFAAKASPRPMVERSPSSTSLERRYNNRGGARRSIEVEETGHRNNARDYSATEEERHLVDETSQAELSFNNKANQNNSSFPPRPESRSGVSSPRVGPREEDNRVNTGGRYKRGGVDAMMGRGQSNMWRGVPSWPSPLSNGYFPFQHVPPHGAFQTMMPQFPSPALFGVRPSMEMNHQGISYHIPDAERFSGHMRPLGWQNMMDSSGASHMHGFFGDMSNSVRDESNMYGGSEWDQNRRMNGRGWESGADEWKSRNGDASMEVSSMSVKDDNSAQVADDESLGGQTSHSDNNRAKSVEAGSNLTSPAKELHASSPKTMEEVAADDPVSETIDNTERYCRHYLSKLDVSAGLADAELRKCISLLIGEEHLAMDDGTAVFVNLKEGGKRVTKSNSNSLKALSLFPSQNSSVFQIAMDFYKEQRFEIKGLPNVKNHEAPQVPPSNLVKVENNDDLNDARNGNSSIEATDMKIADVSDSDTSQKELQKVSSNAGAKMETETRDEGSSSPNPDNSPEALNAVSSDHIEGSEEAMASDHIEGSEEAVALDHIEGDEQEAKLDDGAGVDQTMETAPEHDGVPEGDAVTLTVAPPTLEAMDVDERKDLSEDENMEEAEEKKGANDGEEAEADDGDGDGSVVVGDVSPKVTEPLVHESDESVISRIHHSPQSTH", "length": 1181, "header": "tr|Q9LV05-1|Q9LV05_ARATH Isoform 1 of LOW protein: zinc finger CCCH domain protein OS=Arabidopsis thaliana OX=3702 GN=MYN8.5 PE=1 SV=1 CANONICAL=Q9LV05-1" }, "locus": { "chromosome": "5", "start_pos": 21683144, "end_pos": 21688273, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G53440.1", "url": "https://www.ensemblgenomes.org/id/AT5G53440.1" }, { "database": "Ensembl Peptide", "id": "AT5G53440.1", "url": "https://www.ensemblgenomes.org/id/AT5G53440.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 1003, "end_pos": 1003, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser1003" }, { "start_pos": 1117, "end_pos": 1117, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser1117" }, { "start_pos": 1154, "end_pos": 1154, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser1154" }, { "start_pos": 1176, "end_pos": 1176, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser1176" }, { "start_pos": 171, "end_pos": 171, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser171" }, { "start_pos": 176, "end_pos": 176, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser176" }, { "start_pos": 184, "end_pos": 184, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser184" }, { "start_pos": 19, "end_pos": 19, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Tyr19" }, { "start_pos": 20, "end_pos": 20, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser20" }, { "start_pos": 221, "end_pos": 221, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr221" }, { "start_pos": 222, "end_pos": 222, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser222" }, { "start_pos": 22, "end_pos": 22, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser22" }, { "start_pos": 27, "end_pos": 27, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser27" }, { "start_pos": 295, "end_pos": 295, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser295" }, { "start_pos": 313, "end_pos": 313, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser313" }, { "start_pos": 427, "end_pos": 427, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser427" }, { "start_pos": 430, "end_pos": 430, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Tyr430" }, { "start_pos": 433, "end_pos": 433, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Tyr433" }, { "start_pos": 438, "end_pos": 438, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Thr438" }, { "start_pos": 440, "end_pos": 440, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Ser440" }, { "start_pos": 487, "end_pos": 487, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser487" }, { "start_pos": 490, "end_pos": 490, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser490" }, { "start_pos": 524, "end_pos": 524, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser524" }, { "start_pos": 532, "end_pos": 532, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser532" }, { "start_pos": 534, "end_pos": 534, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", 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"url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9LV05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV05" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Early nitrogen-deprivation responses in Arabidopsis roots reveal distinct differences on transcriptome and (phospho-) proteome levels between nitrate and ammonium nutrition.", "journal": "The Plant journal : for cell and molecular biology", "date": "2016-12", "authors": "Menz Jochen, Li Zhi, Schulze Waltraud X, Ludewig Uwe", 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"https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9LYG6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYG6" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BDA4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BDA4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G11640", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11640", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HRH4-1", "protein_name": "Thioredoxin-related transmembrane protein 2", "gene_name": "Tmx2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAVLAPLIALVYSVPRLSRWLARPYCLLSALLSAAFLLVRKLPPICNGLPTQREDGNPCDFDWREVEILMFLSAIVMMKNRRSITVEQHVGNIFMFSKVANAILFFRLDIRMGLLYLTLCIVFLMTCKPPLYMGPEYIKYFSDKTIEEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVGTRYKVSTSPLTKQLPTLILFQGGKEVIRRPQIDKKGRAVSWTFSEENVIREFNLNELYQRAKKMSKGGDNVSEEKPVVSTPTAVPDGENKKDK", "length": 296 }, "evidence": [ { "id": "Q9LYG6", "url": "https://omabrowser.org/oma/group/Q9LYG6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q7JW12-1", "protein_name": "Thioredoxin-related transmembrane protein 2 homolog", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTWKKQMALLAKPYYWVNILLAISYLLAKKTQFICTRLFILAGEDEACDLDSREVEILFFLLIVVMIRSRKTGSVTMINYLASSFLYTKVANAILWAYADFRYGLGFLLLCVLVGMVLPEPSYRGPEHITYFRNAQVFEEELARDKRTSWLICFYTVWNPSCVNFAPVFAELSAEYNTDHLKFGKIDIGRFPDVAQKYRISDSSFSRQLPTVILFQQGKETDRRPCVDSKGKLQKFFFSSDNVRATFGLNQLYKEAIERLPIAPKEAKKVQ", "length": 271 }, "evidence": [ { "id": "Q9LYG6", "url": "https://omabrowser.org/oma/group/Q9LYG6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9D710-1", "protein_name": "Thioredoxin-related transmembrane protein 2", "gene_name": "Tmx2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVLAPLIALVYSVPRLSRWLARPYCLLSALLSIAFLLVRKLPPICNGLPTQREDGNPCDFDWREVEILMFLSAIVMMKNRRSITVEQHVGNIFMFSKVANAILFFRLDIRMGLLYLTLCIVFLMTCKPPLYMGPEYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCSGLNFGKVDVGRYTDVSTRYKVSTSPLTRQLPTLILFQGGKEVIRRPQIDKKGRAVSWTFSEENVIREFNLNELYQRAKKHSKGGDMSEEKPVDPAPTTVPDGENKKDK", "length": 295 }, "evidence": [ { "id": "Q9LYG6", "url": "https://omabrowser.org/oma/group/Q9LYG6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y320-1", "protein_name": "Thioredoxin-related transmembrane protein 2", "gene_name": "TMX2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVLAPLIALVYSVPRLSRWLAQPYYLLSALLSAAFLLVRKLPPLCHGLPTQREDGNPCDFDWREVEILMFLSAIVMMKNRRSITVEQHIGNIFMFSKVANTILFFRLDIRMGLLYITLCIVFLMTCKPPLYMGPEYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLNELYQRAKKLSKAGDNIPEEQPVASTPTTVSDGENKKDK", "length": 296 }, "evidence": [ { 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZ27-1", "uniprot_ac": "Q9LZ27", "uniprot_id": "Q9LZ27_ARATH", "mass": { "chemical_mass": 75340.0, "monoisotopic_mass": 75340.0 }, "refseq": { "ac": "NP_196090", "name": "Ankyrin repeat family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196090" }, "gene_names": [ { "name": "MUK11.2", "type": "recommended", "evidence": [ { "id": "Q9LZ27", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27" } ] }, { "name": "MUK11.2", "type": "synonym", "evidence": [ { "id": "NP_196090", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196090" } ] } ], "protein_names": [ { "name": "Ankyrin repeat family protein", "type": "synonym", "evidence": [ { "id": "NP_196090", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196090" }, { "id": "Q9LZ27", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZ27", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MUK11.2", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27", "locus": {} } ], "crossref": [ { "id": "AT5G04700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G04700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "830348", "url": "https://www.ncbi.nlm.nih.gov/gene/830348", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G04700", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G04700", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DRNMKCW", "url": "https://omabrowser.org/oma/group/DRNMKCW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8BDR9", "url": "https://www.orthodb.org/?gene=A0A1P8BDR9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LZ27", "url": "https://www.orthodb.org/?gene=Q9LZ27", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24177", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24177", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24177:SF456", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24177:SF456", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_196090", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196090", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G04700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G04700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BDR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BDR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BDR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BDR9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ27", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ27-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAMSSNYLDATLKETFRRSPFKFANTKVPHAGLGDSVSPIKEVPEEEEVPNDPVNIQIPFIESALSTSRLRGKNTNVYYEYIQLSQGISQGRVEIVKDFLNHHPDSVDEWINLYETPLLKACACGKPEIVKELLRRMTPEQMLPKMSQNASYHTPLTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEMARYLYTRTPVQVLLDQDGYHGSLLFLNAIFYKMLDIALDLFNMSRRLAVTKHSQIESIPIIVLASKPDLFPGGCYLGPLTRFIYSWIQVKLPTLPQPSRSNRDQQNTLMRKLLKGLSKWTGIDEVYRLKVMHLQAKKLLLGISEETLALGLKERSETVDEALLFAVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGKEGKWIVAPTILFACLPALLFVLLQYPLLKEMIFSTYGKGIFDRNMKCWA", "length": 669, "header": "tr|Q9LZ27-1|Q9LZ27_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN=MUK11.2 PE=1 SV=1 CANONICAL=Q9LZ27-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BDR9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27/entry#A0A1P8BDR9-1", "sequence": { "sequence": "MAMSSNYLDATLKETFRRSPFKFANTKVPHAGLGDSVSPIKEVPEEEEVPNDPVNIQIPFIESALSTSRLRGKNTNVYYEYIQLSQGISQGRVEIVKDFLNHHPDSVDEWINLYETPLLKACACGKPEIVKELLRRMTPEQMLPKMSQNASYHTPLTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEMARYLYTRTPVQVLLDQDGYHGSLLFLNAIFYKMLDIALDLFNMSRRLAVTKHSQIESIPIIVLASKPDLFPGGCYLGPLTRFIYSWIQVKLPTLPQPSRSNRDQQNTLMRKLLKGLSKWTGIDEVYRLKVMHLQAKKLLLGISEETLALGLKERSETVDEALLFAVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKVCSVSLMHS", "length": 474, "header": "tr|A0A1P8BDR9-1|Q9LZ27_ARATH Computationally mapped isoform of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN=MUK11.2 PE=1 SV=1 CANONICAL=Q9LZ27-1" }, "locus": { "chromosome": "5", "start_pos": 1353893, "end_pos": 1356804, "strand": "+", "evidence": [ { "database": "Ensembl 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"MAMSSNYLDATLKETFRRSPFKFANTKVPHAGLGDSVSPIKEVPEEEEVPNDPVNIQIPFIESALSTSRLRGKNTNVYYEYIQLSQGISQGRVEIVKDFLNHHPDSVDEWINLYETPLLKACACGKPEIVKELLRRMTPEQMLPKMSQNASYHTPLTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEMARYLYTRTPVQVLLDQDGYHGSLLFLNAIFYKMLDIALDLFNMSRRLAVTKHSQIESIPIIVLASKPDLFPGGCYLGPLTRFIYSWIQVKLPTLPQPSRSNRDQQNTLMRKLLKGLSKWTGIDEVYRLKVMHLQAKKLLLGISEETLALGLKERSETVDEALLFAVRYGNVDFLVEMIRNNSELLWSTRTSSSSTLFLLAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVERIAPEIEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGKEGKWIVAPTILFACLPALLFVLLQYPLLKEMIFSTYGKGIFDRNMKCWA", "length": 669, "header": "tr|Q9LZ27-1|Q9LZ27_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN=MUK11.2 PE=1 SV=1 CANONICAL=Q9LZ27-1" }, "locus": { "chromosome": "5", "start_pos": 1353893, "end_pos": 1356804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G04700.1", "url": "https://www.ensemblgenomes.org/id/AT5G04700.1" }, { "database": "Ensembl Peptide", "id": "AT5G04700.1", "url": "https://www.ensemblgenomes.org/id/AT5G04700.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BDR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BDR9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BDR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BDR9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G04700", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G04700", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ27", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ27", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 149, "end_pos": 151, "annotation": "n_glycosylation_sequon" }, { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 381, "end_pos": 383, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZ27", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ27" }, { "id": "PF13962", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962" } ], "ann_type": 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"https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G57210", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G57210", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GDHRFEK", "url": "https://omabrowser.org/oma/group/GDHRFEK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22957", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22957", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22957:SF652", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22957:SF652", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_200531", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200531", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G57210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G57210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8BE76", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BE76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8BE76-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BE76-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVD7", "url": "https://www.uniprot.org/uniprotkb/Q9LVD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVD7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVD7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAIHEETQISTTQDPPCTSNDASPPQDHRFEKLRGVRWRINLGILPSSPSSTIDELRRVTADSRRRYAALRRRLLIDPHLPKKGTNSPDLTIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHGSYFQSSGCQGMLRRILLLWCLKHPEIGYRQGMHELLAPLLYVLQVDVQYLTEVRSNYEDQFVDLFDELAFQERDSGAYDFDIKKVLDDSMEDEEEDGPPSGSTKKKKPKSFDELDTETQTAVLLSDAYGGEGELGIVLSDKFMEHDAYTMFDALMYGGSSLGSVSVANFFIYSAPNDSITGLPPVIEASGALYHLLSLVDASLHSHLVELGVEPQYFALRWLRVLFGREFPLSNLLIVWDEIFSADNSEVERGVEADLGCEFRILSSPRGALVAGMAVSMILYLRSSLLATENATSSLKKLLNFPEDIDLSKVIEKAKTLQSLALEINARRDLIPKGPRKPMRGHSLSVDSISLGSSPVGIEPESYWEEKWRVLNSAEEEERRKKALQRPKAGKKSWSERVKLRLSRTESDPSPAEAKRSGNKPHIRRSLLDDLSRQLGEKEIEPPEFPNPDTDIERSSTVSDTPSAEYEDNSSDKGKSENHMDLPLSIPENEPEAKSGMNIFRERKILSGKFQRLWRLGRNLSGEETSETKEAKQVDSEDGKTDSDSTSGPGDSLKNTGRSMLEHIKVIESVLELSSPENMTENGKLTVEEALRELRRLGNMLLSEM", "length": 737, "header": "tr|Q9LVD7-1|Q9LVD7_ARATH Isoform 1 of Ypt/Rab-GAP domain of gyp1p superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MJB24.2 PE=1 SV=1 CANONICAL=Q9LVD7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BE76-1", "url": 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23184053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G57210.1", "url": "https://www.ensemblgenomes.org/id/AT5G57210.1" }, { "database": "Ensembl Peptide", "id": "AT5G57210.1", "url": "https://www.ensemblgenomes.org/id/AT5G57210.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 412, "end_pos": 412, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" } ], "site_lbl": "Tyr412" }, { "start_pos": 475, "end_pos": 475, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser475" }, { "start_pos": 480, "end_pos": 480, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser480" }, { "start_pos": 539, "end_pos": 539, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser539" }, { "start_pos": 653, "end_pos": 653, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser653" }, { "start_pos": 658, "end_pos": 658, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser658" }, { "start_pos": 85, "end_pos": 85, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVD7" }, { "database": "PubMed", 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"MEFENRYGLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIFDIVGHFNRSEPVGSLPKTPVVCKPSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA", "length": 280, "header": "tr|Q9LZK9-1|Q9LZK9_ARATH Isoform 1 of Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZK9-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BF18-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZK9/entry#A0A1P8BF18-1", "sequence": { "sequence": "MFSLRTSCRLDSCVLDFFFWSTIFTVNIVVNSLILQKMEFENRYGLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIFDIVGHFNRSEPVGSLPKTPVVCKPSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA", "length": 317, "header": "tr|A0A1P8BF18-1|Q9LZK9_ARATH Computationally mapped isoform of Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZK9-1" }, "locus": { "chromosome": "5", "start_pos": 448105, "end_pos": 450654, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02230.3", "url": "https://www.ensemblgenomes.org/id/AT5G02230.3" }, { "database": "Ensembl Peptide", "id": "AT5G02230.3", "url": "https://www.ensemblgenomes.org/id/AT5G02230.3" } ] } }, { "isoform_ac": "Q9LZK9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZK9/entry#Q9LZK9-1", "sequence": { "sequence": "MEFENRYGLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIFDIVGHFNRSEPVGSLPKTPVVCKPSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA", "length": 280, "header": "tr|Q9LZK9-1|Q9LZK9_ARATH Isoform 1 of Haloacid dehalogenase-like 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O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BF18", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BF18" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BF18", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BF18" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02230", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02230", "resource": "KEGG Pathway" } ], 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"F4KIZ7", "url": "https://www.uniprot.org/uniprotkb/F4KIZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4KIZ7-1", "url": "https://www.uniprot.org/uniprotkb/F4KIZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVU7", "url": "https://www.uniprot.org/uniprotkb/Q9LVU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVU7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVU7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPFCEVVKEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLTGTDKPNDDDDDDGGIVSDDSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISLLDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQINACWLHKITKVEIELIRSAGFLVSVIHGRYGTPKKLESKSPCALSLEFVDLVKHLYLYTVVNVRMCWVICRHDVIAQICYARRLAQRLYPVARMVDLHGGHLVSHERTEEVNKALLELIKASEMKKISTDWTNLTMETPGYFKRRLTLIRSSTEGKNVASPAHFIAEKFHGFLLFLFGLLVLAFEYSRRAFRAVNPVKVGPSLT", "length": 438, "header": "tr|Q9LVU7-1|Q9LVU7_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MNB8.11 PE=1 SV=1 CANONICAL=Q9LVU7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8BFL3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVU7/entry#A0A1P8BFL3-1", "sequence": { "sequence": "MPFCEVVKEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLTGTDKPNDDDDDDGGIVSDDSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISLLDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQINACWLHKITKVEIELIRSAGFLVSVIHGRYGTPKKLESKSPCALSLEFVDLVKHLYLYTVVNVRMCWVICRHDVIAQICYARRLAQRLYPVARMVDLHGGHLVSHERTEEVLLSYLARS", "length": 353, "header": "tr|A0A1P8BFL3-1|Q9LVU7_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MNB8.11 PE=1 SV=1 CANONICAL=Q9LVU7-1" }, "locus": { "chromosome": "5", "start_pos": 21511396, "end_pos": 21513620, "strand": "+", "evidence": [ { "database": "Ensembl 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"id": "AT5G53050.6", "url": "https://www.ensemblgenomes.org/id/AT5G53050.6" }, { "database": "Ensembl Peptide", "id": "AT5G53050.6", "url": "https://www.ensemblgenomes.org/id/AT5G53050.6" } ] } }, { "isoform_ac": "F4KIZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVU7/entry#F4KIZ7-1", "sequence": { "sequence": "MPFCEVVKEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLTGTDKPNDDDDDDGGIVSDDSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISLLDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQINACWLHKITKVEIELIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLHGGHLVSHERTEEVLLLIKLCSS", "length": 312, "header": "tr|F4KIZ7-1|Q9LVU7_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MNB8.11 PE=1 SV=1 CANONICAL=Q9LVU7-1" }, "locus": { "chromosome": "5", "start_pos": 21510163, "end_pos": 21513507, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G53050.1", "url": "https://www.ensemblgenomes.org/id/AT5G53050.1" }, { "database": "Ensembl Peptide", "id": "AT5G53050.1", "url": "https://www.ensemblgenomes.org/id/AT5G53050.1" } ] } }, { "isoform_ac": "Q9LVU7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVU7/entry#Q9LVU7-1", "sequence": { "sequence": "MPFCEVVKEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLTGTDKPNDDDDDDGGIVSDDSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISLLDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQINACWLHKITKVEIELIRSAGFLVSVIHGRYGTPKKLESKSPCALSLEFVDLVKHLYLYTVVNVRMCWVICRHDVIAQICYARRLAQRLYPVARMVDLHGGHLVSHERTEEVNKALLELIKASEMKKISTDWTNLTMETPGYFKRRLTLIRSSTEGKNVASPAHFIAEKFHGFLLFLFGLLVLAFEYSRRAFRAVNPVKVGPSLT", "length": 438, "header": "tr|Q9LVU7-1|Q9LVU7_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MNB8.11 PE=1 SV=1 CANONICAL=Q9LVU7-1" }, "locus": { "chromosome": "5", "start_pos": 21510534, "end_pos": 21513576, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G53050.4", "url": "https://www.ensemblgenomes.org/id/AT5G53050.4" }, { "database": "Ensembl Peptide", "id": "AT5G53050.4", "url": "https://www.ensemblgenomes.org/id/AT5G53050.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BFL3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BFL3" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BFL3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BFL3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G53050", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G53050", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": 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24172975, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G60030.2", "url": "https://www.ensemblgenomes.org/id/AT5G60030.2" }, { "database": "Ensembl Peptide", "id": "AT5G60030.2", "url": "https://www.ensemblgenomes.org/id/AT5G60030.2" } ] } }, { "isoform_ac": "Q9LVH1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVH1/entry#Q9LVH1-1", "sequence": { "sequence": "MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKSKETKPSSDRETKSTETKQSSDAKSERNVIDEFDGRKIRYRNSEAVSVESVYGRERDEKKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEERKSKKKRKLKEIDD", "length": 292, "header": "tr|Q9LVH1-1|Q9LVH1_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=MGO3.1 PE=1 SV=1 CANONICAL=Q9LVH1-1" }, "locus": { "chromosome": "5", "start_pos": 24171888, "end_pos": 24173046, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G60030.1", "url": "https://www.ensemblgenomes.org/id/AT5G60030.1" }, { "database": "Ensembl Peptide", "id": "AT5G60030.1", "url": "https://www.ensemblgenomes.org/id/AT5G60030.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 143, "end_pos": 143, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVH1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser143" }, { "start_pos": 240, "end_pos": 240, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVH1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser240" }, 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J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BGJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BGJ5" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LVH1", "url": 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"authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8BGJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8BGJ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LVH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVH1" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT5G60030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G60030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LVH1", "url": "https://www.uniprot.org/uniprotkb/Q9LVH1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], 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"MASQRHLKDLLEEDQEPFQLQSYISDRRCQINAHVTHLQVKKRRPISQNAGLPSRFCRNACFFSLRESPDPKKSPLFELKSPNRSQNAIFVNIPARTASILLEAAVRIQKQSSEVSKTRTRNAGNAFGIFGSVLKKLTNRKKREISGGKEAGRVSSSSVKDMLRWESPVVRKIVTRKSKRNEEENASSQTHKIASETHFSRRSSSSGVWSESVTNGERSWDVDFETSISTSSRSNGSDEFAMMMNGQDLSEDKRFCESPFHFVLQTMPSNGGFRTPNFSSPAASPRHDCHEMEKESYEVEKLKKLEMEEEEEEKEQSSPVSVLDPPFQDDDEDIHMDDNNIPSSFRSVQKAKHLLLQKLCRFEQLAGLDPMELEKRMSDQETEEEEEEEEEEMKSLYHCEIITQRVLKTYFEEMVEVPEGVEALISDLAAEELPSDIDGEAEAAIVAKRVCERLRSWRDVESNTIDMMVEHDFRTERLGLWRSKNDADVSETVLDIEFEIFEDLVEELSEDIGGNR", "length": 516, "header": "tr|Q9LZS1-1|Q9LZS1_ARATH Isoform 1 of Histone-lysine N-methyltransferase SETD1B-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM28 PE=4 SV=1 CANONICAL=Q9LZS1-1" }, "isoforms": [ { "isoform_ac": "A0A1R7T3F9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZS1/entry#A0A1R7T3F9-1", "sequence": { "sequence": "MASQRHLKDLLEEDQEPFQLQSYISDRRCQINAHVTHLQVKKRRPISQNAGLPSRFCRNACFFSLRESPDPKKSPLFELKSPNRSQNAIFVNIPARTASILLEAAVRIQKQSSEVSKTRTRNAGNAFGIFGSVLKKLTNRKKREISGGKEAGRVSSSSVKDMLRWESPVVRKIVTRKSKRNEEENASSQTHKIASETHFSRRSSSSGVWSESVTNGERSWDVDFETSISTSSRSNGSDEFAMMMNGQDLSEDKRFCESPFHFVLQTMPSNGGFRTPNFSSPAASPRHDCHEMEKESYEVEKLKKLEMEEEEEEKEQSSPVSVLDPPFQDDDEDIHMDDNNIPSSFRSVQSTFSNHSFVSKVLPTFFHLIPSYSYQTIDSSLNGYKTVVRLICFRSRTVACSCTNSVFVIMSLSDVLHVISARI", "length": 423, "header": "tr|A0A1R7T3F9-1|Q9LZS1_ARATH Computationally mapped isoform of Histone-lysine N-methyltransferase SETD1B-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM28 PE=4 SV=1 CANONICAL=Q9LZS1-1" }, "locus": { "chromosome": "5", "start_pos": 947311, "end_pos": 949337, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G03670.2", "url": "https://www.ensemblgenomes.org/id/AT5G03670.2" }, { "database": "Ensembl Peptide", "id": "AT5G03670.2", "url": "https://www.ensemblgenomes.org/id/AT5G03670.2" } ] } }, { "isoform_ac": "Q9LZS1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZS1/entry#Q9LZS1-1", "sequence": { "sequence": "MASQRHLKDLLEEDQEPFQLQSYISDRRCQINAHVTHLQVKKRRPISQNAGLPSRFCRNACFFSLRESPDPKKSPLFELKSPNRSQNAIFVNIPARTASILLEAAVRIQKQSSEVSKTRTRNAGNAFGIFGSVLKKLTNRKKREISGGKEAGRVSSSSVKDMLRWESPVVRKIVTRKSKRNEEENASSQTHKIASETHFSRRSSSSGVWSESVTNGERSWDVDFETSISTSSRSNGSDEFAMMMNGQDLSEDKRFCESPFHFVLQTMPSNGGFRTPNFSSPAASPRHDCHEMEKESYEVEKLKKLEMEEEEEEKEQSSPVSVLDPPFQDDDEDIHMDDNNIPSSFRSVQKAKHLLLQKLCRFEQLAGLDPMELEKRMSDQETEEEEEEEEEEMKSLYHCEIITQRVLKTYFEEMVEVPEGVEALISDLAAEELPSDIDGEAEAAIVAKRVCERLRSWRDVESNTIDMMVEHDFRTERLGLWRSKNDADVSETVLDIEFEIFEDLVEELSEDIGGNR", "length": 516, "header": "tr|Q9LZS1-1|Q9LZS1_ARATH Isoform 1 of Histone-lysine N-methyltransferase SETD1B-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM28 PE=4 SV=1 CANONICAL=Q9LZS1-1" }, "locus": { "chromosome": "5", "start_pos": 947146, "end_pos": 950239, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G03670.1", "url": "https://www.ensemblgenomes.org/id/AT5G03670.1" }, { "database": "Ensembl Peptide", "id": "AT5G03670.1", "url": "https://www.ensemblgenomes.org/id/AT5G03670.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A1R7T3F9", "url": "https://www.uniprot.org/uniprotkb/A0A1R7T3F9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1R7T3F9", "url": "https://www.uniprot.org/uniprotkb/A0A1R7T3F9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G03670", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G03670", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZS1", "url": "https://www.uniprot.org/uniprotkb/Q9LZS1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 277, "end_pos": 279, "annotation": "n_glycosylation_sequon" }, { "start_pos": 83, "end_pos": 85, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 185, "end_pos": 187 }, { "start_pos": 235, "end_pos": 237 }, { "start_pos": 277, "end_pos": 279 }, { "start_pos": 83, "end_pos": 85 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LY88", "url": "https://www.orthodb.org/?gene=Q9LY88", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR36795", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36795", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36795:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36795:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT5G14410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G14410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1R7T3K1", "url": "https://www.uniprot.org/uniprotkb/A0A1R7T3K1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1R7T3K1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1R7T3K1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LY88", 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OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LY88-1" }, "locus": { "chromosome": "5", "start_pos": 4646702, "end_pos": 4647503, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G14410.2", "url": "https://www.ensemblgenomes.org/id/AT5G14410.2" }, { "database": "Ensembl Peptide", "id": "AT5G14410.2", "url": "https://www.ensemblgenomes.org/id/AT5G14410.2" } ] } }, { "isoform_ac": "Q9LY88-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY88/entry#Q9LY88-1", "sequence": { "sequence": "MDSSPKITNLPYKRLSLEDDVFGETTRRRSSFYSYRFKRVVSLGGRRRIRVRVKIRRLRGFVRKKANRVKTGILKILKRLKESQSHFGDLFAGNYLFMQVNPSSLNAKYVFDKSFQGQNGNFPSRLSLPRVLM", "length": 133, "header": "tr|Q9LY88-1|Q9LY88_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LY88-1" }, "locus": { "chromosome": "5", "start_pos": 4646756, "end_pos": 4647461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G14410.1", "url": "https://www.ensemblgenomes.org/id/AT5G14410.1" }, { "database": "Ensembl Peptide", "id": "AT5G14410.1", "url": "https://www.ensemblgenomes.org/id/AT5G14410.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, 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"NP_190836", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190836", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G52680", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G52680", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A2H1ZEJ9", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEJ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A2H1ZEJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEJ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXJ6", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXJ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MISPTMEQGESLRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLEMYTREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERRKVLNGLDGVVRASNSCQLVFKFDPSYLGSDSP", "length": 456, "header": "sp|Q9LXJ6-1|FDL21_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9LXJ6-1" }, "isoforms": [ { "isoform_ac": "A0A2H1ZEJ9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ6/entry#A0A2H1ZEJ9-1", "sequence": { "sequence": "MISPTMEQGESLRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLEMYTREAEWWNLLTLMLENSPKLQVLKLTDVRHFIISQLAIFYGLGNAIH", "length": 364, "header": "tr|A0A2H1ZEJ9-1|FDL21_ARATH Computationally mapped isoform of F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LXJ6-1" }, "locus": { "chromosome": "3", "start_pos": 19526997, "end_pos": 19529062, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52680.2", "url": "https://www.ensemblgenomes.org/id/AT3G52680.2" }, { "database": "Ensembl Peptide", "id": "AT3G52680.2", "url": "https://www.ensemblgenomes.org/id/AT3G52680.2" } ] } }, { "isoform_ac": "Q9LXJ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ6/entry#Q9LXJ6-1", "sequence": { "sequence": "MISPTMEQGESLRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLEMYTREAEWWNLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERRKVLNGLDGVVRASNSCQLVFKFDPSYLGSDSP", "length": 456, "header": "sp|Q9LXJ6-1|FDL21_ARATH Isoform 1 of F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9LXJ6-1" }, "locus": { "chromosome": "3", "start_pos": 19526968, "end_pos": 19529062, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52680.1", "url": "https://www.ensemblgenomes.org/id/AT3G52680.1" }, { "database": "Ensembl Peptide", "id": "AT3G52680.1", "url": "https://www.ensemblgenomes.org/id/AT3G52680.1" } ] } } ], 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N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEJ9", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEJ9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEJ9", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEJ9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G52680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ6", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LXJ6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 456, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", 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] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49150", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49150", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RRIDCEW", "url": "https://omabrowser.org/oma/group/RRIDCEW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M3B7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M3B7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT3G49150", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49150", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A2H1ZEK2", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A2H1ZEK2-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M3B7", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M3B7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDICCKDIISDHSKKDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNETIFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDLDLRCIVYWDNGTMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLTFFCEDVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDSLVYASICLQMTSHQRTHASYEHLVGNATDFLLGISNVQILELFANTIEVLTFCCEQIPVFKNLVCLIIKTDQKAGWESLPVLLKNCPDLESLIFDGLHHNDTIKCEDVDGCLCKSSRGIPSCLSSSPVQFLTIWKFGEICDDYDDMEKQIELVMYFLETMPNLEEMKLFYDTQIYEDVISKLQMDLRRTLSLRSLFNARCYQPSCSGIIQRDDVHEEKPHYGSFLHQRSFSSSMILSQQHMMRSPSHFPLCSPFGVSTYRPMSTSHISGSDESGDVNHVAETLTDLVQQDTVIEVADAAIDSSIQLDFVQQIVHNVHSLTGLNWWASIVFTTFLIRGVTIPLMIECERWFSKRMVIKQCSFVNT", "length": 630, "header": "sp|Q9M3B7-1|FBL54_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9M3B7-1" }, "isoforms": [ { "isoform_ac": "A0A2H1ZEK2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7/entry#A0A2H1ZEK2-1", "sequence": { "sequence": "MDICCKDIISDHSKKDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNETIFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDLDLRCIVYWDNGTMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLTFFCEDVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDSLVYASICLQMTSHQRTHASYEHLVGNATDFLLGISNVQILELFANTIEVCIVIPSSSFLATLKQKEDKQVSVTCLAGWESLPVLLKNCPDLESLIFDGLHHNDTIKCEDVDGCLCKSSRGIPSCLSSSPVQFLTIWKFGEICDDYDDMEKQIELVMYFLETMPNLEEMKLFYDTQIYEDVISKLQMLVTSSKCTVYIIPEV", "length": 467, "header": "tr|A0A2H1ZEK2-1|FBL54_ARATH Computationally mapped isoform of Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M3B7-1" }, "locus": { "chromosome": "3", "start_pos": 18218858, "end_pos": 18220430, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49150.1", "url": "https://www.ensemblgenomes.org/id/AT3G49150.1" }, { "database": "Ensembl Peptide", "id": "AT3G49150.1", "url": "https://www.ensemblgenomes.org/id/AT3G49150.1" } ] } }, { "isoform_ac": "Q9M3B7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7/entry#Q9M3B7-1", "sequence": { "sequence": "MDICCKDIISDHSKKDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNETIFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDLDLRCIVYWDNGTMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLTFFCEDVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDSLVYASICLQMTSHQRTHASYEHLVGNATDFLLGISNVQILELFANTIEVLTFCCEQIPVFKNLVCLIIKTDQKAGWESLPVLLKNCPDLESLIFDGLHHNDTIKCEDVDGCLCKSSRGIPSCLSSSPVQFLTIWKFGEICDDYDDMEKQIELVMYFLETMPNLEEMKLFYDTQIYEDVISKLQMDLRRTLSLRSLFNARCYQPSCSGIIQRDDVHEEKPHYGSFLHQRSFSSSMILSQQHMMRSPSHFPLCSPFGVSTYRPMSTSHISGSDESGDVNHVAETLTDLVQQDTVIEVADAAIDSSIQLDFVQQIVHNVHSLTGLNWWASIVFTTFLIRGVTIPLMIECERWFSKRMVIKQCSFVNT", "length": 630, "header": "sp|Q9M3B7-1|FBL54_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9M3B7-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEK2", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEK2", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49150", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49150", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M3B7", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein catabolic process", "id": "GO:0030163", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030163", "evidence": [ { "database": "UniProtKB", "id": "Q9M3B7", "url": "https://www.uniprot.org/uniprotkb/Q9M3B7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" }, { "start_pos": 292, "end_pos": 294, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 74, "end_pos": 76, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9M3B7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 630, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9M3B7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9M3B7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 135, "end_pos": 137 }, { "start_pos": 292, "end_pos": 294 }, { "start_pos": 366, "end_pos": 368 }, { "start_pos": 74, "end_pos": 76 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M0U8-1", "uniprot_ac": "Q9M0U8", "uniprot_id": "FBL21_ARATH", "mass": { "chemical_mass": 34410.0, "monoisotopic_mass": 34410.0 }, "refseq": {}, "gene_names": [ { "name": "FBL21", "type": "recommended", "evidence": [ { "id": "Q9M0U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8" } ] }, { "name": "C6L9", "type": "synonym", "evidence": [ { "id": "Q9M0U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8" } ] } ], "protein_names": [ { "name": "Putative F-box/LRR-repeat protein 21", "type": "recommended", "evidence": [ { "id": "Q9M0U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0U8", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "FBL21", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8", "locus": {} } ], "crossref": [ { "id": "Q9M0U8", "url": "https://alphafold.ebi.ac.uk/entry/Q9M0U8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G05470", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G05470", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22164", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22164", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825897", "url": "https://www.ncbi.nlm.nih.gov/gene/825897", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G05470", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G05470", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CTIDILE", "url": "https://omabrowser.org/oma/group/CTIDILE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR38926", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR38926", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR38926:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR38926:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M0U8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M0U8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G05470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G05470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A2H1ZEM3", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEM3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A2H1ZEM3-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEM3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0U8", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0U8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTASSKMTSSTTLLSLFMKEDEEGRNKKTTTSTTLESLLMKERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPYNGV", "length": 304, "header": "sp|Q9M0U8-1|FBL21_ARATH Isoform 1 of Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1 CANONICAL=Q9M0U8-1" }, "isoforms": [ { "isoform_ac": "A0A2H1ZEM3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0U8/entry#A0A2H1ZEM3-1", "sequence": { "sequence": "MTASSKMTSSTTLLSLFMKEDEEGRNKKTTTSTTLESLLMKERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRSRNLRSLGLGMCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPYNGV", "length": 306, "header": "tr|A0A2H1ZEM3-1|FBL21_ARATH 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"MGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEYSNLL", "length": 222, "header": "tr|B3H455-1|Q9SAF3_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAF3-1" }, "locus": { "chromosome": "1", "start_pos": 4501581, "end_pos": 4503543, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G13195.2", "url": "https://www.ensemblgenomes.org/id/AT1G13195.2" }, { "database": "Ensembl Peptide", "id": "AT1G13195.2", "url": "https://www.ensemblgenomes.org/id/AT1G13195.2" } ] } }, { "isoform_ac": "Q9SAF3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3/entry#Q9SAF3-1", "sequence": { "sequence": "MYNQLAISSSSSSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEYSNLL", "length": 260, "header": "tr|Q9SAF3-1|Q9SAF3_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAF3-1" }, "locus": { "chromosome": "1", "start_pos": 4501581, "end_pos": 4503676, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G13195.1", "url": "https://www.ensemblgenomes.org/id/AT1G13195.1" }, { "database": "Ensembl Peptide", "id": "AT1G13195.1", "url": "https://www.ensemblgenomes.org/id/AT1G13195.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 253, "end_pos": 253, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Tyr253" }, { "start_pos": 254, "end_pos": 254, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Tyr254" }, { "start_pos": 257, "end_pos": 257, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Ser257" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "B3H455", "url": "https://www.uniprot.org/uniprotkb/B3H455" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF3" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H455", "url": "https://www.uniprot.org/uniprotkb/B3H455" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G13195", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G13195", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF3", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF3", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF3", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF3", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SAF3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAF3" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 162, "end_pos": 200, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 253, 254, 257 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZ87-1", "uniprot_ac": "Q9LZ87", "uniprot_id": "Q9LZ87_ARATH", "mass": { "chemical_mass": 95228.0, "monoisotopic_mass": 95228.0 }, "refseq": { "ac": "NP_001318458", "name": "TRM32-like protein (DUF3741)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, "gene_names": [ { "name": "DAU1", "type": "recommended", "evidence": [ { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] }, { "name": "DAU1", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" } ] }, { "name": "DUO1-activated unknown 1", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] }, { "name": "T1E22.150", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] }, { "name": "T1E22_150", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] }, { "name": "TON1 Recruiting Motif 16", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] }, { "name": "TRM16", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ] } ], "protein_names": [ { "name": "TRM32-like protein (DUF3741)", "type": "synonym", "evidence": [ { "id": "NP_001318458", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458" }, { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZ87", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "DAU1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87", "locus": { "chromosome": "CP002688.1", "start_pos": 508577, "end_pos": 512270, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "AT5G02390", "url": "https://www.ensemblgenomes.org/id/AT5G02390" } ] } } ], "crossref": [ { "id": "AT5G02390", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G02390", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "830266", "url": "https://www.ncbi.nlm.nih.gov/gene/830266", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022212", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022212", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025486", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025486", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044257", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044257", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G02390", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GQKMAGF", "url": "https://omabrowser.org/oma/group/GQKMAGF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "B3H571", "url": "https://www.orthodb.org/?gene=B3H571", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LZ87", "url": "https://www.orthodb.org/?gene=Q9LZ87", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47071", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47071", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47071:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47071:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12552", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12552", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14309", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14309", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001318458", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318458", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G02390", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G02390", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "B3H571", "url": "https://www.uniprot.org/uniprotkb/B3H571", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H571-1", "url": "https://www.uniprot.org/uniprotkb/B3H571-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ87", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ87-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKNLRHKVTCSPIQNHPGFMWGLFDILKHNHWRYIKKRLPHKRPVCRRTAPGTKNEVNNTIPSSPDGIPVPKIKLEDKTDVESVQRPKKPSSAVKSKESSNSGEKTKKKHNPEEKSKKLNSEERSRKTHSEIKRSVKALIKALVIEDKSKKKGRHHRSCTYPVQSNSKEKDSLSEVGSSDKNSSNGDERNRVFNKKVGISPAVGSLNPLYLMSEESSNSDSEEFRVDNNIQVDDNTDGSKSDFDEKEFKKKEKSDDEEAWFDPKMRHTKGFSENDDDTSPRRSKACLDALNLIHMNRNFLLKVLQDPGSPLARHFQSQQSFSSKTMTKAGSFPTHGINREDHNKAFDPVGDVDKIPMSPPSIAAEHRADGIQKMNETVLKLGDEDSSGSGYARKRGKNQVVIKRFKDLRQKIKHVINENKNEKHRITMDAVLDKVPRKYGFSKDLRDDIFEHLKGNSAAKNNNKAEGTKLKQITRASSLCGSLDRYLQLYECSFQREAKNSSNSEKSKMELEESALPSKRAPKFLGRILSLPQMKFHALKIDDLTVQSIEEEQDGLDNISEISEDHSQSSEHETLDQTMDASEDSPVDAETEQDREISTLDVEHETRSLKESSEESPNNVSTVDIDENASVFDISRDLDTETVSTSKQLDEEVLNIDAQDKVKFNYVRDILEISGFNAPESLSMWQLDYQPLDPLVYEEVTTTTTGCMFQDPECSRNEEEGGNCNHLLLFDLINEVLIEIYERSYHYYPKPLSSLCKIHPMPVGYSVLKEVWVRISCYLRYKPYDEQQSFDKVMSRDLSRDDGWMDLQFESECVGIEVEDLIFEELLEELLISC", "length": 835, "header": "tr|Q9LZ87-1|Q9LZ87_ARATH Isoform 1 of TRM32-like protein (DUF3741) OS=Arabidopsis thaliana OX=3702 GN=DAU1 PE=1 SV=1 CANONICAL=Q9LZ87-1" }, "isoforms": [ { "isoform_ac": "B3H571-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87/entry#B3H571-1", "sequence": { "sequence": "MGKNLRHKVTCSPIQNHPGFMWGLFDILKHNHWRYIKKRLPHKRPVCRRTAPGTKNEVNNTIPSSPDGIPVPKIKLEDKTDVESVQRPKKPSSAVKSKESSNSGEKTKKKHNPEEKSKKLNSEERSRKTHSEIKRSVKALIKALVIEDKSKKKGRHHRSCTYPVQSNSKEKDSLSEVGSSDKNSSNGDERNRVFNKKVGISPAVGSLNPLYLMSEESSNSDSEEFRVDNNIQVDDNTDGSKSDFDEKEFKKKEKSDDEEAWFDPKMRHTKGFSENDDDTSPRRSKACLDALNLIHMNRNFLLKVLQDPGSPLARHFQSQQSFSSKTMTKAGSFPTHGINREDHNKAFDPVGDVDKIPMSPPSIAAEHRADGIQKMNETVLKLGDEDSSGSGYARKRGKNQVVIKRFKDLRQKIKHVINENKNEKHRITMDAVLDKVPRKYGFSKDLRDDIFEHLKGNSAAKNNNKAEGTKLKQITRASSLCGSLDRYLQLYECSFQREAKNSSNSEKSKMELEESALPSKRAPKFLGRILSLPQMKFHALKIDDLTVQSIEEEQDGLDNISEISEDHSQSSEHETLDQTMDASEDSPVDAETEQDREISTLDVEHETRSLKESSEESPNNVSTVDIDENASVFDISRDLDTETVSTSKQLDEEVLNIDAQDKVKFNYVRDILEISGFNAPESLSMWQLDYQPLDPLVYEEVTTTTTGCMFQDPECSRNEEEGGNCNHLLLFDLINEGFVERRWMDGFAVRE", "length": 751, "header": "tr|B3H571-1|Q9LZ87_ARATH Computationally mapped isoform of TRM32-like protein (DUF3741) OS=Arabidopsis thaliana OX=3702 GN=DAU1 PE=1 SV=1 CANONICAL=Q9LZ87-1" }, "locus": { "chromosome": "5", "start_pos": 508630, "end_pos": 511805, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02390.2", "url": "https://www.ensemblgenomes.org/id/AT5G02390.2" }, { "database": "Ensembl Peptide", "id": "AT5G02390.2", "url": "https://www.ensemblgenomes.org/id/AT5G02390.2" } ] } }, { "isoform_ac": "Q9LZ87-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87/entry#Q9LZ87-1", "sequence": { "sequence": "MGKNLRHKVTCSPIQNHPGFMWGLFDILKHNHWRYIKKRLPHKRPVCRRTAPGTKNEVNNTIPSSPDGIPVPKIKLEDKTDVESVQRPKKPSSAVKSKESSNSGEKTKKKHNPEEKSKKLNSEERSRKTHSEIKRSVKALIKALVIEDKSKKKGRHHRSCTYPVQSNSKEKDSLSEVGSSDKNSSNGDERNRVFNKKVGISPAVGSLNPLYLMSEESSNSDSEEFRVDNNIQVDDNTDGSKSDFDEKEFKKKEKSDDEEAWFDPKMRHTKGFSENDDDTSPRRSKACLDALNLIHMNRNFLLKVLQDPGSPLARHFQSQQSFSSKTMTKAGSFPTHGINREDHNKAFDPVGDVDKIPMSPPSIAAEHRADGIQKMNETVLKLGDEDSSGSGYARKRGKNQVVIKRFKDLRQKIKHVINENKNEKHRITMDAVLDKVPRKYGFSKDLRDDIFEHLKGNSAAKNNNKAEGTKLKQITRASSLCGSLDRYLQLYECSFQREAKNSSNSEKSKMELEESALPSKRAPKFLGRILSLPQMKFHALKIDDLTVQSIEEEQDGLDNISEISEDHSQSSEHETLDQTMDASEDSPVDAETEQDREISTLDVEHETRSLKESSEESPNNVSTVDIDENASVFDISRDLDTETVSTSKQLDEEVLNIDAQDKVKFNYVRDILEISGFNAPESLSMWQLDYQPLDPLVYEEVTTTTTGCMFQDPECSRNEEEGGNCNHLLLFDLINEVLIEIYERSYHYYPKPLSSLCKIHPMPVGYSVLKEVWVRISCYLRYKPYDEQQSFDKVMSRDLSRDDGWMDLQFESECVGIEVEDLIFEELLEELLISC", "length": 835, "header": "tr|Q9LZ87-1|Q9LZ87_ARATH Isoform 1 of TRM32-like protein (DUF3741) OS=Arabidopsis thaliana OX=3702 GN=DAU1 PE=1 SV=1 CANONICAL=Q9LZ87-1" }, "locus": { "chromosome": "5", "start_pos": 508587, "end_pos": 511710, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02390.3", "url": "https://www.ensemblgenomes.org/id/AT5G02390.3" }, { "database": "Ensembl Peptide", "id": "AT5G02390.3", "url": "https://www.ensemblgenomes.org/id/AT5G02390.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 93, "end_pos": 93, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZ87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZ87" } ], "site_lbl": "Ser93" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "B3H571", "url": "https://www.uniprot.org/uniprotkb/B3H571" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H571", "url": "https://www.uniprot.org/uniprotkb/B3H571" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02390", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ87", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "pollen sperm cell differentiation", "id": "GO:0048235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048235", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ87", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 183, "end_pos": 185, "annotation": "n_glycosylation_sequon" }, { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" }, { "start_pos": 501, "end_pos": 503, "annotation": "n_glycosylation_sequon" }, { "start_pos": 559, "end_pos": 561, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" }, { "start_pos": 620, "end_pos": 622, "annotation": "n_glycosylation_sequon" }, { "start_pos": 629, "end_pos": 631, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" }, { "id": "PF12552", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12552" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF3741", "eco_id": "ECO_0000259", "start_pos": 240, "end_pos": 312, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9LZ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ87" }, { "id": "PF14309", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14309" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LONGIFOLIA 1/2-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 665, "end_pos": 830, "start_aa": "Phe", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 93 ], "sequon_annotation_sites": [ { "start_pos": 183, "end_pos": 185 }, { "start_pos": 376, "end_pos": 378 }, { "start_pos": 501, "end_pos": 503 }, { "start_pos": 559, "end_pos": 561 }, { "start_pos": 59, "end_pos": 61 }, { "start_pos": 620, "end_pos": 622 }, { "start_pos": 629, "end_pos": 631 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LW59-1", "uniprot_ac": "Q9LW59", "uniprot_id": "Q9LW59_ARATH", "mass": { "chemical_mass": 89448.0, "monoisotopic_mass": 89448.0 }, "refseq": { "ac": "NP_188979", "name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188979" }, "gene_names": [], "protein_names": [ { "name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "type": "synonym", "evidence": [ { "id": "NP_188979", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188979" }, { "id": "Q9LW59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW59/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LW59", "url": "https://www.uniprot.org/uniprotkb/Q9LW59" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LW59", "locus": {} } ], "crossref": [ { "id": "AT3G23370", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G23370", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00590", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00590", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821918", "url": "https://www.ncbi.nlm.nih.gov/gene/821918", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G23370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR34568", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34568", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34568:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34568:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_188979", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188979", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLU3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLU3-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLU4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLU4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H5H9", "url": "https://www.uniprot.org/uniprotkb/B3H5H9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H5H9-1", "url": "https://www.uniprot.org/uniprotkb/B3H5H9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW59", "url": "https://www.uniprot.org/uniprotkb/Q9LW59", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW59-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW59-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAIARLLSPKSTPQFNNRGFVILTRRWLSSSLEDGRKCERLSDSEASTNKDIGQKVVHWYSLGGLISNLKQKIMGNVILMDKSSGEDSVLPKSPMVSSSDVAVTKVVTLKNVAESENCIHSSVKEEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSVSEMGSQDASQSVAGIEACGKRESITVSNDRLGNINRLDGLESGQGKVLRSIRTERVDPSEEQSSKDVTLGFLTEEVSESQTSSRKNMGKLQPAKGLFDKVKPPQNSLSKLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPNENDEHRLSDAPQNLSSLTSVLLRDWIDEQRSEDLAAIRERKSIFSLESSRNTVAPMAVGTMKKLMDSLNFPTDNGTDAEANSLNSNSREEKWISEGNSAMQNSDRFCAIEEEEPQGETFVMETQSLCSQDTLDATTVNPKVTKKSFLALSAGEHSPNKVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLDATRCHTLITELLL", "length": 811, "header": "tr|Q9LW59-1|Q9LW59_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW59-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLU3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW59/entry#A0A1I9LLU3-1", "sequence": { "sequence": "MGNVILMDKSSGEDSVLPKSPMVSSSDVAVTKVVTLKNVAESENCIHSSVKEEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSVSEMGSQDASQSVAGIEACGKRESITVSNDRLGNINRLDGLESGQGKVLRSIRTERVDPSEEQSSKDVTLGFLTEEVSESQTSSRKNMGKLQPAKGLFDKVKPPQNSLSKLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPNENDEHRLSDAPQNLSSLTSVLLRDWIDEQRSEDLAAIRERKSIFSLESSRNTVAPMAVGTMKKLMDSLNFPTDNGTDAEANSLNSNSREEKWISEGNSAMQNSDRFCAIEEEEPQGETFVMETQSLCSQDTLDATTVNPKFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLDATRCHTLITELLL", "length": 698, "header": "tr|A0A1I9LLU3-1|A0A1I9LLU3_ARATH Computationally mapped isoform of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW59-1" }, "locus": { "chromosome": "3", "start_pos": 8357569, "end_pos": 8360865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23370.4", "url": "https://www.ensemblgenomes.org/id/AT3G23370.4" }, { "database": "Ensembl Peptide", "id": "AT3G23370.4", "url": "https://www.ensemblgenomes.org/id/AT3G23370.4" } ] } }, { "isoform_ac": "A0A1I9LLU4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW59/entry#A0A1I9LLU4-1", "sequence": { "sequence": "MLIWVMHCSFFYFLICDNFLMCRDIGQKVVHWYSLGGLISNLKQKIMGNVILMDKSSGEDSVLPKSPMVSSSDVAVTKVVTLKNVAESENCIHSSVKEEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSVSEMGSQDASQSVAGIEACGKRESITVSNDRLGNINRLDGLESGQGKVLRSIRTERVDPSEEQSSKDVTLGFLTEEVSESQTSSRKNMGKLQPAKGLFDKVKPPQNSLSKLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPNENDEHRLSDAPQNLSSLTSVLLRDWIDEQRSEDLAAIRERKSIFSLESSRNTVAPMAVGTMKKLMDSLNFPTDNGTDAEANSLNSNSREEKWISEGNSAMQNSDRFCAIEEEEPQGETFVMETQSLCSQDTLDATTVNPKFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLDATRCHTLITELLL", "length": 744, "header": "tr|A0A1I9LLU4-1|A0A1I9LLU4_ARATH Computationally mapped isoform of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW59-1" }, "locus": { "chromosome": "3", "start_pos": 8357569, "end_pos": 8360865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23370.3", "url": "https://www.ensemblgenomes.org/id/AT3G23370.3" }, { "database": "Ensembl Peptide", "id": "AT3G23370.3", "url": "https://www.ensemblgenomes.org/id/AT3G23370.3" } ] } }, { "isoform_ac": "B3H5H9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW59/entry#B3H5H9-1", "sequence": { "sequence": "MAIARLLSPKSTPQFNNRGFVILTRRWLSSSLEDGRKCERLSDSEASTNKDIGQKVVHWYSLGGLISNLKQKIMGNVILMDKSSGEDSVLPKSPMVSSSDVAVTKVVTLKNVAESENCIHSSVKEEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSVSEMGSQDASQSVAGIEACGKRESITVSNDRLGNINRLDGLESGQGKVLRSIRTERVDPSEEQSSKDVTLGFLTEEVSESQTSSRKNMGKLQPAKGLFDKVKPPQNSLSKLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPNENDEHRLSDAPQNLSSLTSVLLRDWIDEQRSEDLAAIRERKSIFSLESSRNTVAPMAVGTMKKLMDSLNFPTDNGTDAEANSLNSNSREEKWISEGNSAMQNSDRFCAIEEEEPQGETFVMETQSLCSQDTLDATTVNPKFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLDATRCHTLITELLL", "length": 771, "header": "tr|B3H5H9-1|Q9LW59_ARATH Computationally mapped isoform of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW59-1" }, "locus": { "chromosome": "3", "start_pos": 8357571, "end_pos": 8360920, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23370.2", "url": "https://www.ensemblgenomes.org/id/AT3G23370.2" }, { "database": "Ensembl Peptide", "id": "AT3G23370.2", "url": "https://www.ensemblgenomes.org/id/AT3G23370.2" } ] } }, { "isoform_ac": "Q9LW59-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW59/entry#Q9LW59-1", "sequence": { "sequence": "MAIARLLSPKSTPQFNNRGFVILTRRWLSSSLEDGRKCERLSDSEASTNKDIGQKVVHWYSLGGLISNLKQKIMGNVILMDKSSGEDSVLPKSPMVSSSDVAVTKVVTLKNVAESENCIHSSVKEEIGSEDASQSVAADNKICITSSIKEESFVSEMGSQDASQSVAVENKNCISSSIKEESSVSEMGSQDASQSVAGIEACGKRESITVSNDRLGNINRLDGLESGQGKVLRSIRTERVDPSEEQSSKDVTLGFLTEEVSESQTSSRKNMGKLQPAKGLFDKVKPPQNSLSKLFVNSDPYKEVKHPLRFETLSNSNSSMSTGESCSDAGDQHSLFGKMLSDPVQEIKSIPNENDEHRLSDAPQNLSSLTSVLLRDWIDEQRSEDLAAIRERKSIFSLESSRNTVAPMAVGTMKKLMDSLNFPTDNGTDAEANSLNSNSREEKWISEGNSAMQNSDRFCAIEEEEPQGETFVMETQSLCSQDTLDATTVNPKVTKKSFLALSAGEHSPNKVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPSIEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRTIVARISNLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKLVVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLDATRCHTLITELLL", "length": 811, "header": "tr|Q9LW59-1|Q9LW59_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW59-1" }, "locus": { "chromosome": "3", "start_pos": 8357585, "end_pos": 8361171, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23370.1", "url": "https://www.ensemblgenomes.org/id/AT3G23370.1" }, { "database": "Ensembl Peptide", "id": "AT3G23370.1", "url": "https://www.ensemblgenomes.org/id/AT3G23370.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 700, "end_pos": 700, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LW59", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LW59" } ], "site_lbl": "Ser700" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "B3H5H9", "url": "https://www.uniprot.org/uniprotkb/B3H5H9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H5H9", "url": "https://www.uniprot.org/uniprotkb/B3H5H9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G23370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9LW59", "url": "https://www.uniprot.org/uniprotkb/Q9LW59" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LW59", "url": "https://www.uniprot.org/uniprotkb/Q9LW59" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LW59", "url": "https://www.uniprot.org/uniprotkb/Q9LW59" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 317, "end_pos": 319, "annotation": "n_glycosylation_sequon" }, { "start_pos": 365, "end_pos": 367, "annotation": "n_glycosylation_sequon" }, { "start_pos": 426, "end_pos": 428, "annotation": "n_glycosylation_sequon" }, { "start_pos": 640, "end_pos": 642, "annotation": "n_glycosylation_sequon" }, { "start_pos": 696, "end_pos": 698, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LW59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW59" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 677, "end_pos": 762, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 700 ], "sequon_annotation_sites": [ { "start_pos": 317, "end_pos": 319 }, { "start_pos": 365, "end_pos": 367 }, { "start_pos": 426, "end_pos": 428 }, { "start_pos": 640, "end_pos": 642 }, { "start_pos": 696, "end_pos": 698 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LYC0-1", "uniprot_ac": "Q9LYC0", "uniprot_id": "Q9LYC0_ARATH", "mass": { "chemical_mass": 22927.0, "monoisotopic_mass": 22927.0 }, "refseq": { "ac": "NP_191861", "name": "hypothetical protein (DUF3049)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191861" }, "gene_names": [], "protein_names": [ { "name": "FAF domain-containing protein", "type": "recommended", "evidence": [ { "id": "Q9LYC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0/entry#names_and_taxonomy" } ] }, { "name": "hypothetical protein (DUF3049)", "type": "synonym", "evidence": [ { "id": "NP_191861", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191861" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYC0", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0", "locus": {} } ], "crossref": [ { "id": "AT3G63020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G63020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825477", "url": "https://www.ncbi.nlm.nih.gov/gene/825477", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR046431", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046431", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G63020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G63020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MTQCSTI", "url": "https://omabrowser.org/oma/group/MTQCSTI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF11250", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11250", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191861", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G63020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G63020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "B3H5Y2", "url": "https://www.uniprot.org/uniprotkb/B3H5Y2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H5Y2-1", "url": "https://www.uniprot.org/uniprotkb/B3H5Y2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYC0", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYC0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSSSTILTGDIDEEHRTSSMAEEDTPTHSHRRRWSTPVDSGGEPLQSLSVSRSLEIKSDHENPDDECREHRGVCGVILDEYFSCSSKNNSYSFYLGGKISPWGPYGPPLLTESRSKAPSPRRGRSVTRKRDLPPFLTTLDCNGRPRFHHRRVRSEGRLEIASVAVDSPEIVSVRGREGLRIGTVRISQQNDVVEDDNEDKQNH", "length": 204, "header": "tr|Q9LYC0-1|Q9LYC0_ARATH Isoform 1 of FAF domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYC0-1" }, "isoforms": [ { "isoform_ac": "B3H5Y2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0/entry#B3H5Y2-1", "sequence": { "sequence": "MLIMTSSSTILTGDIDEEHRTSSMAEEDTPTHSHRRRWSTPVDSGGEPLQSLSVSRSLEIKSDHENPDDECREHRGGKISPWGPYGPPLLTESRSKAPSPRRGRSVTRKRDLPPFLTTLDCNGRPRFHHRRVRSEGRLEIASVAVDSPEIVSVRGREGLRIGTVRISQQNDVVEDDNEDKQNH", "length": 183, "header": "tr|B3H5Y2-1|Q9LYC0_ARATH Computationally mapped isoform of FAF domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9LYC0-1" }, "locus": { "chromosome": "3", "start_pos": 23294382, "end_pos": 23295143, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G63020.2", "url": "https://www.ensemblgenomes.org/id/AT3G63020.2" }, { "database": "Ensembl Peptide", "id": "AT3G63020.2", "url": "https://www.ensemblgenomes.org/id/AT3G63020.2" } ] } }, { "isoform_ac": "Q9LYC0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0/entry#Q9LYC0-1", "sequence": { "sequence": "MTSSSTILTGDIDEEHRTSSMAEEDTPTHSHRRRWSTPVDSGGEPLQSLSVSRSLEIKSDHENPDDECREHRGVCGVILDEYFSCSSKNNSYSFYLGGKISPWGPYGPPLLTESRSKAPSPRRGRSVTRKRDLPPFLTTLDCNGRPRFHHRRVRSEGRLEIASVAVDSPEIVSVRGREGLRIGTVRISQQNDVVEDDNEDKQNH", "length": 204, "header": "tr|Q9LYC0-1|Q9LYC0_ARATH Isoform 1 of FAF domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYC0-1" }, "locus": { "chromosome": "3", "start_pos": 23294425, "end_pos": 23295039, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G63020.1", "url": "https://www.ensemblgenomes.org/id/AT3G63020.1" }, { "database": "Ensembl Peptide", "id": "AT3G63020.1", "url": "https://www.ensemblgenomes.org/id/AT3G63020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "B3H5Y2", "url": "https://www.uniprot.org/uniprotkb/B3H5Y2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H5Y2", "url": "https://www.uniprot.org/uniprotkb/B3H5Y2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G63020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G63020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYC0", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYC0" }, { "id": "PF11250", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11250" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAF", "eco_id": "ECO_0000259", "start_pos": 133, "end_pos": 180, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 89, "end_pos": 91 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M034-1", "uniprot_ac": "Q9M034", "uniprot_id": "Q9M034_ARATH", "mass": { "chemical_mass": 36971.0, "monoisotopic_mass": 36971.0 }, "refseq": {}, "gene_names": [ { "name": "T10O8.100", "type": "synonym", "evidence": [ { "id": "Q9M034", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ] }, { "name": "T10O8_100", "type": "synonym", "evidence": [ { "id": "Q9M034", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ] } ], "protein_names": [ { "name": "DNAJ heat shock family protein", "type": "synonym", "evidence": [ { "id": "Q9M034", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M034/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M034", "locus": {} } ], "crossref": [ { "id": "AT5G01390", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G01390", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd10747", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10747", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "831415", "url": "https://www.ncbi.nlm.nih.gov/gene/831415", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002939", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002939", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051339", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051339", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G01390", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G01390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MFFDEME", "url": "https://omabrowser.org/oma/group/MFFDEME/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "B3H6P7", "url": "https://www.orthodb.org/?gene=B3H6P7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4K9C8", "url": "https://www.orthodb.org/?gene=F4K9C8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4K9D0", "url": "https://www.orthodb.org/?gene=F4K9D0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M034", "url": "https://www.orthodb.org/?gene=Q9M034", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078:SF575", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078:SF575", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01556", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01556", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G01390", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G01390", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "B3H6P7", "url": "https://www.uniprot.org/uniprotkb/B3H6P7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H6P7-1", "url": "https://www.uniprot.org/uniprotkb/B3H6P7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4K9C8", "url": "https://www.uniprot.org/uniprotkb/F4K9C8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4K9C8-1", "url": "https://www.uniprot.org/uniprotkb/F4K9C8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4K9D0", "url": "https://www.uniprot.org/uniprotkb/F4K9D0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4K9D0-1", "url": "https://www.uniprot.org/uniprotkb/F4K9D0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M034-1", "url": "https://www.uniprot.org/uniprotkb/Q9M034-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGTGSDSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTPVEEILTIEIKPGWKKGTKITFLEKGNEHRGVIPSDLVFIVDEKPHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKGEGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRMLSP", "length": 335, "header": "tr|Q9M034-1|Q9M034_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M034-1" }, "isoforms": [ { "isoform_ac": "B3H6P7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M034/entry#B3H6P7-1", "sequence": { "sequence": "MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGTGSDSRAGPSGFRRPTPVEEILTIEIKPGWKKGTKITFLEKGNEHRGVIPSDLVFIVDEKPHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKGEGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRMLSP", "length": 277, "header": "tr|B3H6P7-1|Q9M034_ARATH Computationally mapped isoform of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M034-1" }, "locus": { "chromosome": "5", "start_pos": 160264, "end_pos": 162299, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G01390.2", "url": "https://www.ensemblgenomes.org/id/AT5G01390.2" }, { "database": "Ensembl Peptide", "id": "AT5G01390.2", "url": "https://www.ensemblgenomes.org/id/AT5G01390.2" } ] } }, { "isoform_ac": "F4K9C8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M034/entry#F4K9C8-1", "sequence": { "sequence": "MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGTGSDSRAGPSGFRRPTPVEEILTIEIKPGWKKGTKITFLEKVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKGEGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRMLSP", "length": 238, "header": "tr|F4K9C8-1|F4K9C8_ARATH Computationally mapped isoform of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M034-1" }, "locus": { "chromosome": "5", "start_pos": 160264, "end_pos": 162299, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G01390.3", "url": "https://www.ensemblgenomes.org/id/AT5G01390.3" }, { "database": "Ensembl Peptide", "id": "AT5G01390.3", "url": "https://www.ensemblgenomes.org/id/AT5G01390.3" } ] } }, { "isoform_ac": "F4K9D0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M034/entry#F4K9D0-1", "sequence": { "sequence": "MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGTGSDSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGFVFPLMITHLAFSRGIYLLLLANFFLEQFKLSFCGVWFQMFSL", "length": 233, "header": "tr|F4K9D0-1|F4K9D0_ARATH Computationally mapped isoform of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9M034-1" }, "locus": { "chromosome": "5", "start_pos": 160173, "end_pos": 162354, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G01390.4", "url": "https://www.ensemblgenomes.org/id/AT5G01390.4" }, { "database": "Ensembl Peptide", "id": "AT5G01390.4", "url": "https://www.ensemblgenomes.org/id/AT5G01390.4" } ] } }, { "isoform_ac": "Q9M034-1", "url": "https://www.uniprot.org/uniprotkb/Q9M034/entry#Q9M034-1", "sequence": { "sequence": "MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGTGSDSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTPVEEILTIEIKPGWKKGTKITFLEKGNEHRGVIPSDLVFIVDEKPHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKGEGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRMLSP", "length": 335, "header": "tr|Q9M034-1|Q9M034_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M034-1" }, "locus": { "chromosome": "5", "start_pos": 160158, "end_pos": 162340, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G01390.1", "url": "https://www.ensemblgenomes.org/id/AT5G01390.1" }, { "database": "Ensembl Peptide", "id": "AT5G01390.1", "url": "https://www.ensemblgenomes.org/id/AT5G01390.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "B3H6P7", "url": "https://www.uniprot.org/uniprotkb/B3H6P7" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H6P7", "url": "https://www.uniprot.org/uniprotkb/B3H6P7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G01390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G01390", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "unfolded protein binding", "id": "GO:0051082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051082", "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "pmid": "" }, { "name": "protein-folding chaperone binding", "id": "GO:0051087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051087", "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9M034", "url": "https://www.uniprot.org/uniprotkb/Q9M034" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M034", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M034" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 70, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LYZ4-1", "uniprot_ac": "Q9LYZ4", "uniprot_id": "FBL79_ARATH", "mass": { "chemical_mass": 51846.0, "monoisotopic_mass": 51846.0 }, "refseq": {}, "gene_names": [ { "name": "F9G14.220", "type": "synonym", "evidence": [ { "id": "Q9LYZ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4" } ] }, { "name": "F9G14_220", "type": "synonym", "evidence": [ { "id": "Q9LYZ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4" } ] } ], "protein_names": [ { "name": "F-box/LRR-repeat protein At5g02910", "type": "recommended", "evidence": [ { "id": "Q9LYZ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4", "locus": {} } ], "crossref": [ { "id": "Q9LYZ4", "url": "https://alphafold.ebi.ac.uk/entry/Q9LYZ4", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT5G02910", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G02910", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "831746", "url": "https://www.ncbi.nlm.nih.gov/gene/831746", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044997", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044997", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G02910", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02910", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VDTWIEF", "url": "https://omabrowser.org/oma/group/VDTWIEF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LYZ4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LYZ4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT5G02910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G02910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A178U7Y7", "url": "https://www.uniprot.org/uniprotkb/A0A178U7Y7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A178U7Y7-1", "url": "https://www.uniprot.org/uniprotkb/A0A178U7Y7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4KDV0", "url": "https://www.uniprot.org/uniprotkb/F4KDV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4KDV0-1", "url": "https://www.uniprot.org/uniprotkb/F4KDV0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYZ4", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MITGDSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSLESRDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKILSGSPLLESLELLYCAEYMCLDLSQSQHLRRLEIDRSDWFMGPTKIVAPHLHCLRLRHSRLPCSLVDVSSLTEADLNIYFGDLKTVTAGFLQHNVVKMLQMLQNVEKLTIGGTFLQMLSLAALCGVPFPTLKVKTLTLETMIIRSVIPGITKLLRYTPGLRKLTIHTVKCSSISELHLNDYLRKHSLNQRQCWRSKDSVFPGSLETISMLASKHAESNLVALFMERLLKSTKSLETMVVLLVDYLDALGFEELLAMATTLSHNNDVSVLIKRSYIKYVSNTFPQR", "length": 458, "header": "sp|Q9LYZ4-1|FBL79_ARATH Isoform 1 of F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LYZ4-1" }, "isoforms": [ { "isoform_ac": "A0A178U7Y7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4/entry#A0A178U7Y7-1", "sequence": { "sequence": "MITGDSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSLESRDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKILSGSPLLESLELLYCAEYMCLDLSQSQHLRRLEIDRSDWFMGPTKIVAPHLHCLRLRHSRLPCSLVDVSSLTEADLNIYFGDLKTVTAGFLQHNVVKMLQMLQNVEKLTIGGTFLQMLSLAALCGVPFPTLKVKTLTLETMIIRSVIPGITKLLRYTPGLRKLTIHTVKCSSISVGIFTMKPLLLSFTYMIIVTMTK", "length": 370, "header": "tr|A0A178U7Y7-1|A0A178U7Y7_ARATH Computationally mapped isoform of F-box/RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYZ4-1" }, "locus": { "chromosome": "5", "start_pos": 677031, "end_pos": 679065, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02910.3", "url": "https://www.ensemblgenomes.org/id/AT5G02910.3" }, { "database": "Ensembl Peptide", "id": "AT5G02910.3", "url": "https://www.ensemblgenomes.org/id/AT5G02910.3" } ] } }, { "isoform_ac": "F4KDV0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4/entry#F4KDV0-1", "sequence": { "sequence": "MITGDSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSLESRDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKILSGSPLLESLELLYCAEYMCLDLSQSQHLRRLEIDRSDWFMGPTKIVAPHLHCLRLRHSRLPCSLVDVSSLTEADLNIYFGDLKTVTAGFLQHNVVKMLQMLQNVEKLTIGGTFLQMLSLAALCGVPFPTLKVKTLTLETMIIRSVIPGITKLLRYTPGLRKLTIHTVKCSSISVGIASQ", "length": 353, "header": "tr|F4KDV0-1|FBL79_ARATH Computationally mapped isoform of F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LYZ4-1" }, "locus": { "chromosome": "5", "start_pos": 677068, "end_pos": 679263, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02910.2", "url": "https://www.ensemblgenomes.org/id/AT5G02910.2" }, { "database": "Ensembl Peptide", "id": "AT5G02910.2", "url": "https://www.ensemblgenomes.org/id/AT5G02910.2" } ] } }, { "isoform_ac": "Q9LYZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4/entry#Q9LYZ4-1", "sequence": { "sequence": "MITGDSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSLESRDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKILSGSPLLESLELLYCAEYMCLDLSQSQHLRRLEIDRSDWFMGPTKIVAPHLHCLRLRHSRLPCSLVDVSSLTEADLNIYFGDLKTVTAGFLQHNVVKMLQMLQNVEKLTIGGTFLQMLSLAALCGVPFPTLKVKTLTLETMIIRSVIPGITKLLRYTPGLRKLTIHTVKCSSISELHLNDYLRKHSLNQRQCWRSKDSVFPGSLETISMLASKHAESNLVALFMERLLKSTKSLETMVVLLVDYLDALGFEELLAMATTLSHNNDVSVLIKRSYIKYVSNTFPQR", "length": 458, "header": "sp|Q9LYZ4-1|FBL79_ARATH Isoform 1 of F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LYZ4-1" }, "locus": { "chromosome": "5", "start_pos": 677031, "end_pos": 679065, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02910.1", "url": "https://www.ensemblgenomes.org/id/AT5G02910.1" }, { "database": "Ensembl Peptide", "id": "AT5G02910.1", "url": "https://www.ensemblgenomes.org/id/AT5G02910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "F4KDV0", "url": "https://www.uniprot.org/uniprotkb/F4KDV0" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "F4KDV0", "url": "https://www.uniprot.org/uniprotkb/F4KDV0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 129, "end_pos": 131, "annotation": "n_glycosylation_sequon" }, { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 162, "end_pos": 164, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LYZ4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 458, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LYZ4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LYZ4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYZ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYZ4" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 10, "end_pos": 56, "start_aa": "Met", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 129, "end_pos": 131 }, { "start_pos": 157, "end_pos": 159 }, { "start_pos": 162, "end_pos": 164 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LX28-1", "uniprot_ac": "Q9LX28", "uniprot_id": "Q9LX28_ARATH", "mass": { "chemical_mass": 49480.0, "monoisotopic_mass": 49480.0 }, "refseq": { "ac": "NP_001319797", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319797" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LX28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX28/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001319797", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319797" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LX28", "url": "https://www.uniprot.org/uniprotkb/Q9LX28" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LX28", "locus": {} } ], "crossref": [ { "id": "AT3G59430", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59430", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825112", "url": "https://www.ncbi.nlm.nih.gov/gene/825112", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G59430", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59430", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PCKETNG", "url": "https://omabrowser.org/oma/group/PCKETNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36376", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36376", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36376:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36376:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001319797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319797", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59430", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59430", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q2V3N1", "url": "https://www.uniprot.org/uniprotkb/Q2V3N1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q2V3N1-1", "url": "https://www.uniprot.org/uniprotkb/Q2V3N1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX28", "url": "https://www.uniprot.org/uniprotkb/Q9LX28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX28-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX28-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRKEDVDFYCGFSRKELQSLCKKYNLPANRSSSDMAESLASYFEKNNLNPVSFGVPGNQDSSATTSRAPAIRTWNVKRDSYGNKLDVPREDYVQGAVAREPGIILGNNTPYQERNGNDGLIDFTSAPPYMRKLNEKGPTANSKRADSRLENRMRDVDSGDNPSSSSFEFHVSLEEGISLSVDLNFNPSDWINSMRDEVNVCDSMRRRKSPHSDLGITECKKQKSSGQDTDGHVRRESSLSPPMKDNAHLPSDHHPNGERSLASSAIEPCNRIKESSDTCKEKSGLNLSIPDSSGPCQIASSCVESYSKSCCVNPVDLDCIIPPGKKLASESDMVAAEQNHSAGDLLVEIPKNPSMESFQIVGNSSTVICPRGAGSELSSSEAEAYHSNQPCSPRKTSRSSTISSPEFIIDRESTSYSESFKFRCNGGKSLPPNTEEQEKSEVLSEQARSE", "length": 451, "header": "tr|Q9LX28-1|Q9LX28_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LX28-1" }, "isoforms": [ { "isoform_ac": "Q2V3N1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX28/entry#Q2V3N1-1", "sequence": { "sequence": "MFLWKMQERNGNDGLIDFTSAPPYMRKLNEKGPTANSKRADSRLENRMRDVDSGDNPSSSSFEFHVSLEEGISLSVDLNFNPSDWINSMRDEVNVCDSMRRRKSPHSDLGITECKKQKSSGQDTDGHVRRESSLSPPMKDNAHLPSDHHPNGERSLASSAIEPCNRIKESSDTCKEKSGLNLSIPDSSGPCQIASSCVESYSKSCCVNPVDLDCIIPPGKKLASESDMVAAEQNHSAGDLLVEIPKNPSMESFQIVGNSSTVICPRGAGSELSSSEAEAYHSNQPCSPRKTSRSSTISSPEFIIDRESTSYSESFKFRCNGGKSLPPNTEEQEKSEVLSEQARSE", "length": 345, "header": "tr|Q2V3N1-1|Q9LX28_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LX28-1" }, "locus": { "chromosome": "3", "start_pos": 21963990, "end_pos": 21966528, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59430.5", "url": "https://www.ensemblgenomes.org/id/AT3G59430.5" }, { "database": "Ensembl Peptide", "id": "AT3G59430.5", "url": "https://www.ensemblgenomes.org/id/AT3G59430.5" } ] } }, { "isoform_ac": "Q9LX28-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX28/entry#Q9LX28-1", "sequence": { "sequence": "MVRKEDVDFYCGFSRKELQSLCKKYNLPANRSSSDMAESLASYFEKNNLNPVSFGVPGNQDSSATTSRAPAIRTWNVKRDSYGNKLDVPREDYVQGAVAREPGIILGNNTPYQERNGNDGLIDFTSAPPYMRKLNEKGPTANSKRADSRLENRMRDVDSGDNPSSSSFEFHVSLEEGISLSVDLNFNPSDWINSMRDEVNVCDSMRRRKSPHSDLGITECKKQKSSGQDTDGHVRRESSLSPPMKDNAHLPSDHHPNGERSLASSAIEPCNRIKESSDTCKEKSGLNLSIPDSSGPCQIASSCVESYSKSCCVNPVDLDCIIPPGKKLASESDMVAAEQNHSAGDLLVEIPKNPSMESFQIVGNSSTVICPRGAGSELSSSEAEAYHSNQPCSPRKTSRSSTISSPEFIIDRESTSYSESFKFRCNGGKSLPPNTEEQEKSEVLSEQARSE", "length": 451, "header": "tr|Q9LX28-1|Q9LX28_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LX28-1" }, "locus": { "chromosome": "3", "start_pos": 21964065, "end_pos": 21966916, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59430.7", "url": "https://www.ensemblgenomes.org/id/AT3G59430.7" }, { "database": "Ensembl Peptide", "id": "AT3G59430.7", "url": "https://www.ensemblgenomes.org/id/AT3G59430.7" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 210, "end_pos": 210, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q2V3N1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q2V3N1" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser210" }, { "start_pos": 230, "end_pos": 230, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q2V3N1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q2V3N1" } ], "site_lbl": "Thr230" }, { "start_pos": 393, "end_pos": 393, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q2V3N1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q2V3N1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser393" }, { "start_pos": 42, "end_pos": 42, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q2V3N1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q2V3N1" } ], "site_lbl": "Ser42" }, { "start_pos": 450, "end_pos": 450, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q2V3N1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q2V3N1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser450" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, 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cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3", "locus": {} } ], "crossref": [ { "id": "AT3G51750", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G51750", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824338", "url": "https://www.ncbi.nlm.nih.gov/gene/824338", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G51750", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51750", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MSDIANF", "url": "https://omabrowser.org/oma/group/MSDIANF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_001190057", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190057", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51750", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51750", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q3EAL8", "url": "https://www.uniprot.org/uniprotkb/Q3EAL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q3EAL8-1", "url": "https://www.uniprot.org/uniprotkb/Q3EAL8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCT3", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCT3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEDVPEAEKLMCPKEVVEKNKDKQEEEEDEKGAKGGILNNLISNFMDCTTTTVEGKSSENIQKSLCEDEDEKEQESPSVGILEKIISHLPEDVAPTTDEAAILIHSAID", "length": 110, "header": "tr|Q9SCT3-1|Q9SCT3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT3-1" }, "isoforms": [ { "isoform_ac": "Q3EAL8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3/entry#Q3EAL8-1", "sequence": { "sequence": "MEEDVPEAEKLMCPKEVVEKNKDKQEEEEDEKGAKGGILNNLISNFMDCTTTTVEGKSSENIQKSLCEDEDEKEQESPSVGILEKIISHLPDVAPTTDEAAILIHSAID", "length": 109, "header": "tr|Q3EAL8-1|Q9SCT3_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT3-1" }, "locus": { "chromosome": "3", "start_pos": 19196503, "end_pos": 19197334, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51750.2", "url": "https://www.ensemblgenomes.org/id/AT3G51750.2" }, { "database": "Ensembl Peptide", "id": "AT3G51750.2", "url": "https://www.ensemblgenomes.org/id/AT3G51750.2" } ] } }, { "isoform_ac": "Q9SCT3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3/entry#Q9SCT3-1", "sequence": { "sequence": "MEEDVPEAEKLMCPKEVVEKNKDKQEEEEDEKGAKGGILNNLISNFMDCTTTTVEGKSSENIQKSLCEDEDEKEQESPSVGILEKIISHLPEDVAPTTDEAAILIHSAID", "length": 110, "header": "tr|Q9SCT3-1|Q9SCT3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT3-1" }, "locus": { "chromosome": "3", "start_pos": 19196362, "end_pos": 19197356, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51750.3", "url": "https://www.ensemblgenomes.org/id/AT3G51750.3" }, { "database": "Ensembl Peptide", "id": "AT3G51750.3", "url": "https://www.ensemblgenomes.org/id/AT3G51750.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 79, "end_pos": 79, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCT3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCT3" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser79" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q3EAL8", "url": "https://www.uniprot.org/uniprotkb/Q3EAL8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3EAL8", "url": "https://www.uniprot.org/uniprotkb/Q3EAL8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SCT3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCT3" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G51750", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51750", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT3", "url": "https://www.uniprot.org/uniprotkb/Q9SCT3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 79 ], "sequon_annotation_sites": [] }, "class_list": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LUV9-1", "uniprot_ac": "Q9LUV9", "uniprot_id": "Q9LUV9_ARATH", "mass": { "chemical_mass": 45277.0, "monoisotopic_mass": 45277.0 }, "refseq": { "ac": "NP_188880", "name": "Sec14p-like phosphatidylinositol transfer family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188880" }, "gene_names": [], "protein_names": [ { "name": "Sec14p-like phosphatidylinositol transfer family protein", "type": "synonym", "evidence": [ { "id": "NP_188880", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188880" }, { "id": "Q9LUV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUV9", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9", "locus": {} } ], "crossref": [ { "id": "AT3G22410", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G22410", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00170", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00170", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821809", "url": "https://www.ncbi.nlm.nih.gov/gene/821809", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LUV9", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LUV9*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036273", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G22410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G22410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IIFRFKH", "url": "https://omabrowser.org/oma/group/IIFRFKH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47104", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47104", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47104:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47104:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188880", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G22410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G22410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LUV9", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LUV9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKKDEKVEAVLRLVKKQSPLTFKQEKFCNRECVERFLKVKGDNVKKAAKQLSSCLSWRQNFDIERLGAEEFSTELSDGVAYISGHDRESRPVIIFRFKHDYQKLHTQKQFTRLVAFTIETAISSMSRNTEQSFVLLFDASFFRSSSAFANLLLATLKIIADNYPCRLYKAFIIDPPSFFSYLWKGVRPFVELSTATMILSSLDYDEPLDITHVSSNPRSTSLRFDASSIKSTASIGSASSRFAFTVSQNSLKPWYLSFTDTSPYNPAVSSSAAAPVSPLSARSLPFASPAVRGFKDAKPAACRKSLFPSTPLPEKTKTVSYRKTPRPSFFQSPAMFFRRENNVGGGGEKSREAFVPYLKFYRRPYDETAYRSKLRGPRGFLSVVSSHRRSRHVSLSQRF", "length": 400, "header": "tr|Q9LUV9-1|Q9LUV9_ARATH Isoform 1 of Sec14p-like phosphatidylinositol transfer family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUV9-1" }, "isoforms": [ { "isoform_ac": "Q9LUV9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LUV9/entry#Q9LUV9-1", "sequence": { "sequence": "MGKKDEKVEAVLRLVKKQSPLTFKQEKFCNRECVERFLKVKGDNVKKAAKQLSSCLSWRQNFDIERLGAEEFSTELSDGVAYISGHDRESRPVIIFRFKHDYQKLHTQKQFTRLVAFTIETAISSMSRNTEQSFVLLFDASFFRSSSAFANLLLATLKIIADNYPCRLYKAFIIDPPSFFSYLWKGVRPFVELSTATMILSSLDYDEPLDITHVSSNPRSTSLRFDASSIKSTASIGSASSRFAFTVSQNSLKPWYLSFTDTSPYNPAVSSSAAAPVSPLSARSLPFASPAVRGFKDAKPAACRKSLFPSTPLPEKTKTVSYRKTPRPSFFQSPAMFFRRENNVGGGGEKSREAFVPYLKFYRRPYDETAYRSKLRGPRGFLSVVSSHRRSRHVSLSQRF", "length": 400, "header": "tr|Q9LUV9-1|Q9LUV9_ARATH Isoform 1 of Sec14p-like phosphatidylinositol transfer family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LUV9-1" }, "locus": { "chromosome": "3", "start_pos": 7933119, "end_pos": 7935925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G22410.1", "url": "https://www.ensemblgenomes.org/id/AT3G22410.1" }, { "database": "Ensembl Peptide", "id": "AT3G22410.1", "url": "https://www.ensemblgenomes.org/id/AT3G22410.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 306, 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"mass": { "chemical_mass": 27640.0, "monoisotopic_mass": 27640.0 }, "refseq": { "ac": "NP_566601", "name": "transmembrane protein, putative (Protein of unknown function, DUF599)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566601" }, "gene_names": [], "protein_names": [ { "name": "Transmembrane protein", "type": "recommended", "evidence": [ { "id": "Q9LV18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV18/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein, putative (Protein of unknown function, DUF599)", "type": "synonym", "evidence": [ { "id": "NP_566601", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566601" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV18", "url": "https://www.uniprot.org/uniprotkb/Q9LV18" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LV18", "locus": {} } ], "crossref": [ { "id": "AT3G18215", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G18215", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821349", "url": "https://www.ncbi.nlm.nih.gov/gene/821349", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LV18", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LV18*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR006747", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006747", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18215", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18215", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VCCCIMS", "url": "https://omabrowser.org/oma/group/VCCCIMS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LLB8", "url": "https://www.orthodb.org/?gene=A0A1I9LLB8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LV18", "url": "https://www.orthodb.org/?gene=Q9LV18", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31168", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31168", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31168:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31168:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04654", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04654", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566601", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566601", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18215", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18215", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLB8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLB8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV18", "url": "https://www.uniprot.org/uniprotkb/Q9LV18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV18-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV18-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWTEESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAFYFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSFTRHLHSQSFRETADSMDGEIESAVHTL", "length": 244, "header": "tr|Q9LV18-1|Q9LV18_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV18-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLB8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV18/entry#A0A1I9LLB8-1", "sequence": { "sequence": "MASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAFYFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSFTRHLHSQSFRETADSMDGEIESAVHTL", "length": 172, "header": "tr|A0A1I9LLB8-1|A0A1I9LLB8_ARATH Computationally mapped isoform of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV18-1" }, "locus": { "chromosome": "3", "start_pos": 6240769, "end_pos": 6243078, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18215.2", "url": "https://www.ensemblgenomes.org/id/AT3G18215.2" }, { "database": "Ensembl Peptide", "id": "AT3G18215.2", "url": "https://www.ensemblgenomes.org/id/AT3G18215.2" } ] } }, { "isoform_ac": "Q9LV18-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV18/entry#Q9LV18-1", "sequence": { "sequence": "MWTEESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAFYFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSFTRHLHSQSFRETADSMDGEIESAVHTL", "length": 244, "header": "tr|Q9LV18-1|Q9LV18_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV18-1" }, "locus": { "chromosome": "3", "start_pos": 6240769, "end_pos": 6243078, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18215.1", "url": "https://www.ensemblgenomes.org/id/AT3G18215.1" }, { "database": "Ensembl Peptide", "id": "AT3G18215.1", "url": "https://www.ensemblgenomes.org/id/AT3G18215.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LV18", "url": "https://www.uniprot.org/uniprotkb/Q9LV18" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV18", "url": "https://www.uniprot.org/uniprotkb/Q9LV18" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18215", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18215", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 60, "end_pos": 62, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 60, "end_pos": 62 }, { "start_pos": 95, "end_pos": 97 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LV22-1", "uniprot_ac": "Q9LV22", "uniprot_id": "Q9LV22_ARATH", "mass": { "chemical_mass": 53188.0, "monoisotopic_mass": 53188.0 }, "refseq": { "ac": "NP_188446", "name": "Glycosyltransferase family 61 protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188446" }, "gene_names": [], "protein_names": [ { "name": "Glycosyltransferase family 61 protein", "type": "synonym", "evidence": [ { "id": "NP_188446", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188446" }, { "id": "Q9LV22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV22/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LV22", "locus": {} } ], "crossref": [ { "id": "AT3G18180", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G18180", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821345", "url": "https://www.ncbi.nlm.nih.gov/gene/821345", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007657", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007657", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEKPICH", "url": "https://omabrowser.org/oma/group/MEKPICH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR20961", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20961", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20961:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20961:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04577", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04577", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188446", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV22-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKKDILYDTVLARSFSKTDQKRLCCGAFIASLLLVLTLCTVVKPYLSPLPIVELQLSVGTGLRMLSITELTTNTTISKEEVISECNKMEKPICHCNTLGSKEFCDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPAMKRVREWTVKLVQNASLSRCVRNHSVPAILFSLGGFSLNNFHDFTDIVIPLYTTARRFSGEVQFLVTNKNLLWINKFKELVRKLSNYEVIYIDEEDETHCFSSVIVGLNRHRDYDKELTTDPSNSEYSMSDFRKFLRDTYSLRNSAVTTRRKPRILILSRSRSRAFVNAGEIARAARQIGFKVVVAEANTEIASFAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILPIGGFEWLAKMDFEYPSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTFKSVYLVQQNVSVDINRFKLVLVKALELLHNQSV", "length": 470, "header": "tr|Q9LV22-1|Q9LV22_ARATH Isoform 1 of Glycosyltransferase family 61 protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV22-1" }, "isoforms": [ { "isoform_ac": "Q9LV22-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV22/entry#Q9LV22-1", "sequence": { "sequence": "MTKKDILYDTVLARSFSKTDQKRLCCGAFIASLLLVLTLCTVVKPYLSPLPIVELQLSVGTGLRMLSITELTTNTTISKEEVISECNKMEKPICHCNTLGSKEFCDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPAMKRVREWTVKLVQNASLSRCVRNHSVPAILFSLGGFSLNNFHDFTDIVIPLYTTARRFSGEVQFLVTNKNLLWINKFKELVRKLSNYEVIYIDEEDETHCFSSVIVGLNRHRDYDKELTTDPSNSEYSMSDFRKFLRDTYSLRNSAVTTRRKPRILILSRSRSRAFVNAGEIARAARQIGFKVVVAEANTEIASFAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILPIGGFEWLAKMDFEYPSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTFKSVYLVQQNVSVDINRFKLVLVKALELLHNQSV", "length": 470, "header": "tr|Q9LV22-1|Q9LV22_ARATH Isoform 1 of Glycosyltransferase family 61 protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV22-1" }, "locus": { "chromosome": "3", "start_pos": 6230270, "end_pos": 6231878, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18180.1", "url": "https://www.ensemblgenomes.org/id/AT3G18180.1" }, { "database": "Ensembl Peptide", "id": "AT3G18180.1", "url": "https://www.ensemblgenomes.org/id/AT3G18180.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 292, "end_pos": 292, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" } ], "site_lbl": "Ser292" }, { "start_pos": 67, "end_pos": 67, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ], "site_lbl": "Ser67" }, { "start_pos": 69, "end_pos": 69, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ], "site_lbl": "Thr69" }, { "start_pos": 72, "end_pos": 72, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ], "site_lbl": "Thr72" }, { "start_pos": 73, "end_pos": 73, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ], "site_lbl": "Thr73" }, { "start_pos": 78, "end_pos": 78, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser78" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-10", "authors": "Wu Xu Na, Sanchez Rodriguez Clara, Pertl-Obermeyer Heidi, Obermeyer Gerhard, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LV22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LV22" } ], "reference": [ { "type": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18180", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "glycosyltransferase activity", "id": "GO:0016757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016757", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "pmid": "" }, { "name": "pentosyltransferase activity", "id": "GO:0016763", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016763", "evidence": [ { "database": "UniProtKB", "id": "Q9LV22", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 131, "end_pos": 133, "annotation": "n_glycosylation_sequon" }, { "start_pos": 161, "end_pos": 163, "annotation": "n_glycosylation_sequon" }, { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 446, "end_pos": 448, "annotation": "n_glycosylation_sequon" }, { "start_pos": 467, "end_pos": 469, "annotation": "n_glycosylation_sequon" }, { "start_pos": 74, "end_pos": 76, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LV22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV22" }, { "id": "PF04577", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04577" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glycosyltransferase 61 catalytic", "eco_id": "ECO_0000259", "start_pos": 274, "end_pos": 373, "start_aa": "Tyr", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 67, 69, 72, 73, 78, 292 ], "sequon_annotation_sites": [ { "start_pos": 131, "end_pos": 133 }, { "start_pos": 161, "end_pos": 163 }, { "start_pos": 170, "end_pos": 172 }, { "start_pos": 446, "end_pos": 448 }, { "start_pos": 467, "end_pos": 469 }, { "start_pos": 74, "end_pos": 76 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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"field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LV23-1", "uniprot_ac": "Q9LV23", "uniprot_id": "Q9LV23_ARATH", "mass": { "chemical_mass": 60812.0, "monoisotopic_mass": 60812.0 }, "refseq": { "ac": "NP_001326302", "name": "Glycosyltransferase family 61 protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326302" }, "gene_names": [], "protein_names": [ { "name": "Glycosyltransferase family 61 protein", "type": "synonym", "evidence": [ { "id": "NP_001326302", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326302" }, { "id": "Q9LV23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV23/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV23", "url": "https://www.uniprot.org/uniprotkb/Q9LV23" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LV23", "locus": {} } ], "crossref": [ { "id": "AT3G18170", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G18170", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821344", "url": "https://www.ncbi.nlm.nih.gov/gene/821344", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007657", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007657", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049625", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049625", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR20961", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20961", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20961:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20961:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04577", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04577", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001326302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326302", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18170", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV23", "url": "https://www.uniprot.org/uniprotkb/Q9LV23", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV23-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV23-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTEKDLLFDTILARSFIRNEPKRLGYGAFIASLLFVFTLCTVFKPYLSPLPIVEMQLSVDAGLRMLRITEPQALRSSNDETSADSDKLIIPTNQDNVTSSEIITQSLTSSEDHKLNDTSMPKNYLDSFNYTTNTTISKEEVISDENKLEKTMKPICTKLARTEFCELNGDVRVHGKSATVSAAITFAFSGNSTWHIRPYARKGDTVAMKRVREWTVKLEQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFHDFTDIVIPLYTTARRFNGEVQFLVTNKSPSWINKFKELVRKLSNYEVIYIDEEDETHCFSSVTVGLTRHREYFKELTIDPSNSEYSMSDFRSFLRDTYSLRNDAVATRQIRRRRPRILILARGRSRAFVNTGEIARAARQIGFKVVVAEANIGIAKFAQTVNSCDVMLGVHGAGLTNMVFLPENAVVIQVLPIGGFEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYGRDHEIVRDPSAVAKHGWEMFKSVYLVQQNVSIDINRFKPVLVKALELL", "length": 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"Protein" ] }, { "id": "AT3G18120", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18120", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV29", "url": "https://www.uniprot.org/uniprotkb/Q9LV29", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV29-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV29-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNITIPNINSANWEIQFSARGVSLKGNTQQKHLPEFLLCYDFTREIFGPPLSLPFHSFNEDTVTLSSVRDEQLTVLFERDDTLQMEIWITTKIEPETASWSKLFLAVGMEPLTGLQFQVAAGNFFVDEEKKVVVFLDKDTETRERYIAFITHVSVLMFQV", "length": 160, "header": "tr|Q9LV29-1|Q9LV29_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV29-1" }, "isoforms": [ { "isoform_ac": "Q9LV29-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV29/entry#Q9LV29-1", "sequence": { "sequence": "MNITIPNINSANWEIQFSARGVSLKGNTQQKHLPEFLLCYDFTREIFGPPLSLPFHSFNEDTVTLSSVRDEQLTVLFERDDTLQMEIWITTKIEPETASWSKLFLAVGMEPLTGLQFQVAAGNFFVDEEKKVVVFLDKDTETRERYIAFITHVSVLMFQV", "length": 160, "header": "tr|Q9LV29-1|Q9LV29_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV29-1" }, "locus": { "chromosome": "3", "start_pos": 6210090, "end_pos": 6210572, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G18120.1", "url": "https://www.ensemblgenomes.org/id/AT3G18120.1" }, { "database": "Ensembl Peptide", "id": "AT3G18120.1", "url": "https://www.ensemblgenomes.org/id/AT3G18120.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LV29", "url": "https://www.uniprot.org/uniprotkb/Q9LV29" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV29", "url": "https://www.uniprot.org/uniprotkb/Q9LV29" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G18120", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18120", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LV29", "url": "https://www.uniprot.org/uniprotkb/Q9LV29" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 2, "end_pos": 4, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], 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"crossref": [ { "id": "821330", "url": "https://www.ncbi.nlm.nih.gov/gene/821330", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR040376", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040376", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043891", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043891", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G18050", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G18050", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ETDCLSG", "url": "https://omabrowser.org/oma/group/ETDCLSG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LV36", "url": "https://www.orthodb.org/?gene=Q9LV36", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34056", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34056", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34056:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34056:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF19160", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566596", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G18050", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G18050", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV36", "url": "https://www.uniprot.org/uniprotkb/Q9LV36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV36-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV36-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"https://alphafold.ebi.ac.uk/entry/Q9LV41", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G24610", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G24610", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22152", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22152", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "822057", "url": "https://www.ncbi.nlm.nih.gov/gene/822057", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050354", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050354", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G24610", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24610", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WCEAGEL", "url": "https://omabrowser.org/oma/group/WCEAGEL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414:SF154", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414:SF154", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25210", "url": 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"MSNEAPEVEPHSKRRKKEASPSSSSGFLQSLPEAVAMICLARVSRLDHAALSLVSKSCRSMVLSPELYQTRSLIGYAEKFLYVCFCMPTDETLCCHEKINGNRSLNVLFLDCRSHKWHHVTSMRVARVSPEVSVVDGKINVWGGCKYKHYYDWGEVFDPKTQTWADMSIPKPVREEKIYVVDSWDVGSYYYLPSKSIWEKGNQDSKRSKDWCLIDKLIYSCGNDGGIYWCEAGELDWCDAVGIDWREVFGLEFLSKELRESRVVYFGGKMVKVWESYKIMYNISLNLEELLPETQLTNLTELGHNVLVFWEKLECCCDGFKILEIWCAEISLERWEGGEILGRCDWCHPILAINLLTVDPLFYHSMVLYSIPVDV", "length": 375, "header": "sp|Q9LV41-1|FBK68_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At3g24610 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV41-1" }, "isoforms": [ { "isoform_ac": "Q9LV41-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV41/entry#Q9LV41-1", "sequence": { "sequence": 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"Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Kaneko T, Katoh T, Sato S, Nakamura A, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LV41", "url": "https://www.uniprot.org/uniprotkb/Q9LV41" } ], "reference": [ { "type": "PubMed", "id": "10907853", "url": "https://glygen.org/publication/PubMed/10907853" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV41", "url": "https://www.uniprot.org/uniprotkb/Q9LV41" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G24610", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24610", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LV41", "url": "https://www.uniprot.org/uniprotkb/Q9LV41" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 102, "end_pos": 104, "annotation": "n_glycosylation_sequon" }, { "start_pos": 282, "end_pos": 284, "annotation": "n_glycosylation_sequon" }, { "start_pos": 298, "end_pos": 300, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LV41-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 375, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", 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"phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LV42-1", "uniprot_ac": "Q9LV42", "uniprot_id": "Q9LV42_ARATH", "mass": { "chemical_mass": 32716.0, "monoisotopic_mass": 32716.0 }, "refseq": { "ac": "NP_001326030", "name": "late embryogenesis abundant protein, group 2", "summary": "", "url": 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"locus": {} } ], "crossref": [ { "id": "AT3G24605", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G24605", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "28719315", "url": "https://www.ncbi.nlm.nih.gov/gene/28719315", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR055276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G24605", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24605", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MHEKSET", "url": "https://omabrowser.org/oma/group/MHEKSET/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR48436", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48436", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48436:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48436:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001326030", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326030", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G24605", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G24605", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV42", "url": "https://www.uniprot.org/uniprotkb/Q9LV42", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV42-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV42-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKMYPKSDSDVTSLDLSSPKRPTYYVQSPSRDSDKSSSVALTTHQTTPTESPSHPSIASRVSNGGGGGFRWKGRRKYHGGIWWPADKEEGGDGRYEDLYEDNRGVSIVTCRLILGVVATLSIFFLLCSVLFGASQSSPPIVYIKGVNVRSFYYGEGSDNTGVPTKIMNVKCSVVITTHNPSTLFGIHVSSTAVSLIYSRQFTLANARLKSYHQPKQSNHTSRINLIGSKVPLYGAGAELVASDNSGGVPVKLEFEIRSRANIVGNLVKSRHRKHLSCFFFISSYNTTFVKFTHKTCIS", "length": 298, "header": "tr|Q9LV42-1|Q9LV42_ARATH Isoform 1 of Late embryogenesis abundant protein, group 2 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV42-1" }, "isoforms": [ { "isoform_ac": "Q9LV42-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV42/entry#Q9LV42-1", "sequence": { "sequence": "MKMYPKSDSDVTSLDLSSPKRPTYYVQSPSRDSDKSSSVALTTHQTTPTESPSHPSIASRVSNGGGGGFRWKGRRKYHGGIWWPADKEEGGDGRYEDLYEDNRGVSIVTCRLILGVVATLSIFFLLCSVLFGASQSSPPIVYIKGVNVRSFYYGEGSDNTGVPTKIMNVKCSVVITTHNPSTLFGIHVSSTAVSLIYSRQFTLANARLKSYHQPKQSNHTSRINLIGSKVPLYGAGAELVASDNSGGVPVKLEFEIRSRANIVGNLVKSRHRKHLSCFFFISSYNTTFVKFTHKTCIS", "length": 298, "header": "tr|Q9LV42-1|Q9LV42_ARATH Isoform 1 of Late embryogenesis 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"https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050233", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050233", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G24580", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24580", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CIKPEGE", "url": "https://omabrowser.org/oma/group/CIKPEGE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47993:SF289", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47993:SF289", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LV45", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LV45", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_189101", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189101", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G24580", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G24580", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LV45", "url": "https://www.uniprot.org/uniprotkb/Q9LV45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV45-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKMSNLPNDLAEEVLSRVSLTSLRNVRLTCKDWNTLSKGESFAKNHLGYQAIVAAKEKEFMMVLMMDFRVYLIRVNVHNDIESCIKPEGELISLGDEVDVSQVFHCDGLLLCITEDNEDNAKVVLWNPYWGQTRWIESTNNFHKLDMYTYALGYKKSSKSSRSYKILRFIDFSPTCSEFKIYNINSDSWKVLDVSPDWKIDSYIRGVSLKGNTYWIARERHGYGHTFLVCFDFTRERFRSRLPLPSQPCVLDTVSLSSVREEQLAVLFQCSSTLEMQIWVTTKIEPNAVLWNSKVFLAVDMHSLKFQFQVRASSFFIDEEKRVVVVFDKEKRYLASSRNKAYIVGVDGTWEQVDLGMSVDKFVYPLVCSYVPSLVHF", "length": 378, "header": "sp|Q9LV45-1|FB184_ARATH Isoform 1 of Putative F-box protein At3g24580 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV45-1" }, "isoforms": [ { "isoform_ac": "Q9LV45-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV45/entry#Q9LV45-1", "sequence": { "sequence": "MTKMSNLPNDLAEEVLSRVSLTSLRNVRLTCKDWNTLSKGESFAKNHLGYQAIVAAKEKEFMMVLMMDFRVYLIRVNVHNDIESCIKPEGELISLGDEVDVSQVFHCDGLLLCITEDNEDNAKVVLWNPYWGQTRWIESTNNFHKLDMYTYALGYKKSSKSSRSYKILRFIDFSPTCSEFKIYNINSDSWKVLDVSPDWKIDSYIRGVSLKGNTYWIARERHGYGHTFLVCFDFTRERFRSRLPLPSQPCVLDTVSLSSVREEQLAVLFQCSSTLEMQIWVTTKIEPNAVLWNSKVFLAVDMHSLKFQFQVRASSFFIDEEKRVVVVFDKEKRYLASSRNKAYIVGVDGTWEQVDLGMSVDKFVYPLVCSYVPSLVHF", "length": 378, "header": "sp|Q9LV45-1|FB184_ARATH Isoform 1 of Putative F-box protein At3g24580 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LV45-1" }, "locus": { "chromosome": "3", "start_pos": 8969162, "end_pos": 8970298, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G24580.1", "url": "https://www.ensemblgenomes.org/id/AT3G24580.1" }, { "database": "Ensembl Peptide", "id": "AT3G24580.1", "url": "https://www.ensemblgenomes.org/id/AT3G24580.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones.", "journal": "DNA Res.", "date": "2000", "authors": "Kaneko T, Katoh T, Sato S, Nakamura A, Asamizu E, Tabata S", "evidence": [ { "database": "UniProtKB", "id": "Q9LV45", "url": "https://www.uniprot.org/uniprotkb/Q9LV45" } ], "reference": [ { "type": "PubMed", "id": "10907853", "url": "https://glygen.org/publication/PubMed/10907853" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV45", "url": "https://www.uniprot.org/uniprotkb/Q9LV45" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G24580", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24580", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LV45-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 378, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LV45-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LV45" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LV45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV45" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 47, "start_aa": "Met", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LV46-1", "uniprot_ac": "Q9LV46", "uniprot_id": "Q9LV46_ARATH", "mass": { "chemical_mass": 26954.0, "monoisotopic_mass": 26954.0 }, "refseq": { "ac": "NP_189100", "name": "Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189100" }, "gene_names": [], "protein_names": [ { "name": "Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein", "type": "synonym", "evidence": [ { "id": "NP_189100", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189100" }, { "id": "Q9LV46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV46/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV46", "url": "https://www.uniprot.org/uniprotkb/Q9LV46" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LV46", "locus": {} } ], "crossref": [ { "id": "AT3G24570", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G24570", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822053", "url": "https://www.ncbi.nlm.nih.gov/gene/822053", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LV46", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LV46*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR007248", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007248", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G24570", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24570", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WYQSKLA", "url": "https://omabrowser.org/oma/group/WYQSKLA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11266", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11266", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11266:SF111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11266:SF111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04117", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04117", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189100", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189100", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G24570", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G24570", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J7Q0", "url": "https://www.uniprot.org/uniprotkb/F4J7Q0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J7Q0-1", "url": "https://www.uniprot.org/uniprotkb/F4J7Q0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV46", "url": "https://www.uniprot.org/uniprotkb/Q9LV46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LV46-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV46-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV", "length": 235, "header": "tr|Q9LV46-1|Q9LV46_ARATH Isoform 1 of Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV46-1" }, "isoforms": [ { "isoform_ac": "F4J7Q0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV46/entry#F4J7Q0-1", "sequence": { "sequence": "MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKWKQDAEFKVNWKRVAITSMYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV", "length": 222, "header": "tr|F4J7Q0-1|F4J7Q0_ARATH Computationally mapped isoform of Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV46-1" }, "locus": { "chromosome": "3", "start_pos": 8966642, "end_pos": 8968640, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G24570.2", "url": "https://www.ensemblgenomes.org/id/AT3G24570.2" }, { "database": "Ensembl Peptide", "id": "AT3G24570.2", "url": "https://www.ensemblgenomes.org/id/AT3G24570.2" } ] } }, { "isoform_ac": "Q9LV46-1", "url": "https://www.uniprot.org/uniprotkb/Q9LV46/entry#Q9LV46-1", "sequence": { "sequence": "MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV", "length": 235, "header": "tr|Q9LV46-1|Q9LV46_ARATH Isoform 1 of Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LV46-1" }, "locus": { "chromosome": "3", "start_pos": 8966521, "end_pos": 8968676, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G24570.1", "url": "https://www.ensemblgenomes.org/id/AT3G24570.1" }, { "database": "Ensembl Peptide", "id": "AT3G24570.1", "url": "https://www.ensemblgenomes.org/id/AT3G24570.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LV46", "url": "https://www.uniprot.org/uniprotkb/Q9LV46" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV46", "url": "https://www.uniprot.org/uniprotkb/Q9LV46" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G24570", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G24570", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287AZQ7-1", "protein_name": "Mitochondrial inner membrane protein Mpv17", 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], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LV70", "url": "https://www.uniprot.org/uniprotkb/Q9LV70" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G48430", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G48430", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { 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"header": "tr|Q9LVC4-1|Q9LVC4_ARATH Isoform 1 of Ras guanine nucleotide exchange factor Q-like protein OS=Arabidopsis thaliana OX=3702 GN=MJB24.15 PE=1 SV=1 CANONICAL=Q9LVC4-1" }, "locus": { "chromosome": "5", "start_pos": 23225951, "end_pos": 23229298, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G57340.2", "url": "https://www.ensemblgenomes.org/id/AT5G57340.2" }, { "database": "Ensembl Peptide", "id": "AT5G57340.2", "url": "https://www.ensemblgenomes.org/id/AT5G57340.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVC4", "url": "https://www.uniprot.org/uniprotkb/Q9LVC4" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVC4", "url": "https://www.uniprot.org/uniprotkb/Q9LVC4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LVC4", "url": "https://www.uniprot.org/uniprotkb/Q9LVC4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 212, "end_pos": 214, "annotation": "n_glycosylation_sequon" }, { "start_pos": 252, "end_pos": 254, "annotation": "n_glycosylation_sequon" }, { "start_pos": 30, "end_pos": 32, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVE6-1", "uniprot_ac": "Q9LVE6", "uniprot_id": "Q9LVE6_ARATH", "mass": { "chemical_mass": 40455.0, "monoisotopic_mass": 40455.0 }, "refseq": { "ac": "NP_188797", "name": "Senescence/dehydration-associated protein-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188797" }, "gene_names": [], "protein_names": [ { "name": "Senescence/dehydration-associated protein-like protein", "type": "synonym", "evidence": [ { "id": "NP_188797", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188797" }, { "id": "Q9LVE6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVE6", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6", "locus": {} } ], "crossref": [ { "id": "AT3G21600", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G21600", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821714", "url": "https://www.ncbi.nlm.nih.gov/gene/821714", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009686", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009686", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045036", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045036", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G21600", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G21600", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NPEAYWT", "url": "https://omabrowser.org/oma/group/NPEAYWT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LSF2", "url": "https://www.orthodb.org/?gene=A0A1I9LSF2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4IXM9", "url": "https://www.orthodb.org/?gene=F4IXM9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LVE6", "url": "https://www.orthodb.org/?gene=Q9LVE6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21068", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21068", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21068:SF36", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21068:SF36", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06911", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06911", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188797", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G21600", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G21600", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LSF2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSF2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IXM9", "url": "https://www.uniprot.org/uniprotkb/F4IXM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IXM9-1", "url": "https://www.uniprot.org/uniprotkb/F4IXM9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVE6", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVE6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCFGPSKASRTRNNEHDKITRQNPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWPVIRDEPVVKLDARDYLFTLPVKDGDPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSCFSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMVSERFGDNAGEATGDVLATAGHAAGTAWNVLKIRKTFYPSSSLTSGIVKNAPRK", "length": 374, "header": "tr|Q9LVE6-1|Q9LVE6_ARATH Isoform 1 of Senescence/dehydration-associated protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVE6-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSF2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6/entry#A0A1I9LSF2-1", "sequence": { "sequence": "MGCFGPSKASRTRNNEHDKITRQNPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWPVIRDEPVVKLDARDYLFTLPVKDGDPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSCFSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQRYSLNSFITLYIFCYVRNFHNGSIYTQM", "length": 267, "header": "tr|A0A1I9LSF2-1|A0A1I9LSF2_ARATH Computationally mapped isoform of Senescence/dehydration-associated protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVE6-1" }, "locus": { "chromosome": "3", "start_pos": 7606487, "end_pos": 7608444, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21600.3", "url": "https://www.ensemblgenomes.org/id/AT3G21600.3" }, { "database": "Ensembl Peptide", "id": "AT3G21600.3", "url": "https://www.ensemblgenomes.org/id/AT3G21600.3" } ] } }, { "isoform_ac": "F4IXM9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6/entry#F4IXM9-1", "sequence": { "sequence": "MGCFGPSKASRTRNNEHDKITRQNPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWPVIRDEPVVKLDARDYLFTLPVKDGDPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSCFSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMVSERFGDNAGEATGDVLATAGHAAGTAWNVLKILSVTFINV", "length": 361, "header": "tr|F4IXM9-1|F4IXM9_ARATH Computationally mapped isoform of Senescence/dehydration-associated protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9LVE6-1" }, "locus": { "chromosome": "3", "start_pos": 7606508, "end_pos": 7608444, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21600.2", "url": "https://www.ensemblgenomes.org/id/AT3G21600.2" }, { "database": "Ensembl Peptide", "id": "AT3G21600.2", "url": "https://www.ensemblgenomes.org/id/AT3G21600.2" } ] } }, { "isoform_ac": "Q9LVE6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6/entry#Q9LVE6-1", "sequence": { "sequence": "MGCFGPSKASRTRNNEHDKITRQNPSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDLQWPVIRDEPVVKLDARDYLFTLPVKDGDPLSYGVTFSGDDRDVALVNSLKLLDQFLSENSCFSSTASSKVNNGIDWQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMVSERFGDNAGEATGDVLATAGHAAGTAWNVLKIRKTFYPSSSLTSGIVKNAPRK", "length": 374, "header": "tr|Q9LVE6-1|Q9LVE6_ARATH Isoform 1 of Senescence/dehydration-associated protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVE6-1" }, "locus": { "chromosome": "3", "start_pos": 7606460, "end_pos": 7608477, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21600.1", "url": "https://www.ensemblgenomes.org/id/AT3G21600.1" }, { "database": "Ensembl Peptide", "id": "AT3G21600.1", "url": "https://www.ensemblgenomes.org/id/AT3G21600.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 226, "end_pos": 226, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser226" }, { "start_pos": 254, "end_pos": 254, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVE6" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr254" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis 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M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVE6", "url": "https://www.uniprot.org/uniprotkb/Q9LVE6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied 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"id": "IPR005135", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005135", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036691", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036691", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G21530", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G21530", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FDEWVVS", "url": "https://omabrowser.org/oma/group/FDEWVVS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14859:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14859:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03372", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03372", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001326570", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326570", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G21530", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G21530", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LPP5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPP5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVF3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLCVFRRKLGCLFSRLRWVIKKRVRARVIVRRFRKARWRARRKESPESEVSSIHLSSNSGRHIRVATFNVAMFSLAPVVQTMEETAFLGHLDSSNITCPSPKGILKQSPLHSSAVRKPKVCINLPDNEISLAQSYSFLSMVENDNDGKENRGSLSMRSPVCLPSCWWDQESFNGYSSRRSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYGNAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDAITRGDESPHILLGGLNSLDGSDYSIARWNHIVKYYEDSGKPTPRVEVMRFLKGKGYLDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPESPYEFVPGSYSVVSSKGTSDHHIVKVDLVITKERSRGNFKHSRKKAKQKIFQIKANLMSKDTWKLGNLMSS", "length": 458, "header": "tr|Q9LVF3-1|Q9LVF3_ARATH Isoform 1 of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVF3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3/entry#A0A1I9LPP5-1", "sequence": { "sequence": "MLCVFRRKLGCLFSRLRWVIKKRVRARVIVRRFRKARWRARRKESPESEVSSIHLSSNSGRHIRVATFNVAMFSLAPVVQTMEETAFLGHLDSSNITCPSPKGILKQSPLHSSAVRKPKVCINLPDNEISLAQSYSFLSMVENDNDGKENRGSLSMRSPVCLPSCWWDQESFNGYSSRRSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYGNAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDAITRGDESPHILLGGLNSLDGSDYSIARWNHIVKVQFR", "length": 328, "header": "tr|A0A1I9LPP5-1|A0A1I9LPP5_ARATH Computationally mapped isoform of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVF3-1" }, "locus": { "chromosome": "3", "start_pos": 7583372, "end_pos": 7584741, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21530.4", "url": "https://www.ensemblgenomes.org/id/AT3G21530.4" }, { "database": "Ensembl Peptide", "id": "AT3G21530.4", "url": "https://www.ensemblgenomes.org/id/AT3G21530.4" } ] } }, { "isoform_ac": "Q9LVF3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3/entry#Q9LVF3-1", "sequence": { "sequence": "MLCVFRRKLGCLFSRLRWVIKKRVRARVIVRRFRKARWRARRKESPESEVSSIHLSSNSGRHIRVATFNVAMFSLAPVVQTMEETAFLGHLDSSNITCPSPKGILKQSPLHSSAVRKPKVCINLPDNEISLAQSYSFLSMVENDNDGKENRGSLSMRSPVCLPSCWWDQESFNGYSSRRSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYGNAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDAITRGDESPHILLGGLNSLDGSDYSIARWNHIVKYYEDSGKPTPRVEVMRFLKGKGYLDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPESPYEFVPGSYSVVSSKGTSDHHIVKVDLVITKERSRGNFKHSRKKAKQKIFQIKANLMSKDTWKLGNLMSS", "length": 458, "header": "tr|Q9LVF3-1|Q9LVF3_ARATH Isoform 1 of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVF3-1" }, "locus": { "chromosome": "3", "start_pos": 7582740, "end_pos": 7584751, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21530.1", "url": "https://www.ensemblgenomes.org/id/AT3G21530.1" }, { "database": "Ensembl Peptide", "id": "AT3G21530.1", "url": "https://www.ensemblgenomes.org/id/AT3G21530.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G21530", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G21530", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "catalytic activity", "id": "GO:0003824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003824", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "GPI anchor biosynthetic process", "id": "GO:0006506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006506", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF3", "url": "https://www.uniprot.org/uniprotkb/Q9LVF3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVF7-1", "uniprot_ac": "Q9LVF7", "uniprot_id": "Q9LVF7_ARATH", "mass": { "chemical_mass": 115950.0, "monoisotopic_mass": 115950.0 }, "refseq": { "ac": "NP_188785", "name": "BRCT domain-containing DNA repair protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188785" }, "gene_names": [], "protein_names": [ { "name": "BRCT domain-containing DNA repair protein", "type": "synonym", "evidence": [ { "id": "NP_188785", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188785" }, { "id": "Q9LVF7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVF7", "url": 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16589", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16770", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16770", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188785", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188785", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G21480", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G21480", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LVF7", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVF7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKSNQNFSPYEETQPIDSNPPSSSDSGEDKDSLLGDCDTQPVDDNALINDQYMETQVMDTECDNEEFLLCNETQAVDLGFETGEEVLVEGKQLLEASDGLATQVLDLCDDEVVVDSDDDVTDVLEGNSDLSDSDDSGSKAETVLSSEENRQDANEKVKSAVVFDAWSNEHGVSGKKVARFASVRSAAFRASAVAARVANQKSANTDCSTLINCHSSGKGTTHNSGLENSVGEVGNQQSLTSLFVEEKKDLRTGKKTARKLFVEDFPEEKFHSTDCNVDLGNLSYIGSQEPGEESQASALNLVDKLISECRLEFDFEVQADYGRKTEDKSKFVQIFKGPQELAKKVSYKSGAVGNNIFDWDDNREDEGGGDIYRRRKDEFFGVASKRREFSSLPREQKRELIPVAVDKRWARSDSKLLKHSVTRSRKNIQGAKKNLGKELDEVREAAVLGNDTQVAAEAIDDLCSGDRGKFDGEASCLTGKKLSPEEERGFSPGGVVTRQSKGTKRIQAMSKDELLKKRMKKASPSPAKACRTNIEGSSNGDQLNKEGPCCWKSRKVQTASRETKKNLVDEFDEVSQESNTEMFDRHEEAEAGPDTQMAAEVMNALHSGDGREIDPEPNNLIGKKLLLEGGISRCGVVTRKSKRIKGIQAVDNDVESLKPKNKKARSILAKSFEKNMDRYSKNDKVDTPDEAVASTTEKRQGELSNKHCMSKLLKQSHRGEAEVLNYPKRRRSARISQDQVNEAGRSSDPAFDTPAKSKTPSTNVSPICMGDEYHRLSCKDSFTSHTTREFRSLTVPVAEPISETKSTRKRRDLGSICVLFSQHLDEDVTKHQKKILARFDISEASSMKEATHFIADNFTRTRNMLEAIASGKPVVTTQWLESIDQVNIYVDEDMYILRDSKKEKEFCFNMGVSLARARQFPLLQGRRVFITPNTKPALNTITTLVKAVHGLPVERLGRSSLSEDKVPENLLVLSCEEDRAICIPFLERGAEVYSSELLLNGIVTQRLEYERYRLFTDHVRRTRSTIWIKDGKGKFQRRSG", "length": 1041, "header": "tr|Q9LVF7-1|Q9LVF7_ARATH Isoform 1 of BRCT domain-containing DNA repair protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVF7-1" }, "isoforms": [ { "isoform_ac": "Q9LVF7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7/entry#Q9LVF7-1", "sequence": { "sequence": "MAKSNQNFSPYEETQPIDSNPPSSSDSGEDKDSLLGDCDTQPVDDNALINDQYMETQVMDTECDNEEFLLCNETQAVDLGFETGEEVLVEGKQLLEASDGLATQVLDLCDDEVVVDSDDDVTDVLEGNSDLSDSDDSGSKAETVLSSEENRQDANEKVKSAVVFDAWSNEHGVSGKKVARFASVRSAAFRASAVAARVANQKSANTDCSTLINCHSSGKGTTHNSGLENSVGEVGNQQSLTSLFVEEKKDLRTGKKTARKLFVEDFPEEKFHSTDCNVDLGNLSYIGSQEPGEESQASALNLVDKLISECRLEFDFEVQADYGRKTEDKSKFVQIFKGPQELAKKVSYKSGAVGNNIFDWDDNREDEGGGDIYRRRKDEFFGVASKRREFSSLPREQKRELIPVAVDKRWARSDSKLLKHSVTRSRKNIQGAKKNLGKELDEVREAAVLGNDTQVAAEAIDDLCSGDRGKFDGEASCLTGKKLSPEEERGFSPGGVVTRQSKGTKRIQAMSKDELLKKRMKKASPSPAKACRTNIEGSSNGDQLNKEGPCCWKSRKVQTASRETKKNLVDEFDEVSQESNTEMFDRHEEAEAGPDTQMAAEVMNALHSGDGREIDPEPNNLIGKKLLLEGGISRCGVVTRKSKRIKGIQAVDNDVESLKPKNKKARSILAKSFEKNMDRYSKNDKVDTPDEAVASTTEKRQGELSNKHCMSKLLKQSHRGEAEVLNYPKRRRSARISQDQVNEAGRSSDPAFDTPAKSKTPSTNVSPICMGDEYHRLSCKDSFTSHTTREFRSLTVPVAEPISETKSTRKRRDLGSICVLFSQHLDEDVTKHQKKILARFDISEASSMKEATHFIADNFTRTRNMLEAIASGKPVVTTQWLESIDQVNIYVDEDMYILRDSKKEKEFCFNMGVSLARARQFPLLQGRRVFITPNTKPALNTITTLVKAVHGLPVERLGRSSLSEDKVPENLLVLSCEEDRAICIPFLERGAEVYSSELLLNGIVTQRLEYERYRLFTDHVRRTRSTIWIKDGKGKFQRRSG", "length": 1041, "header": "tr|Q9LVF7-1|Q9LVF7_ARATH Isoform 1 of BRCT domain-containing DNA repair protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVF7-1" }, "locus": { "chromosome": "3", "start_pos": 7567565, "end_pos": 7572202, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G21480.1", "url": "https://www.ensemblgenomes.org/id/AT3G21480.1" }, { "database": "Ensembl Peptide", "id": "AT3G21480.1", "url": "https://www.ensemblgenomes.org/id/AT3G21480.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF7", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF7", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G21480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G21480", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF7", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "Q9LVF7", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 282, "end_pos": 284, "annotation": "n_glycosylation_sequon" }, { "start_pos": 451, "end_pos": 453, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" }, { "start_pos": 764, "end_pos": 766, "annotation": "n_glycosylation_sequon" }, { "start_pos": 7, "end_pos": 9, "annotation": "n_glycosylation_sequon" }, { "start_pos": 858, "end_pos": 860, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LVF7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVF7" }, { "id": "PS50172", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50172" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BRCT", "eco_id": "ECO_0000259", "start_pos": 786, "end_pos": 898, "start_aa": "His", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], 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"https://www.uniprot.org/uniprotkb/Q9LVG5" } ] }, { "name": "MGO3.7", "type": "synonym", "evidence": [ { "id": "NP_200817", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200817" } ] }, { "name": "MGO3_7", "type": "synonym", "evidence": [ { "id": "NP_200817", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200817" }, { "id": "Q9LVG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5" } ] } ], "protein_names": [ { "name": "Protein kinase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_200817", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200817" }, { "id": "Q9LVG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVG5", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MGO3.7", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5", "locus": {} } ], "crossref": [ { "id": "cd14066", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14066", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "836131", "url": "https://www.ncbi.nlm.nih.gov/gene/836131", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G60090", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G60090", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CVIVHEF", "url": "https://omabrowser.org/oma/group/CVIVHEF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47985", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47985", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47985:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47985:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_200817", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200817", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G60090", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G60090", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LVG5", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVG5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKRFLCCLKGGSSSNAAQGNDENDEVDVERLFGNNERLNHLWRNHLRLPDDREVADPTAALLPVSPPLPDNCGESFLWRELVNGTINFRDEFYLGKGNFGEVHRCYFSRLNVDGAVKVQNPQNPTGHVEFLAEVTTLRATNHPNVIRLLGNCYGQRNRAIIYEFMANGDLERHIFAHKTMVEGPRPKGLTLPIRVLDWYTRMKIAVGVAKGLVYLHEELKVINRDVKAGNILLDADFVPKLTDFGLATKIVEDENGVEQQQRIIPMKASMGYIAPEGEISWLVSTKTDVYSYGAFLLVLFTGRKPFYSDNPAGKKNLTDWFLRVWDRIEDAPVKADVALGNRYSVEGLKKIFDTARMCIKAERLERPTMSEVEAMVLEAAAFPVQVPRQVTRRRSAST", "length": 398, "header": "tr|Q9LVG5-1|Q9LVG5_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MGO3.7 PE=1 SV=1 CANONICAL=Q9LVG5-1" }, "isoforms": [ { "isoform_ac": "Q9LVG5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVG5/entry#Q9LVG5-1", "sequence": { "sequence": "MKRFLCCLKGGSSSNAAQGNDENDEVDVERLFGNNERLNHLWRNHLRLPDDREVADPTAALLPVSPPLPDNCGESFLWRELVNGTINFRDEFYLGKGNFGEVHRCYFSRLNVDGAVKVQNPQNPTGHVEFLAEVTTLRATNHPNVIRLLGNCYGQRNRAIIYEFMANGDLERHIFAHKTMVEGPRPKGLTLPIRVLDWYTRMKIAVGVAKGLVYLHEELKVINRDVKAGNILLDADFVPKLTDFGLATKIVEDENGVEQQQRIIPMKASMGYIAPEGEISWLVSTKTDVYSYGAFLLVLFTGRKPFYSDNPAGKKNLTDWFLRVWDRIEDAPVKADVALGNRYSVEGLKKIFDTARMCIKAERLERPTMSEVEAMVLEAAAFPVQVPRQVTRRRSAST", "length": 398, "header": "tr|Q9LVG5-1|Q9LVG5_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MGO3.7 PE=1 SV=1 CANONICAL=Q9LVG5-1" }, "locus": { "chromosome": "5", "start_pos": 24195939, "end_pos": 24197865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G60090.1", "url": "https://www.ensemblgenomes.org/id/AT5G60090.1" }, { "database": "Ensembl Peptide", "id": "AT5G60090.1", "url": "https://www.ensemblgenomes.org/id/AT5G60090.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam 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"database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WVIVHRI", "url": "https://omabrowser.org/oma/group/WVIVHRI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LVG7", "url": "https://www.orthodb.org/?gene=Q9LVG7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24186", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24186", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24186:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24186:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": 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"MEEASTSTPAPMAAKPTVVKKTMAKQFTGKREDSQLLSAVRRGDFSAVKEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIKYYDLEDAETKARNGFDPFHIAAKQGELDVLRVLMEEHPELSMTVDLSNTTALHTAAAQGHVEVVEYLLEAAGSSLAAIAKSNGKTALHSAARNGHAEVVKAIVAVEPDTATRTDKKGQTPLHMAVKGQSIDVVVELMKGHRSSLNMADSKGNTALHVATRKGRIKIVELLLDNNETSPSTKAINRAGETPLDTAEKTGHPQIAAVLKTRGVPSAKAINNTTRPNAARELKQTVSDIKHEVHHQLEHARETRKRVQGIAKRINKMHVEGLDNAINSTTVVAVLIATVAFAAIFTVPGQYADELSSLLPGQSLGEANIADRPAFAIFFIFDSIALFISLAVVVVQTSVVAIEHKAKKNMMAVINKLMWLACVLISVAFLALAFVVVGEEERWLAVGVTVFGATIMLTTLGTMCYWVIMHRIEASNVRKSRKESMARSRQSGLLEFSGILTKRMYAI", "length": 548, "header": "tr|Q9LVG7-1|Q9LVG7_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN=MGO3.5 PE=1 SV=1 CANONICAL=Q9LVG7-1" }, "isoforms": [ { "isoform_ac": "Q9LVG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVG7/entry#Q9LVG7-1", "sequence": { "sequence": 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"https://www.ensemblgenomes.org/id/AT5G60070.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 8, "start_aa": "Thr", "end_pos": 8, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr8", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, 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"id": "ath:AT3G14040", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G14040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AWKENNC", "url": "https://omabrowser.org/oma/group/AWKENNC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31375", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31375", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00295", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00295", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188020", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G14040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G14040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVJ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVGSHKASGVLLVLLVVMATTIANGTPVVDTAKNAATAVEDTAKNAATAVGGAAASVGAKVTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVAKPGP", "length": 445, "header": "tr|Q9LVJ4-1|Q9LVJ4_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVJ4-1" }, "isoforms": [ { "isoform_ac": "Q9LVJ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4/entry#Q9LVJ4-1", "sequence": { "sequence": "MVGSHKASGVLLVLLVVMATTIANGTPVVDTAKNAATAVEDTAKNAATAVGGAAASVGAKVTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVAKPGP", "length": 445, "header": "tr|Q9LVJ4-1|Q9LVJ4_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVJ4-1" }, "locus": { "chromosome": "3", "start_pos": 4648236, "end_pos": 4650319, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G14040.1", "url": "https://www.ensemblgenomes.org/id/AT3G14040.1" }, { "database": "Ensembl Peptide", "id": "AT3G14040.1", "url": "https://www.ensemblgenomes.org/id/AT3G14040.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 70, "end_pos": 70, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVJ4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser70" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LVJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVJ4" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G14040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G14040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "pmid": "" }, { "name": "cell wall organization", "id": "GO:0071555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071555", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "lyase activity", "id": "GO:0016829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016829", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "pmid": "" }, { "name": "polygalacturonase activity", "id": "GO:0004650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004650", "evidence": [ { "database": "UniProtKB", "id": "Q9LVJ4", "url": "https://www.uniprot.org/uniprotkb/Q9LVJ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 343, "end_pos": 345, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 70 ], "sequon_annotation_sites": [ { "start_pos": 223, "end_pos": 225 }, { "start_pos": 24, "end_pos": 26 }, { "start_pos": 343, "end_pos": 345 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVK6-1", "uniprot_ac": "Q9LVK6", "uniprot_id": "Q9LVK6_ARATH", "mass": { "chemical_mass": 50625.0, "monoisotopic_mass": 50625.0 }, "refseq": { "ac": "NP_188010", "name": "DNA binding / DNA-directed RNA polymerase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188010" }, "gene_names": [], "protein_names": [ { "name": "DNA binding / DNA-directed RNA polymerase", "type": "synonym", "evidence": [ { "id": "NP_188010", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188010" }, { "id": "Q9LVK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6", "locus": {} } ], "crossref": [ { "id": "820607", "url": "https://www.ncbi.nlm.nih.gov/gene/820607", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LVK6", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LVK6*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR009668", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009668", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G13940", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13940", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DVYPFDE", "url": "https://omabrowser.org/oma/group/DVYPFDE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14440", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14440", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06870", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06870", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188010", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188010", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G13940", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G13940", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVK6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGEEKNDYRNEEEDFNTPQQLQKKQRKGKKIATETEDENEEDKRVTLKVTQVAERPDRISPIVAYFSTGYDPCKVDPKTGKRVHETPKVTVYKHKDDSKKRIQVVVSPPGARVEFVGTNYTGEQAAMQTNTYRVGVFNREAKTLRILPVAHNKIIRLEPRVKAQETNEEEASGSAVVKELEELKTGERDRYNTKKAVTRDKKKRALYMGDDAATQKVLDGKLSELGVNTAALEGTSSTVARNIPPYNTAATTANEAYPLEKIIEKGDWSFLEDIYWLLQQETEAATEAYPVFVRNRLYRLRDIKDDMKKQTVCGAATLLTHLVKFKDRNSMNGYDSAKDHKMPDIFRQKFNSMFKDSESDRIPVDKINLLISYVLVLSLHVDNFMTDPEDIAKDLRISTVELRKHFLQLGCKFLKQNSTTVATLPTPLNFPEVNRRRRARK", "length": 442, "header": "tr|Q9LVK6-1|Q9LVK6_ARATH Isoform 1 of DNA binding / DNA-directed RNA polymerase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVK6-1" }, "isoforms": [ { "isoform_ac": "Q9LVK6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6/entry#Q9LVK6-1", "sequence": { "sequence": "MEGEEKNDYRNEEEDFNTPQQLQKKQRKGKKIATETEDENEEDKRVTLKVTQVAERPDRISPIVAYFSTGYDPCKVDPKTGKRVHETPKVTVYKHKDDSKKRIQVVVSPPGARVEFVGTNYTGEQAAMQTNTYRVGVFNREAKTLRILPVAHNKIIRLEPRVKAQETNEEEASGSAVVKELEELKTGERDRYNTKKAVTRDKKKRALYMGDDAATQKVLDGKLSELGVNTAALEGTSSTVARNIPPYNTAATTANEAYPLEKIIEKGDWSFLEDIYWLLQQETEAATEAYPVFVRNRLYRLRDIKDDMKKQTVCGAATLLTHLVKFKDRNSMNGYDSAKDHKMPDIFRQKFNSMFKDSESDRIPVDKINLLISYVLVLSLHVDNFMTDPEDIAKDLRISTVELRKHFLQLGCKFLKQNSTTVATLPTPLNFPEVNRRRRARK", "length": 442, "header": "tr|Q9LVK6-1|Q9LVK6_ARATH Isoform 1 of DNA binding / DNA-directed RNA polymerase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVK6-1" }, "locus": { "chromosome": "3", "start_pos": 4600422, "end_pos": 4602582, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G13940.1", "url": "https://www.ensemblgenomes.org/id/AT3G13940.1" }, { "database": "Ensembl Peptide", "id": "AT3G13940.1", "url": "https://www.ensemblgenomes.org/id/AT3G13940.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 230, "end_pos": 230, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVK6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVK6" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Thr230" }, { "start_pos": 36, "end_pos": 36, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVK6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVK6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr36" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LVK6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVK6" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LVK6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVK6" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LVK6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVK6" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G13940", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G13940", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0X9P2-1", "protein_name": "RNA polymerase I subunit E", "gene_name": "POLR1E", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MATATWCYRGDPEEEQPALLVTFSNGQLQRPDAVRFSLYRSSEVANPRKRRRRILVSETERLSYVGNNFGSGAMKCNSLCRYFLGVLNKDTGQMEVYNAEIFNMQPLLSDNVIPDDTRDYQNKSYREKVDLCIEAFGTSKQKRALNSRRMNAVGNDIVSTAVTKAAADVIDAKGVTALIQDVAQDDEQNMSIFLPPCHEDADKPENVYKFEDILSPAEYEALQGPAAAFMNITPEEITKKTEEKSHCSFVLEELKFLPADEKSRDRKARCLWFLDLLIKFSFLKIIKKKHPMGPECPHIISRKLMKNFTSLTYNNGSVQNLISASLKTKIAAYVIALALHIKNFQTDLTVLQNDLKLHESRMMDIARAMRLKVSKAKGMPGLENDQNHKLGTLSLPLPVQKASGSQRKRKKMN", "length": 413 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1ST74-1", "protein_name": "RNA polymerase I subunit E", "gene_name": "POLR1E", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAAEVLPSARWLYCGDPEESQRALLVQFSNGKLQNPGNMRFTLYKSNDSTNPRKRSQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAEMFNMQPLFTDESVESESTLESQAKSFREKMDSCIEAFGTTKQKRALNSRRMNKVGSESLNRAVAKAAEDIIDSKGVTALVSDAIHSDLQDDSLYLPPCHADAAKPEDVYKFEDLLSPAEYDALQSPSEAFRNVTSEQILKMIEENSHCSFVIEALKSLPSNQESRDRQARCIWFLDTLIKFRAQKVIKRKSALGPGIPHVISTKLLKHFTCLTYNNGSLRNVISDSMKAKITAYVIILALHINDFQIDLTMLQRDLKLSEKRMMEIAKAMRLKISKRKVSLAAGREEDHKLGTLSIPLPPAQTSDRQSKRKRIS", "length": 419 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F7ESP7-1", "protein_name": "RNA polymerase I subunit E", "gene_name": "Polr1e", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATPDSPGMDGQTGDTETEVLQSARWQYCGEPDDRQKAVLVQFSNGKLQNPGNMRFTLYNSTDLVNPRQKCHRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAEVFNMQPLFAEDSIEHGPPLENQNKTFRDKLDSCIEAFGSTKQKRSLNSRRMNKVGSESLNFTVAKAAESIIDTKGVSALVSDAMQDDLQNDSLYLPPCHADATKPEDVYRFEDILSPAEYDALESPSEAFRKVMSEDILKMVEENRSVVTGCWEWPRGVVENKLEFSARAAILYHCSFIIEMLKSLPADEVQRNRQARSIWFLDALLRFRAQKVIKGKSALGPGIPHIINTKLLKQFTCLTYNNGSLRNLISSSMKAKITAYAIILALHINNFQIDLTVLQRDLKLSEKRMIEIARAMRLKISKRKVSLADGREEDHRLGTLSVPLPPAQTSDRQSKRKKMS", "length": 462 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01080-1", "protein_name": "DNA-directed RNA polymerase I subunit RPA49", "gene_name": "RPA49", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTRPSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNSKYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR", "length": 415 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8K202-1", "protein_name": "DNA-directed RNA polymerase I subunit RPA49", "gene_name": "Polr1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATLESPGMDDQAGDTETEALQSARWLYCGEPDDRQKAVLVQFSNGKLQNPGDMRFTLYNSTDLVNPRQRSHRIVAAETDRLSYVGNNFGTGALKCNALCRHFVGILNKTSGQMEVYDAELFNMQPLFAGMGTEVIKLGGQHLYLLAFCQPSKNLAEAGDLLLSRHRQGHCIAVLLDDDAIEREPPLENQNKTFRDKLDSCIEAFGSTKQKRSLNSRRMNKVGSESLNLSVAKAAESIIDTKGVNALVSDAMQDDLQDGVLYLPPCYADAAKPEDVYRFEDILSPAEYDALESPSEAFRKVTSEDILKMIEENSHCSYVIEMLKSLPIDEVHRNRQARSIWFLDALIRFRAQKVIKGKRALGPGIPHIINTKLLKQFTCLTYNNGRLQNLISSSMRAKITSYAIILALHINNFQVDLTALQKDLKLSEKRMIEIAKAMRLKISKQKVSLADGREESHRLGTLSVPLPPAQNSDRQSKRRKMN", "length": 482 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GZS1-2", "protein_name": "DNA-directed RNA polymerase I subunit RPA49", "gene_name": "POLR1E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAEVLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLYENKDSTNPRKRNQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQPLFSDVSVESELALESQTKTYREKMDSCIEAFGTTKQKRALNTRRMNRVGNESLNRAVAKAAETIIDTKGVTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVYKFEDLLSPAEYEALQSPSEAFRNVTSEEILKMIEENSHCTFVIEALKSLPSDVESRDRQARCIWFLDTLIKFRAHRVVKRKSALGPGVPHIINTKLLKHFTCLTYNNGRLRNLISDSMKAKITAYVIILALHIHDFQIDLTVLQRDLKLSEKRMMEIAKAMRLKISKRRVSVAAGSEEDHKLGTLSLPLPPAQTSDRLAKRRKIT", "length": 419 }, "evidence": [ { "id": "Q9LVK6", "url": "https://omabrowser.org/oma/group/Q9LVK6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "pmid": "" }, { "name": "RNA polymerase I complex", "id": "GO:0005736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005736", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "transcription elongation by RNA polymerase I", "id": "GO:0006362", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006362", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "pmid": "" }, { "name": "RNA polymerase I preinitiation complex assembly", "id": "GO:0001188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001188", "evidence": [ { "database": "UniProtKB", "id": "Q9LVK6", "url": "https://www.uniprot.org/uniprotkb/Q9LVK6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 120, "end_pos": 122, "annotation": "n_glycosylation_sequon" }, { "start_pos": 418, "end_pos": 420, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 36, 230 ], "sequon_annotation_sites": [ { "start_pos": 120, "end_pos": 122 }, { "start_pos": 418, "end_pos": 420 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVN9-1", "uniprot_ac": "Q9LVN9", "uniprot_id": "Q9LVN9_ARATH", "mass": { "chemical_mass": 77356.0, "monoisotopic_mass": 77356.0 }, "refseq": { "ac": "NP_201199", "name": "kinase with adenine nucleotide alpha hydrolases-like domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201199" }, "gene_names": [ { "name": "MBM17.4", "type": "recommended", "evidence": [ { "id": "Q9LVN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ] }, { "name": "MBM17.4", "type": "synonym", "evidence": [ { "id": "NP_201199", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201199" } ] }, { "name": "MBM17_4", "type": "synonym", "evidence": [ { "id": "NP_201199", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201199" }, { "id": "Q9LVN9", "database": "UniProtKB", "url": 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alpha hydrolases-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MBM17.4 PE=1 SV=1 CANONICAL=Q9LVN9-1" }, "locus": { "chromosome": "5", "start_pos": 25587998, "end_pos": 25591482, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G63940.1", "url": "https://www.ensemblgenomes.org/id/AT5G63940.1" }, { "database": "Ensembl Peptide", "id": "AT5G63940.1", "url": "https://www.ensemblgenomes.org/id/AT5G63940.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 196, "end_pos": 196, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVN9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser196" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the 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D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVN9", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVN9" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVN9", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G63940", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G63940", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9LVN9", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9LVN9", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9LVN9", "url": "https://www.uniprot.org/uniprotkb/Q9LVN9" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR13511", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13511", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13511:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13511:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10241", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001326298", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326298", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G29130", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G29130", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNV2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNV2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J1T2", "url": "https://www.uniprot.org/uniprotkb/F4J1T2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J1T2-1", "url": "https://www.uniprot.org/uniprotkb/F4J1T2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEETIRAASQEVSNEFKTLVKVEDLNSLRHLQHLILGRLQDSNAVLSHYNEFAENCFSDVSLEFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ", "length": 119, "header": "tr|Q9LVP5-1|Q9LVP5_ARATH Isoform 1 of KxDL motif protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVP5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNV2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5/entry#A0A1I9LNV2-1", "sequence": { "sequence": "MLRLCLRLGRLQDSNAVLSHYNEFAENCFSDVSLEFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ", "length": 91, "header": "tr|A0A1I9LNV2-1|A0A1I9LNV2_ARATH Computationally mapped isoform of KxDL motif protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVP5-1" }, "locus": { "chromosome": "3", "start_pos": 11099603, "end_pos": 11104073, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29130.3", "url": "https://www.ensemblgenomes.org/id/AT3G29130.3" }, { "database": "Ensembl Peptide", "id": "AT3G29130.3", "url": "https://www.ensemblgenomes.org/id/AT3G29130.3" } ] } }, { "isoform_ac": "F4J1T2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5/entry#F4J1T2-1", "sequence": { "sequence": "MSKSDITESSLIHKVDMYEKVRVFEYEVDMYEKVRVFETPLEQVHKKCQMEETIRAASQEVSNEFKTLVKVEDLNSLRHLQHLILGRLQDSNAVLSHYNEFAENCFSDVSLEFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ", "length": 168, "header": "tr|F4J1T2-1|F4J1T2_ARATH Computationally mapped isoform of KxDL motif protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVP5-1" }, "locus": { "chromosome": "3", "start_pos": 11102272, "end_pos": 11103906, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29130.2", "url": "https://www.ensemblgenomes.org/id/AT3G29130.2" }, { "database": "Ensembl Peptide", "id": "AT3G29130.2", "url": "https://www.ensemblgenomes.org/id/AT3G29130.2" } ] } }, { "isoform_ac": "Q9LVP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5/entry#Q9LVP5-1", "sequence": { "sequence": "MEETIRAASQEVSNEFKTLVKVEDLNSLRHLQHLILGRLQDSNAVLSHYNEFAENCFSDVSLEFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ", "length": 119, "header": "tr|Q9LVP5-1|Q9LVP5_ARATH Isoform 1 of KxDL motif protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LVP5-1" }, "locus": { "chromosome": "3", "start_pos": 11099603, "end_pos": 11103509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29130.5", "url": "https://www.ensemblgenomes.org/id/AT3G29130.5" }, { "database": "Ensembl Peptide", "id": "AT3G29130.5", "url": "https://www.ensemblgenomes.org/id/AT3G29130.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G29130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G29130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" }, { "name": "BORC complex", "id": "GO:0099078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099078", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lysosome localization", "id": "GO:0032418", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032418", "evidence": [ { "database": "UniProtKB", "id": "Q9LVP5", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LVP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVP5" }, { "id": "PF10241", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10241" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KxDL", "eco_id": "ECO_0000259", "start_pos": 16, "end_pos": 100, "start_aa": "Phe", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LVQ3-1", "uniprot_ac": "Q9LVQ3", "uniprot_id": "Q9LVQ3_ARATH", "mass": { "chemical_mass": 25814.0, "monoisotopic_mass": 25814.0 }, "refseq": { "ac": "NP_200398", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200398" }, "gene_names": [ { "name": "ATDOB15", "type": "recommended", "evidence": [ { "id": "Q9LVQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3" } ] }, { "name": "MWJ3.5", "type": "synonym", "evidence": [ { "id": "NP_200398", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200398" }, { "id": "Q9LVQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3" } ] }, { "name": "MWJ3_5", "type": "synonym", "evidence": [ { "id": "NP_200398", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200398" }, { "id": "Q9LVQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LVQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_200398", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200398" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LVQ3", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATDOB15", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3", "locus": {} } ], "crossref": [ { "id": "835682", "url": "https://www.ncbi.nlm.nih.gov/gene/835682", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT5G55870", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G55870", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9LVQ3", "url": "https://www.orthodb.org/?gene=Q9LVQ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "NP_200398", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200398", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G55870", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G55870", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LVQ3", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LVQ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLLLNQPLKLLCFRRKPVLVRSSLMQTPPCSIVGVQPCGADHLGRLDVMMMSRRTCLEKKVPLELVNSDPMVTIGSSHGWVATLKEDGILRLQDDLNPVASDTNPKRIPLPPLVTLPHCQTQIVLLQIKSTHCVFWHLTYKQINTFLTNTNQHAQNHLFMDSKTLSNHIKIKIHQFQSKYGLSVIYIINSINLLNQKKKFHEIDFDMDFYILKNLFFCNLYFN", "length": 224, "header": "tr|Q9LVQ3-1|Q9LVQ3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=ATDOB15 PE=4 SV=1 CANONICAL=Q9LVQ3-1" }, "isoforms": [ { "isoform_ac": "Q9LVQ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVQ3/entry#Q9LVQ3-1", "sequence": { "sequence": "MSLLLNQPLKLLCFRRKPVLVRSSLMQTPPCSIVGVQPCGADHLGRLDVMMMSRRTCLEKKVPLELVNSDPMVTIGSSHGWVATLKEDGILRLQDDLNPVASDTNPKRIPLPPLVTLPHCQTQIVLLQIKSTHCVFWHLTYKQINTFLTNTNQHAQNHLFMDSKTLSNHIKIKIHQFQSKYGLSVIYIINSINLLNQKKKFHEIDFDMDFYILKNLFFCNLYFN", "length": 224, "header": "tr|Q9LVQ3-1|Q9LVQ3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=ATDOB15 PE=4 SV=1 CANONICAL=Q9LVQ3-1" }, "locus": { "chromosome": "5", "start_pos": 22612637, "end_pos": 22613311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G55870.1", "url": "https://www.ensemblgenomes.org/id/AT5G55870.1" }, { "database": "Ensembl Peptide", "id": "AT5G55870.1", "url": "https://www.ensemblgenomes.org/id/AT5G55870.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the 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"MGEKGLKRSGVAVVVALLAMVHVSVSVPFIMLHGISAQCSNARDANFTQLLTNLSGSPGFCLEIGNGVADSWLMPLTRQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSVPMCGSGLFCKLADELIKGDIYSDFIQDHLAPSGYLKIPTDMTKYLGSSKYLPKLNNEIPDQRNQTYKDRFTSLHNLVLIKFQGDKVIVPKDSSWFGFYPDGEFEPLLSAQQTKLYTEDWIGLKTLDDAGKVKFVSVAGEHIRMVDEDVVKHVVPYLQDQPSSVQSFNRKTKQPLHA", "length": 314, "header": "tr|Q9LVS6-1|Q9LVS6_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MQL5.19 PE=1 SV=1 CANONICAL=Q9LVS6-1" }, "isoforms": [ { "isoform_ac": "Q9LVS6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LVS6/entry#Q9LVS6-1", "sequence": { "sequence": "MGEKGLKRSGVAVVVALLAMVHVSVSVPFIMLHGISAQCSNARDANFTQLLTNLSGSPGFCLEIGNGVADSWLMPLTRQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSVPMCGSGLFCKLADELIKGDIYSDFIQDHLAPSGYLKIPTDMTKYLGSSKYLPKLNNEIPDQRNQTYKDRFTSLHNLVLIKFQGDKVIVPKDSSWFGFYPDGEFEPLLSAQQTKLYTEDWIGLKTLDDAGKVKFVSVAGEHIRMVDEDVVKHVVPYLQDQPSSVQSFNRKTKQPLHA", "length": 314, "header": 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Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVS6", "url": "https://www.uniprot.org/uniprotkb/Q9LVS6" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete 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] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVS8", "url": "https://www.uniprot.org/uniprotkb/Q9LVS8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G47310", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G47310", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LVS8", "url": "https://www.uniprot.org/uniprotkb/Q9LVS8" } ], "pmid": "" } ] }, { "name": 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M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV6", "url": 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Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV6", "url": "https://www.uniprot.org/uniprotkb/Q9LVV6" }, { "database": "iPTMnet", "id": "Q9LVV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean.", "journal": "Plant physiology", "date": "2012-05", "authors": "Meyer Louis J, Gao Jianjiong, Xu Dong, Thelen Jay J", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": 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Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9LVV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LVV6", "url": "https://www.uniprot.org/uniprotkb/Q9LVV6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction 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Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LW11", "url": "https://www.uniprot.org/uniprotkb/Q9LW11" } ], "reference": [ { "type": "PubMed", "id": 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"https://www.uniprot.org/uniprotkb/Q9LW14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LW14", "locus": {} } ], "crossref": [ { "id": "AT3G15650", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G15650", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820808", "url": "https://www.ncbi.nlm.nih.gov/gene/820808", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "F4J010", "url": "https://www.ebi.ac.uk/intact/interactors/id:F4J010*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR003140", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003140", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G15650", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G15650", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LEYPHIK", "url": "https://omabrowser.org/oma/group/LEYPHIK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LM47", "url": "https://www.orthodb.org/?gene=A0A1I9LM47", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4J010", "url": "https://www.orthodb.org/?gene=F4J010", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LW14", "url": "https://www.orthodb.org/?gene=Q9LW14", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02230", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02230", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_188186", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188186", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G15650", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G15650", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LM47", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM47-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM47-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J010", "url": "https://www.uniprot.org/uniprotkb/F4J010", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J010-1", "url": "https://www.uniprot.org/uniprotkb/F4J010-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW14", "url": "https://www.uniprot.org/uniprotkb/Q9LW14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW14-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSYSRQSMGSGSRSTRGYEFGRTYVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPNIKWICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDIEGLDASAAHIANLLSAEPTDVKVGIGGFSMGAAIALYSTTCYALGRYGTGHAYTINLRATVGLSGWLPGWRSLRSKIESSNEVARRAASIPILLAHGTSDDVVPYRFGEKSAHSLAMAGFRQTMFKPYEGLGHYTVPKEMDEVVHWLVSRLGLEGSR", "length": 255, "header": "tr|Q9LW14-1|Q9LW14_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW14-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LM47-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW14/entry#A0A1I9LM47-1", "sequence": { "sequence": "MSYSRQSMGSGLFLTYLFGSCSRSTRGYEFGRTYVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPNIKWICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDIEGLDASAAHIANLLSAEPTDVKVGIGGFSMGAAIALYSTTCYALGRYGTGHAYTINLRATVGLSGWLPGWRSLRSKIESSNEVARRAASIPILLAHGTSDDVVPYRFGEKSAHSLAMAGFRQTMFKPYEGLGHYTVPKEMDEVVHWLVSRLGLEGSR", "length": 265, "header": "tr|A0A1I9LM47-1|A0A1I9LM47_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW14-1" }, "locus": { "chromosome": "3", "start_pos": 5305814, "end_pos": 5307968, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G15650.3", "url": "https://www.ensemblgenomes.org/id/AT3G15650.3" }, { "database": "Ensembl Peptide", "id": "AT3G15650.3", "url": "https://www.ensemblgenomes.org/id/AT3G15650.3" } ] } }, { "isoform_ac": "F4J010-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW14/entry#F4J010-1", "sequence": { "sequence": "MSYSRQSMGSGSRSTRGYEFGRTYVVRPKGKHQATIVWLHGLGDNGSRILACSLITTSHFGSVSFCSSSQLLESLPLPNIKWICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDIEGLDASAAHIANLLSAEPTDVKVGIGGFSMGAAIALYSTTCYALGRYGTGHAYTINLRATVGLSGWLPGWRSLRSKIESSNEVARRAASIPILLAHGTSDDVVPYRFGEKSAHSLAMAGFRQTMFKPYEGLGHYTVPKEMDEVVHWLVSRLGLEGSR", "length": 274, "header": "tr|F4J010-1|F4J010_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW14-1" }, "locus": { "chromosome": "3", "start_pos": 5305918, "end_pos": 5307932, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G15650.2", "url": "https://www.ensemblgenomes.org/id/AT3G15650.2" }, { "database": "Ensembl Peptide", "id": "AT3G15650.2", "url": "https://www.ensemblgenomes.org/id/AT3G15650.2" } ] } }, { "isoform_ac": "Q9LW14-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW14/entry#Q9LW14-1", "sequence": { "sequence": "MSYSRQSMGSGSRSTRGYEFGRTYVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPNIKWICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDIEGLDASAAHIANLLSAEPTDVKVGIGGFSMGAAIALYSTTCYALGRYGTGHAYTINLRATVGLSGWLPGWRSLRSKIESSNEVARRAASIPILLAHGTSDDVVPYRFGEKSAHSLAMAGFRQTMFKPYEGLGHYTVPKEMDEVVHWLVSRLGLEGSR", "length": 255, "header": "tr|Q9LW14-1|Q9LW14_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW14-1" }, "locus": { "chromosome": "3", "start_pos": 5305549, "end_pos": 5307979, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G15650.1", "url": "https://www.ensemblgenomes.org/id/AT3G15650.1" }, { "database": "Ensembl Peptide", "id": "AT3G15650.1", "url": "https://www.ensemblgenomes.org/id/AT3G15650.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 67, "start_aa": "Thr", "end_pos": 67, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr67", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LW14", "url": "https://www.uniprot.org/uniprotkb/Q9LW14" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LW14", "url": "https://www.uniprot.org/uniprotkb/Q9LW14" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G15650", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G15650", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A480K5P1-1", "protein_name": "Lysophospholipase-like protein 1", "gene_name": "LYPLAL1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAAASGSMRLQRCIVSPAGRHSASLIFLHGSGDSGQGLRTWIKQVLNQDLTFQHIKVIYPTAPPRPYTPLKGGISNVWFDRFKISNDCPEHLESIDVTCQVLTDLINDEVKSGIRKNRILIGGFSMGGCMAMHLAFRNHQDVAGVFALSSFLNTASAVYQALQQSDGLLPELFQCHGTADELVLHAWGEETNSTLTSLGVSTRFHSLPGVHHELSKAELEKLKSWILTKLPE", "length": 232 }, "evidence": [ { "id": "Q9LW14", "url": "https://omabrowser.org/oma/group/Q9LW14/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0ABK0LED6-1", "protein_name": "palmitoyl-protein hydrolase", "gene_name": "Lyplal1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MHLTAEHRAAHSWPDKGAERLPKRMRTPMPAQLACVRGPVTLGAWPGALLSLFRHGCITQRCAPSALCGVPSRETQCFADLPAWLRPYTPLKGGFSNVWFDRFKISNDCPEHLESIDSMCQVLTGLIDDEVKNGIEKSRILIGGFSMGGCMAMHLAYRKHPGVAGVFVLSGFLNKASAVYQDLQQGGRAFPELFQCHGTADDLVLHAWGEETNSNLKSLGVSTTFHSLPDVYHELSRPELERLNCHEAARRDRWAE", "length": 256 }, "evidence": [ { "id": "Q9LW14", "url": "https://omabrowser.org/oma/group/Q9LW14/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3UFF7-1", "protein_name": "Lysophospholipase-like protein 1", "gene_name": "Lyplal1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAVPSAVHLPRCVVSPTGRHSASLIFLHGSGHSGQGQREWIKHVLNQDLTFQHIKIIYPTAPSRPYTPLKGGLSNVWFDRFKISMDCPEHLESIDSMCQVLSGLIDEEVKTGIQKSRILIGGFSMGGCMAMHLAYRSHPDVAGVFVLSGFLNKASVVYQDLQQGGRMLPELFQCHGSADNLVLHAWGKETNSKLKSLGVSTTFHSLPNLNHELNKTELEKLKSWILTRLPGETDGQSE", "length": 239 }, "evidence": [ { "id": "Q9LW14", "url": "https://omabrowser.org/oma/group/Q9LW14/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5VWZ2-1", "protein_name": "Lysophospholipase-like protein 1", "gene_name": "LYPLAL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAIHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLPGEMEKQK", "length": 237 }, "evidence": [ { "id": "Q9LW14", "url": "https://omabrowser.org/oma/group/Q9LW14/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VGV9-1", "protein_name": "palmitoyl-protein hydrolase", "gene_name": "Dmel\\CG6567", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MKPALTTVNATGKHTASVIFFHGSGDTGPNVLEWVRFLIGRNLEYPHIKIIYPTAPKQKYTPLDGELSNVWFDRKSVNIAASESKKSMSQCYDAVNQLIDEEVASGIPLNRIVVGGFSMGGALALHTGYHLRRSLAGVFAHSSFLNRGSVVYDSLANGKDESFPELRMYHGERDTLVPKDWGLETFENLTKLGVKGTFHPLRNTLHELKTASITDLQQWIYEKLPPLENQVQNKL", "length": 235 }, "evidence": [ { "id": "Q9LW14", "url": "https://omabrowser.org/oma/group/Q9LW14/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9LW14", "url": "https://www.uniprot.org/uniprotkb/Q9LW14" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LW14", "url": "https://www.uniprot.org/uniprotkb/Q9LW14" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 45, "end_pos": 47, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LW14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW14" }, { "id": "PF02230", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02230" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phospholipase/carboxylesterase/thioesterase", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 245, "start_aa": "Tyr", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 67 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 45, "end_pos": 47 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { 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"evidence": [ { "id": "NP_566521", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566521" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LW16", "url": "https://www.uniprot.org/uniprotkb/Q9LW16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LW16", "locus": {} } ], "crossref": [ { "id": "820805", "url": "https://www.ncbi.nlm.nih.gov/gene/820805", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G15630", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G15630", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MESATFH", "url": "https://omabrowser.org/oma/group/MESATFH/", 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"database": "Ensembl Peptide", "id": "AT3G15630.1", "url": "https://www.ensemblgenomes.org/id/AT3G15630.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, 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"PTHR34119", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34119", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34119:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34119:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001326313", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326313", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G26910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LW19", "url": "https://www.uniprot.org/uniprotkb/Q9LW19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW19-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW19-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKASIEKLRRLTSHSHKVDVKEKGDVMATTQIDELDRAGKDMQDMRECYDRLLAAAAATANSAYEFSESLGEMGSCLEQIAPHNDEESSRILFMLGKVQSELQRLLDTYRSHIFETITSPSEALLKDLRYVEDMKQQCDGKRNVYEMSLVKEKGRPKSSKGERHIPPESRPAYSEFHDEATMCIFRLKSLKEGQARSLLIQAVRHHTAQMRLFHTGLKSLEAVERHVKVAVEKQHIDCDLSVHGNEMEASEDDDDDGRYMNREGELSFDYRTNEQKVEASSLSTPWATKMDDTDLSFPRPSTTRPAAVNADHREEYPVSTRDKYLSSHSAPLFPEKKPDVSERLRQANPSFNAYVLPTPNDSRYSKPVSQALNPRPTNHSAGNIWHSSPLEPIKSGKDGKDAESNSFYGRLPRPSTTDTHHHQQQAAGRHAFSGPLRPSSTKPITMADSYSGAFCPLPTPPVLQSHPHSSSSPRVSPTASPPPASSPRLNELHELPRPPGHFAPPPRRAKSPGLVGHSAPLTAWNQERSTVTVAVPSATNIVASPLPVPPLVVPRSYSIPSRNQRVVSQRLVERRDDIVASPPLTPMSLSRPLPQATGVAQTSQIRGIIDSFKLILCVYVK", "length": 621, "header": "tr|Q9LW19-1|Q9LW19_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW19-1" }, "isoforms": [ { "isoform_ac": "Q9LW19-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW19/entry#Q9LW19-1", "sequence": { "sequence": "MKASIEKLRRLTSHSHKVDVKEKGDVMATTQIDELDRAGKDMQDMRECYDRLLAAAAATANSAYEFSESLGEMGSCLEQIAPHNDEESSRILFMLGKVQSELQRLLDTYRSHIFETITSPSEALLKDLRYVEDMKQQCDGKRNVYEMSLVKEKGRPKSSKGERHIPPESRPAYSEFHDEATMCIFRLKSLKEGQARSLLIQAVRHHTAQMRLFHTGLKSLEAVERHVKVAVEKQHIDCDLSVHGNEMEASEDDDDDGRYMNREGELSFDYRTNEQKVEASSLSTPWATKMDDTDLSFPRPSTTRPAAVNADHREEYPVSTRDKYLSSHSAPLFPEKKPDVSERLRQANPSFNAYVLPTPNDSRYSKPVSQALNPRPTNHSAGNIWHSSPLEPIKSGKDGKDAESNSFYGRLPRPSTTDTHHHQQQAAGRHAFSGPLRPSSTKPITMADSYSGAFCPLPTPPVLQSHPHSSSSPRVSPTASPPPASSPRLNELHELPRPPGHFAPPPRRAKSPGLVGHSAPLTAWNQERSTVTVAVPSATNIVASPLPVPPLVVPRSYSIPSRNQRVVSQRLVERRDDIVASPPLTPMSLSRPLPQATGVAQTSQIRGIIDSFKLILCVYVK", "length": 621, "header": "tr|Q9LW19-1|Q9LW19_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW19-1" }, "locus": { "chromosome": "3", "start_pos": 9914959, "end_pos": 9918810, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26910.3", "url": "https://www.ensemblgenomes.org/id/AT3G26910.3" }, { "database": "Ensembl Peptide", "id": "AT3G26910.3", "url": "https://www.ensemblgenomes.org/id/AT3G26910.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 459, "start_aa": "Thr", "end_pos": 459, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr459", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 478, "start_aa": "Thr", "end_pos": 478, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr478", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo 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"AT3G26770", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26770", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LW34", "url": "https://www.uniprot.org/uniprotkb/Q9LW34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW34-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW34-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAIVLIRSIVRNFKRPATAASAAYSTGGGGGGCTCTSKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDGKYVTGHNLVVDGGMTAFKIAGFPFPSDS", "length": 306, "header": "tr|Q9LW34-1|Q9LW34_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW34-1" }, "isoforms": [ { "isoform_ac": "Q9LW34-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW34/entry#Q9LW34-1", "sequence": { "sequence": "MAAIVLIRSIVRNFKRPATAASAAYSTGGGGGGCTCTSKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDGKYVTGHNLVVDGGMTAFKIAGFPFPSDS", "length": 306, "header": "tr|Q9LW34-1|Q9LW34_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW34-1" }, "locus": { "chromosome": "3", "start_pos": 9845334, "end_pos": 9847200, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26770.1", "url": "https://www.ensemblgenomes.org/id/AT3G26770.1" }, { "database": "Ensembl Peptide", "id": "AT3G26770.1", "url": "https://www.ensemblgenomes.org/id/AT3G26770.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 132, "start_aa": "Thr", "end_pos": 132, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr132", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 22, "end_pos": 22, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LW34", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LW34" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser22" }, { "start_pos": 35, "end_pos": 35, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LW34", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LW34" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Thr35" }, { "start_pos": 37, "end_pos": 37, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LW34", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LW34" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Thr37" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LW34", "url": "https://www.uniprot.org/uniprotkb/Q9LW34" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LW34", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LW34" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LW34", "url": "https://www.uniprot.org/uniprotkb/Q9LW34" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G26770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26770", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9LW34", "url": "https://www.uniprot.org/uniprotkb/Q9LW34" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 132 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 22, 35, 37 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { 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"sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LW35-1", "uniprot_ac": "Q9LW35", "uniprot_id": "Q9LW35_ARATH", "mass": { "chemical_mass": 31700.0, "monoisotopic_mass": 31700.0 }, "refseq": { "ac": "NP_189311", "name": "NAD(P)-binding Rossmann-fold superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189311" }, "gene_names": [], "protein_names": [ { "name": "NAD(P)-binding Rossmann-fold superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_189311", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189311" }, { "id": "Q9LW35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW35/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LW35", "url": "https://www.uniprot.org/uniprotkb/Q9LW35" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LW35", "locus": {} } ], "crossref": [ { "id": "AT3G26760", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G26760", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822289", "url": "https://www.ncbi.nlm.nih.gov/gene/822289", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G26760", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G26760", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TWHAWQK", "url": "https://omabrowser.org/oma/group/TWHAWQK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43180", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43180", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43180:SF55", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43180:SF55", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189311", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189311", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G26760", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G26760", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LW35", "url": "https://www.uniprot.org/uniprotkb/Q9LW35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW35-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWRSFARSFKLINVPNGLISKPIRSTLLYSTSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALYLASDDAKFVTGHNLVVDGGFTCFKSLNLPSA", "length": 300, "header": "tr|Q9LW35-1|Q9LW35_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW35-1" }, "isoforms": [ { "isoform_ac": "Q9LW35-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW35/entry#Q9LW35-1", "sequence": { "sequence": "MWRSFARSFKLINVPNGLISKPIRSTLLYSTSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALYLASDDAKFVTGHNLVVDGGFTCFKSLNLPSA", "length": 300, "header": "tr|Q9LW35-1|Q9LW35_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LW35-1" }, "locus": { "chromosome": "3", "start_pos": 9843460, "end_pos": 9845176, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G26760.1", "url": "https://www.ensemblgenomes.org/id/AT3G26760.1" }, { "database": "Ensembl Peptide", "id": "AT3G26760.1", "url": "https://www.ensemblgenomes.org/id/AT3G26760.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, 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Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LW35", "url": "https://www.uniprot.org/uniprotkb/Q9LW35" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LW35", "url": "https://www.uniprot.org/uniprotkb/Q9LW35" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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At3g23420 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LW55-1" }, "locus": { "chromosome": "3", "start_pos": 8386319, "end_pos": 8387366, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23420.2", "url": "https://www.ensemblgenomes.org/id/AT3G23420.2" }, { "database": "Ensembl Peptide", "id": "AT3G23420.2", "url": "https://www.ensemblgenomes.org/id/AT3G23420.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structural analysis of Arabidopsis thaliana chromosome 3. 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"https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03571", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821916", "url": "https://www.ncbi.nlm.nih.gov/gene/821916", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013809", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013809", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G23350", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23350", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NWGANMQ", "url": "https://omabrowser.org/oma/group/NWGANMQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12276", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12276", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12276:SF95", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12276:SF95", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01417", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01417", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001325534", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325534", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23350", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23350", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J420", "url": "https://www.uniprot.org/uniprotkb/F4J420", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J420-1", "url": "https://www.uniprot.org/uniprotkb/F4J420-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW61", "url": "https://www.uniprot.org/uniprotkb/Q9LW61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW61-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW61-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMGTLWFGDFKKQASSFIQDKYNVARLVLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTVEYWRIVDVLHRKIGKDEREIKNWREAYKAMVLLEFLLMHGPIHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKADQIQTLLLGKEELREARLKALKITSQINGFGNSTTFSPSPNSLSNSFSSLKTSNSTPTKRIDLISESYSLIDDENKLSEKDQASKETLVSGICTKLAGFSPLNKFQGGRTKAAKFQTLSNVERVSSKCYDRCNSIGY", "length": 282, "header": "tr|Q9LW61-1|Q9LW61_ARATH Isoform 1 of ENTH/VHS family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LW61-1" }, "isoforms": [ { "isoform_ac": "F4J420-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW61/entry#F4J420-1", "sequence": { "sequence": "MGTLWFGDFKKQASSFIQDKYNVARLVLTDVTEAELLVEEVTNGDPSSPDAKTMTKIAEASFDTVEYWRIVDVLHRKIGKDEREIKNWREAYKAMVLLEFLLMHGPIHLPHDFLYDLDHFRFLSTFQYVDNNGFDWGAQVQKKADQIQTLLLGKEELREARLKALKITSQINGFGNSTTFSPSPNSLSNSFSSLKTSNSTPTKRIDLISESYSLIDDENKLSEKDQASKETLVSGICTKLAGFSPLNKFQGGRTKAAKFQTLSNVERVSSKCYDRCNSIGY", "length": 281, "header": "tr|F4J420-1|F4J420_ARATH Computationally mapped isoform of ENTH/VHS family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LW61-1" }, "locus": { "chromosome": "3", "start_pos": 8354104, "end_pos": 8355404, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23350.1", "url": "https://www.ensemblgenomes.org/id/AT3G23350.1" }, { "database": "Ensembl Peptide", "id": "AT3G23350.1", "url": "https://www.ensemblgenomes.org/id/AT3G23350.1" } ] } }, { "isoform_ac": "Q9LW61-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW61/entry#Q9LW61-1", "sequence": { "sequence": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566726", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566726", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G23320", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G23320", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LW65-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW65-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDTKEWLDVKHKNDDNVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLRYYLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAKKAVANHINHTLYHFCPRFLMSFVNKDAEHVN", "length": 191, "header": "tr|Q9LW65-1|Q9LW65_ARATH Isoform 1 of Polynucleotidyl transferase, ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MLM24.4 PE=4 SV=1 CANONICAL=Q9LW65-1" }, "isoforms": [ { "isoform_ac": "Q9LW65-1", "url": "https://www.uniprot.org/uniprotkb/Q9LW65/entry#Q9LW65-1", "sequence": { "sequence": "MDTKEWLDVKHKNDDNVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRLRYYLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAKKAVANHINHTLYHFCPRFLMSFVNKDAEHVN", "length": 191, "header": "tr|Q9LW65-1|Q9LW65_ARATH Isoform 1 of Polynucleotidyl transferase, ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN=MLM24.4 PE=4 SV=1 CANONICAL=Q9LW65-1" }, "locus": { "chromosome": "3", "start_pos": 8344629, "end_pos": 8345204, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G23320.1", "url": "https://www.ensemblgenomes.org/id/AT3G23320.1" }, { "database": "Ensembl Peptide", "id": "AT3G23320.1", "url": "https://www.ensemblgenomes.org/id/AT3G23320.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G23320", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G23320", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "pmid": "" }, { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "Q9LW65", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 109, "end_pos": 111, "annotation": "n_glycosylation_sequon" }, { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LW65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW65" }, { "id": "PF13456", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNase H type-1", "eco_id": "ECO_0000259", "start_pos": 41, "end_pos": 162, "start_aa": "Asn", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], 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CANONICAL=Q9LX45-1" }, "locus": { "chromosome": "3", "start_pos": 21903839, "end_pos": 21905188, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59260.1", "url": "https://www.ensemblgenomes.org/id/AT3G59260.1" }, { "database": "Ensembl Peptide", "id": "AT3G59260.1", "url": "https://www.ensemblgenomes.org/id/AT3G59260.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, 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Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LX45", "url": "https://www.uniprot.org/uniprotkb/Q9LX45" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LX45", "url": "https://www.uniprot.org/uniprotkb/Q9LX45" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G59260", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59260", 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reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LX46", "url": "https://www.uniprot.org/uniprotkb/Q9LX46" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G59250", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59250", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" }, { "start_pos": 240, "end_pos": 242, "annotation": "n_glycosylation_sequon" }, { "start_pos": 249, "end_pos": 251, "annotation": "n_glycosylation_sequon" }, { 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} ] } ], "protein_names": [ { "name": "Putative F-box/FBD/LRR-repeat protein At3g59240", "type": "recommended", "evidence": [ { "id": "Q9LX47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX47/entry#names_and_taxonomy" } ] }, { "name": "RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191483", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191483" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LX47", "url": "https://www.uniprot.org/uniprotkb/Q9LX47" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LX47", "locus": {} } ], "crossref": [ { "id": "Q9LX47", "url": "https://alphafold.ebi.ac.uk/entry/Q9LX47", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G59240", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59240", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825093", "url": "https://www.ncbi.nlm.nih.gov/gene/825093", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G59240", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59240", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CIFRWIS", "url": "https://omabrowser.org/oma/group/CIFRWIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LX47", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LX47", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191483", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191483", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59240", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59240", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": 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"database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LX53", "url": "https://www.uniprot.org/uniprotkb/Q9LX53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX53-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX53-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKERIRFLQVLWILWIEYWHCKAILLSKHRRRWIHKSFKLFVNRLMALQGNAPLNRFSLKCKVRCDSACVDGWIINVLDRGVLDLDLNISSESDYKLPSEVFLNKTLVRLKLGGKDEFIIDVEEVFLPKLKTLYLHGFVCFEDSGVACAKLISGCPVLEELVMINLMWGLMDVCSVSNPTLKRVTICSEIIDYNPQSVSFDTPNLVYLEFTDVVAIKYPKVNLDSLVDARLGLRLTPCQTTKARRSVKSVGQGMMGNAADFLMGISNVKILYLSFDTLEVLNFCCKTIPLFNNLTYLTIETNEDVGWESLSNILENCPNLETIIFKGLHYRDTNQCWDERYRFKDTNKCFEEDADMCMCKPWEATPICLSSSSVKILEVLKFGEVTSYKDDMDRQTEVIKFFLETMPNLEQVILYYDTPFDDDLSILSTELQMLEKVASPKCKIQVISDNISYSSTVHSSSSTSGLVFLNNTFPV", "length": 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"MDSVSKDMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVKNTLHEKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNSPLDKFSLKMVDGHDPVDPDSVVPWIHKVLVRGVSDLHLVVDMNEWTSDPLPSRIFLSETLVKLTIKIRDGPFIDVKHVHLPKLKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWTSFTVSVATLKRLTFCCQKMSSFGYMHDDENPNNVSFDTPNLVYLEYAQVIANNYPKVNFDLLVEAKIDIWMTVDQIREVRLRKNEVNCMVGNATDFIVGLRNVRVLYLSPETLEVLTYCCKQIPIFENLSHLTIKSDPNVGWKPLTKLLKNSPKLETLVFQGLLHRDNKEDVAISSSSVKVLKIFLSGDKLKKQIEKVKHFLKTMPRLEQLVFYYDVKVLSQLHMLSRLASPKCKIHLIPSRESV", "length": 473, "header": "sp|Q9LX54-1|FBL62_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g59170 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX54-1" }, "isoforms": [ { "isoform_ac": "Q9LX54-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX54/entry#Q9LX54-1", "sequence": { "sequence": "MDSVSKDMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVKNTLHEKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNSPLDKFSLKMVDGHDPVDPDSVVPWIHKVLVRGVSDLHLVVDMNEWTSDPLPSRIFLSETLVKLTIKIRDGPFIDVKHVHLPKLKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWTSFTVSVATLKRLTFCCQKMSSFGYMHDDENPNNVSFDTPNLVYLEYAQVIANNYPKVNFDLLVEAKIDIWMTVDQIREVRLRKNEVNCMVGNATDFIVGLRNVRVLYLSPETLEVLTYCCKQIPIFENLSHLTIKSDPNVGWKPLTKLLKNSPKLETLVFQGLLHRDNKEDVAISSSSVKVLKIFLSGDKLKKQIEKVKHFLKTMPRLEQLVFYYDVKVLSQLHMLSRLASPKCKIHLIPSRESV", "length": 473, "header": "sp|Q9LX54-1|FBL62_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g59170 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX54-1" }, "locus": { "chromosome": "3", "start_pos": 21878167, "end_pos": 21879799, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59170.1", "url": "https://www.ensemblgenomes.org/id/AT3G59170.1" }, { "database": "Ensembl Peptide", "id": "AT3G59170.1", "url": "https://www.ensemblgenomes.org/id/AT3G59170.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 432, "end_pos": 432, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LX54", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LX54" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr432" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LX54", "url": "https://www.uniprot.org/uniprotkb/Q9LX54" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LX54", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LX54" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LX54", "url": "https://www.uniprot.org/uniprotkb/Q9LX54" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G59170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 320, "end_pos": 322, "annotation": "n_glycosylation_sequon" }, { "start_pos": 356, "end_pos": 358, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LX54-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 473, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LX54-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LX54" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LX54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX54" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 6, "end_pos": 54, "start_aa": "Lys", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 432 ], "sequon_annotation_sites": [ { "start_pos": 261, "end_pos": 263 }, { "start_pos": 320, "end_pos": 322 }, { "start_pos": 356, "end_pos": 358 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LX55-1", "uniprot_ac": "Q9LX55", "uniprot_id": "FBL61_ARATH", "mass": { "chemical_mass": 52886.0, "monoisotopic_mass": 52886.0 }, "refseq": { "ac": "NP_191475", "name": "F-box/RNI-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191475" }, "gene_names": [ { "name": "F17J16.200", "type": "synonym", "evidence": [ { "id": "Q9LX55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX55" } ] }, { "name": "F25L23_20", "type": "synonym", "evidence": [ { "id": "Q9LX55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX55" } ] } ], "protein_names": [ { "name": "Putative F-box/LRR-repeat protein At3g59160", "type": "recommended", "evidence": [ { "id": "Q9LX55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX55/entry#names_and_taxonomy" } ] }, { "name": "F-box/RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191475", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191475" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LX55", "url": "https://www.uniprot.org/uniprotkb/Q9LX55" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LX55", "locus": {} } ], "crossref": [ { "id": "Q9LX55", "url": "https://alphafold.ebi.ac.uk/entry/Q9LX55", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G59160", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59160", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825085", "url": "https://www.ncbi.nlm.nih.gov/gene/825085", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G59160", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59160", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FENDIPM", "url": "https://omabrowser.org/oma/group/FENDIPM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LX55", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LX55", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191475", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59160", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59160", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LX55", "url": "https://www.uniprot.org/uniprotkb/Q9LX55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX55-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX55-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVDSKRMDSGSKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNPLHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVAPWIHKVLVRGVSDLHLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEAKIDIWMTNDQLDEVRIRDIYEKNVMVGNATDLIVGIRNVRVLCLSADTLEVLTYCCKQIPIFNNLTHVTIQSTPKVGWKSLLKLLKNSPKLQTLVFQGLLHRDTKEEGVAIIKIEKQIEKVKHFLETMPHLEQLVLHYDSSIDGDMKQLLMLSSLASPKCKVQLIPLVT", "length": 464, "header": "sp|Q9LX55-1|FBL61_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g59160 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX55-1" }, "isoforms": [ { "isoform_ac": "Q9LX55-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX55/entry#Q9LX55-1", "sequence": { "sequence": "MVDSKRMDSGSKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNPLHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVAPWIHKVLVRGVSDLHLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEAKIDIWMTNDQLDEVRIRDIYEKNVMVGNATDLIVGIRNVRVLCLSADTLEVLTYCCKQIPIFNNLTHVTIQSTPKVGWKSLLKLLKNSPKLQTLVFQGLLHRDTKEEGVAIIKIEKQIEKVKHFLETMPHLEQLVLHYDSSIDGDMKQLLMLSSLASPKCKVQLIPLVT", "length": 464, "header": "sp|Q9LX55-1|FBL61_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g59160 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX55-1" }, "locus": { "chromosome": "3", "start_pos": 21875023, "end_pos": 21876690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59160.1", "url": "https://www.ensemblgenomes.org/id/AT3G59160.1" }, { 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"https://www.ebi.ac.uk/interpro/entry/IPR020904", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G46170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DYTMTDF", "url": "https://omabrowser.org/oma/group/DYTMTDF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44375", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44375", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44375:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44375:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00106", "database": 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"AT3G46170.1", "url": "https://www.ensemblgenomes.org/id/AT3G46170.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro 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"MVTSSQVMLMPAHDSAKPTGFGIMVTSLDLLRDHQKVIHTLWFIDDVVARELGGFDGFCRRERVLLLFVDSTNTTLSFTRNDMTCVPRQGGADSDHWLFKRHLALLLPLSFAQVYEGFISFYEEEDKHISWDIKSCSSSSHQ", "length": 142, "header": "tr|Q9LX80-1|Q9LX80_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX80-1" }, "locus": { "chromosome": "3", "start_pos": 16949531, "end_pos": 16950145, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G46150.1", "url": "https://www.ensemblgenomes.org/id/AT3G46150.1" }, { "database": "Ensembl Peptide", "id": "AT3G46150.1", "url": "https://www.ensemblgenomes.org/id/AT3G46150.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny 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Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LX80", "url": "https://www.uniprot.org/uniprotkb/Q9LX80" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LX80", "url": "https://www.uniprot.org/uniprotkb/Q9LX80" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G46150", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46150", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 73, "end_pos": 75, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 73, "end_pos": 75 } ] }, "class_list": [], "section_stats": [ { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LX81-1", "uniprot_ac": "Q9LX81", "uniprot_id": "Q9LX81_ARATH", "mass": { "chemical_mass": 42454.0, "monoisotopic_mass": 42454.0 }, "refseq": { "ac": "NP_190200", "name": "Protein kinase superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190200" }, "gene_names": [], "protein_names": [ { "name": "Protein kinase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_190200", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190200" }, { "id": "Q9LX81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX81/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LX81", "url": 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Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052751", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052751", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G46140", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46140", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RVWSECK", "url": "https://omabrowser.org/oma/group/RVWSECK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR48011", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48011", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48011:SF85", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48011:SF85", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190200", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190200", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G46140", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G46140", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LX81", "url": "https://www.uniprot.org/uniprotkb/Q9LX81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX81-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEMIETEISFSGYLKRYGHLKFIELSDPPLTKRPRYSPSVIPPLPDQNPIFTLKLSPIILKNNKRKRFTPKSSSSRSVEEITKQVFDGVVRKSSSWIKSEFLGRGSYGSVYLATSKKAKTKTTMAIKSAEISRASSLMDEERILTRLSSPFIVRCYGHEIAREETLFGGERTNYNLILEYCSGKSLFDLVNDNLGGLSEKDVKLLARDILYGLDCIHRANIIHCDIKPENIFLTPVENRIRPSGYVAKIGDFGLALEKGSSEYEKASGHRRGTTRYMSPELIRHGIVDYAVDTWAFGCTVLEMLTGQQVWGEHSDLGSVDWDILIGQSCYIPYIPDWLSEEAQHFLSRCLKRDPASRWGIGALLNHPFLQCGSIIV", "length": 376, "header": "tr|Q9LX81-1|Q9LX81_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9LX81-1" }, "isoforms": [ { "isoform_ac": "Q9LX81-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX81/entry#Q9LX81-1", "sequence": { "sequence": 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and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, 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"https://www.ncbi.nlm.nih.gov/protein/NP_190191", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G46050", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G46050", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LX87", "url": "https://www.uniprot.org/uniprotkb/Q9LX87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX87-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX87-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTKEKNKSSNSPPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSCIGKTESFLYVCLDLHRNCYPDCPPRWFIVSPITKQKLKPIPSVTCQSSTVVSIGSKIYIIGGFVDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIEDWGEVYDPKTQTWEPVLPTTLDLTVQMSVVPGSLVMSGKVYDMNGLKLNFQKNICLVEIENMMCQTKVCEGVLVWCEPEEDRGWCPVDGLEGLPNRPTSPGYLTSVAHSDRGRRVTVWWESAVLHRLGPKWTKECKTEIWCAEISFERRGVGKVCGFVEWSKNVFTKDDYKTYKLPASLSDFFLNSTIVTY", "length": 370, "header": "sp|Q9LX87-1|FBK74_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At3g46050 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX87-1" }, "isoforms": [ { "isoform_ac": "Q9LX87-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX87/entry#Q9LX87-1", "sequence": { "sequence": "MTTKEKNKSSNSPPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSCIGKTESFLYVCLDLHRNCYPDCPPRWFIVSPITKQKLKPIPSVTCQSSTVVSIGSKIYIIGGFVDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIEDWGEVYDPKTQTWEPVLPTTLDLTVQMSVVPGSLVMSGKVYDMNGLKLNFQKNICLVEIENMMCQTKVCEGVLVWCEPEEDRGWCPVDGLEGLPNRPTSPGYLTSVAHSDRGRRVTVWWESAVLHRLGPKWTKECKTEIWCAEISFERRGVGKVCGFVEWSKNVFTKDDYKTYKLPASLSDFFLNSTIVTY", "length": 370, "header": "sp|Q9LX87-1|FBK74_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At3g46050 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LX87-1" }, "locus": { "chromosome": "3", "start_pos": 16916072, "end_pos": 16917184, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G46050.1", "url": "https://www.ensemblgenomes.org/id/AT3G46050.1" }, { "database": "Ensembl Peptide", "id": "AT3G46050.1", "url": "https://www.ensemblgenomes.org/id/AT3G46050.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LX87", "url": "https://www.uniprot.org/uniprotkb/Q9LX87" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LX87", "url": "https://www.uniprot.org/uniprotkb/Q9LX87" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G46050", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46050", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": 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"UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX89" } ] } ], "protein_names": [ { "name": "F-box protein At5g10340", "type": "recommended", "evidence": [ { "id": "Q9LX89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX89/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LX89", "url": "https://www.uniprot.org/uniprotkb/Q9LX89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LX89", "locus": {} } ], "crossref": [ { "id": "Q9LX89", "url": "https://alphafold.ebi.ac.uk/entry/Q9LX89", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT5G10340", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G10340", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "830898", "url": "https://www.ncbi.nlm.nih.gov/gene/830898", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G10340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G10340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SHEGETM", "url": "https://omabrowser.org/oma/group/SHEGETM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LX89", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LX89", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT5G10340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G10340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LX89", "url": "https://www.uniprot.org/uniprotkb/Q9LX89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LX89-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX89-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTSRYFVRKTTIPPPKRPRRIHVSPCHDTPILFGDEVKRCPWGHLAYGGSCLQSITLRDSETSMEELLPHDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIHHLSQSSGDPHVLLVSLYDPCARQQDPSISSFEALRTFLVESSAASVQIPTPWEDKLYFVCNTSCDGLICLFSFYELPSIVVNPTTRWHRTFPKCNYQLVAADKGERHECFKVACPTPGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYVFPASPHLILHTQDPVYVDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFLNVSDEYYIVMCNLGDRLCVSEQKWPNQVIWSLDDSDHKTWKQIYSIDLIITSSLFFSAIFAFTPLAVLDKDKLLFYDSTHGDAFLTHDPDTKSYDLPYTSNRCATVVCYFPSLISIL", "length": 445, "header": "sp|Q9LX89-1|FB255_ARATH Isoform 1 of F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LX89-1" }, "isoforms": [ { "isoform_ac": "Q9LX89-1", "url": "https://www.uniprot.org/uniprotkb/Q9LX89/entry#Q9LX89-1", "sequence": { "sequence": "MGTSRYFVRKTTIPPPKRPRRIHVSPCHDTPILFGDEVKRCPWGHLAYGGSCLQSITLRDSETSMEELLPHDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIHHLSQSSGDPHVLLVSLYDPCARQQDPSISSFEALRTFLVESSAASVQIPTPWEDKLYFVCNTSCDGLICLFSFYELPSIVVNPTTRWHRTFPKCNYQLVAADKGERHECFKVACPTPGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYVFPASPHLILHTQDPVYVDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFLNVSDEYYIVMCNLGDRLCVSEQKWPNQVIWSLDDSDHKTWKQIYSIDLIITSSLFFSAIFAFTPLAVLDKDKLLFYDSTHGDAFLTHDPDTKSYDLPYTSNRCATVVCYFPSLISIL", "length": 445, "header": "sp|Q9LX89-1|FB255_ARATH Isoform 1 of F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LX89-1" }, "locus": { "chromosome": "5", "start_pos": 3253122, "end_pos": 3255045, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G10340.1", "url": "https://www.ensemblgenomes.org/id/AT5G10340.1" }, { "database": "Ensembl Peptide", "id": "AT5G10340.1", "url": "https://www.ensemblgenomes.org/id/AT5G10340.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": 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Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXD0", "url": "https://www.uniprot.org/uniprotkb/Q9LXD0" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, 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protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXH7-1" }, "locus": { "chromosome": "3", "start_pos": 16441023, "end_pos": 16442098, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44980.1", "url": "https://www.ensemblgenomes.org/id/AT3G44980.1" }, { "database": "Ensembl Peptide", "id": "AT3G44980.1", "url": "https://www.ensemblgenomes.org/id/AT3G44980.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 142, "start_aa": "Thr", "end_pos": 142, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr142", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 121, 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Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXH7", "url": "https://www.uniprot.org/uniprotkb/Q9LXH7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXH7", "url": "https://www.uniprot.org/uniprotkb/Q9LXH7" } ], "reference": [ { "type": "PubMed", "id": "27862469", 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Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXI6", "url": "https://www.uniprot.org/uniprotkb/Q9LXI6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXI6", "url": "https://www.uniprot.org/uniprotkb/Q9LXI6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G52790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52790", "resource": "KEGG Pathway" } ], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXJ3-1", "uniprot_ac": "Q9LXJ3", "uniprot_id": "Q9LXJ3_ARATH", "mass": { "chemical_mass": 31694.0, "monoisotopic_mass": 31694.0 }, "refseq": { "ac": "NP_190839", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190839" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LXJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_190839", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190839" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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"PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34120:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34120:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190839", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G52710", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G52710", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXJ3", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXJ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPQVVASACTGGSDRKISCETLADDNEDSPHNSKIRPVSISAVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNSSAPISNPNTNPNSSSHRISLKSKASIIRLPKPQKTCFNEAKKRRNCRIARTLMIPKRIGSRLKSDPTLSEPCSPKVSCIGRVRSKRDRSRRMQRQKSGRTNSFKDKPVPVKKPGFFASFRAIFRTGGGCKDLSASGAHAPRRDVVVSPPRVSVRRSTDIRGRLPPGDVGKSSPQRNSTGSRRSIDGGEPVLPGLGGMTRFTSGRRPDLLVEV", "length": 289, "header": "tr|Q9LXJ3-1|Q9LXJ3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXJ3-1" }, "isoforms": [ { "isoform_ac": "Q9LXJ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3/entry#Q9LXJ3-1", "sequence": { "sequence": "MPQVVASACTGGSDRKISCETLADDNEDSPHNSKIRPVSISAVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNSSAPISNPNTNPNSSSHRISLKSKASIIRLPKPQKTCFNEAKKRRNCRIARTLMIPKRIGSRLKSDPTLSEPCSPKVSCIGRVRSKRDRSRRMQRQKSGRTNSFKDKPVPVKKPGFFASFRAIFRTGGGCKDLSASGAHAPRRDVVVSPPRVSVRRSTDIRGRLPPGDVGKSSPQRNSTGSRRSIDGGEPVLPGLGGMTRFTSGRRPDLLVEV", "length": 289, "header": "tr|Q9LXJ3-1|Q9LXJ3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXJ3-1" }, "locus": { "chromosome": "3", "start_pos": 19534585, "end_pos": 19536018, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52710.1", "url": "https://www.ensemblgenomes.org/id/AT3G52710.1" }, { "database": "Ensembl Peptide", "id": "AT3G52710.1", "url": "https://www.ensemblgenomes.org/id/AT3G52710.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 146, "end_pos": 146, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ], "site_lbl": "Ser146" }, { "start_pos": 150, "end_pos": 150, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser150" }, { "start_pos": 224, "end_pos": 224, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser224" }, { "start_pos": 229, "end_pos": 229, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser229" }, { "start_pos": 260, "end_pos": 260, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser260" }, { "start_pos": 96, "end_pos": 96, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" } ], "site_lbl": "Ser96" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ3", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry.", "journal": "Mol. Cell. Proteomics", "date": "2003", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ3", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3" } ], "reference": [ { "type": "PubMed", "id": "14506206", "url": "https://glygen.org/publication/PubMed/14506206" } ] }, { "title": "Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.", "journal": "Plant Cell", "date": "2004", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ3", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ3" }, { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" } ], "reference": [ { "type": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ3" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": 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Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ8", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ8" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXJ8", "url": "https://www.uniprot.org/uniprotkb/Q9LXJ8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ8" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LXJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXJ8" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G52660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52660", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF04366", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189909", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189909", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G43230", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G43230", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXL1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXL1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATLNGKASPYSEENIKFKYDDYDDDDDDDDGSGSGSGGGYEDGPKWSVQSIPTKKEVEYPIIDSGDYVDDGYDSSGELSTTTTPPIQGNEKPEVNLKNVLTGLIAIVTGRNKNPLDQKNPSSNVSFLGSGTNGDTFVHSSVYIPSAPPLLEPSGINYSVYKELLEAEPPEWLPDSLASTCMQCSTPFTAITCGRHHCRFCGGIFCRNCSKGRCLMPSRFRERNPQRVCDSCYERLDPLQCVLINSISNAVQVAKHDVVDWTCSRGWLNLPVGLSMEDEIYKAANTLRGYCQVARLDPEKSIPHAVLSRAKGLAIITVAKAGALLSYKLGTGLVISRRPDGSWSAPSAILSVGLGWGAQIGGELMDFIIVLHDVKAVKTFCSRMHFSLGAGCSAAAGPIGRVLEADLRAGDKGSGVCYTYSRSKGAFVGVSLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRELYARLRP", "length": 485, "header": "tr|Q9LXL1-1|Q9LXL1_ARATH Isoform 1 of RING/FYVE/PHD-type zinc finger family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXL1-1" }, "isoforms": [ { "isoform_ac": "Q9LXL1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1/entry#Q9LXL1-1", "sequence": { "sequence": "MATLNGKASPYSEENIKFKYDDYDDDDDDDDGSGSGSGGGYEDGPKWSVQSIPTKKEVEYPIIDSGDYVDDGYDSSGELSTTTTPPIQGNEKPEVNLKNVLTGLIAIVTGRNKNPLDQKNPSSNVSFLGSGTNGDTFVHSSVYIPSAPPLLEPSGINYSVYKELLEAEPPEWLPDSLASTCMQCSTPFTAITCGRHHCRFCGGIFCRNCSKGRCLMPSRFRERNPQRVCDSCYERLDPLQCVLINSISNAVQVAKHDVVDWTCSRGWLNLPVGLSMEDEIYKAANTLRGYCQVARLDPEKSIPHAVLSRAKGLAIITVAKAGALLSYKLGTGLVISRRPDGSWSAPSAILSVGLGWGAQIGGELMDFIIVLHDVKAVKTFCSRMHFSLGAGCSAAAGPIGRVLEADLRAGDKGSGVCYTYSRSKGAFVGVSLEGNLVATRRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRELYARLRP", "length": 485, "header": "tr|Q9LXL1-1|Q9LXL1_ARATH Isoform 1 of RING/FYVE/PHD-type zinc finger family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXL1-1" }, "locus": { "chromosome": "3", "start_pos": 15207367, "end_pos": 15209853, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G43230.1", "url": "https://www.ensemblgenomes.org/id/AT3G43230.1" }, { "database": "Ensembl Peptide", "id": "AT3G43230.1", "url": "https://www.ensemblgenomes.org/id/AT3G43230.1" } ] } 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Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXL1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LXL1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXL1" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9LXL1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXL1" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXL1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G43230", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43230", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LXL1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1" } ], "pmid": "" }, { "name": "autophagosome", "id": "GO:0005776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005776", "evidence": [ { "database": "UniProtKB", "id": "Q9LXL1", "url": "https://www.uniprot.org/uniprotkb/Q9LXL1" } ], "pmid": "" }, { "name": "phagophore assembly site membrane", "id": "GO:0034045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034045", 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"https://www.uniprot.org/uniprotkb/A0A1I9LLD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXM0", "url": "https://www.uniprot.org/uniprotkb/Q9LXM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXM0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXM0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKPVLLVCLLVILIVTSQFEWRQPLVELDTATSSSQKQQQISDREEAVKEKIIISQERHIQRLNELVRSLQLQLLQCKGENETQNATKSYHINKQFIEVERKQILEG", "length": 108, "header": "tr|Q9LXM0-1|Q9LXM0_ARATH Isoform 1 of Peptidyl-prolyl cis-trans isomerase G OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXM0-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLD9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXM0/entry#A0A1I9LLD9-1", "sequence": { "sequence": 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S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXM9", "url": "https://www.uniprot.org/uniprotkb/Q9LXM9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXM9", "url": "https://www.uniprot.org/uniprotkb/Q9LXM9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44580", 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S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP2", "url": "https://www.uniprot.org/uniprotkb/Q9LXP2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP2", "url": "https://www.uniprot.org/uniprotkb/Q9LXP2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44210", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXP4-1", "uniprot_ac": "Q9LXP4", "uniprot_id": "Q9LXP4_ARATH", "mass": { "chemical_mass": 40085.0, "monoisotopic_mass": 40085.0 }, "refseq": { "ac": "NP_190005", "name": "FAD/NAD(P)-binding oxidoreductase family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190005" }, "gene_names": [], "protein_names": [ { "name": "FAD/NAD(P)-binding oxidoreductase family protein", "type": "synonym", "evidence": [ { "id": "NP_190005", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190005" }, { "id": "Q9LXP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative FAD-dependent oxidoreductase.", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ33", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ33#function" }, { "database": "UniProtKB", "id": "ARBA00057036", "url": "https://www.uniprot.org/uniprotkb/ARBA00057036#function" }, { "database": "UniProtKB", "id": "Q9LXP4", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXP4", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4", "locus": {} } ], "crossref": [ { "id": "AT3G44190", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G44190", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823541", "url": "https://www.ncbi.nlm.nih.gov/gene/823541", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR023753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G44190", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44190", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QTEPWIN", "url": "https://omabrowser.org/oma/group/QTEPWIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43735", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43735", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43735:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43735:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07992", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07992", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190005", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190005", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G44190", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G44190", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQ33", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ33-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ33-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXP4", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXP4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKTESVSGKGKRVIVIGGGIAGSLASKFLQFDSDLTLIDPKEYFEIIWASLRSMVEPAFAERSVINHKKYLQNGRVVTSPAVNITDTDVLTADGLVFGYDYLVIATGHNDVLPKTRQEKLSQYQTEHEKIKSSESILIVGGGPSGVELAAEIAVDFPEKKVTIVHNGPRLLEFVGQKAADKALDWMKSKRVEVILNQRVDLSSASDGSKTYRTSGGETIHADCHFLCTGKPLSSEWLKGTVLKDNLDGKGRLMVDEYLRVKGRKNVFAIGDITDVPEMKQGYIAEKHASVATKNIKLLMSGGNEKKMSTYKPGPDIAIISLGRKDSVAQFPFMTVSGCIPGLIKSKDLFVGKTRKARGLDPNLVEP", "length": 367, "header": "tr|Q9LXP4-1|Q9LXP4_ARATH Isoform 1 of FAD/NAD(P)-binding oxidoreductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXP4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQ33-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4/entry#A0A1I9LQ33-1", "sequence": { "sequence": "MVEPAFAERSVINHKKYLQNGRVVTSPAVNITDTDVLTADGLVFGYDYLVIATGHNDVLPKTRQEKLSQYQTEHEKIKSSESILIVGGGPSGVELAAEIAVDFPEKKVTIVHNGPRLLEFVGQKAADKALDWMKSKRVEVILNQRVDLSSASDGSKTYRTSGGETIHADCHFLCTGKPLSSEWLKGTVLKDNLDGKGRLMVDEYLRVKGRKNVFAIGDITDVPEMKQGYIAEKHASVATKNIKLLMSGGNEKKMSTYKPGPDIAIISLGRKDSVAQFPFMTVSGCIPGLIKSKDLFVGKTRKARGLDPNLVEP", "length": 313, "header": "tr|A0A1I9LQ33-1|A0A1I9LQ33_ARATH Computationally mapped isoform of FAD/NAD(P)-binding oxidoreductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXP4-1" }, "locus": { "chromosome": "3", "start_pos": 15901762, "end_pos": 15903608, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44190.2", "url": "https://www.ensemblgenomes.org/id/AT3G44190.2" }, { "database": "Ensembl Peptide", "id": "AT3G44190.2", "url": "https://www.ensemblgenomes.org/id/AT3G44190.2" } ] } }, { "isoform_ac": "Q9LXP4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4/entry#Q9LXP4-1", "sequence": { "sequence": "MEKTESVSGKGKRVIVIGGGIAGSLASKFLQFDSDLTLIDPKEYFEIIWASLRSMVEPAFAERSVINHKKYLQNGRVVTSPAVNITDTDVLTADGLVFGYDYLVIATGHNDVLPKTRQEKLSQYQTEHEKIKSSESILIVGGGPSGVELAAEIAVDFPEKKVTIVHNGPRLLEFVGQKAADKALDWMKSKRVEVILNQRVDLSSASDGSKTYRTSGGETIHADCHFLCTGKPLSSEWLKGTVLKDNLDGKGRLMVDEYLRVKGRKNVFAIGDITDVPEMKQGYIAEKHASVATKNIKLLMSGGNEKKMSTYKPGPDIAIISLGRKDSVAQFPFMTVSGCIPGLIKSKDLFVGKTRKARGLDPNLVEP", "length": 367, "header": "tr|Q9LXP4-1|Q9LXP4_ARATH Isoform 1 of FAD/NAD(P)-binding oxidoreductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXP4-1" }, "locus": { "chromosome": "3", "start_pos": 15901714, "end_pos": 15903628, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44190.1", "url": "https://www.ensemblgenomes.org/id/AT3G44190.1" }, { "database": "Ensembl Peptide", "id": "AT3G44190.1", "url": "https://www.ensemblgenomes.org/id/AT3G44190.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 203, "end_pos": 203, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXP4" } ], "site_lbl": "Ser203" }, { "start_pos": 283, "end_pos": 283, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXP4" } ], "site_lbl": "Tyr283" }, { "start_pos": 8, "end_pos": 8, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXP4" } ], "site_lbl": "Ser8" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP4", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP4", "url": "https://www.uniprot.org/uniprotkb/Q9LXP4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44190", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44190", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54NS8-1", "protein_name": "Apoptosis-inducing factor homolog B", "gene_name": "aifB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTSEKKRVLIIGGGYGGCEVAKQLDSKFNVTVVERKQTFFHSVGSVRAVVEPELVKKIYIPYDKLLKNGKFIFGTVIEISPTLAKLEDGQELTFDYLVIATGSNSLAPFKAPLEKKSSSEILNYFQNFSQQIKQAKSILIVGGGAVACELVSEIVEKYPVKDSELVKKITIVHSGSKLVNPKMNDKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLNQTSPNIQISSQNYTTEKGVPIQADLIIWTVGIKTNSESYQSHFSNVINESGQLKVNLSCQVQGYNNVFAIGDCTDFDEFKTAYNAGYHAAIAAKAIDALSKGKSNDKLAKHKVSGPILSLSLGPQDGITQISPTMCLGSFATKMIKSKSLFIDRYISQLNNPKPLIQ", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190004", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190004", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G44180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G44180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXP5", "url": "https://www.uniprot.org/uniprotkb/Q9LXP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFTVGYVTHWNMVSPSFMYVISNKTIKKLSVTCLNCRYYGTVPRNISFDTPNVVDFNYSDYLRRESPQCHLDSLAKATLDLHFFEDDKRADVTDLISGLHNVKTLHLTSSTVEVISVCCKGGLPVFNNLVDLVFSSKKEGWKVLLPLLIERSPNLKNLVLSCLEVVKVYVAAEMDDTKKMQLTEDLLKFPAASSKLKIQVM", "length": 202, "header": "tr|Q9LXP5-1|Q9LXP5_ARATH Isoform 1 of Syntaxin-related family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXP5-1" }, "isoforms": [ { "isoform_ac": "Q9LXP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXP5/entry#Q9LXP5-1", "sequence": { "sequence": "MTFTVGYVTHWNMVSPSFMYVISNKTIKKLSVTCLNCRYYGTVPRNISFDTPNVVDFNYSDYLRRESPQCHLDSLAKATLDLHFFEDDKRADVTDLISGLHNVKTLHLTSSTVEVISVCCKGGLPVFNNLVDLVFSSKKEGWKVLLPLLIERSPNLKNLVLSCLEVVKVYVAAEMDDTKKMQLTEDLLKFPAASSKLKIQVM", "length": 202, "header": "tr|Q9LXP5-1|Q9LXP5_ARATH Isoform 1 of Syntaxin-related family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXP5-1" }, "locus": { "chromosome": "3", "start_pos": 15900795, "end_pos": 15901716, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44180.1", "url": "https://www.ensemblgenomes.org/id/AT3G44180.1" }, { "database": "Ensembl Peptide", "id": "AT3G44180.1", "url": "https://www.ensemblgenomes.org/id/AT3G44180.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP5", "url": "https://www.uniprot.org/uniprotkb/Q9LXP5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXP5", "url": "https://www.uniprot.org/uniprotkb/Q9LXP5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44180", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 46, "end_pos": 48, "annotation": "n_glycosylation_sequon" }, { "start_pos": 58, "end_pos": 60, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 24, "end_pos": 26 }, { "start_pos": 46, "end_pos": 48 }, { "start_pos": 58, "end_pos": 60 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXP6-1", "uniprot_ac": "Q9LXP6", "uniprot_id": "Q9LXP6_ARATH", "mass": { "chemical_mass": 17990.0, "monoisotopic_mass": 17990.0 }, "refseq": { "ac": "NP_190003", "name": "plant self-incompatibility protein S1 family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190003" }, "gene_names": [], "protein_names": [ { "name": "Plant self-incompatibility protein S1 family protein", "type": "synonym", "evidence": [ { "id": "Q9LXP6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXP6/entry#names_and_taxonomy" } ] }, { "name": "plant self-incompatibility protein S1 family protein", "type": "synonym", "evidence": [ { "id": "NP_190003", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190003" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXP6", "url": "https://www.uniprot.org/uniprotkb/Q9LXP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXP6", "locus": {} } ], "crossref": [ { "id": "AT3G44170", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G44170", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823538", "url": "https://www.ncbi.nlm.nih.gov/gene/823538", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G44170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "THCHLRS", "url": "https://omabrowser.org/oma/group/THCHLRS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_190003", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190003", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G44170", "url": 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"categories": [ "Protein" ] }, { "id": "Q9LXQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTLPELPKDLVEEILCFVPATSLKRLRSSCKEWNRLFKDDKRFARKHIEKAAKQFQPLTLTKNYRICPINVNLHGTTPSLEVKNEVSLVDPHSKNSAAQFNIDRVFHCDGLLLCTSQKDSRFVVWNPLTGVTKWIELGDRYNEGMAFILGYDNKSCNKSYKAMSFNYLDKDSEIYEFSSDSWRVIDDIIKPPHYMDYFRECFSLKGNTYWLGIDRRRRPPDLRITLIKFDFGTERFGYVSLPPPCQVHGFEASNLSVVGDEKLSVLVQGGSTSKTEVWVTSKIGEANVVSWSKVLSLYPKPDVGFWHGLSFLLDEEKKVVLCCKSKGWMEEEDEENVYSVGEDTKFILLNFGVQTIGGYSPIIVNYVPSLGQIELAGSKRKRDY", "length": 384, "header": "sp|Q9LXQ1-1|FBK73_ARATH Isoform 1 of F-box/kelch-repeat protein At3g44120 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LXQ1-1" }, "isoforms": [ { "isoform_ac": "Q9LXQ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ1/entry#Q9LXQ1-1", "sequence": { "sequence": 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"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Whole genome sequence comparisons and 'full-length' cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.", "journal": "Genome Res.", "date": "2004", "authors": "Castelli Vanina, Aury Jean-Marc, Jaillon Olivier, Wincker Patrick, Clepet Christian, Menard Manuella, Cruaud Corinne, Qu\u00e9tier Francis, Scarpelli Claude, Sch\u00e4chter Vincent, Temple Gary, Caboche Michel, Weissenbach Jean, Salanoubat Marcel", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ1" } ], "reference": [ { "type": "PubMed", "id": "14993207", "url": "https://glygen.org/publication/PubMed/14993207" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44120", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44120", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 153, "end_pos": 155, "annotation": "n_glycosylation_sequon" }, { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LXQ1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 384, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LXQ1-F1.pdb", "url_external": 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"Q9LXQ3-1", "uniprot_ac": "Q9LXQ3", "uniprot_id": "FBL51_ARATH", "mass": { "chemical_mass": 51860.0, "monoisotopic_mass": 51860.0 }, "refseq": { "ac": "NP_189995", "name": "F-box family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189995" }, "gene_names": [ { "name": "F26G5.40", "type": "synonym", "evidence": [ { "id": "Q9LXQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ3" } ] } ], "protein_names": [ { "name": "Putative F-box/LRR-repeat protein At3g44090", "type": "recommended", "evidence": [ { "id": "Q9LXQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ3/entry#names_and_taxonomy" } ] }, { "name": "F-box family protein", "type": "synonym", "evidence": [ { "id": "NP_189995", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189995" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ3", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ3", "locus": {} } ], "crossref": [ { "id": "Q9LXQ3", "url": "https://alphafold.ebi.ac.uk/entry/Q9LXQ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G44090", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G44090", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "823527", "url": "https://www.ncbi.nlm.nih.gov/gene/823527", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": 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Classification" ] }, { "id": "ath:AT3G44090", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44090", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXQ3", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXQ3", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_189995", "url": 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"MNNSKSNLLDTEHGDKVAEQMNLASMDCLPDDLLVQILYFLPTKEAISTSLLSKRWRTLYSLVHNLDLDDYIFWHHEDGYNQYFSNDIQKSFEEFMERTLALLGGGHIKTFSLISDEIYRFDHVVDSIRPWLYYNLQKDSLWQFGFPYKVFTSTKLVKLSLGTRLACPRIPQDTSLPVLKVLLLEYIWFEDNQLSDVFLAACPALEDLTIHHMFRPFLISSKNLKKLSVTINFSYYVDRSTILTLDTPNVVDLYYSDFPRPIAPHCHLDSLAKVELDLHSLEDDSRQVQNDADVKNLISEIRNVKTLHLTYSAVELMLSSKKRDWKVLPLLLERSPNLKTLVLSGLNRYTFGRRHRFVGIQIPSSNKIKMLSIKQYQGSATELKHISHLLLKMECLELVKVYLATEMDDLKKMQLTEDVVKLPAASSKIVEKLKAFGAKAVLERVSFLD", "length": 449, "header": "sp|Q9LXQ3-1|FBL51_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g44090 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ3-1" }, "isoforms": [ { "isoform_ac": "Q9LXQ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ3/entry#Q9LXQ3-1", "sequence": { "sequence": "MNNSKSNLLDTEHGDKVAEQMNLASMDCLPDDLLVQILYFLPTKEAISTSLLSKRWRTLYSLVHNLDLDDYIFWHHEDGYNQYFSNDIQKSFEEFMERTLALLGGGHIKTFSLISDEIYRFDHVVDSIRPWLYYNLQKDSLWQFGFPYKVFTSTKLVKLSLGTRLACPRIPQDTSLPVLKVLLLEYIWFEDNQLSDVFLAACPALEDLTIHHMFRPFLISSKNLKKLSVTINFSYYVDRSTILTLDTPNVVDLYYSDFPRPIAPHCHLDSLAKVELDLHSLEDDSRQVQNDADVKNLISEIRNVKTLHLTYSAVELMLSSKKRDWKVLPLLLERSPNLKTLVLSGLNRYTFGRRHRFVGIQIPSSNKIKMLSIKQYQGSATELKHISHLLLKMECLELVKVYLATEMDDLKKMQLTEDVVKLPAASSKIVEKLKAFGAKAVLERVSFLD", "length": 449, "header": "sp|Q9LXQ3-1|FBL51_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g44090 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ3-1" }, "locus": { "chromosome": "3", "start_pos": 15839123, "end_pos": 15840759, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44090.1", "url": "https://www.ensemblgenomes.org/id/AT3G44090.1" }, { "database": "Ensembl Peptide", "id": "AT3G44090.1", "url": "https://www.ensemblgenomes.org/id/AT3G44090.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 387, "end_pos": 387, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXQ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXQ3" } ], "site_lbl": "Ser387" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo 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"name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ5", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5", "locus": {} } ], "crossref": [ { "id": "AT3G44070", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G44070", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823525", "url": "https://www.ncbi.nlm.nih.gov/gene/823525", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G44070", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44070", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NNDIMIP", "url": "https://omabrowser.org/oma/group/NNDIMIP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_189993", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189993", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G44070", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G44070", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LSG0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSG0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSG0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSG0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXQ5", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXQ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNLSRNNDIMIPAPRSGDYRNFLDLLSPYPLFTELIHVPSIIFSDTFNTLKTLKPMSFYHLSGLNRRQTLYGFLNLHGRELHVGENPPVLLRFITRHLRILVFASSNGLSLPNDYLSSSSLEDFKPFTLYTTSIRYGLPKLQSHLTAALPLNLTHRSTVFARALVKALPRVVCLVPPSFTSLTLTPTPLRLLTMTNCSSFDLLLEDLSISFDLTCTNKLPSFWFKALKDLISINPIYPFMFLMLSYLMFSLGYALYCDVLNFGNSFPLHLCIWFPW", "length": 276, "header": "tr|Q9LXQ5-1|Q9LXQ5_ARATH Isoform 1 of Glycosyl hydrolase family 35 protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSG0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5/entry#A0A1I9LSG0-1", "sequence": { "sequence": "MVGSLSSSHEAVSHRKLQPGGGATLTYEDASGLDLVSRLLGSSPYFRSLRPTPLRCFPRLLLQKTSVFGSLPNDYLSSSSLEDFKPFTLYTTSIRYGLPKLQSHLTAALPLNLTHRSTVFARALVKALPRVVCLVPPSFTSLTLTPTPLRLLTMTNCSSFDLLLEDLSISFDLTCTNKLPSFWFKALKDLISINPIYPFMFLMLSYLMFSLGYALYCDVLNFGNSFPLHLCIWFPW", "length": 236, "header": "tr|A0A1I9LSG0-1|A0A1I9LSG0_ARATH Computationally mapped isoform of Glycosyl hydrolase family 35 protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ5-1" }, "locus": { "chromosome": "3", "start_pos": 15828153, "end_pos": 15829823, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44070.2", "url": "https://www.ensemblgenomes.org/id/AT3G44070.2" }, { "database": "Ensembl Peptide", "id": "AT3G44070.2", "url": "https://www.ensemblgenomes.org/id/AT3G44070.2" } ] } }, { "isoform_ac": "Q9LXQ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5/entry#Q9LXQ5-1", "sequence": { "sequence": "MNLSRNNDIMIPAPRSGDYRNFLDLLSPYPLFTELIHVPSIIFSDTFNTLKTLKPMSFYHLSGLNRRQTLYGFLNLHGRELHVGENPPVLLRFITRHLRILVFASSNGLSLPNDYLSSSSLEDFKPFTLYTTSIRYGLPKLQSHLTAALPLNLTHRSTVFARALVKALPRVVCLVPPSFTSLTLTPTPLRLLTMTNCSSFDLLLEDLSISFDLTCTNKLPSFWFKALKDLISINPIYPFMFLMLSYLMFSLGYALYCDVLNFGNSFPLHLCIWFPW", "length": 276, "header": "tr|Q9LXQ5-1|Q9LXQ5_ARATH Isoform 1 of Glycosyl hydrolase family 35 protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ5-1" }, "locus": { "chromosome": "3", "start_pos": 15828164, "end_pos": 15829305, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G44070.1", "url": "https://www.ensemblgenomes.org/id/AT3G44070.1" }, { "database": "Ensembl Peptide", "id": "AT3G44070.1", "url": "https://www.ensemblgenomes.org/id/AT3G44070.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ5", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ5", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44070", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44070", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { 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"Q9LXQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g44060", "type": "recommended", "evidence": [ { "id": "Q9LXQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6/entry#names_and_taxonomy" } ] }, { "name": "F-box/RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_189992", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189992" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ6", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6", "locus": {} } ], "crossref": [ { "id": "Q9LXQ6", "url": "https://alphafold.ebi.ac.uk/entry/Q9LXQ6", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G44060", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G44060", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "823524", "url": "https://www.ncbi.nlm.nih.gov/gene/823524", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G44060", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44060", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MIARRRW", "url": "https://omabrowser.org/oma/group/MIARRRW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXQ6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXQ6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_189992", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189992", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G44060", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G44060", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXQ6", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXQ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDCLPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPEDILKSFNDFVDSSLAFQGGKHIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLMHESWPWLFSIPSKVFNSSTLVKLSLGSRLYCPSFPPDTSLPALKVLLLDSILFRDDQLSNVFLAACPALEDLTIHHTYHPCVISSKSIKKLSLSVNSGYYGAGYILTLDTPSVVDLYYSDSPRHNAPLFHLDSLAKVTLDLHFIENNNREVQNDADVKNLIREICNVKTLHLTCSTVEVISVYCKGGLPMFNNLVELVFSSKKEGWRVLLPLLLENSPNLETLVLSDLHRYTFGRRHRFVGIPIPPNNQIKVLRIMQYQGSATVLKHISHFLLNMDCLEVMKVNVAAALDDPKKMQLTEDLLKLPTASCKLKIQVL", "length": 427, "header": "sp|Q9LXQ6-1|FB193_ARATH Isoform 1 of Putative F-box protein At3g44060 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXQ6-1" }, "isoforms": [ { "isoform_ac": "Q9LXQ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6/entry#Q9LXQ6-1", "sequence": { "sequence": 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Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXQ6", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXQ7-1", "uniprot_ac": "Q9LXQ7", "uniprot_id": "FB209_ARATH", "mass": { "chemical_mass": 48055.0, "monoisotopic_mass": 48055.0 }, "refseq": { "ac": "NP_191454", "name": "F-box/RNI-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191454" }, "gene_names": [ { "name": "T20N10.300", "type": "synonym", "evidence": [ { "id": "Q9LXQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ7" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g58950", "type": "recommended", "evidence": [ { "id": "Q9LXQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXQ7/entry#names_and_taxonomy" } ] }, { "name": "F-box/RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191454", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191454" } ] } ], "function": [], "disease": [], 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXR0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXR0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191451", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191451", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXR0", "url": "https://www.uniprot.org/uniprotkb/Q9LXR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXR0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDDSVKNQGSLMDFVNGVLALPVTTRISKFSLRFDSFLKRKLETGLVIGPHVVNRCLCNVLKRGVLDLKLEIYGEDGYLLPSEVFTCKTIVDLKLTSCIFAESYVIDVIPENAFLPGLESLFLKSIWFSDLRGCAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRTEFTYFNGSDFKSITFDTPSLTYLKYIDFVPEEYPVVNLDSIVEAKLHLILTGNQDYPVRYLGREDDPITSNPTNLIKGLRNVEILHLSTATAQMLCFFPRETLPEFVNLHHLTIGPTYYECFNWRLLPILLKKTPNLKTLMIKGPLHLYYRDFNDDEEEEEPEYYCECSSGCNCLLSCHMEVLEISHYRGTTKELEKLKHFLGKLSCLEHVKLGVWASSDKEKLSITTDLLMLPRASVNCKIQINFS", "length": 470, "header": "sp|Q9LXR0-1|FBL58_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g58920 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR0-1" }, "isoforms": [ { "isoform_ac": "Q9LXR0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR0/entry#Q9LXR0-1", "sequence": { "sequence": "MDRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDDSVKNQGSLMDFVNGVLALPVTTRISKFSLRFDSFLKRKLETGLVIGPHVVNRCLCNVLKRGVLDLKLEIYGEDGYLLPSEVFTCKTIVDLKLTSCIFAESYVIDVIPENAFLPGLESLFLKSIWFSDLRGCAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRTEFTYFNGSDFKSITFDTPSLTYLKYIDFVPEEYPVVNLDSIVEAKLHLILTGNQDYPVRYLGREDDPITSNPTNLIKGLRNVEILHLSTATAQMLCFFPRETLPEFVNLHHLTIGPTYYECFNWRLLPILLKKTPNLKTLMIKGPLHLYYRDFNDDEEEEEPEYYCECSSGCNCLLSCHMEVLEISHYRGTTKELEKLKHFLGKLSCLEHVKLGVWASSDKEKLSITTDLLMLPRASVNCKIQINFS", "length": 470, "header": "sp|Q9LXR0-1|FBL58_ARATH Isoform 1 of Putative F-box/LRR-repeat protein At3g58920 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR0-1" }, "locus": { "chromosome": "3", "start_pos": 21776293, "end_pos": 21777988, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58920.1", "url": "https://www.ensemblgenomes.org/id/AT3G58920.1" }, { "database": "Ensembl Peptide", "id": "AT3G58920.1", "url": "https://www.ensemblgenomes.org/id/AT3G58920.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 81, "end_pos": 81, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXR0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXR0" } ], "site_lbl": "Ser81" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR0", "url": "https://www.uniprot.org/uniprotkb/Q9LXR0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR0", "url": "https://www.uniprot.org/uniprotkb/Q9LXR0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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"Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXR1", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXR1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191450", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191450", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXR1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXR1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRVSSLPDELLCHILSFLTTKETALTSLLSKREIIPLIKSVVFPTLIYASFLVQLVSKLVKLKIGSGIDLCWWTESIFLPMLKTLVLDSVEFCVARFEILFPACPALEELEMANIKVLDSDATVSSASLKTLKIDSSVGSGSFSFDTPNLVYLGYSDFVAEDYPLANFQNLFEARINLVVTKDQIERARAPNNGWLEDDEDDIALRLGIRKSS", "length": 214, "header": "sp|Q9LXR1-1|FB208_ARATH Isoform 1 of Putative F-box protein At3g58910 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR1-1" }, "isoforms": [ { "isoform_ac": "Q9LXR1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1/entry#Q9LXR1-1", "sequence": { "sequence": "MDRVSSLPDELLCHILSFLTTKETALTSLLSKREIIPLIKSVVFPTLIYASFLVQLVSKLVKLKIGSGIDLCWWTESIFLPMLKTLVLDSVEFCVARFEILFPACPALEELEMANIKVLDSDATVSSASLKTLKIDSSVGSGSFSFDTPNLVYLGYSDFVAEDYPLANFQNLFEARINLVVTKDQIERARAPNNGWLEDDEDDIALRLGIRKSS", "length": 214, "header": "sp|Q9LXR1-1|FB208_ARATH Isoform 1 of Putative F-box protein At3g58910 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR1-1" }, "locus": { "chromosome": "3", "start_pos": 21775306, "end_pos": 21776079, "strand": "+", "evidence": 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S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G58910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LXR1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 214, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LXR1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LXR1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LXR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXR1" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 47, "start_aa": "Met", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXR3-1", "uniprot_ac": "Q9LXR3", "uniprot_id": "Q9LXR3_ARATH", "mass": { "chemical_mass": 33137.0, "monoisotopic_mass": 33137.0 }, "refseq": { "ac": "NP_191448", "name": "RNI-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191448" }, "gene_names": [], "protein_names": [ { "name": "RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191448", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191448" }, { "id": "Q9LXR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXR3", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3", "locus": {} } ], "crossref": [ { "id": "AT3G58890", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G58890", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825058", "url": "https://www.ncbi.nlm.nih.gov/gene/825058", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58890", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58890", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RETTMIS", "url": "https://omabrowser.org/oma/group/RETTMIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_191448", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191448", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58890", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58890", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXR3", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXR3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQTLFLVPAQQLVLQLASGGTFLPMLKTLIIKAKWIGSEWDETVSSASLRKLVIYCQGGCADLLNSKSISFDTPSLLYLVYSVFVAEDYPKVNLTNLVEAKFNLMLLDEQIEQIREPNDEDDVFLRLGNVLKLFAGIRNVQKLYLSANILEVLSLCCESFPVFNNLKILRIRSAEDRGWQAMPVLLRNCPHLETLVLEGLIHYVTGECGNACDCKSREGIVSSLLSCPVKKVQIKGFKGTMRESSMIWHFMTSFPCLKFLVYTPMDKKWIFGVAFSNVRVFIIDIVMIIIFLS", "length": 293, "header": "tr|Q9LXR3-1|Q9LXR3_ARATH Isoform 1 of RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXR3-1" }, "isoforms": [ { "isoform_ac": "Q9LXR3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3/entry#Q9LXR3-1", "sequence": { "sequence": "MQTLFLVPAQQLVLQLASGGTFLPMLKTLIIKAKWIGSEWDETVSSASLRKLVIYCQGGCADLLNSKSISFDTPSLLYLVYSVFVAEDYPKVNLTNLVEAKFNLMLLDEQIEQIREPNDEDDVFLRLGNVLKLFAGIRNVQKLYLSANILEVLSLCCESFPVFNNLKILRIRSAEDRGWQAMPVLLRNCPHLETLVLEGLIHYVTGECGNACDCKSREGIVSSLLSCPVKKVQIKGFKGTMRESSMIWHFMTSFPCLKFLVYTPMDKKWIFGVAFSNVRVFIIDIVMIIIFLS", "length": 293, "header": "tr|Q9LXR3-1|Q9LXR3_ARATH Isoform 1 of RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXR3-1" }, "locus": { "chromosome": "3", "start_pos": 21771046, "end_pos": 21772577, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58890.1", "url": "https://www.ensemblgenomes.org/id/AT3G58890.1" }, { "database": "Ensembl Peptide", "id": "AT3G58890.1", "url": "https://www.ensemblgenomes.org/id/AT3G58890.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR3", "url": "https://www.uniprot.org/uniprotkb/Q9LXR3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar 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"https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58860", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58860", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IKSVMIQ", "url": "https://omabrowser.org/oma/group/IKSVMIQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXR6", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXR6", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191445", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58860", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58860", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXR6", "url": "https://www.uniprot.org/uniprotkb/Q9LXR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXR6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKDGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLALFMDFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQFQTLLPACPVLEELMLLNMEWKDRNVILSSSSLKNLKITSEDGCLGTLSFDTPNLVFLDYYDYVAEDYPIVNLKNLVEVGINLVLTADRINRARDNVWNLIHGIQNAEIFHISPVTFEVLSLSCEAMPVFKNLTTLNIRTVMQQGWQAMPLLLKNCPNLETLYLGGLLHTVTNKCGDVCDCIPRKKKGRSLMACPVNKIQIQGFRGTIREVHMIKHFLDFCPSLKEMEIIVETKEPTLFEIPKWLEIVEDTLMQYNEMSSCTINYRVLAPLYWRWTRK", "length": 457, "header": "sp|Q9LXR6-1|FB207_ARATH Isoform 1 of Putative F-box protein At3g58860 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR6-1" }, "isoforms": [ { "isoform_ac": "Q9LXR6-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXR6/entry#Q9LXR6-1", "sequence": { "sequence": "MDSEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKDGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLALFMDFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQFQTLLPACPVLEELMLLNMEWKDRNVILSSSSLKNLKITSEDGCLGTLSFDTPNLVFLDYYDYVAEDYPIVNLKNLVEVGINLVLTADRINRARDNVWNLIHGIQNAEIFHISPVTFEVLSLSCEAMPVFKNLTTLNIRTVMQQGWQAMPLLLKNCPNLETLYLGGLLHTVTNKCGDVCDCIPRKKKGRSLMACPVNKIQIQGFRGTIREVHMIKHFLDFCPSLKEMEIIVETKEPTLFEIPKWLEIVEDTLMQYNEMSSCTINYRVLAPLYWRWTRK", "length": 457, "header": "sp|Q9LXR6-1|FB207_ARATH Isoform 1 of Putative F-box protein At3g58860 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXR6-1" }, "locus": { "chromosome": "3", "start_pos": 21763720, "end_pos": 21765306, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58860.1", "url": "https://www.ensemblgenomes.org/id/AT3G58860.1" }, { "database": "Ensembl Peptide", "id": "AT3G58860.1", "url": "https://www.ensemblgenomes.org/id/AT3G58860.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR6", "url": "https://www.uniprot.org/uniprotkb/Q9LXR6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXR6", "url": "https://www.uniprot.org/uniprotkb/Q9LXR6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G58860", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58860", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 311, "end_pos": 313, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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[], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 311, "end_pos": 313 }, { "start_pos": 52, "end_pos": 54 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LXS0-1", "uniprot_ac": "Q9LXS0", "uniprot_id": "FB206_ARATH", "mass": { "chemical_mass": 47335.0, "monoisotopic_mass": 47335.0 }, "refseq": { "ac": "NP_191441", "name": "F-box/RNI-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191441" }, "gene_names": [ { "name": "T20N10.170", "type": "synonym", "evidence": [ { "id": "Q9LXS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g58820", "type": "recommended", "evidence": [ { "id": "Q9LXS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0/entry#names_and_taxonomy" } ] }, { "name": "F-box/RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191441", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191441" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LXS0", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0", "locus": {} } ], "crossref": [ { "id": "Q9LXS0", "url": "https://alphafold.ebi.ac.uk/entry/Q9LXS0", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G58820", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G58820", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825051", "url": "https://www.ncbi.nlm.nih.gov/gene/825051", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58820", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58820", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEEMAII", "url": "https://omabrowser.org/oma/group/MEEMAII/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LXS0", "url": "https://www.orthodb.org/?gene=Q9LXS0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LXS0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LXS0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191441", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191441", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58820", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58820", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LXS0", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXS0-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/Q9LXS4/entry#Q9LXS4-1", "sequence": { "sequence": "MEVDYGGFSIREYTEKVRSDNERKCWPFAGDLIQSFLPPITVSKFRWWSHELASLLTKSPVSVDDSDPSFRRKAKAKTRQCKKRSIVEICATAPKIQLAEDYVVHKKKIKTTKSKDSGDREFTNKVNQCKEQKVDDIGKCSLGIKESSGVMSLSSKKAGLVSKDHDSEFQIPAIFKAKRKVCFARSPDKSKTHVRFSDQSGNLSQLEKSTVSLQLCCLEMNRLSLSENLSQRKNQSSVNDKQLKVMSTDQTSTVMHLETRQQYKFQPAVSKSHLSCFLGPHLSSQERVTDALDLERKEYVAQAIQSFISTSSETPYRACPSFSQPVSADMHRGTLLYQSPFDPLPTEWMQKSVLNRQRHVGEAILGFPLDLQGDLVDANGETCRSFDRSGLCTSFSKSASTGNDLLLGNLVEFSSEKKHLIEAALAKDNAPLNEKRHKYFPARLGLDETFTEKAYLTNTNDGECGYTPVSEVNPRSHAINMSKRNGVKQNLNSGKVILKRDDLCLQNTQATMRLMGKDVSVSTSYSGMIRTGERIIGPDASIDYSSLGTYTHQSWVCQRTTLEVSENHSTTILDKNWNKALLRDTSKDPFPLFCEPLVSLASQSRAYAVPDSEFPSTILNPCCSLASFPLSEKNLNFHGSGLGPPNSFTLSQQQLPFPYDYNNVDIGLLPDARKRSFGLPLSSTNSARRSQTPWAQSSSENSCSELSFVNPSEQLTSFYGSRLSSSINVGTTNKRVAPVEEYPMKNHKVPKLLPMQGGLNYVKEFLCRPAN", "length": 771, "header": "tr|Q9LXS4-1|Q9LXS4_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXS4-1" }, "locus": { "chromosome": "3", "start_pos": 21732122, "end_pos": 21735327, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58770.1", "url": "https://www.ensemblgenomes.org/id/AT3G58770.1" }, { "database": "Ensembl Peptide", "id": "AT3G58770.1", "url": "https://www.ensemblgenomes.org/id/AT3G58770.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 66, "end_pos": 66, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXS4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXS4" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser66" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXS4", "url": "https://www.uniprot.org/uniprotkb/Q9LXS4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, 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OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXU4-1" }, "isoforms": [ { "isoform_ac": "Q9LXU4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXU4/entry#Q9LXU4-1", "sequence": { "sequence": "MKSGLIITIALLLYTSSFVLVSVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHYHLTPADDSAWSSLLPRKMLKEEADEFAWTMLYRKFKDSNSSGNFLKDVSLHDVRLDPDSFHWRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYLSATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYYTIHKILAGLVDQYKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMNDVLYQLYSITGDSKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEITGDLLHKEISMFFMDIFNASHSYATGGTSVSEFWQDPKRMATALQTENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTPYDSFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSWDPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPYLLAGHTSRDWSITTQAKPGKWITPIPETQNSYLVTLSQQSGNVSYVFSNSNQTITMRVSPEPGTQDAVAATFRLVTDNSKPRISGPEGLIGRLVMLEPFDFPGMIVKQATDSSLTVQASSPSDKGASSFRLVSGLDGKLGSVSLRLESKKGCFVYSDQTLKQGTKLRLECGSDATDEKFKEAASFSLKTGMHQYNPMSFVMSGTQRNFVLSPLFSLRDETYNVYFSVQT", "length": 861, "header": "tr|Q9LXU4-1|Q9LXU4_ARATH Isoform 1 of Proline-tRNA ligase (DUF1680) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXU4-1" }, "locus": { "chromosome": "5", "start_pos": 4092519, "end_pos": 4097059, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G12950.1", "url": "https://www.ensemblgenomes.org/id/AT5G12950.1" }, { "database": "Ensembl Peptide", "id": "AT5G12950.1", "url": "https://www.ensemblgenomes.org/id/AT5G12950.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 503, "start_aa": "Thr", "end_pos": 503, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr503", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXU4", "url": "https://www.uniprot.org/uniprotkb/Q9LXU4" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar 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S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXV9", "url": "https://www.uniprot.org/uniprotkb/Q9LXV9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXV9", "url": "https://www.uniprot.org/uniprotkb/Q9LXV9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G44020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G44020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9LXV9", "url": "https://www.uniprot.org/uniprotkb/Q9LXV9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": 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"MVLGGSTFTTAYVSVTSRGDGKLIELFAVVVQGVTGIGDKLSWQGIPNGEFSLVSHQVIMTNVERFRRHIRESEICQVCKAASETIIHLLRDCPDGWYLEERVRLAYIVQYGGLVELEVGVSWKLGTGHCLGVIRWGGIMAGRVHAEHRYMLNSDGRTMGALSQEIGKSGLFTYIEKLTRQSEGFIVNLLTDGLANYAFFYS", "length": 202, "header": "tr|Q9LXW5-1|Q9LXW5_ARATH Isoform 1 of Reverse transcriptase zinc-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXW5-1" }, "isoforms": [ { "isoform_ac": "Q9LXW5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXW5/entry#Q9LXW5-1", "sequence": { "sequence": "MVLGGSTFTTAYVSVTSRGDGKLIELFAVVVQGVTGIGDKLSWQGIPNGEFSLVSHQVIMTNVERFRRHIRESEICQVCKAASETIIHLLRDCPDGWYLEERVRLAYIVQYGGLVELEVGVSWKLGTGHCLGVIRWGGIMAGRVHAEHRYMLNSDGRTMGALSQEIGKSGLFTYIEKLTRQSEGFIVNLLTDGLANYAFFYS", "length": 202, "header": "tr|Q9LXW5-1|Q9LXW5_ARATH Isoform 1 of Reverse transcriptase zinc-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LXW5-1" }, "locus": { "chromosome": "3", "start_pos": 15764265, "end_pos": 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"11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer.", "journal": "Proteomics", "date": "2009-03", "authors": "Li Hao, Wong Wai Shing, Zhu Lin, Guo Hong Wei, Ecker Joseph, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9LXW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXW5" } ], "reference": [ { "type": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXW5", "url": "https://www.uniprot.org/uniprotkb/Q9LXW5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G43940", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43940", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 150, 154 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LXX3", "url": "https://www.uniprot.org/uniprotkb/Q9LXX3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants.", "journal": "Plant Physiol.", "date": "2005", "authors": "Xiao Yong-Li, Smith Shannon R, Ishmael Nadeeza, Redman Julia C, Kumar Nihkil, Monaghan Erin L, Ayele Mulu, Haas Brian J, Wu Hank C, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LXX3", "url": "https://www.uniprot.org/uniprotkb/Q9LXX3" } ], "reference": [ { "type": "PubMed", "id": "16244158", "url": 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"https://www.uniprot.org/uniprotkb/Q9LXZ9", "locus": {} } ], "crossref": [ { "id": "AT3G56410", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G56410", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824808", "url": "https://www.ncbi.nlm.nih.gov/gene/824808", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021480", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021480", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055126", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055126", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G56410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G56410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EYELGTM", "url": "https://omabrowser.org/oma/group/EYELGTM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LLR2", "url": "https://www.orthodb.org/?gene=A0A1I9LLR2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4IZF5", "url": "https://www.orthodb.org/?gene=F4IZF5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LXZ9", "url": "https://www.orthodb.org/?gene=Q9LXZ9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31105", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31105", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31105:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31105:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31105:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31105:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11331", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11331", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22910", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22910", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191200", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191200", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G56410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G56410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLR2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLR2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLR2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IZF5", "url": "https://www.uniprot.org/uniprotkb/F4IZF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IZF5-1", "url": "https://www.uniprot.org/uniprotkb/F4IZF5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXZ9", "url": "https://www.uniprot.org/uniprotkb/Q9LXZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LXZ9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMKKKKQSRSQSSSTKKTFEPSSDSSPSPRLLSIIRSKLASSKDLKHMFRGMRSRTVPGLSSQSRIVRCPKCHKLLQEPLDATSYKCGGCDSILHAKRWEPDGNDHTNTIPEALLSSQNRSLSAEVESPEDGSRTPMRTTHREYNSRPSTSVERGYHPETVYKPETSDIRREWMRRTDDFSETGDSDVFTSERSSPYNTRSNAAQWAQHEGRYADPPRVPFYPASPSPSSAYEYGYSSPFHGSYVSASEQSYYHQQPNQFEQYSREGWFQESSVASPTRFPGETSDGKYYHRSSQSQLHDLQYHNLYEPSRSETPHHSVYSERSYVPAAAPHRSTYSEHSVGISKSDTSSEKSILRNKKRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLKFSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLDDDSGETICKSNDAVILSQKILETFEDKGIKEDIRNISTKFLDLKLEALQPHLKPMGNRRLSEQQPTSSETIGETSKIHLEQSQEAHSEKSTEMDNNICDIEEPEYEKNEIIKPEEIVGEGSGESLEVPVNQNERMSESSEEDERVAERSVSHSEELLYKKEYVSETRVQSENTGDTYEFEWEETQETEEYEGESTLEEIGDKPQLHLDKSRYTRDSICDSSLSYGEPFEDTSVKEDTEHISNTISDAKSATTHSPLNSLVNENQRFIGHLDQSGEATVTISRIQEHSKYEYENLSERQELEMTISDRVTCKLEESRYETNETLEPSKVGEDGSLVSFEKVSEAFETIIEGKTGEERLVSHQMDSPNENVENSYGTLEPVYLEESGFAGERTWEGTIEDRAGLHLEEYESNYENYSRPFEWTSETAPTFRMHDYELGTILEPDEYADGRSESSSRGSFNDDGGSEERVVFHESQVAIPEQSHYEYENSSKRQELSDTVFDIARSELQEYRYERNETLEPSKMVGDGSVVPVEKAGETFISKKNEDSSVSHQMESQNEDMENSYGTKEPVYPEGSRCESENSWAETMGDGAGLKLEEYNSNPFEWTSEKAAAFHLHEYERWTVPEPEEDANERSITSSRDSFNDHENLKGIAVSHEEEPWLVDENRTEALKVGVMVEDEPSLHLTKFENETMKLEETLEWTSERAPTFRLPEYELGEMLESDNDVDERSEYSSKGSFNDHEIPRELLNEEDPQLVIDGRTEAVQVGEMAKDTVSLHLEECGNESMKLDETFEWTSGRTLTFRRHGYEVETKLEADEDADGRSESSSRGSFNDRGSSKERAVLHEDGSWLVDDYETKALKVGVMAEDGSSLQLEKGENGKMDLDETLEPRDDIFRLSLDDTLEQERMTFHLKMSQDKQESLRQTFKQGDAEKDSDVFSEGHEFPSKMAELDSDTEEEIVEEQLEHLQKENEKLSLTFEQHDHIYSTTEPSEIVGLRHALYQTQNSPLRSPLTSPIHTPIGSPLHYLMASQIRSPIASTMHSHIVSPLRSPINSSGSLSDVLFFSKKT", "length": 1535, "header": "tr|Q9LXZ9-1|Q9LXZ9_ARATH Isoform 1 of Zinc-ribbon domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXZ9-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLR2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXZ9/entry#A0A1I9LLR2-1", "sequence": { "sequence": "MRTTHREYNSRPSTSVERGYHPETVYKPETSDIRREWMRRTDDFSETGDSDVFTSERSSPYNTRSNAAQWAQHEGRYADPPRVPFYPASPSPSSAYEYGYSSPFHGSYVSASEQSYYHQQPNQFEQYSREGWFQESSVASPTRFPGETSDGKYYHRSSQSQLHDLQYHNLYEPSRSETPHHSVYSERSYVPAAAPHRSTYSEHSVGISKSDTSSEKSILRNKKRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLKFSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLDDDSGETICKSNDAVILSQKILETFEDKGIKEDIRNISTKFLDLKLEALQPHLKPMGNRRLSEQQPTSSETIGETSKIHLEQSQEAHSEKSTEMDNNICDIEEPEYEKNEIIKPEEIVGEGSGESLEVPVNQNERMSESSEEDERVAERSVSHSEELLYKKEYVSETRVQSENTGDTYEFEWEETQETEEYEGESTLEEIGDKPQLHLDKSRYTRDSICDSSLSYGEPFEDTSVKEDTEHISNTISDAKSATTHSPLNSLVNENQRFIGHLDQSGEATVTISRIQEHSKYEYENLSERQELEMTISDRVTCKLEESRYETNETLEPSKVGEDGSLVSFEKVSEAFETIIEGKTGEERLVSHQMDSPNENVENSYGTLEPVYLEESGFAGERTWEGTIEDRAGLHLEEYESNYENYSRPFEWTSETAPTFRMHDYELGTILEPDEYADGRSESSSRGSFNDDGGSEERVVFHESQVAIPEQSHYEYENSSKRQELSDTVFDIARSELQEYRYERNETLEPSKMVGDGSVVPVEKAGETFISKKNEDSSVSHQMESQNEDMENSYGTKEPVYPEGSRCESENSWAETMGDGAGLKLEEYNSNPFEWTSEKAAAFHLHEYERWTVPEPEEDANERSITSSRDSFNDHENLKGIAVSHEEEPWLVDENRTEALKVGVMVEDEPSLHLTKFENETMKLEETLEWTSERAPTFRLPEYELGEMLESDNDVDERSEYSSKGSFNDHEIPRELLNEEDPQLVIDGRTEAVQVGEMAKDTVSLHLEECGNESMKLDETFEWTSGRTLTFRRHGYEVETKLEADEDADGRSESSSRGSFNDRGSSKERAVLHEDGSWLVDDYETKALKVGVMAEDGSSLQLEKGENGKMDLDETLEPRDDIFRLSLDDTLEQERMTFHLKMSQDKQESLRQTFKQGDAEKDSDVFSEGHEFPSKMAELDSDTEEEIVEEQLEHLQKENEKLSLTFEQHDHIYSTTEPSEIVGLRHALYQTQNSPLRSPLTSPIHTPIGSPLHYLMASQIRSPIASTMHSHIVSPLRSPINSSGSLSDVLFFSKKT", "length": 1399, "header": "tr|A0A1I9LLR2-1|A0A1I9LLR2_ARATH Computationally mapped isoform of Probable zinc-ribbon domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXZ9-1" }, "locus": { "chromosome": "3", "start_pos": 20916320, "end_pos": 20920519, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56410.3", "url": "https://www.ensemblgenomes.org/id/AT3G56410.3" }, { "database": "Ensembl Peptide", "id": "AT3G56410.3", "url": "https://www.ensemblgenomes.org/id/AT3G56410.3" } ] } }, { "isoform_ac": "F4IZF5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXZ9/entry#F4IZF5-1", "sequence": { "sequence": "MFRGMRSRTVPGLSSQSRIVRCPKCHKLLQEPLDATSYKCGGCDSILHAKRWEPDGNDHTNTIPEALLSSQNRSLSAEVESPEDGSRTPMRTTHREYNSRPSTSVERGYHPETVYKPETSDIRREWMRRTDDFSETGDSDVFTSERSSPYNTRSNAAQWAQHEGRYADPPRVPFYPASPSPSSAYEYGYSSPFHGSYVSASEQSYYHQQPNQFEQYSREGWFQESSVASPTRFPGETSDGKYYHRSSQSQLHDLQYHNLYEPSRSETPHHSVYSERSYVPAAAPHRSTYSEHSVGISKSDTSSEKSILRNKKRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLKFSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLDDDSGETICKSNDAVILSQKILETFEDKGIKEDIRNISTKFLDLKLEALQPHLKPMGNRRLSEQQPTSSETIGETSKIHLEQSQEAHSEKSTEMDNNICDIEEPEYEKNEIIKPEEIVGEGSGESLEVPVNQNERMSESSEEDERVAERSVSHSEELLYKKEYVSETRVQSENTGDTYEFEWEETQETEEYEGESTLEEIGDKPQLHLDKSRYTRDSICDSSLSYGEPFEDTSVKEDTEHISNTISDAKSATTHSPLNSLVNENQRFIGHLDQSGEATVTISRIQEHSKYEYENLSERQELEMTISDRVTCKLEESRYETNETLEPSKVGEDGSLVSFEKVSEAFETIIEGKTGEERLVSHQMDSPNENVENSYGTLEPVYLEESGFAGERTWEGTIEDRAGLHLEEYESNYENYSRPFEWTSETAPTFRMHDYELGTILEPDEYADGRSESSSRGSFNDDGGSEERVVFHESQVAIPEQSHYEYENSSKRQELSDTVFDIARSELQEYRYERNETLEPSKMVGDGSVVPVEKAGETFISKKNEDSSVSHQMESQNEDMENSYGTKEPVYPEGSRCESENSWAETMGDGAGLKLEEYNSNPFEWTSEKAAAFHLHEYERWTVPEPEEDANERSITSSRDSFNDHENLKGIAVSHEEEPWLVDENRTEALKVGVMVEDEPSLHLTKFENETMKLEETLEWTSERAPTFRLPEYELGEMLESDNDVDERSEYSSKGSFNDHEIPRELLNEEDPQLVIDGRTEAVQVGEMAKDTVSLHLEECGNESMKLDETFEWTSGRTLTFRRHGYEVETKLEADEDADGRSESSSRGSFNDRGSSKERAVLHEDGSWLVDDYETKALKVGVMAEDGSSLQLEKGENGKMDLDETLEPRDDIFRLSLDDTLEQERMTFHLKMSQDKQESLRQTFKQGDAEKDSDVFSEGHEFPSKMAELDSDTEEEIVEEQLEHLQKENEKLSLTFEQHDHIYSTTEPSEIVGLRHALYQTQNSPLRSPLTSPIHTPIGSPLHYLMASQIRSPIASTMHSHIVSPLRSPINSSGSLSDVLFFSKKT", "length": 1488, "header": "tr|F4IZF5-1|F4IZF5_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXZ9-1" }, "locus": { "chromosome": "3", "start_pos": 20916172, "end_pos": 20921338, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56410.1", "url": "https://www.ensemblgenomes.org/id/AT3G56410.1" }, { "database": "Ensembl Peptide", "id": "AT3G56410.1", "url": "https://www.ensemblgenomes.org/id/AT3G56410.1" } ] } }, { "isoform_ac": "Q9LXZ9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LXZ9/entry#Q9LXZ9-1", "sequence": { "sequence": "MMKKKKQSRSQSSSTKKTFEPSSDSSPSPRLLSIIRSKLASSKDLKHMFRGMRSRTVPGLSSQSRIVRCPKCHKLLQEPLDATSYKCGGCDSILHAKRWEPDGNDHTNTIPEALLSSQNRSLSAEVESPEDGSRTPMRTTHREYNSRPSTSVERGYHPETVYKPETSDIRREWMRRTDDFSETGDSDVFTSERSSPYNTRSNAAQWAQHEGRYADPPRVPFYPASPSPSSAYEYGYSSPFHGSYVSASEQSYYHQQPNQFEQYSREGWFQESSVASPTRFPGETSDGKYYHRSSQSQLHDLQYHNLYEPSRSETPHHSVYSERSYVPAAAPHRSTYSEHSVGISKSDTSSEKSILRNKKRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQGKRQRYQVRCGSCSGVLKFSIREKADTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSHLTCLDDDSGETICKSNDAVILSQKILETFEDKGIKEDIRNISTKFLDLKLEALQPHLKPMGNRRLSEQQPTSSETIGETSKIHLEQSQEAHSEKSTEMDNNICDIEEPEYEKNEIIKPEEIVGEGSGESLEVPVNQNERMSESSEEDERVAERSVSHSEELLYKKEYVSETRVQSENTGDTYEFEWEETQETEEYEGESTLEEIGDKPQLHLDKSRYTRDSICDSSLSYGEPFEDTSVKEDTEHISNTISDAKSATTHSPLNSLVNENQRFIGHLDQSGEATVTISRIQEHSKYEYENLSERQELEMTISDRVTCKLEESRYETNETLEPSKVGEDGSLVSFEKVSEAFETIIEGKTGEERLVSHQMDSPNENVENSYGTLEPVYLEESGFAGERTWEGTIEDRAGLHLEEYESNYENYSRPFEWTSETAPTFRMHDYELGTILEPDEYADGRSESSSRGSFNDDGGSEERVVFHESQVAIPEQSHYEYENSSKRQELSDTVFDIARSELQEYRYERNETLEPSKMVGDGSVVPVEKAGETFISKKNEDSSVSHQMESQNEDMENSYGTKEPVYPEGSRCESENSWAETMGDGAGLKLEEYNSNPFEWTSEKAAAFHLHEYERWTVPEPEEDANERSITSSRDSFNDHENLKGIAVSHEEEPWLVDENRTEALKVGVMVEDEPSLHLTKFENETMKLEETLEWTSERAPTFRLPEYELGEMLESDNDVDERSEYSSKGSFNDHEIPRELLNEEDPQLVIDGRTEAVQVGEMAKDTVSLHLEECGNESMKLDETFEWTSGRTLTFRRHGYEVETKLEADEDADGRSESSSRGSFNDRGSSKERAVLHEDGSWLVDDYETKALKVGVMAEDGSSLQLEKGENGKMDLDETLEPRDDIFRLSLDDTLEQERMTFHLKMSQDKQESLRQTFKQGDAEKDSDVFSEGHEFPSKMAELDSDTEEEIVEEQLEHLQKENEKLSLTFEQHDHIYSTTEPSEIVGLRHALYQTQNSPLRSPLTSPIHTPIGSPLHYLMASQIRSPIASTMHSHIVSPLRSPINSSGSLSDVLFFSKKT", "length": 1535, "header": "tr|Q9LXZ9-1|Q9LXZ9_ARATH Isoform 1 of Zinc-ribbon domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LXZ9-1" }, "locus": { "chromosome": "3", "start_pos": 20916172, "end_pos": 20921206, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56410.2", "url": "https://www.ensemblgenomes.org/id/AT3G56410.2" }, { "database": "Ensembl Peptide", "id": "AT3G56410.2", "url": "https://www.ensemblgenomes.org/id/AT3G56410.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 1190, "end_pos": 1190, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser1190" }, { "start_pos": 1205, "end_pos": 1205, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser1205" }, { "start_pos": 128, "end_pos": 128, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser128" }, { "start_pos": 133, "end_pos": 133, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser133" }, { "start_pos": 1392, "end_pos": 1392, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" } ], "site_lbl": "Thr1392" }, { "start_pos": 1406, "end_pos": 1406, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "F4IZF5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IZF5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser1406" }, { "start_pos": 140, "end_pos": 140, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LXZ9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Thr140" }, { "start_pos": 1420, "end_pos": 1420, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LXZ9", "url": 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"MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDLVSDGDDA", "length": 121, "header": "sp|Q9LY56-1|YIPL4_ARATH Isoform 1 of Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LY56-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LL83-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY56/entry#A0A1I9LL83-1", "sequence": { "sequence": "MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLEL", "length": 102, "header": "tr|A0A1I9LL83-1|A0A1I9LL83_ARATH Computationally mapped isoform of Protein yippee-like OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LY56-1" }, "locus": { "chromosome": "3", "start_pos": 20740610, "end_pos": 20742441, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G55890.2", "url": "https://www.ensemblgenomes.org/id/AT3G55890.2" }, { "database": "Ensembl Peptide", "id": "AT3G55890.2", "url": 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Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LY56", "url": "https://www.uniprot.org/uniprotkb/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9LY56", "url": "https://www.uniprot.org/uniprotkb/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Characterization of the phosphoproteome of mature Arabidopsis pollen.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-10", "authors": "Mayank Pururawa, Grossman Jonas, Wuest Samuel, Boisson-Dernier Aur\u00e9lien, Roschitzki Bernd, Nanni Paolo, N\u00fchse Thomas, Grossniklaus Ueli", "evidence": [ { "database": "iPTMnet", "id": "Q9LY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9LY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LY56", "url": "https://www.uniprot.org/uniprotkb/Q9LY56" } ], "reference": [ { "type": "PubMed", "id": 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"MAKEKDLEKQIGGCMAGFFNIFDRPSLLSPNKRLSSSPSAESESASGRTNQQSVYSTPELRSPAPAQQRSSSSSSSSSRPWRFSKEAPRLSLDSRAVVDAKGCLKHRQIRADAVEAENQRGSPSVIARLMGLEPFPQQPLQRSASESRVTRDYIFDFHDDKGAAQDPAPIRNARAHPTSVVRRKSFFDSGDFFPRVSKMSGFDAPPTDLETLKQLLEALRLKGLLHSSSLKHQSRNLVFDHHSPIKPVRRDRISPSVNRRRPRPTLKEQRRVSSLPWRRPEPLQTRIEDQSSTLAEEEMWKVDVYNRQGKTLLERCDKLLHSIAEMAAAEAGDSQPSPVSVLDASIYHEDSSPSPVLKRTLDFADAEEDESWGGSILSSSDSEYVYISDILRASDCLPQESDSFSFLEKQQYLKGKCASRAAAQERRLIFDAVQEIVARRRSLPPWMMVGEADNKMQVIWSEFQKIRDKKSSTEEDDLVGYVCGVLGRDLSEDRWRDFQVEMSEAVLDVERLIFKDLIGETIRQLAFLNRSDSLRRRLLF", "length": 540, "header": "tr|Q9LY72-1|Q9LY72_ARATH Isoform 1 of Zinc finger CCCH domain protein OS=Arabidopsis thaliana OX=3702 GN=TRM5 PE=1 SV=1 CANONICAL=Q9LY72-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LMK3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY72/entry#A0A1I9LMK3-1", "sequence": { "sequence": "MSVFLQSAESESASGRTNQQSVYSTPELRSPAPAQQRSSSSSSSSSRPWRFSKEAPRLSLDSRAVVDAKGCLKHRQIRADAVEAENQRGSPSVIARLMGLEPFPQQPLQRSASESRVTRDYIFDFHDDKGAAQDPAPIRNARAHPTSVVRRKSFFDSGDFFPRVSKMSGFDAPPTDLETLKQLLEALRLKGLLHSSSLKHQSRNLVFDHHSPIKPVRRDRISPSVNRRRPRPTLKEQRRVSSLPWRRPEPLQTRIEDQSSTLAEEEMWKVDVYNRQGKTLLERCDKLLHSIAEMAAAEAGDSQPSPVSVLDASIYHEDSSPSPVLKRTLDFADAEEDESWGGSILSSSDSEYVYISDILRASDCLPQESDSFSFLEKQQYLKGKCASRAAAQERRLIFDAVQEIVARRRSLPPWMMVGEADNKMQVIWSEFQKIRDKKSSTEEDDLVGYVCGVLGRDLSEDRWRDFQVEMSEAVLDVERLIFKDLIGETIRQLAFLNRSDSLRRRLLF", "length": 508, "header": "tr|A0A1I9LMK3-1|A0A1I9LMK3_ARATH Computationally mapped isoform of Zinc finger CCCH domain protein OS=Arabidopsis thaliana OX=3702 GN=TRM5 PE=1 SV=1 CANONICAL=Q9LY72-1" }, "locus": { "chromosome": "3", "start_pos": 23420145, "end_pos": 23422475, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G63430.2", "url": "https://www.ensemblgenomes.org/id/AT3G63430.2" }, { "database": "Ensembl Peptide", "id": "AT3G63430.2", "url": 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"database": "Ensembl Transcript", "id": "AT3G63430.1", "url": "https://www.ensemblgenomes.org/id/AT3G63430.1" }, { "database": "Ensembl Peptide", "id": "AT3G63430.1", "url": "https://www.ensemblgenomes.org/id/AT3G63430.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, 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Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LY78", "url": "https://www.uniprot.org/uniprotkb/Q9LY78" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LY78", "url": "https://www.uniprot.org/uniprotkb/Q9LY78" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G14510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G14510", "resource": 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}, { "id": "PTHR12224:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12224:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04724", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04724", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_196952", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196952", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G14480", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G14480", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LY81", "url": "https://www.uniprot.org/uniprotkb/Q9LY81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LY81-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDGYYSSKKTDDICDDVCGQDGSRAAKAFSRVRCVLRGFDFKTYIFFFTIVPIFIFGVYLHGQKLTYFLRPLWESPPKPFQTLPHYYHENASMATLCSLHGWKHRESPRRVFDAVLFSNEVDMLTIRWKELYPYITQFVILESNSTFTGLPKPLVFNGNRAKFEFAEPRLSYGNIAGRFKKGENPFVEEAYQRIALDQLIRLAGIEEDDLLIMSDVDEIPSAHTINLLRWCDGYPPILHLQLKNYLYSFEYFVDNKSWRASIHQYKPGKTRYAHFRQGNTLLADSGWHCSFCFRHISEFIFKMKAYSHNDRVRFSHYLNPKRIQDVICKGTDLFDMLPEEYTFREIIGKLGPIPRSYSAVHLPAHLIEKAESYKYLLPGNCIRESG", "length": 387, "header": "tr|Q9LY81-1|Q9LY81_ARATH Isoform 1 of Beta-1,4-N-acetylglucosaminyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LY81-1" }, "isoforms": [ { "isoform_ac": "Q9LY81-1", "url": "https://www.uniprot.org/uniprotkb/Q9LY81/entry#Q9LY81-1", "sequence": { "sequence": "MSDGYYSSKKTDDICDDVCGQDGSRAAKAFSRVRCVLRGFDFKTYIFFFTIVPIFIFGVYLHGQKLTYFLRPLWESPPKPFQTLPHYYHENASMATLCSLHGWKHRESPRRVFDAVLFSNEVDMLTIRWKELYPYITQFVILESNSTFTGLPKPLVFNGNRAKFEFAEPRLSYGNIAGRFKKGENPFVEEAYQRIALDQLIRLAGIEEDDLLIMSDVDEIPSAHTINLLRWCDGYPPILHLQLKNYLYSFEYFVDNKSWRASIHQYKPGKTRYAHFRQGNTLLADSGWHCSFCFRHISEFIFKMKAYSHNDRVRFSHYLNPKRIQDVICKGTDLFDMLPEEYTFREIIGKLGPIPRSYSAVHLPAHLIEKAESYKYLLPGNCIRESG", "length": 387, "header": "tr|Q9LY81-1|Q9LY81_ARATH Isoform 1 of Beta-1,4-N-acetylglucosaminyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LY81-1" }, "locus": { "chromosome": "5", "start_pos": 4667774, "end_pos": 4670213, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G14480.1", "url": "https://www.ensemblgenomes.org/id/AT5G14480.1" }, { "database": "Ensembl Peptide", "id": "AT5G14480.1", "url": "https://www.ensemblgenomes.org/id/AT5G14480.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], 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"reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LY90", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LY90" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen 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"MVLRNLTISYEIIKSLKHAKEHSLGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQVQKDREMMLAAKSNEPIERLCD", "length": 404, "header": "tr|Q9LYB3-1|Q9LYB3_ARATH Isoform 1 of Ubiquitin carboxyl-terminal hydrolase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYB3-1" }, "locus": { "chromosome": "3", "start_pos": 23313428, "end_pos": 23315062, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G63090.1", "url": "https://www.ensemblgenomes.org/id/AT3G63090.1" }, { "database": "Ensembl Peptide", "id": "AT3G63090.1", "url": "https://www.ensemblgenomes.org/id/AT3G63090.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 54, 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Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYB3", "url": "https://www.uniprot.org/uniprotkb/Q9LYB3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYB3", "url": "https://www.uniprot.org/uniprotkb/Q9LYB3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G63090", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G63090", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9LYB3", "url": "https://www.uniprot.org/uniprotkb/Q9LYB3" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9LYB3", "url": "https://www.uniprot.org/uniprotkb/Q9LYB3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYB3" }, { "id": "PF11955", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11955" } ], "ann_type": 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"https://www.ncbi.nlm.nih.gov/protein/NP_191863" }, "gene_names": [], "protein_names": [ { "name": "Plant thionin family protein", "type": "recommended", "evidence": [ { "id": "Q9LYB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_191863", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191863" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYB8", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8", "locus": {} } ], "crossref": [ { "id": "825479", "url": "https://www.ncbi.nlm.nih.gov/gene/825479", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G63040", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G63040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RICHERI", "url": "https://omabrowser.org/oma/group/RICHERI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_191863", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191863", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G63040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G63040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYB8", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYB8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRGMIPTKAKVVVISLIWAILVLESATVSSAVEDLVVEQCKHNCKHDIHNKKKECEDKCNELLMMEIEKETSGRQEEEHNPFCEAFCNPFEGLFQHCMAVCPRTKSKPEMMVIGGEGVANEGLQTKCNRKCLSYTEPEAYKKCISGCFMSNEEVCETSCSILQEEPLTIRCMRICHERIPGVVAST", "length": 187, "header": "tr|Q9LYB8-1|Q9LYB8_ARATH Isoform 1 of Plant thionin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYB8-1" }, "isoforms": [ { "isoform_ac": "Q9LYB8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8/entry#Q9LYB8-1", "sequence": { "sequence": "MTRGMIPTKAKVVVISLIWAILVLESATVSSAVEDLVVEQCKHNCKHDIHNKKKECEDKCNELLMMEIEKETSGRQEEEHNPFCEAFCNPFEGLFQHCMAVCPRTKSKPEMMVIGGEGVANEGLQTKCNRKCLSYTEPEAYKKCISGCFMSNEEVCETSCSILQEEPLTIRCMRICHERIPGVVAST", "length": 187, "header": "tr|Q9LYB8-1|Q9LYB8_ARATH Isoform 1 of Plant thionin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYB8-1" }, "locus": { "chromosome": "3", "start_pos": 23296572, "end_pos": 23297225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G63040.1", "url": "https://www.ensemblgenomes.org/id/AT3G63040.1" }, { "database": "Ensembl Peptide", "id": "AT3G63040.1", "url": "https://www.ensemblgenomes.org/id/AT3G63040.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, 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"database": "UniProtKB", "id": "Q9LYB8", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYB8", "url": "https://www.uniprot.org/uniprotkb/Q9LYB8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G63040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G63040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47873", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47873:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47873:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25598", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25598", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G11550", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G11550", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYD7", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYD7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMKANQKPKPHAPPRPLFSCGFFRRCTQSVLSPTSPHQQQPRRKATTTSSSSSSSSTSTSQSFTQWRFPHHLDQTPSTAPPPPHPPPPPPPLPVTTTLQETFQIAELHLTSVSESDKLLALQLLERVVVPDPPSDPTCPPGLMRGLVSCLRSNNKIVTAKYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAVERALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAVAPAEEVARAVALALEGECTARGKRKGAQLLKTLEEYGRLDLSQNGT", "length": 314, "header": "tr|Q9LYD7-1|Q9LYD7_ARATH Isoform 1 of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYD7-1" }, "isoforms": [ { "isoform_ac": "Q9LYD7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7/entry#Q9LYD7-1", "sequence": { "sequence": "MMKANQKPKPHAPPRPLFSCGFFRRCTQSVLSPTSPHQQQPRRKATTTSSSSSSSSTSTSQSFTQWRFPHHLDQTPSTAPPPPHPPPPPPPLPVTTTLQETFQIAELHLTSVSESDKLLALQLLERVVVPDPPSDPTCPPGLMRGLVSCLRSNNKIVTAKYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAVERALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAVAPAEEVARAVALALEGECTARGKRKGAQLLKTLEEYGRLDLSQNGT", "length": 314, "header": "tr|Q9LYD7-1|Q9LYD7_ARATH Isoform 1 of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYD7-1" }, "locus": { "chromosome": "5", "start_pos": 3707961, "end_pos": 3709403, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G11550.1", "url": "https://www.ensemblgenomes.org/id/AT5G11550.1" }, { "database": "Ensembl Peptide", "id": "AT5G11550.1", "url": "https://www.ensemblgenomes.org/id/AT5G11550.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 46, "end_pos": 46, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYD7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYD7" } ], "site_lbl": "Thr46" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, 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J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYD7", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYD7", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G11550", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11550", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 312, "end_pos": 314, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYD7" }, { "id": "PF25598", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25598" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "U-box", "eco_id": "ECO_0000259", "start_pos": 139, "end_pos": 302, "start_aa": "Pro", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 46 ], "sequon_annotation_sites": [ { "start_pos": 312, "end_pos": 314 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"url": "https://www.uniprot.org/uniprotkb/Q9LYE1" } ] } ], "protein_names": [ { "name": "Coiled-coil protein", "type": "synonym", "evidence": [ { "id": "Q9LYE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYE1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1", "locus": {} } ], "crossref": [ { "id": "AT5G11500", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G11500", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "831022", "url": 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"https://www.orthodb.org/?gene=Q9LYE1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13049", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13049", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13049:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13049:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G11500", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G11500", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JXW2", "url": "https://www.uniprot.org/uniprotkb/F4JXW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JXW2-1", "url": "https://www.uniprot.org/uniprotkb/F4JXW2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYE1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYE1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFDDISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIRVEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKKKREEIDRLEKERQSEMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM", "length": 215, "header": "tr|Q9LYE1-1|Q9LYE1_ARATH Isoform 1 of Coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYE1-1" }, "isoforms": [ { "isoform_ac": "F4JXW2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1/entry#F4JXW2-1", "sequence": { "sequence": "MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFDDISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIRVEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKKREEIDRLEKERQSEMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM", "length": 214, "header": "tr|F4JXW2-1|F4JXW2_ARATH Computationally mapped isoform of Coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYE1-1" }, "locus": { "chromosome": "5", "start_pos": 3676548, "end_pos": 3678974, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G11500.2", "url": "https://www.ensemblgenomes.org/id/AT5G11500.2" }, { "database": "Ensembl Peptide", "id": "AT5G11500.2", "url": "https://www.ensemblgenomes.org/id/AT5G11500.2" } ] } }, { "isoform_ac": "Q9LYE1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1/entry#Q9LYE1-1", "sequence": { "sequence": "MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFDDISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIRVEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKKKREEIDRLEKERQSEMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM", "length": 215, "header": "tr|Q9LYE1-1|Q9LYE1_ARATH Isoform 1 of Coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYE1-1" }, "locus": { "chromosome": "5", "start_pos": 3676565, "end_pos": 3679738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G11500.1", "url": "https://www.ensemblgenomes.org/id/AT5G11500.1" }, { "database": "Ensembl Peptide", "id": "AT5G11500.1", "url": "https://www.ensemblgenomes.org/id/AT5G11500.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 102, "end_pos": 102, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser102" }, { "start_pos": 196, "end_pos": 196, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser196" }, { "start_pos": 58, "end_pos": 58, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser58" }, { "start_pos": 63, "end_pos": 63, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser63" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYE1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYE1", "url": "https://www.uniprot.org/uniprotkb/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9LYE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYE1" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT5G11500", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11500", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A4X1VBD7-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "CCDC25", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDLEAEKECRDREERNEKKAQIQEMKRREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM", "length": 208 }, "evidence": [ { "id": "Q9LYE1", "url": "https://omabrowser.org/oma/group/Q9LYE1/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8C2M417-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Ccdc25", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": 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"evidence": [ { "id": "Q9LYE1", "url": "https://omabrowser.org/oma/group/Q9LYE1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55D55-1", "protein_name": "Coiled-coil domain-containing protein 25 homolog", "gene_name": "ccdc25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLYFKLIDPEYICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETWNDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYVRNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEKRRAEKKAYEEKQKMEDIKKYTSIMKTDNMKFNKYNPTDEDDFM", "length": 206 }, "evidence": [ { "id": "Q9LYE1", "url": "https://omabrowser.org/oma/group/Q9LYE1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q78PG9-1", "protein_name": "Coiled-coil domain-containing protein 25", "gene_name": "Ccdc25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"MKPSFSISKPKSQVKNKIEGKKIIECPNGTVPILRNTKEYVARAQYWEKKHFNPHTVGSHGTHYAGVKSQGDGPYHGLAAYMSVHDLNISRDQTSYASIFVGSGDNKKINFIQTGWMVNPSLFGDGRTWSFGVWKGANGTGCYNTICPGFVQVSKTDLLSAPFPYPHKGQERAVYASIVQEKDIGNWWVTDVRYDRPDVHIGYWPKELFDLIGNSVDMVGVAGAVQASPSGISPPMGNGQLPSEDENKSAHVKGVQIVHSDFKYSKKLKLEKLLDDNKCYGLKDGKKQFFKESNLFTYGGPGGNSCGI", "length": 308, "header": "tr|Q9LYG4-1|Q9LYG4_ARATH Isoform 1 of NEP-interacting protein, putative (DUF239) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYG4-1" }, "isoforms": [ { "isoform_ac": "Q9LYG4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYG4/entry#Q9LYG4-1", "sequence": { "sequence": "MKPSFSISKPKSQVKNKIEGKKIIECPNGTVPILRNTKEYVARAQYWEKKHFNPHTVGSHGTHYAGVKSQGDGPYHGLAAYMSVHDLNISRDQTSYASIFVGSGDNKKINFIQTGWMVNPSLFGDGRTWSFGVWKGANGTGCYNTICPGFVQVSKTDLLSAPFPYPHKGQERAVYASIVQEKDIGNWWVTDVRYDRPDVHIGYWPKELFDLIGNSVDMVGVAGAVQASPSGISPPMGNGQLPSEDENKSAHVKGVQIVHSDFKYSKKLKLEKLLDDNKCYGLKDGKKQFFKESNLFTYGGPGGNSCGI", "length": 308, "header": "tr|Q9LYG4-1|Q9LYG4_ARATH Isoform 1 of NEP-interacting protein, putative (DUF239) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYG4-1" }, "locus": { "chromosome": "5", "start_pos": 3748880, "end_pos": 3750317, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G11660.1", "url": "https://www.ensemblgenomes.org/id/AT5G11660.1" }, { "database": "Ensembl Peptide", "id": "AT5G11660.1", "url": "https://www.ensemblgenomes.org/id/AT5G11660.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG4", "url": "https://www.uniprot.org/uniprotkb/Q9LYG4" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG4", "url": "https://www.uniprot.org/uniprotkb/Q9LYG4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G11660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11660", "resource": "KEGG Pathway" } ], "orthologs": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LYG8-1", "uniprot_ac": "Q9LYG8", "uniprot_id": "Q9LYG8_ARATH", "mass": { "chemical_mass": 30608.0, "monoisotopic_mass": 30608.0 }, "refseq": {}, "gene_names": [ { "name": "T22P22.10", "type": "synonym", "evidence": [ { "id": "Q9LYG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ] }, { "name": "T22P22_10", "type": "synonym", "evidence": [ { "id": "Q9LYG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ] } ], "protein_names": [ { "name": "SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein", "type": "synonym", "evidence": [ { "id": "Q9LYG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8", "locus": {} } ], "crossref": [ { "id": "831034", "url": "https://www.ncbi.nlm.nih.gov/gene/831034", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LYG8", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LYG8*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR007527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039903", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039903", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G11620", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11620", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ICVVCRA", "url": "https://omabrowser.org/oma/group/ICVVCRA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR21540", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21540", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21540:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21540:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04434", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04434", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G11620", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G11620", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYG8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESVGSNQISPYVSNRDQRHFLAQPVADRILRALRHRIRLLHRPNAGTFHVLGATCNVYTVTLMATPTCTCPDRKKPCKHILFVLIRVLGIPLDDKCLRQRRLRTCLLFHLFSAPTRPDCLASFRLQQRFLQLFPATTSQPGYTTNSSSSTSKMENEVDEEPATCPICLDDIIAIENVDGGNGGGKEKETAVVKCRVCKNKVHDECMLAWRKSRGRRPAICVVCRARWPANRSSKNPNVGDNNENCHGNCYLNLAPYVDEEVEDGVGTSQRPC", "length": 273, "header": "tr|Q9LYG8-1|Q9LYG8_ARATH Isoform 1 of SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYG8-1" }, "isoforms": [ { "isoform_ac": "Q9LYG8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8/entry#Q9LYG8-1", "sequence": { "sequence": "MESVGSNQISPYVSNRDQRHFLAQPVADRILRALRHRIRLLHRPNAGTFHVLGATCNVYTVTLMATPTCTCPDRKKPCKHILFVLIRVLGIPLDDKCLRQRRLRTCLLFHLFSAPTRPDCLASFRLQQRFLQLFPATTSQPGYTTNSSSSTSKMENEVDEEPATCPICLDDIIAIENVDGGNGGGKEKETAVVKCRVCKNKVHDECMLAWRKSRGRRPAICVVCRARWPANRSSKNPNVGDNNENCHGNCYLNLAPYVDEEVEDGVGTSQRPC", "length": 273, "header": "tr|Q9LYG8-1|Q9LYG8_ARATH Isoform 1 of SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYG8-1" }, "locus": { "chromosome": "5", "start_pos": 3738945, "end_pos": 3740146, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G11620.2", "url": "https://www.ensemblgenomes.org/id/AT5G11620.2" }, { "database": "Ensembl Peptide", "id": "AT5G11620.2", "url": "https://www.ensemblgenomes.org/id/AT5G11620.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G11620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G11620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "Q9LYG8", "url": "https://www.uniprot.org/uniprotkb/Q9LYG8" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": 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"Protein Classification" ] }, { "id": "ath:AT3G56180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G56180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EKALSWK", "url": "https://omabrowser.org/oma/group/EKALSWK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LQL5", "url": "https://www.orthodb.org/?gene=A0A1I9LQL5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LYM3", "url": "https://www.orthodb.org/?gene=Q9LYM3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31087", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31087", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31087:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31087:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LYM3", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LYM3", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191177", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G56180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G56180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQL5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQL5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYM3", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYM3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPKNKKTEWQVGDPAISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPAGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNTCDFHASGGYSNISFKVFKADALIAGVGFTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMVDDNENWC", "length": 204, "header": "sp|Q9LYM3-1|LOR14_ARATH Isoform 1 of Protein LURP-one-related 14 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9LYM3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQL5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3/entry#A0A1I9LQL5-1", "sequence": { "sequence": "MPKNKKTEWQVGDPAISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPAGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNTCDFHASGGYSNISFKVFKADALIAGVTHKFTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMVDDNENWC", "length": 206, "header": "tr|A0A1I9LQL5-1|A0A1I9LQL5_ARATH Computationally mapped isoform of LURP-one-like protein (DUF567) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYM3-1" }, "locus": { "chromosome": "3", "start_pos": 20844611, "end_pos": 20845758, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56180.2", "url": "https://www.ensemblgenomes.org/id/AT3G56180.2" }, { "database": "Ensembl Peptide", "id": "AT3G56180.2", "url": "https://www.ensemblgenomes.org/id/AT3G56180.2" } ] } }, { "isoform_ac": "Q9LYM3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3/entry#Q9LYM3-1", "sequence": { "sequence": "MPKNKKTEWQVGDPAISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPAGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNTCDFHASGGYSNISFKVFKADALIAGVGFTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMVDDNENWC", "length": 204, "header": "sp|Q9LYM3-1|LOR14_ARATH Isoform 1 of Protein LURP-one-related 14 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9LYM3-1" }, "locus": { "chromosome": "3", "start_pos": 20844667, "end_pos": 20845692, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56180.1", "url": "https://www.ensemblgenomes.org/id/AT3G56180.1" }, { "database": "Ensembl Peptide", "id": "AT3G56180.1", "url": "https://www.ensemblgenomes.org/id/AT3G56180.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYM3", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYM3", "url": "https://www.uniprot.org/uniprotkb/Q9LYM3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G56180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G56180", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": 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"https://www.ncbi.nlm.nih.gov/protein/NP_196851", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G13470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G13470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYQ9", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYQ9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLVDYDDSSSDDDVLAAEEKPLPQTQKRLVSPAQSFPPKRQRFEQDESVEKLPDALLLLESPTLAQVTGGDHASVVAAAMAESALRKRDLSGNASSLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFVKKRQDSTKAKSPDQE", "length": 159, "header": "tr|Q9LYQ9-1|Q9LYQ9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYQ9-1" }, "isoforms": [ { "isoform_ac": "Q9LYQ9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9/entry#Q9LYQ9-1", "sequence": { "sequence": "MSLVDYDDSSSDDDVLAAEEKPLPQTQKRLVSPAQSFPPKRQRFEQDESVEKLPDALLLLESPTLAQVTGGDHASVVAAAMAESALRKRDLSGNASSLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFVKKRQDSTKAKSPDQE", "length": 159, "header": "tr|Q9LYQ9-1|Q9LYQ9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYQ9-1" }, "locus": { "chromosome": "5", "start_pos": 4318460, "end_pos": 4319924, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G13470.1", "url": "https://www.ensemblgenomes.org/id/AT5G13470.1" }, { "database": "Ensembl Peptide", "id": "AT5G13470.1", "url": "https://www.ensemblgenomes.org/id/AT5G13470.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYQ9", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYQ9", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G13470", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13470", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYQ9", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 94, "end_pos": 96, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LYS4-1", "uniprot_ac": "Q9LYS4", "uniprot_id": "Q9LYS4_ARATH", "mass": { "chemical_mass": 69857.0, "monoisotopic_mass": 69857.0 }, "refseq": { "ac": "NP_191471", "name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191471" }, "gene_names": [], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "NP_191471", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191471" }, { "id": "Q9LYS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYS4", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4", "locus": {} } ], "crossref": [ { "id": "AT3G59120", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59120", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825081", "url": "https://www.ncbi.nlm.nih.gov/gene/825081", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G59120", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59120", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HGENDDV", "url": "https://omabrowser.org/oma/group/HGENDDV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LSZ4", "url": "https://www.orthodb.org/?gene=A0A1I9LSZ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LYS4", "url": "https://www.orthodb.org/?gene=Q9LYS4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF168", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF168", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191471", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59120", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59120", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LSZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYS4", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYS4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGDEEGPRCIVSDPAHPHNVSRRDNYKVKHNCFSCGKNDVSWELRGFTDNFHYYCTICDIEFHRRCLQIPSKMIHPYHPQHPLTFTFVSYETKIVVDVNYGDFCTFLCRSGLNMPEYLQTIGSKSNIIFDKCTLCGNVLSEWFYRCSICNFFLDFRCARNFPPLTIQNPRSHHHSLALFRRPVSFPCDACGLINLLDPSYACHQCDYMVHKSCVDLPRVIKITRHPHRLSHTPHLPTKVSLCRVCYKHVDIKYGQYSCTHEGCTYVVHSKCATHRKIWNGGELEWAPEEPDETEAIAPFKKVGDGLIQHFCHHLHILKLEKYDRVRDSAKQCQACMRPISSQDFYNCMECDFFLHEVCANLPRKLEHALHHHPLFIDPYPLYDHDCGNLACSVCFRKSSGLMYRCREEECVGYEQFQLDLNCVLVPEYFTHKSHAEHHVFISPSYSEENEALCQGCKKRVYNYHLHCSLCEFVLCYECATIPNEIHYKFDEHSLTLSYGESGVDDKYWCEVCEKGLDPTEWFYINKESCTTIHHKCLFGDSGYMKPGHIFDYCGNKVEVVGNGSSSRPICLTCQYHCPHHKKHEKTHLPSIGRAFDGVKLLS", "length": 602, "header": "tr|Q9LYS4-1|Q9LYS4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYS4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4/entry#A0A1I9LSZ4-1", "sequence": { "sequence": "MRHRVPQEMSSDSKNFPPLTIQNPRSHHHSLALFRRPVSFPCDACGLINLLDPSYACHQCDYMVHKSCVDLPRVIKITRHPHRLSHTPHLPTKVSLCRVCYKHVDIKYGQYSCTHEGCTYVVHSKCATHRKIWNGGELEWAPEEPDETEAIAPFKKVGDGLIQHFCHHLHILKLEKYDRVRDSAKQCQACMRPISSQDFYNCMECDFFLHEVCANLPRKLEHALHHHPLFIDPYPLYDHDCGNLACSVCFRKSSGLMYRCREEECVGYEQFQLDLNCVLVPEYFTHKSHAEHHVFISPSYSEENEALCQGCKKRVYNYHLHCSLCEFVLCYECATIPNEIHYKFDEHSLTLSYGESGVDDKYWCEVCEKGLDPTEWFYINKESCTTIHHKCLFGDSGYMKPGHIFDYCGNKVEVVGNGSSSRPICLTCQYHCPHHVCFKVCMIDGTEIYFCAFSCIRL", "length": 458, "header": "tr|A0A1I9LSZ4-1|A0A1I9LSZ4_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYS4-1" }, "locus": { "chromosome": "3", "start_pos": 21858235, "end_pos": 21860302, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59120.2", "url": "https://www.ensemblgenomes.org/id/AT3G59120.2" }, { "database": "Ensembl Peptide", "id": "AT3G59120.2", "url": "https://www.ensemblgenomes.org/id/AT3G59120.2" } ] } }, { "isoform_ac": "Q9LYS4-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYS4/entry#Q9LYS4-1", "sequence": { "sequence": "MGDEEGPRCIVSDPAHPHNVSRRDNYKVKHNCFSCGKNDVSWELRGFTDNFHYYCTICDIEFHRRCLQIPSKMIHPYHPQHPLTFTFVSYETKIVVDVNYGDFCTFLCRSGLNMPEYLQTIGSKSNIIFDKCTLCGNVLSEWFYRCSICNFFLDFRCARNFPPLTIQNPRSHHHSLALFRRPVSFPCDACGLINLLDPSYACHQCDYMVHKSCVDLPRVIKITRHPHRLSHTPHLPTKVSLCRVCYKHVDIKYGQYSCTHEGCTYVVHSKCATHRKIWNGGELEWAPEEPDETEAIAPFKKVGDGLIQHFCHHLHILKLEKYDRVRDSAKQCQACMRPISSQDFYNCMECDFFLHEVCANLPRKLEHALHHHPLFIDPYPLYDHDCGNLACSVCFRKSSGLMYRCREEECVGYEQFQLDLNCVLVPEYFTHKSHAEHHVFISPSYSEENEALCQGCKKRVYNYHLHCSLCEFVLCYECATIPNEIHYKFDEHSLTLSYGESGVDDKYWCEVCEKGLDPTEWFYINKESCTTIHHKCLFGDSGYMKPGHIFDYCGNKVEVVGNGSSSRPICLTCQYHCPHHKKHEKTHLPSIGRAFDGVKLLS", "length": 602, "header": "tr|Q9LYS4-1|Q9LYS4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LYS4-1" }, "locus": { "chromosome": "3", "start_pos": 21857876, "end_pos": 21860275, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59120.1", "url": "https://www.ensemblgenomes.org/id/AT3G59120.1" }, { "database": "Ensembl Peptide", "id": "AT3G59120.1", "url": "https://www.ensemblgenomes.org/id/AT3G59120.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, 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"MLPKFDLTDPKASLSLLEDVTTNVTQIQDSILEAVLSRNAHTEYLKGFLNGQVDKQTFKKNVPIVTYEDIKPYINRIANGEASDLICDRPISLLVMSSGTTAGIQNLIPLTTEDGEQRIMFGSLYRSLLYKYVEGIREGKSLTFYFVNPERETASGILIRTMITCILKSVNKTNSSLWDRLQISPHEISTCEDTTQSMYCQLLCGLLQRDNVARLGAPFASVFIRVIKYLEGHWQELCSNIRTGRLSDWITDPQCVSGISKFLTAPNPDLASLIEQECSKTSWEAIVKRLWPKAKCVEAVVTGSMAQYIPLLEFYGGGLPLISSWYGSSECFMGVNVNPLCKPSDVSYTIIPSMAYFEFLEVKKDQQEAGLDPIENHVVVDLVDVKIGHDYEPVVTTFSGLYRYRVGDLLRVTGFYNNSPHFRFVGRQKVVLSLHMANTYEEDLLKAVTNAKLLLEPHDLMLMEFTSRVDSSSFVGHYVLYWELGSKVKDAKLEPNRDVMEECCFTVEKYLDPLYRQERRKDKNIGPLEIKVVKPGAFDELMNFFLSRGSSVSQYKTPRSVKTEEAVKILEANVVSEFLSQETPPWG", "length": 587, "header": "tr|Q9LYU1-1|Q9LYU1_ARATH Isoform 1 of Auxin-responsive GH3 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYU1-1" }, "isoforms": [ { "isoform_ac": "Q9LYU1-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU1/entry#Q9LYU1-1", "sequence": { "sequence": "MLPKFDLTDPKASLSLLEDVTTNVTQIQDSILEAVLSRNAHTEYLKGFLNGQVDKQTFKKNVPIVTYEDIKPYINRIANGEASDLICDRPISLLVMSSGTTAGIQNLIPLTTEDGEQRIMFGSLYRSLLYKYVEGIREGKSLTFYFVNPERETASGILIRTMITCILKSVNKTNSSLWDRLQISPHEISTCEDTTQSMYCQLLCGLLQRDNVARLGAPFASVFIRVIKYLEGHWQELCSNIRTGRLSDWITDPQCVSGISKFLTAPNPDLASLIEQECSKTSWEAIVKRLWPKAKCVEAVVTGSMAQYIPLLEFYGGGLPLISSWYGSSECFMGVNVNPLCKPSDVSYTIIPSMAYFEFLEVKKDQQEAGLDPIENHVVVDLVDVKIGHDYEPVVTTFSGLYRYRVGDLLRVTGFYNNSPHFRFVGRQKVVLSLHMANTYEEDLLKAVTNAKLLLEPHDLMLMEFTSRVDSSSFVGHYVLYWELGSKVKDAKLEPNRDVMEECCFTVEKYLDPLYRQERRKDKNIGPLEIKVVKPGAFDELMNFFLSRGSSVSQYKTPRSVKTEEAVKILEANVVSEFLSQETPPWG", "length": 587, "header": "tr|Q9LYU1-1|Q9LYU1_ARATH Isoform 1 of Auxin-responsive GH3 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYU1-1" }, "locus": { "chromosome": "5", "start_pos": 4279884, "end_pos": 4282287, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G13350.2", "url": "https://www.ensemblgenomes.org/id/AT5G13350.2" }, { "database": "Ensembl Peptide", "id": "AT5G13350.2", "url": "https://www.ensemblgenomes.org/id/AT5G13350.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU1" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G13350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU1" } ], "pmid": "" }, { "name": "cytoplasm", "id": 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"Protein Classification" ] }, { "id": "PF15346", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15346", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_196838", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196838", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G13340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G13340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYU2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARNDSRSRSPSHRRRYSRSPVTHRSSRRTRRDRSRSPYTSRHKKSRSPAPRQHQRDRSSSLSPSEHRIAIEVKKEQEDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELELLQRQKEEAARRKKLEEEEEIRNSSKLSNGNRSRSKLHFGMGL", "length": 242, "header": "tr|Q9LYU2-1|Q9LYU2_ARATH Isoform 1 of Arginine/glutamate-rich 1 protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYU2-1" }, "isoforms": [ { "isoform_ac": "Q9LYU2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2/entry#Q9LYU2-1", "sequence": { "sequence": "MARNDSRSRSPSHRRRYSRSPVTHRSSRRTRRDRSRSPYTSRHKKSRSPAPRQHQRDRSSSLSPSEHRIAIEVKKEQEDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELELLQRQKEEAARRKKLEEEEEIRNSSKLSNGNRSRSKLHFGMGL", "length": 242, "header": "tr|Q9LYU2-1|Q9LYU2_ARATH Isoform 1 of Arginine/glutamate-rich 1 protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYU2-1" }, "locus": { "chromosome": "5", "start_pos": 4277546, "end_pos": 4279493, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G13340.1", "url": "https://www.ensemblgenomes.org/id/AT5G13340.1" }, { "database": "Ensembl Peptide", "id": "AT5G13340.1", "url": "https://www.ensemblgenomes.org/id/AT5G13340.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G13340", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13340", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A5G2RFB3-1", "protein_name": "Arginine and glutamate rich 1", "gene_name": "ARGLU1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "PGTCGARNQRLVTASSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD", "length": 279 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q2TA42-1", "protein_name": "Arginine and glutamate-rich protein 1", "gene_name": "ARGLU1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD", "length": 273 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UL36-1", "protein_name": "Arginine and glutamate-rich protein 1", "gene_name": "Arglu1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNAAASRRERERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD", "length": 271 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5BJT0-1", "protein_name": "Arginine and glutamate-rich protein 1", "gene_name": "Arglu1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNAAASRRERERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD", "length": 271 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5ZL35-1", "protein_name": "Arginine and glutamate-rich protein 1", "gene_name": "ARGLU1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGRSRSRSSSRSKHTKSSKHNKKNRSRSRSRSREKERARKRSKSRESKRNRRRESRSRSRSNTAPSSRRDRERERERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLKIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKSQD", "length": 276 }, "evidence": [ { "id": "Q9LYU2", "url": 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"MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD", "length": 273 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VL63-1", "protein_name": "Arginine and glutamate-rich protein 1", "gene_name": "Arglu1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MGSRSRTPSPSGKRRHHKSKHKKRSKSHHDHERPSTRTDRDKSSEVNNHGRHRERDRDRERDRHRSDRHTERDYRHSPSILKSRKRSSSSSSDSQYSEQESQRSKQKRSRFKKLDEQNQMQVERLAEMERQRRAKELEQKTIEEEAAKRIEMLVKKRVEEELEKRRDEIEQEVNRRVETAKAEMEREMMLELERRREQIREEERRREEDEKQKREELEEILAENNRKIEEAQRKLAEERLAIIEEQRLMDEERQRMRKEQEKRVKEEQKVILGKNNSRPKLSFSLKPGAL", "length": 290 }, "evidence": [ { "id": "Q9LYU2", "url": "https://omabrowser.org/oma/group/Q9LYU2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU2", "url": "https://www.uniprot.org/uniprotkb/Q9LYU2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 222, "end_pos": 224, "annotation": "n_glycosylation_sequon" }, { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 222, "end_pos": 224 }, { "start_pos": 230, "end_pos": 232 }, { "start_pos": 4, "end_pos": 6 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"mass": { "chemical_mass": 41056.0, "monoisotopic_mass": 41056.0 }, "refseq": { "ac": "NP_001331631", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331631" }, "gene_names": [ { "name": "T22N19.1", "type": "synonym", "evidence": [ { "id": "NP_001331631", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331631" }, { "id": "Q9LYU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LYU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001331631", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331631" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5", "locus": {} } ], "crossref": [ { "id": "831172", "url": "https://www.ncbi.nlm.nih.gov/gene/831172", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9LYU5", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9LYU5*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR029338", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029338", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G13310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RDEIPCA", "url": 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"categories": [ "Protein" ] }, { "id": "Q9LYU5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSGSADEDFQSRVAKIFGSLPFSRPSSSKFSTSSSAPASRQQSGSVWTLSDTEVEKREWKRDSYDRDEIPCASSFDELLKQQKPSEDDLKDIDCGEDFDGVWSIRASMGLDRTLDDEAEEDEYDKVALGEENDGEGCGRIRDPRANYVAARIRLKEDEIEANKFNTSASQPSESKEPHAEESSEAMPRKPILKRKENSSDSEARTSKRVRFDSVPEETLKKPEDTCSASASSKIVSHQGKSGARVPDYLLNPSSYTRYSFDPSCELDVESPTGEYMDTPNAVEGLKNPESESFPKVSFIPQNKTKDVSEDSSNCNETKPIVAGELAEEERPSATEDGDTEIRESESCTSFQSKGRQYRAKLSLDETDV", "length": 370, "header": "tr|Q9LYU5-1|Q9LYU5_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYU5-1" }, "isoforms": [ { "isoform_ac": "Q9LYU5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5/entry#Q9LYU5-1", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LYU5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYU5" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G13310", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13310", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "pmid": "" }, { "name": "U5 snRNP", "id": "GO:0005682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005682", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "spliceosomal tri-snRNP complex assembly", "id": "GO:0000244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000244", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "molecular sequestering activity", "id": "GO:0140313", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140313", "evidence": [ { "database": "UniProtKB", "id": "Q9LYU5", "url": "https://www.uniprot.org/uniprotkb/Q9LYU5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 167, "end_pos": 169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 304, "end_pos": 306, "annotation": "n_glycosylation_sequon" }, { "start_pos": 317, "end_pos": 319, "annotation": "n_glycosylation_sequon" 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"gene_names": [ { "name": "T31B5.30", "type": "synonym", "evidence": [ { "id": "Q9LYV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5" } ] }, { "name": "T31B5_30", "type": "synonym", "evidence": [ { "id": "Q9LYV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5" } ] } ], "protein_names": [ { "name": "Uncharacterized conserved protein UCP015417, vWA", "type": "synonym", "evidence": [ { "id": "Q9LYV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LYV5", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5", "locus": {} } ], "crossref": [ { "id": "AT5G13210", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G13210", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "831161", "url": "https://www.ncbi.nlm.nih.gov/gene/831161", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011205", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011205", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056690", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056690", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058580", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058580", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G13210", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G13210", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HGVSHGY", "url": "https://omabrowser.org/oma/group/HGVSHGY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31373", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31373", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31373:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31373:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25043", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25043", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G13210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G13210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYV5", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYV5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSPSPLLGPPELRDPNSLLPKPTTTSGPSDPFMDAMVSNFNNSARVNNVNSPPMGYTENKSATYLSSGNPCLDFFFHVVPSTPKHSLEQWLQGAWDHDALTTLKLICNLRGVRGTGKSDKEGFYTAALWLHGRHPKTLACNLESLSQFGYFKDFPELLYRILQGSEIRKIQKSERFKRKSEALDRRAPYDGHCYHGRLYGGRGRGSSRPSSKRKPVATRALRVANAERKNQAEKARASLDRKKKKVSMGKDAFTRYSCDPDYRYLHERVSDLFANQLKKDLEFLTSDKPNEISLAAKWCPSLDSSFDKATLLCESIARKIFTRESFPEYEGVVEAHYAYRVRDRLRKDVLVPLRKTLQLPEVYMGARNWDILPYNRVASVAMKSYKEIFLKHDAERFQQYLDDAKAGKTKVAAGAVLPHEIIRELDGGDGGQVAELQWKRTVDDMKEKGSLRNCIAVCDVSGSMNGEPMEVCVALGLLVSELSEEPWKGKLITFSQNPELHLVKGDDLYSKTEFVKKMQWGMNTDFQKVFDLILGVAVQEKLKPEEMIKRVFVFSDMEFDQAASSSHYSRPGYAFLRQPPSNPSNGWETDYEVIVRKYKQNGYGDVVPEIVFWNLRDSRATPVPGNKKGVALVSGFSKNLMKMFLEHDGEIDPVMMMETAISKDEYKSLVVVD", "length": 673, "header": "tr|Q9LYV5-1|Q9LYV5_ARATH Isoform 1 of Uncharacterized conserved protein UCP015417, vWA OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYV5-1" }, "isoforms": [ { "isoform_ac": "Q9LYV5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYV5/entry#Q9LYV5-1", "sequence": { "sequence": "MSPSPLLGPPELRDPNSLLPKPTTTSGPSDPFMDAMVSNFNNSARVNNVNSPPMGYTENKSATYLSSGNPCLDFFFHVVPSTPKHSLEQWLQGAWDHDALTTLKLICNLRGVRGTGKSDKEGFYTAALWLHGRHPKTLACNLESLSQFGYFKDFPELLYRILQGSEIRKIQKSERFKRKSEALDRRAPYDGHCYHGRLYGGRGRGSSRPSSKRKPVATRALRVANAERKNQAEKARASLDRKKKKVSMGKDAFTRYSCDPDYRYLHERVSDLFANQLKKDLEFLTSDKPNEISLAAKWCPSLDSSFDKATLLCESIARKIFTRESFPEYEGVVEAHYAYRVRDRLRKDVLVPLRKTLQLPEVYMGARNWDILPYNRVASVAMKSYKEIFLKHDAERFQQYLDDAKAGKTKVAAGAVLPHEIIRELDGGDGGQVAELQWKRTVDDMKEKGSLRNCIAVCDVSGSMNGEPMEVCVALGLLVSELSEEPWKGKLITFSQNPELHLVKGDDLYSKTEFVKKMQWGMNTDFQKVFDLILGVAVQEKLKPEEMIKRVFVFSDMEFDQAASSSHYSRPGYAFLRQPPSNPSNGWETDYEVIVRKYKQNGYGDVVPEIVFWNLRDSRATPVPGNKKGVALVSGFSKNLMKMFLEHDGEIDPVMMMETAISKDEYKSLVVVD", "length": 673, "header": "tr|Q9LYV5-1|Q9LYV5_ARATH Isoform 1 of Uncharacterized conserved protein UCP015417, vWA OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYV5-1" }, "locus": { "chromosome": "5", "start_pos": 4213955, "end_pos": 4216908, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G13210.1", "url": "https://www.ensemblgenomes.org/id/AT5G13210.1" }, { "database": "Ensembl Peptide", "id": "AT5G13210.1", "url": "https://www.ensemblgenomes.org/id/AT5G13210.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 2, "end_pos": 2, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYV5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYV5" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ], "site_lbl": "Ser2" }, { "start_pos": 4, "end_pos": 4, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LYV5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LYV5" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ], "site_lbl": "Ser4" } ], 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"Protein Classification" ] }, { "id": "PTHR45763", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45763", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45763:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45763:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G02970", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G02970", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LYY8", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYY8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEIRGVPTWQEELASLVDAGLRYDGAPIDLTAATKRSGFVSADGSGSEPKETLKDQVTGFMKSWGEMLLELAKGCKDIVQQTVVTDDSFLVRKLRKPAAKVSKKLSFLNEFLPEDRDPIHAWPVIFFVFLLALAALSFSPENDRPVTVITKLRLHPTGATRVQLPDGRYIAYQELGVSAERARYSLVMPHSFLSSRLAGIPGVKKSLLVEYGVRLVSYDLPGFGESDPHRGRNLSSSASDMINLAAAIGIDEKFWLLGYSTGSIHTWAGMKYFPEKIAGAAMVAPVINPYEPSMVKEEVVKTWEQWLTKRKFMYFLARRFPILLPFFYRRSFLSGNLDQLDQWMALSLGEKDKLLIKDPTFQEVYQRNVEESVRQGITKPFVEEAVLQVSNWGFTLSEFRTQKKCATNGVLSWLMSMYSEAECELIGFRKPIHIWQGMEDRVAPPSMSDYISRMIPEATVHKIRNEGHFSFFYFCDECHRQIFYALFGEPKGQLERVKETEDTVVETEAHKDT", "length": 514, "header": "tr|Q9LYY8-1|Q9LYY8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYY8-1" }, "isoforms": [ { "isoform_ac": "Q9LYY8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8/entry#Q9LYY8-1", "sequence": { "sequence": "MEEIRGVPTWQEELASLVDAGLRYDGAPIDLTAATKRSGFVSADGSGSEPKETLKDQVTGFMKSWGEMLLELAKGCKDIVQQTVVTDDSFLVRKLRKPAAKVSKKLSFLNEFLPEDRDPIHAWPVIFFVFLLALAALSFSPENDRPVTVITKLRLHPTGATRVQLPDGRYIAYQELGVSAERARYSLVMPHSFLSSRLAGIPGVKKSLLVEYGVRLVSYDLPGFGESDPHRGRNLSSSASDMINLAAAIGIDEKFWLLGYSTGSIHTWAGMKYFPEKIAGAAMVAPVINPYEPSMVKEEVVKTWEQWLTKRKFMYFLARRFPILLPFFYRRSFLSGNLDQLDQWMALSLGEKDKLLIKDPTFQEVYQRNVEESVRQGITKPFVEEAVLQVSNWGFTLSEFRTQKKCATNGVLSWLMSMYSEAECELIGFRKPIHIWQGMEDRVAPPSMSDYISRMIPEATVHKIRNEGHFSFFYFCDECHRQIFYALFGEPKGQLERVKETEDTVVETEAHKDT", "length": 514, "header": "tr|Q9LYY8-1|Q9LYY8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYY8-1" }, "locus": { "chromosome": "5", "start_pos": 694783, "end_pos": 697732, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02970.1", "url": "https://www.ensemblgenomes.org/id/AT5G02970.1" }, { "database": "Ensembl Peptide", "id": "AT5G02970.1", "url": "https://www.ensemblgenomes.org/id/AT5G02970.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYY8", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYY8", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02970", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02970", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LYY8", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 234, "end_pos": 236, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYY8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYY8" }, { "id": "PF00561", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AB hydrolase-1", "eco_id": "ECO_0000259", "start_pos": 187, "end_pos": 473, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 234, "end_pos": 236 } ] }, "class_list": [], "section_stats": 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSSQSSSDLDSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWIFSICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPTPTPTM", "length": 176, "header": "tr|Q9LZ58-1|Q9LZ58_ARATH Isoform 1 of 60S ribosomal protein L36 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZ58-1" }, "isoforms": [ { "isoform_ac": "Q9LZ58-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ58/entry#Q9LZ58-1", "sequence": { "sequence": "MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSSQSSSDLDSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWIFSICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPTPTPTM", "length": 176, "header": "tr|Q9LZ58-1|Q9LZ58_ARATH Isoform 1 of 60S ribosomal protein L36 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZ58-1" }, "locus": { "chromosome": "5", "start_pos": 531028, "end_pos": 532938, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02440.1", "url": "https://www.ensemblgenomes.org/id/AT5G02440.1" }, { "database": "Ensembl Peptide", "id": "AT5G02440.1", "url": "https://www.ensemblgenomes.org/id/AT5G02440.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 173, "start_aa": "Thr", "end_pos": 173, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr173", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ58", "url": "https://www.uniprot.org/uniprotkb/Q9LZ58" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ58", "url": "https://www.uniprot.org/uniprotkb/Q9LZ58" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ58", "url": "https://www.uniprot.org/uniprotkb/Q9LZ58" } ], "pmid": "" }, { "name": "ribosome", "id": "GO:0005840", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005840", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ58", "url": "https://www.uniprot.org/uniprotkb/Q9LZ58" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 128, "end_pos": 130, "annotation": "n_glycosylation_sequon" }, { "start_pos": 91, "end_pos": 93, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 173 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 128, "end_pos": 130 }, { "start_pos": 91, "end_pos": 93 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZ59", "url": "https://www.uniprot.org/uniprotkb/Q9LZ59" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZ59", "locus": {} } ], "crossref": [ { "id": "831780", "url": "https://www.ncbi.nlm.nih.gov/gene/831780", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020472", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020472", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G02430", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02430", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EIQECEV", "url": "https://omabrowser.org/oma/group/EIQECEV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14221", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14221", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14221:SF41", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14221:SF41", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G02430", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G02430", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZ59", "url": "https://www.uniprot.org/uniprotkb/Q9LZ59", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ59-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ59-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MANRGGENGKLDRKKTMTMNWAGLGEFEDDDDHFFDSSNRISTVVPSDLASSSDEEEGEFDDCRISFSSNVSSSSRAAPAPDMSPDYDIWMSAPGSITERRRRLLNGMGLESKKTRLGAISIQRVSEPVAATGECSGSRVAEVKVEESDHNSPVNQRVRRSPSMSVLLVRSRSDSDIEASSAEKQRKEEMLGKTSKSRLTRTASAIGAPCARICPYFTQTQASPPDAPNGHHQSQGQRSGPLLSSVVSNTRFSAFFLIKNLDTGKEFIVKEYGENGMWNRLSDLQTGKQLTMEEFEKSVGYSSVVKDLMRRENANSTMDFRKFNSYVSKSLRVSKKRGAALLKNIKDVAHSMSSSKVSEKEKDSTGSGTSSPKVAEKNNEQANQWVKVRHSGKSHKDLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAEDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLDGTELVQKFRGFKNMNSQMTASYTVDAKHIVCASEDSQVYVWKHEEPRLGITGRKTVTMCTSYETFPCKDVSVAVPWNGVVKGEPPSTQHQSKRNPKKPSTTTTTPENTTTGKKSGLPPLPKKNNDGTADGATEQHQEDDPATHISHNESENNTGESIKHGDSPSISISSRISSWSWFDSSGSHGTHSVQPTAWGMVIVTATIKGQIRTYQNFGLPRRVGRQGSLF", "length": 905, "header": "tr|Q9LZ59-1|Q9LZ59_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZ59-1" }, "isoforms": [ { "isoform_ac": "Q9LZ59-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ59/entry#Q9LZ59-1", "sequence": { "sequence": "MANRGGENGKLDRKKTMTMNWAGLGEFEDDDDHFFDSSNRISTVVPSDLASSSDEEEGEFDDCRISFSSNVSSSSRAAPAPDMSPDYDIWMSAPGSITERRRRLLNGMGLESKKTRLGAISIQRVSEPVAATGECSGSRVAEVKVEESDHNSPVNQRVRRSPSMSVLLVRSRSDSDIEASSAEKQRKEEMLGKTSKSRLTRTASAIGAPCARICPYFTQTQASPPDAPNGHHQSQGQRSGPLLSSVVSNTRFSAFFLIKNLDTGKEFIVKEYGENGMWNRLSDLQTGKQLTMEEFEKSVGYSSVVKDLMRRENANSTMDFRKFNSYVSKSLRVSKKRGAALLKNIKDVAHSMSSSKVSEKEKDSTGSGTSSPKVAEKNNEQANQWVKVRHSGKSHKDLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAEDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLDGTELVQKFRGFKNMNSQMTASYTVDAKHIVCASEDSQVYVWKHEEPRLGITGRKTVTMCTSYETFPCKDVSVAVPWNGVVKGEPPSTQHQSKRNPKKPSTTTTTPENTTTGKKSGLPPLPKKNNDGTADGATEQHQEDDPATHISHNESENNTGESIKHGDSPSISISSRISSWSWFDSSGSHGTHSVQPTAWGMVIVTATIKGQIRTYQNFGLPRRVGRQGSLF", "length": 905, "header": "tr|Q9LZ59-1|Q9LZ59_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZ59-1" }, "locus": { "chromosome": "5", "start_pos": 526433, "end_pos": 529982, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02430.1", "url": "https://www.ensemblgenomes.org/id/AT5G02430.1" }, { "database": "Ensembl Peptide", "id": "AT5G02430.1", "url": "https://www.ensemblgenomes.org/id/AT5G02430.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 152, "end_pos": 152, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZ59", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZ59" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser152" }, { "start_pos": 161, "end_pos": 161, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { 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Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ83", "url": "https://www.uniprot.org/uniprotkb/Q9LZ83" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9LZ83", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZ83" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. 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"Q9LZ89", "url": "https://www.uniprot.org/uniprotkb/Q9LZ89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZ89-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ89-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYSNSVGEFREGEIDGKPFLIYTLLSQTESPSSGEAAVDSDGGDGRLSLEPRILCPTLRLKVKKLKPYTRDSNRSFFPMVVSPHFPTIQSGHEQPEYMLHSDSFHQDCIYFPYVIKISRHHHRISYTSSLPSGKWSCGVCRQMVDNDYGAYSCNKCDDYFVHSRCALRSDLWDGIELEGVPEEPEIVVEPFITISDGIILHFSHGHHLKLKISRVYDEKKVCQACILPIYEGSYYSCMDECDFILHEACANAPCKKHHALRPHPLTLTVITSEYEGNVGRFCCNACQRESCGFVYEDLGAKIGVLPYHTRQGINMTSISSNFMRRKRQMIIQSGVMHAKEEY", "length": 342, "header": "tr|Q9LZ89-1|Q9LZ89_ARATH Isoform 1 of DC1 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZ89-1" }, "isoforms": [ { "isoform_ac": "Q9LZ89-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ89/entry#Q9LZ89-1", "sequence": { "sequence": "MYSNSVGEFREGEIDGKPFLIYTLLSQTESPSSGEAAVDSDGGDGRLSLEPRILCPTLRLKVKKLKPYTRDSNRSFFPMVVSPHFPTIQSGHEQPEYMLHSDSFHQDCIYFPYVIKISRHHHRISYTSSLPSGKWSCGVCRQMVDNDYGAYSCNKCDDYFVHSRCALRSDLWDGIELEGVPEEPEIVVEPFITISDGIILHFSHGHHLKLKISRVYDEKKVCQACILPIYEGSYYSCMDECDFILHEACANAPCKKHHALRPHPLTLTVITSEYEGNVGRFCCNACQRESCGFVYEDLGAKIGVLPYHTRQGINMTSISSNFMRRKRQMIIQSGVMHAKEEY", "length": 342, "header": "tr|Q9LZ89-1|Q9LZ89_ARATH Isoform 1 of DC1 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZ89-1" }, "locus": { "chromosome": "5", "start_pos": 500626, "end_pos": 502329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G02360.1", "url": "https://www.ensemblgenomes.org/id/AT5G02360.1" }, { "database": "Ensembl Peptide", "id": "AT5G02360.1", "url": "https://www.ensemblgenomes.org/id/AT5G02360.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant 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"evidence": [ { "database": "UniProtKB", "id": "Q9LZ89", "url": "https://www.uniprot.org/uniprotkb/Q9LZ89" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G02360", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02360", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZ89", "url": "https://www.uniprot.org/uniprotkb/Q9LZ89" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 73, "end_pos": 75, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": 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"uniprot_ac": "Q9LZ90", "uniprot_id": "Q9LZ90_ARATH", "mass": { "chemical_mass": 75278.0, "monoisotopic_mass": 75278.0 }, "refseq": {}, "gene_names": [ { "name": "T1E22.110", "type": "synonym", "evidence": [ { "id": "Q9LZ90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90" } ] }, { "name": "T1E22_110", "type": "synonym", "evidence": [ { "id": "Q9LZ90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "Q9LZ90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZ90", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90", "locus": {} } ], "crossref": [ { "id": "AT5G02350", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G02350", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "831920", "url": "https://www.ncbi.nlm.nih.gov/gene/831920", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G02350", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G02350", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DENIICQ", "url": "https://omabrowser.org/oma/group/DENIICQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", 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"MNSNLVGVFREREIDGKPFHTYTLSSQTDTTTPSSYGETAIDGDDHLSLQQPLFLCPSLRLRVYGENNSYTEFLPYNTSPHFPSITGVDQQVQHLLDSDSQQVHDLLHSDNSHDDDGDEICKLPVVPIYWCNSKKDEYLQFTCGACQLSKIGTDYYICLRSDQMFHKECVESPLEIKHPSYPFLSLKLYHNFSENVNCICCDLALFSMLYHSSTYKLSMHPVCAMKPIPILIDHPKRHPHLLTFFPKQASLLCDVCGLVKESFPTYVCVRCIFVAHRDCIYFPYVIKICRHQHRISFISSLPSGKWSCGVCRQKVNNNCGAYTCNKCRHYFVHTRCALREDVWNGKDLEGVPEEPEIILEPFETIADGIILHFSHGHHLKLENSRVYDENIICQACILPIYEGNYYSCMDQCDFVLHEACANASRKKDHALHGHPLTLKVQGEDSFFCSACCRQSCGYAYGVGSYQIDFRCASVSEPFEYQGHEHPLFLALDRQQERKATCQICQRKIAFLRKLNCIECDYVLCFICATLPYEAKYKHDKHFLTFREGKKGSDQLDWCEVCERNIVYSRKDGFYACDDCCTTLHVRCLLGEDMYMSKPGHTIMNNKREVHILPNNTRSRPFCHHHDEDRCPYKVIFKWQDMTFCSYRCLIK", "length": 651, "header": "tr|Q9LZ90-1|Q9LZ90_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZ90-1" }, "isoforms": [ { "isoform_ac": "Q9LZ90-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZ90/entry#Q9LZ90-1", "sequence": { "sequence": 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"https://www.ensemblgenomes.org/id/AT5G02350.1" }, { "database": "Ensembl Peptide", "id": "AT5G02350.1", "url": "https://www.ensemblgenomes.org/id/AT5G02350.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, 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"MGCVSSKLGKKKLIREIRVNNGGDHIVSLTSTTYGHLDLDERAETSPKSLEVTKGEVFESEIIPRRSIKRDDPEIINTWELMEDLEDSMHVSNPQKISPKSRGIFGKSWKTPVKSVVESPKRGSSKRFGGKENNSRGVSPNQILKPKNILETPKRGVMRLSFPLKSEESSVTVTQRRKSYSPMFDPDLVASYERELSQEKEQIKMVISPVVHESRKTEKTERILEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTKHVKIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARLGGSCCRGCGGMRFMMCVVCNGSCKVREEEKKSMVKCLKCNENGLVLCPICS", "length": 384, "header": "tr|Q9LZC2-1|Q9LZC2_ARATH Isoform 1 of Glutaredoxin family protein OS=Arabidopsis thaliana OX=3702 GN=MED24.17 PE=1 SV=1 CANONICAL=Q9LZC2-1" }, "isoforms": [ { "isoform_ac": "Q9LZC2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZC2/entry#Q9LZC2-1", "sequence": { "sequence": 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"UniProtKB", "id": "Q9LZC2", "url": "https://www.uniprot.org/uniprotkb/Q9LZC2" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9LZC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZC2" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZE2-1", "uniprot_ac": "Q9LZE2", "uniprot_id": "Q9LZE2_ARATH", "mass": { "chemical_mass": 69869.0, "monoisotopic_mass": 69869.0 }, "refseq": { "ac": "NP_195965", "name": "Transducin/WD40 repeat-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195965" }, "gene_names": [ { "name": "F12E4.210", "type": "synonym", "evidence": [ { "id": "NP_195965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195965" }, { "id": "Q9LZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ] }, { "name": "F12E4_210", "type": "synonym", "evidence": [ { "id": "NP_195965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195965" }, { "id": "Q9LZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ] } ], "protein_names": [ { "name": "Transducin/WD40 repeat-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_195965", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195965" }, { "id": "Q9LZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2", "locus": {} } ], "crossref": [ { "id": "cd16450", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16450", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "831835", "url": "https://www.ncbi.nlm.nih.gov/gene/831835", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037381", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037381", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G03450", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G03450", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CLESWEM", "url": "https://omabrowser.org/oma/group/CLESWEM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16047", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16047", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16047:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16047:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23419", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23419", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_195965", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195965", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G03450", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G03450", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZE2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPRRSYPFSGHGGTIARFIEFGEAFGHYGEEEDEEEEDEEEAYVDYGEVQEEDEEEEEEEDSERQTREYIDVLDSPVRVSQNESEGIENQNRSQGVCSSSSGSQEDVEWKQGDTEGLSCSICMEVWTSGGQHQVCCLPCGHLYGYSCINKWFQQRRSGGKCPLCNKICSLRDVRKIYASRVAAVDDEAHKRILFLEAKLRSIEQKTASWSNKEVQWKITEAELRLEVTKLKKKIANMESTTKGSQSQSNVASQEKYIPAHNIYQEHHGQSPSCSFRHQGDLLINGGRIFDIDGGRQILLYARRLSGVGGTFVLTQMSLHSPCEIDDILLPRTTRAIKDLHLSPHNNGLAVFGSLGKKLSVISLESHNTVLSYDLPAAPWSCSWDLKSSHHIYAGLQNGMVLIFDMRQTTGPFASMTGLTTNPVHTVHHLSGNSTPTSDVRTLLSASSIGLCQWNISGSEGSPSLVSETGNPGVCISSSYCPRSNHIVASYRPRVGSSDDTVPTQPSLTQTGVSNSNSNGVDGFHVCHKRRGVDSYYQKLSSTQAIVDPIRLPRTAIIDFGGERKQLFASCDESTRELILQDPSTFTISQRLPLSSHLPLQDVKYCHVNGSDLLGLLTDDRLQILRNESP", "length": 630, "header": "tr|Q9LZE2-1|Q9LZE2_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZE2-1" }, "isoforms": [ { "isoform_ac": "Q9LZE2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2/entry#Q9LZE2-1", "sequence": { "sequence": "MPPRRSYPFSGHGGTIARFIEFGEAFGHYGEEEDEEEEDEEEAYVDYGEVQEEDEEEEEEEDSERQTREYIDVLDSPVRVSQNESEGIENQNRSQGVCSSSSGSQEDVEWKQGDTEGLSCSICMEVWTSGGQHQVCCLPCGHLYGYSCINKWFQQRRSGGKCPLCNKICSLRDVRKIYASRVAAVDDEAHKRILFLEAKLRSIEQKTASWSNKEVQWKITEAELRLEVTKLKKKIANMESTTKGSQSQSNVASQEKYIPAHNIYQEHHGQSPSCSFRHQGDLLINGGRIFDIDGGRQILLYARRLSGVGGTFVLTQMSLHSPCEIDDILLPRTTRAIKDLHLSPHNNGLAVFGSLGKKLSVISLESHNTVLSYDLPAAPWSCSWDLKSSHHIYAGLQNGMVLIFDMRQTTGPFASMTGLTTNPVHTVHHLSGNSTPTSDVRTLLSASSIGLCQWNISGSEGSPSLVSETGNPGVCISSSYCPRSNHIVASYRPRVGSSDDTVPTQPSLTQTGVSNSNSNGVDGFHVCHKRRGVDSYYQKLSSTQAIVDPIRLPRTAIIDFGGERKQLFASCDESTRELILQDPSTFTISQRLPLSSHLPLQDVKYCHVNGSDLLGLLTDDRLQILRNESP", "length": 630, "header": "tr|Q9LZE2-1|Q9LZE2_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZE2-1" }, "locus": { "chromosome": "5", "start_pos": 858735, "end_pos": 862345, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G03450.1", "url": "https://www.ensemblgenomes.org/id/AT5G03450.1" }, { "database": "Ensembl Peptide", "id": "AT5G03450.1", "url": "https://www.ensemblgenomes.org/id/AT5G03450.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G03450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G03450", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A1A6-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "Rfwd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSDLVPAVVAHEAMDCGLQVPLDGTLEQAAPTEVISHGAPLLQPPPSDLVSSQGEALVQPAPADVVSSQGGLPTLQPVPPASIDLTEEVQPAEENMEIVDPGTSEERSEGSGTNGAVGAAPSVSMNYFISGLQRLHTMLELLRPSSSQSDHSAGGPIRRRRRTGFVSRARTGGSQRLNNARLRTFFQVSRSQPYPVASAHGSEARTPPSGTDSDSDSSAENEEAAARAEEPEAAVPEQGVISTDQEAASVTGGDASPKKQSPQKPIVLPTVEDEEGETCTICLEQWTSAGDHRLSALRCGHLFGYRCIFKWLKGQTRKCPQCNKKAKHSDIVVLYARSLRALDTTEQERMKSDLLSEQALRKQAELESAQCRLQLQVLMDKCTKLNSRVQDLEKLMVRHQGPAGQQCSGSQALCGSCLPSSQSQRKYSSEKTFTVSQTGNCRIMAYCDGLSCLVASQPSPQASFLPGFGVKMLSTANMRSSQYIPMHSKQIRGLAFSNQSKGLLLSASLDNTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYIYAGLANGSILIYDLRNTNTYVQELVPQKARCPLVSLSYLPRAAVTAFPYGGVLAGTLENASFWELKTDFCHKPHVLSLEPGGFVDFQTESSTRHCLVTYRPDKSHNTVRTVLLEMSYRLDDAGEPVCSCLPVQTFLGGPTCKLLTKSAIFQSPENDGSVLVCTADEASQSALVWNAGSGSLLQNLKTDEPVLDICPFETNQNSYLATLTEKIVHIYKWE", "length": 765 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZVL5-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "RFWD3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAQEEMEVDLQPVVNYSLENQGTLPAEPAAHTALSSQAPVLSSGGSSTIVLSDDEEVVTVSTADATREAAADPDQQANPPSALIGLLRLQGASDPHQLLPGPQVAQRPRVRRARRQPRVGGSQRTVSARAALDSYFQISRTQEPAAISGSHLEPSHTMGSSQEHRLQITELQSSDSDSSTSEEEEEVETAAPLPPAAQQTPAAASSVSSQDQAELPQTLPQAPAEHGNREDEELEAQQKQRTPPKKQETPIPAAALEEEEGDTCAICFEPWTNAGDHRLSALRCGHLFGYTCIDRWLKGQAGKCPQCNKKAKRSDIVVLYARTLKALDTSEQERMKSSLEKEQKLRRQAELESAQSRLQLQVLTDECSKLRKQVQELKALVAQHNVSTSKQPGSSRTCFPGGLPSSQSQRKYHLEKVFVVSQAGNCRVMAYCDSLSCLVVSQPSPQSTFIPGCGVKMMSVANLKSSQYIPIHSKQIRGLAFGSRADGLLLSAALDNTLKLTSLATNTVVQTYNTGRPVWSCCWCLDDTNYIYAGLVNGSIMIYDLRDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNSYRPHHLLLEPGGCIDIRAEATTRHCLATYRPSKSNPCVRCVLMELTCSPLTEASEDVVCSSNPVQTFSAGPTCKLLTKNAIFQSPEEDGSIFVCAGDEASNSAMLWDAGSGSLLQKLQADLPVLDICPVEVNQTHLLATLTEKAVKLYKWQ", "length": 752 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MAV6-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "RFWD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAHEAMEYDLQVQLDHGAAEQPAPAEVVSSQGGPPLLQPPHTEEVSSQEGPPMLHPVLAEVVSIEGGPPLLQPIPEELINSPERVPLLPPIPQIPIDLEEVELSETETVGNLNPGVLEEFRPRSGANHTPQVTSLDSMNSFISGLQRLHGMLEFLRPTSDRRVGPVRARRSRRSSASRRARAGGSQRTNSARLRAPLDAFFQASRTQPHSSTTSYDSETRNLVSDDLQVSGSSDSDSDSSTEFEEGVAQAEEPEAVVLEEELEDTSTDQEVICAGGEDTVPKQQSPQKSNPSLTSASVDEEEGDTCTICLEQWTNAGDHRLSTLRCGHLFGYKCISKWLRGQTRKCPQCNKKAKQSDIVVLYARTLRALDTSEQELMKSSLLKEQKLRKKAELDSAQCRLQLQALTDKCSRLQSRVQDLQKLIGQDKISQQPGGSQPHFLSGLPTSQSQQKYHFQKTFTVSQTGNCRVMTYCDALSCLVVSQPSPQSAFLPGFGVKMLSTANMKSSQYIPMHGKQIRGLAFSSRSKGLLLSASLDSTIKLTSLETNTVVQTYNAGRPVWSCCWCLDENNYIYAGLVNGSILLYDLRNTSSHVQELVPQRARCPLVSLSYVPRAASAAFPYGGVLAGALENASFWELKMGFTHWPHVLPMEPGGCVDFQVESSTRHCLVTYRPDKNHNNLRSVLMEMSYKLDNAGEPICSCHPVQTFFGGPSCKLLTKNAIFQNPENNGSILVCIGDEASKSALLWDAGSGSLLQDLQADQPVLDICPFDVNHNSYLATLTEKTVHVYRWE", "length": 790 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1S439-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "RFWD3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHEAMEYELQVQLDHHAAEQSAPAEVVSSQGGPLLPQLPPDQVVSSQEGPPVFPPAPADVVSSQGGPPLLQPPPDEVVSSQGGLPSLQPALQVSADVTEEVALSGEESVENIRPAASEEHRRGSGAPHTAQVSSLDSMNTFISGLQRLHGMLEFLRPHSDHSVGPVRARRRRSSASHRARAGGSQRTSGGRSRAPLDAYFQVSRTQPHLPETSYDSETRNPASEDLQVSDSSDSDSDSSTEHEEGVVQAEEPGAVVLEEQLGGISAQEVTRISGGKTLSKQQSPQKSSPLLPSVDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYKCISKWLKGQTRKCPQCNKKAKHSDIVVLYARNLRALDTSEQELMKSSLQKEQMLREKAELESAKCRLQLQVLTDECTKLQRRVQDLEELTVQHQDHISQQSRCLPSSQSKRKYHFQKTFTVSPTGNCRIMKYCDSLSCLVVSQPSPQASFIPGFGVKMLSTANMTSSQYIPMHGKQIRGLAFSSRSKGLLLSASLDSTIKLTSLETNTVVQTYNAGRPVWSCCWCLDENNYIYAGLVNGSILAYDLRNTSSHIQELVLPKARCPLVSLSYIPRAASAAFPYGGVLAGTLENASFWELKVGFTHWPHVLPIEPGGCVDFQTESNTRHCLVTYRPDKNHNTLRSVLMEMSYALNDAGERVCSCHPVQTFLGGPTCKLLTKSAIFQNPENDGSILVCTGDEASNSALLWDAGSGSLLQDLQAHQPVMDICPFEVNHNSYLATLTEKMVHIYKWE", "length": 781 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q6PCD5-1", "protein_name": "E3 ubiquitin-protein ligase RFWD3", "gene_name": "RFWD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEVISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSMTNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDAYFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILEEQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE", "length": 774 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CIK8-1", "protein_name": "E3 ubiquitin-protein ligase RFWD3", "gene_name": "Rfwd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEVAVGQASDLVPSEMDHEVIYSHLQGPLEGTIEPATPTEVVSNGAPLQPAPAELANSQGGAHVQPAPAEVVSSQDGLPTLQPLPPASIDLTEEVQPSEENMEVVNPGTSEEPSQGSGANPTAGAARSVSMNNFISGLQRLHNMLELLRPPPADHSVGPIRTRRRMAPILRARAGESQRQDNGRYVPHTPLYAYFQVSRSQPYPLPAAHDSETRNPPSGTDSDSDGSAEDEEVVVQAEEPEANIPEQGVIATDQEATSVTGDDAVPKESPQKPNMLSAMEDEEGETCTICLEQWTNAGDHRISALRCGHLFGFRCISKWLKGQTRKCPQCNKKAKHSDIVVIYARSLRALDTSEQERMKSDLLNEQMLRKQAELESAQCRLQLQVLIDKCTKLNSRVQDLEKFVVRHQNSAAQQCSRSKALCGKCLSSSQSPGKYSSEKTFTISQTGKCRILAYCDGLSCLVASQPSPQASFLPGFGVKMLSTANMKSSQYIPMHNKQIRGLSFSSQSKGLLLSASLDCTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYVYAGLASGSILIYDLRNTNTYIQELVPQKARCPLVSLSYLPKAAVAAFPYGGVLAGTLENASFWELKSDFSHKPHVLSLEPGGFVDFQTESSTRHCLVTYRPDKSHNTVRTVLLEMSYKLDDAGEPVCSCLPVQTFLGGPTCKLLTKSAIFQSPENNGNVLVCTGDEASQSTLLWNAGSGLLLQNLKAGEPVLDICPFETNQNSYLATLTEKTVHMYKWE", "length": 774 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WE22-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "rfwd3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDMEVVMVSESGSSTEEEENDVAASVPEDRSRLPLRRAPRRRQIISQRPHAERVRRIQTLLQNTHNPPDTHNPPDTRTDPEPASSDSADQSRVQSTAETSSPAGPSVPAAAEAPAVELKTEVEASSDSSGSAAASPAGAADEADTEGESCSICFEPWTTAGEHRLAALRCGHLFGYVCISRWLTGGGNKCPQCNKPAKKTQIIFLYARRLKALDNTEEVRLKSRLELEQGSRRMEQLEVAQCRQQLQLMVDENTRLRKEVEELRRWKAQASAGSSQAASLSSSQRQDSGHYVFSKAVLVSQTGGSRVLAHCEPLGCLLASQPSPQATLMPGFGVKKISTATLKASQYVHIHSKQIRGLAFSQQQDGLLLSAALDNTIKLTSLMTNTVVQAYNTGRPVWSCCWCHDNNNYIYAGLSNGSVLVYDTRDTSTHVQELRPLRSSCPVVSLSYIPHSSTSSSFPCGGVIAGTLEGGCFWERHNDNTHTPHILPLESGNCTHIQAEAESRHCLVTYRPGRLNPSLRCVLMELSRTPQVDLQSSVCSCSPVQTFSAGSSCKLLTKNCVFRSPAGGGAALVCAGDEATNSTMVWDAGTGALLQKMPADLPVLDICPFEANQSSFLASLTEKMIKVYKWE", "length": 632 }, "evidence": [ { "id": "Q9LZE2", "url": "https://omabrowser.org/oma/group/Q9LZE2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "pmid": "" }, { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE2", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 433, "end_pos": 435, "annotation": "n_glycosylation_sequon" }, { "start_pos": 455, "end_pos": 457, "annotation": "n_glycosylation_sequon" }, { "start_pos": 609, "end_pos": 611, "annotation": "n_glycosylation_sequon" }, { "start_pos": 627, "end_pos": 629, "annotation": "n_glycosylation_sequon" }, { "start_pos": 83, "end_pos": 85, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE2" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 120, "end_pos": 166, "start_aa": "Cys", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 433, "end_pos": 435 }, { "start_pos": 455, "end_pos": 457 }, { "start_pos": 609, "end_pos": 611 }, { "start_pos": 627, "end_pos": 629 }, { "start_pos": 83, "end_pos": 85 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZE9-1", "uniprot_ac": "Q9LZE9", "uniprot_id": "Q9LZE9_ARATH", "mass": { "chemical_mass": 20398.0, "monoisotopic_mass": 20398.0 }, "refseq": {}, "gene_names": [ { "name": "F12E4.140", "type": "synonym", "evidence": [ { "id": "Q9LZE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ] }, { "name": "F12E4_140", "type": "synonym", "evidence": [ { "id": "Q9LZE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LZE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZE9", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9", "locus": {} } ], "crossref": [ { "id": "AT5G03400", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G03400", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "831849", "url": "https://www.ncbi.nlm.nih.gov/gene/831849", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT5G03400", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G03400", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AT5G03400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G03400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZE9", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNIDSDYGYKKWKMKRRGEEDSELERALMIIDEEMEIWAKKKEVKDEVDDECLFVSALTTHCGESGNKIQEAKRLEFVKRTVAMKNESEYWFKKWEMKKQSEEDSDVEIAQMMSEEEIEIWAKEKEAEAEGEADEGKVWGLKEKTDYWEERKVHFVTEAKYWEIMYGYLS", "length": 170, "header": "tr|Q9LZE9-1|Q9LZE9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZE9-1" }, "isoforms": [ { "isoform_ac": "Q9LZE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9/entry#Q9LZE9-1", "sequence": { "sequence": "MNIDSDYGYKKWKMKRRGEEDSELERALMIIDEEMEIWAKKKEVKDEVDDECLFVSALTTHCGESGNKIQEAKRLEFVKRTVAMKNESEYWFKKWEMKKQSEEDSDVEIAQMMSEEEIEIWAKEKEAEAEGEADEGKVWGLKEKTDYWEERKVHFVTEAKYWEIMYGYLS", "length": 170, "header": "tr|Q9LZE9-1|Q9LZE9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZE9-1" }, "locus": { "chromosome": "5", "start_pos": 837919, "end_pos": 839202, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G03400.1", "url": "https://www.ensemblgenomes.org/id/AT5G03400.1" }, { "database": "Ensembl Peptide", "id": "AT5G03400.1", "url": "https://www.ensemblgenomes.org/id/AT5G03400.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE9", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE9", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G03400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G03400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZE9", "url": "https://www.uniprot.org/uniprotkb/Q9LZE9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 86, "end_pos": 88, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 86, "end_pos": 88 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZF9", "url": "https://www.uniprot.org/uniprotkb/Q9LZF9" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LZF9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZF9" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": 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"url": "https://www.ensemblgenomes.org/id/AT3G62780.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZI7", "url": "https://www.uniprot.org/uniprotkb/Q9LZI7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZI7", "url": "https://www.uniprot.org/uniprotkb/Q9LZI7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G62780", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62780", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9LZI7", "url": "https://www.uniprot.org/uniprotkb/Q9LZI7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 9, "end_pos": 11, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZI7" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 113, "start_aa": "Met", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 9, "end_pos": 11 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZJ2-1", "uniprot_ac": "Q9LZJ2", "uniprot_id": "Q9LZJ2_ARATH", "mass": { "chemical_mass": 34732.0, "monoisotopic_mass": 34732.0 }, "refseq": { "ac": "NP_191832", "name": "desiccation-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191832" }, "gene_names": [], "protein_names": [ { "name": "Desiccation-like protein", "type": "synonym", "evidence": [ { "id": "Q9LZJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2/entry#names_and_taxonomy" } ] }, { "name": "desiccation-like protein", "type": "synonym", "evidence": [ { "id": "NP_191832", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191832" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZJ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2", "locus": {} } ], "crossref": [ { "id": "AT3G62730", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G62730", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825448", "url": "https://www.ncbi.nlm.nih.gov/gene/825448", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR052965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G62730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MNGYVGM", "url": "https://omabrowser.org/oma/group/MNGYVGM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LR66", "url": "https://www.orthodb.org/?gene=A0A1I9LR66", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LZJ2", "url": "https://www.orthodb.org/?gene=Q9LZJ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31694", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31694", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31694:SF26", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31694:SF26", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13668", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13668", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191832", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191832", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G62730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G62730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LR66", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LR66-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR66-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZJ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZJ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFKLCLVLVLVIAVDANPAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHLRAITDMTGGIPRPLINLTRENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLVAGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCVPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARMFLDEGCYGEYCVVCSHDN", "length": 317, "header": "tr|Q9LZJ2-1|Q9LZJ2_ARATH Isoform 1 of Desiccation-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZJ2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LR66-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2/entry#A0A1I9LR66-1", "sequence": { "sequence": "MFKLCLVLVLVIAVDANPAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHLRAITDMTGGIPRPLINLTRENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKVINYDCVYIFSQEKSNMVLLLFTDLYLKILATQKPYYIICIKTKSS", "length": 224, "header": "tr|A0A1I9LR66-1|A0A1I9LR66_ARATH Computationally mapped isoform of Desiccation-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZJ2-1" }, "locus": { "chromosome": "3", "start_pos": 23208674, "end_pos": 23209487, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G62730.2", "url": "https://www.ensemblgenomes.org/id/AT3G62730.2" }, { "database": "Ensembl Peptide", "id": "AT3G62730.2", "url": "https://www.ensemblgenomes.org/id/AT3G62730.2" } ] } }, { "isoform_ac": "Q9LZJ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2/entry#Q9LZJ2-1", "sequence": { "sequence": "MFKLCLVLVLVIAVDANPAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHLRAITDMTGGIPRPLINLTRENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLVAGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCVPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARMFLDEGCYGEYCVVCSHDN", "length": 317, "header": "tr|Q9LZJ2-1|Q9LZJ2_ARATH Isoform 1 of Desiccation-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZJ2-1" }, "locus": { "chromosome": "3", "start_pos": 23207854, "end_pos": 23209533, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G62730.1", "url": "https://www.ensemblgenomes.org/id/AT3G62730.1" }, { "database": "Ensembl Peptide", "id": "AT3G62730.1", "url": "https://www.ensemblgenomes.org/id/AT3G62730.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 267, "end_pos": 267, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZJ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZJ2" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Thr267" }, { "start_pos": 278, "end_pos": 278, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZJ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZJ2" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Thr278" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZJ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZJ2" } ], 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"IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055294", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055294", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G62430", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62430", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HHEYREY", "url": "https://omabrowser.org/oma/group/HHEYREY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", 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"https://www.uniprot.org/uniprotkb/Q9LZP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZP7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZP7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRISNLPDGVIYRVISLLSTKEATCLKYTSKNWLNLVTIIPIAVFVDSSASAISASFKDFADRIMLARLASHRIRRFSLKLQSLNFAQYKTVNDCLRNVLECGVLDLELDINVRGDYSLPSEIFTCKSVVKMKLGSGFVIDILPKNAWLPALKTLLLDTVRFEFDNTAGCSFTKLISACPVLEELVIDGHNCEDWKWSRRVSSQILKRLTIRRKEWVHDGSSFEPISLDIPSLEYFKYFDTLRDSYPVVKLNSLVEAKLELPSLYIGDTYNVRNLIKGLKNVQILRLGAVDTMHLFWVFREAVPVFENLFHLSVSTHDAICWDDLRILLEKSPNLKTLTIEALHYHGYGDENSVCECLDGYSFLLSCPIEILKITEFGGEIEEMEQVEYVLENLLCLVLLEIHVKTKKIDRKLQILADLLMLPRASSKCKVQVKFV", "length": 437, "header": "sp|Q9LZP7-1|FB216_ARATH Isoform 1 of F-box protein At3g62430 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9LZP7-1" }, "isoforms": [ { "isoform_ac": "Q9LZP7-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZP7/entry#Q9LZP7-1", "sequence": { "sequence": 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Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZP7", "url": "https://www.uniprot.org/uniprotkb/Q9LZP7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZP7", "url": "https://www.uniprot.org/uniprotkb/Q9LZP7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G62430", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62430", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], 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"uniprot_ac": "Q9LZQ2", "uniprot_id": "Q9LZQ2_ARATH", "mass": { "chemical_mass": 37789.0, "monoisotopic_mass": 37789.0 }, "refseq": { "ac": "NP_191797", "name": "F-box/associated interaction domain protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191797" }, "gene_names": [], "protein_names": [ { "name": "F-box/associated interaction domain protein", "type": "synonym", "evidence": [ { "id": "NP_191797", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191797" }, { "id": "Q9LZQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZQ2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZQ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZQ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZQ2", "locus": {} } ], "crossref": [ { "id": "AT3G62380", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G62380", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825411", "url": "https://www.ncbi.nlm.nih.gov/gene/825411", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G62380", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62380", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HINIFIH", "url": "https://omabrowser.org/oma/group/HINIFIH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191797", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G62380", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G62380", "database": "TAIR", "categories": [ "Protein", 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"ath:AT3G62330", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62330", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9LZQ7", "url": "https://oglcnac.org/atlas/detail/Q9LZQ7", "database": "O-GlcNAc Atlas", "categories": [ "Glycoproteomics" ] }, { "id": "AQSKSPC", "url": "https://omabrowser.org/oma/group/AQSKSPC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34210", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34210", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34210:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34210:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_191792", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191792", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G62330", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G62330", 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"AT3G62330.1", "url": "https://www.ensemblgenomes.org/id/AT3G62330.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 258, "start_aa": "Ser", "end_pos": 258, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser258", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9LZQ7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9LZQ7" } ] }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "O-GlcNAcylation", 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"https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser258" }, { "start_pos": 264, "end_pos": 264, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser264" }, { "start_pos": 269, "end_pos": 269, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser269" }, { "start_pos": 44, "end_pos": 44, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser44" }, { "start_pos": 6, "end_pos": 6, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser6" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9LZQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LZQ7" }, { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-10", "authors": "Wu Xu Na, Sanchez Rodriguez Clara, Pertl-Obermeyer Heidi, Obermeyer Gerhard, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ7" } ], "reference": [ { "type": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] 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"https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZT8", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVHRDVKSINILLDEEFKAKISDFGLSRSFQVGGDQPQVSTVVVGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKECLASENTRISRNNQNMDSGHSSDQLNVTVTFDTDVKPKAR", "length": 192, "header": "tr|Q9LZT8-1|Q9LZT8_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZT8-1" }, "isoforms": [ { "isoform_ac": "Q9LZT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8/entry#Q9LZT8-1", "sequence": { "sequence": "MVHRDVKSINILLDEEFKAKISDFGLSRSFQVGGDQPQVSTVVVGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKECLASENTRISRNNQNMDSGHSSDQLNVTVTFDTDVKPKAR", "length": 192, "header": "tr|Q9LZT8-1|Q9LZT8_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZT8-1" }, "locus": { "chromosome": "3", "start_pos": 16882182, "end_pos": 16883011, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45920.1", "url": "https://www.ensemblgenomes.org/id/AT3G45920.1" }, { "database": "Ensembl Peptide", "id": "AT3G45920.1", "url": "https://www.ensemblgenomes.org/id/AT3G45920.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 144, "end_pos": 144, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZT8" } 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} ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZT8", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G45920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9LZT8", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9LZT8", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LZT8", "url": "https://www.uniprot.org/uniprotkb/Q9LZT8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 142, "end_pos": 144, "annotation": "n_glycosylation_sequon" }, { "start_pos": 178, "end_pos": 180, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZT8", "database": "UniProtKB", "url": 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"reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZT9", "locus": {} } ], "crossref": [ { "id": "823734", "url": "https://www.ncbi.nlm.nih.gov/gene/823734", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G45910", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45910", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HVGSLCC", "url": "https://omabrowser.org/oma/group/HVGSLCC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_190177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190177", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZT9", "url": "https://www.uniprot.org/uniprotkb/Q9LZT9", "database": "UniProtKB", 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OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZT9-1" }, "locus": { "chromosome": "3", "start_pos": 16876338, "end_pos": 16877075, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45910.1", "url": "https://www.ensemblgenomes.org/id/AT3G45910.1" }, { "database": "Ensembl Peptide", "id": "AT3G45910.1", "url": "https://www.ensemblgenomes.org/id/AT3G45910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs 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"id": "Q9LZU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZU7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser458" }, { "start_pos": 616, "end_pos": 616, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZU7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser616" }, { "start_pos": 707, "end_pos": 707, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZU7" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser707" }, { "start_pos": 713, "end_pos": 713, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZU7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser713" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZU7", "url": "https://www.uniprot.org/uniprotkb/Q9LZU7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", 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"https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G60810", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825252", "url": "https://www.ncbi.nlm.nih.gov/gene/825252", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60810", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60810", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DNFTPHI", "url": "https://omabrowser.org/oma/group/DNFTPHI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4JCZ8", "url": "https://www.orthodb.org/?gene=F4JCZ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LZY2", "url": "https://www.orthodb.org/?gene=Q9LZY2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34801", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34801", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34801:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34801:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07386", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07386", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191640", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191640", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JCZ8", "url": "https://www.uniprot.org/uniprotkb/F4JCZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JCZ8-1", "url": "https://www.uniprot.org/uniprotkb/F4JCZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZY2", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZY2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASMASPTTCLYHHKCRRKLVFYARRISASIPETSYDKHPKLIGRRDIILRSSELAMIGAIFQLSGKKPDYLGVQKNERLALCPATNNCISTSENISDRVHYAPPWNYNGGRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVEYESPILGLVDDVEFLFTPGKNSKVEYRSASRKGNFDFDVNRKRIKALRQELEKKGWVSENSF", "length": 214, "header": "tr|Q9LZY2-1|Q9LZY2_ARATH Isoform 1 of DUF1499 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZY2-1" }, "isoforms": [ { "isoform_ac": "F4JCZ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2/entry#F4JCZ8-1", "sequence": { "sequence": "MASMASPTTCLYHHKCRRKLVFYARRISASIPETSYDKHPKLIGRRSSELAMIGAIFQLSGKKPDYLGVQKNERLALCPATNNCISTSENISDRVHYAPPWNYNGGRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVEYESPILGLVDDVEFLFTPGKNSKVEYRSASRKGNFDFDVNRKRIKALRQELEKKGWVSENSF", "length": 209, "header": "tr|F4JCZ8-1|F4JCZ8_ARATH Computationally mapped isoform of DUF1499 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZY2-1" }, "locus": { "chromosome": "3", "start_pos": 22470519, "end_pos": 22471906, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60810.2", "url": "https://www.ensemblgenomes.org/id/AT3G60810.2" }, { "database": "Ensembl Peptide", "id": "AT3G60810.2", "url": "https://www.ensemblgenomes.org/id/AT3G60810.2" } ] } }, { "isoform_ac": "Q9LZY2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2/entry#Q9LZY2-1", "sequence": { "sequence": "MASMASPTTCLYHHKCRRKLVFYARRISASIPETSYDKHPKLIGRRDIILRSSELAMIGAIFQLSGKKPDYLGVQKNERLALCPATNNCISTSENISDRVHYAPPWNYNGGRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVEYESPILGLVDDVEFLFTPGKNSKVEYRSASRKGNFDFDVNRKRIKALRQELEKKGWVSENSF", "length": 214, "header": "tr|Q9LZY2-1|Q9LZY2_ARATH Isoform 1 of DUF1499 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZY2-1" }, "locus": { "chromosome": "3", "start_pos": 22470519, "end_pos": 22471906, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60810.1", "url": "https://www.ensemblgenomes.org/id/AT3G60810.1" }, { "database": "Ensembl Peptide", "id": "AT3G60810.1", "url": "https://www.ensemblgenomes.org/id/AT3G60810.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZY2", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZY2", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60810", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9LZY2", "url": "https://www.uniprot.org/uniprotkb/Q9LZY2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 95, "end_pos": 97 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZY5-1", "uniprot_ac": "Q9LZY5", "uniprot_id": "Q9LZY5_ARATH", "mass": { "chemical_mass": 23833.0, "monoisotopic_mass": 23833.0 }, "refseq": { "ac": "NP_191637", "name": "hypothetical protein (DUF1442)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191637" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LZY5", "database": "UniProtKB", "url": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60780", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60780", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AIHTCGR", "url": "https://omabrowser.org/oma/group/AIHTCGR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LZY5", "url": "https://www.orthodb.org/?gene=Q9LZY5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33593", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33593", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33593:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33593:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07279", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07279", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191637", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191637", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60780", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60780", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZY5", "url": "https://www.uniprot.org/uniprotkb/Q9LZY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZY5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZY5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRLVWSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVGLAVAAIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMVVDSKRHEFVNALGLAKTSKMGAVLVCKNATLKSIPGFKWQGLLRRGTRVVRSVFLPVGRGLEIVHVGASGGGNGLRKIPSRWIKHIDPRSGEEHLFKR", "length": 218, "header": "tr|Q9LZY5-1|Q9LZY5_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZY5-1" }, "isoforms": [ { "isoform_ac": 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Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZY5", "url": "https://www.uniprot.org/uniprotkb/Q9LZY5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", 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Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60710", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60710", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ELHGYPK", "url": "https://omabrowser.org/oma/group/ELHGYPK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LZZ2", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LZZ2", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191630", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191630", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60710", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60710", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LM94", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM94-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM94-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM95", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM95", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM95-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM95-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZZ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZZ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDLISQLPNELLQEILLNLPTSESVRTSVLPTRWRNLWQSVPGLYLISRQILKFVNLRTPSDVVLEMLISCSPVLQVLSICDVGVDFLKVRSQTLRSLSLWTFIFKGENDDVSLGDDGESGLVIDTPSLEFLRIRDFPLEDFRVESVISSIKMCIDGTYAYTKLQQLPEFKNLTRLYAFLHTDYSEMLPIYLSSSPNLKSIDLELHGYPKMEEIASSPVPKCLQTSIENVKIKMTPKADQEKSRKAETEVANYILENATLLKLTLWLDDEEEDESSSVLEKILTFQNYSFVEVKIGREASKFRLGYTFDEAKHFSRRFL", "length": 320, "header": "sp|Q9LZZ2-1|FBD12_ARATH Isoform 1 of Putative FBD-associated F-box protein At3g60710 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZZ2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LM94-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2/entry#A0A1I9LM94-1", "sequence": { "sequence": "MEDLISQLPNELLQEILLNLPTSESVRTSVLPTRWRNLWQSVPGLYLISRQILKFVNLRLEYVILDDFDSCESFYLPHLEVMHLGFRSTPSDVVLEMLISCSPVLQVLSICDVGVDFLKVRSQTLRSLSLWTFIFKGENDDVSLGDDGESGLVIDTPSLEFLRIRDFPLEDFRVESVISSIKMCIDVRFYGEMTFQTRKLCTSFLLSSRRSQILASLAIL", "length": 220, "header": "tr|A0A1I9LM94-1|A0A1I9LM94_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZZ2-1" }, "locus": { "chromosome": "3", "start_pos": 22440198, "end_pos": 22441507, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60710.2", "url": "https://www.ensemblgenomes.org/id/AT3G60710.2" }, { "database": "Ensembl Peptide", "id": "AT3G60710.2", "url": "https://www.ensemblgenomes.org/id/AT3G60710.2" } ] } }, { "isoform_ac": "A0A1I9LM95-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2/entry#A0A1I9LM95-1", "sequence": { "sequence": "MEDLISQLPNELLQEILLNLPTSESVRTSVLPTRWRNLWQSVPGLYLISRQILKFVNLRLEYVILDDFDSCESFYLPHLEVMHLGFRSTPSDVVLEMLISCSPVLQVLSICDVGVDFLKVRSQTLRSLSLWTFIFKGENDDVSLGDDGESGLVIDTPSLEFLRIRDFPLEDFRVESVISSIKMCIDVRFYGEMTFQTRKLCTSFLLSSRREPMLTQNCNNCLNSRT", "length": 226, "header": "tr|A0A1I9LM95-1|A0A1I9LM95_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZZ2-1" }, "locus": { "chromosome": "3", "start_pos": 22440198, "end_pos": 22441507, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60710.3", "url": "https://www.ensemblgenomes.org/id/AT3G60710.3" }, { "database": "Ensembl Peptide", "id": "AT3G60710.3", "url": "https://www.ensemblgenomes.org/id/AT3G60710.3" } ] } }, { "isoform_ac": "Q9LZZ2-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2/entry#Q9LZZ2-1", "sequence": { "sequence": "MEDLISQLPNELLQEILLNLPTSESVRTSVLPTRWRNLWQSVPGLYLISRQILKFVNLRTPSDVVLEMLISCSPVLQVLSICDVGVDFLKVRSQTLRSLSLWTFIFKGENDDVSLGDDGESGLVIDTPSLEFLRIRDFPLEDFRVESVISSIKMCIDGTYAYTKLQQLPEFKNLTRLYAFLHTDYSEMLPIYLSSSPNLKSIDLELHGYPKMEEIASSPVPKCLQTSIENVKIKMTPKADQEKSRKAETEVANYILENATLLKLTLWLDDEEEDESSSVLEKILTFQNYSFVEVKIGREASKFRLGYTFDEAKHFSRRFL", "length": 320, "header": "sp|Q9LZZ2-1|FBD12_ARATH Isoform 1 of Putative FBD-associated F-box protein At3g60710 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9LZZ2-1" }, "locus": { "chromosome": "3", "start_pos": 22440198, "end_pos": 22441472, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60710.1", "url": "https://www.ensemblgenomes.org/id/AT3G60710.1" }, { "database": "Ensembl Peptide", "id": "AT3G60710.1", "url": "https://www.ensemblgenomes.org/id/AT3G60710.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ2", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60710", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60710", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 258, "end_pos": 260, "annotation": "n_glycosylation_sequon" }, { "start_pos": 288, "end_pos": 290, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9LZZ2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 320, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9LZZ2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9LZZ2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LZZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ2" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 2, "end_pos": 48, "start_aa": "Glu", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 }, { "start_pos": 258, "end_pos": 260 }, { "start_pos": 288, "end_pos": 290 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9LZZ3-1", "uniprot_ac": "Q9LZZ3", "uniprot_id": "Q9LZZ3_ARATH", "mass": { "chemical_mass": 24888.0, "monoisotopic_mass": 24888.0 }, "refseq": { "ac": "NP_191629", "name": "hypothetical protein (DUF1163)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191629" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9LZZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3/entry#names_and_taxonomy" } ] }, { "name": "hypothetical protein (DUF1163)", "type": "synonym", "evidence": [ { "id": "NP_191629", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191629" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3", "locus": {} } ], "crossref": [ { "id": "825241", "url": "https://www.ncbi.nlm.nih.gov/gene/825241", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009544", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009544", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60700", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60700", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YSTIAFM", "url": "https://omabrowser.org/oma/group/YSTIAFM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9LZZ3", "url": "https://www.orthodb.org/?gene=Q9LZZ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31125:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31125:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191629", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191629", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9LZZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LZZ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLEKEAFVDKEELREEVPKKGEPAATLIFCCFSQLLVVWVTLCAVKFSCSYFLSKSITTNHVPYSTIAFMNFTVFDINTHLSAKWNLSIRVPENLPGSYICLQGDFQASLLYKNITIATSPPRSYNNLLFHWPQLLKVSGDVSEEDINGAIGKNIVNDIKERSEVRLGLRLFLPDCRENKAGTMKFACDEVKMKFESSYEQKITSTVVGYPNCLYDDH", "length": 219, "header": "tr|Q9LZZ3-1|Q9LZZ3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZZ3-1" }, "isoforms": [ { "isoform_ac": "Q9LZZ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ3/entry#Q9LZZ3-1", "sequence": { "sequence": 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"MREVETTAITAAPPQFSQMFQKLAMAVKTKTYEFFTEDDNERTDAEGFSLLDSSEDFITDQKVVVLKPDKPLLSASSPGSPIESPVNDVQTKNLGVVSVVKPNQKKLSQVRKLDTQMGLSLISSVFATASSFEASYLQLQAAHAPFVEENVKAADRALVSNLQKLSDLKQFYRNYRQSLDFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKSTSKLSKRLSSNSSLDVLLSVRVFESLLYDAFKATQKFTKILIELMEKAGWDLDLVAKSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSVDSSLRELMQHVSSNPMELLDRDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSLSTFYESFVTMASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDKKFSMSPTRAKVGFTVVPGFKIGCTVIQCQVYLTGGSKM", "length": 499, "header": "tr|Q9LZZ5-1|Q9LZZ5_ARATH Isoform 1 of DUF641 family protein (DUF641) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZZ5-1" }, "isoforms": [ { "isoform_ac": "Q9LZZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ5/entry#Q9LZZ5-1", "sequence": { "sequence": "MREVETTAITAAPPQFSQMFQKLAMAVKTKTYEFFTEDDNERTDAEGFSLLDSSEDFITDQKVVVLKPDKPLLSASSPGSPIESPVNDVQTKNLGVVSVVKPNQKKLSQVRKLDTQMGLSLISSVFATASSFEASYLQLQAAHAPFVEENVKAADRALVSNLQKLSDLKQFYRNYRQSLDFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKSTSKLSKRLSSNSSLDVLLSVRVFESLLYDAFKATQKFTKILIELMEKAGWDLDLVAKSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSVDSSLRELMQHVSSNPMELLDRDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSLSTFYESFVTMASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDKKFSMSPTRAKVGFTVVPGFKIGCTVIQCQVYLTGGSKM", "length": 499, "header": "tr|Q9LZZ5-1|Q9LZZ5_ARATH Isoform 1 of DUF641 family protein (DUF641) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LZZ5-1" }, "locus": { "chromosome": "3", "start_pos": 22429960, "end_pos": 22432106, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60680.1", "url": "https://www.ensemblgenomes.org/id/AT3G60680.1" }, { "database": "Ensembl Peptide", "id": "AT3G60680.1", "url": "https://www.ensemblgenomes.org/id/AT3G60680.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 207, "end_pos": 207, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZZ5" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr207" }, { "start_pos": 80, "end_pos": 80, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZZ5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser80" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9LZZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZZ5" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9LZZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZZ5" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9LZZ5", "url": "https://www.uniprot.org/uniprotkb/Q9LZZ5" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", 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Classification" ] }, { "id": "ath:AT5G01580", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G01580", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CQLYKGV", "url": "https://omabrowser.org/oma/group/CQLYKGV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13234:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13234:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_195778", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195778", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G01580", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G01580", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M017", "url": "https://www.uniprot.org/uniprotkb/Q9M017", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M017-1", "url": "https://www.uniprot.org/uniprotkb/Q9M017-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASYQRLCITSCTIFFCLLSLSSSQKVTLSLYYEALCPFCAEFIVNRLPKIFETGLISSIDLQLVPWGNAAIRPDGTILCQHGEAECALNAIHACAINAYPDVMKHFGYIYCTEQLVLENKLEKWADCLEMVGLSRAAVDCYINGYGNQLEQRYAEETSELYPAHRFVPWVVVNNLPLQENYQNFVMYVCNAYGSNQVPEACRILNSSVETLSRSNSSVEKLSNSPQVCYSNH", "length": 233, "header": "tr|Q9M017-1|Q9M017_ARATH Isoform 1 of Gamma interferon responsive lysosomal thiol (GILT) reductase family protein OS=Arabidopsis thaliana OX=3702 GN=OSH1 PE=3 SV=1 CANONICAL=Q9M017-1" }, "isoforms": [ { "isoform_ac": "Q9M017-1", "url": "https://www.uniprot.org/uniprotkb/Q9M017/entry#Q9M017-1", "sequence": 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K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M017", "url": "https://www.uniprot.org/uniprotkb/Q9M017" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": 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"name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195768" }, "gene_names": [ { "name": "F7A7.1", "type": "synonym", "evidence": [ { "id": "NP_195768", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195768" }, { "id": "Q9M026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M026" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "NP_195768", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195768" }, { "id": "Q9M026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M026/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M026", "url": 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Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G01480", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G01480", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF209", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF209", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_195768", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195768", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G01480", "url": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31300:SF32", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31300:SF32", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04788", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04788", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191131", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191131", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G55720", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G55720", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M050", "url": "https://www.uniprot.org/uniprotkb/Q9M050", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M050-1", "url": "https://www.uniprot.org/uniprotkb/Q9M050-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRTLCPNFDREDGLETVLEVPMPEELFCSDNNKSGAWRSVKSSLLRSPPDNSSSLATLFGGRDSQIQMLLGIVGAPSIPLPISSDQAKIDHPISNLIKNQSIESAMAKYIVKQYTAAAGGEMALDAVESMYAMGKVKMGVTEFCAAKTLNGKRKKKMVRIRNVNNNNGNGGEMGGFVLWKKGSSQWSLELVVSGCKVSAGCDGNVDWRQSPWLAHSHASNEPSGPLRRFLQGLDPKTTANLFAGSVCVGEKAVNNEECFVLKLETQPSGLKSRSKSGMETVKHTVWGCFGQRTGLLVQLEDTYLVRIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSLLRLDESLESHSKTTMEESWEIEEVGFNVKGLSSDFFLPPGDLCIKEEEETGFSFGDYTSPMLLPLKVSTTSWKIKSSKVTAIEDFGEFEG", "length": 438, "header": "tr|Q9M050-1|Q9M050_ARATH Isoform 1 of Replication factor C subunit, putative (DUF620) OS=Arabidopsis thaliana OX=3702 GN=BDR7 PE=4 SV=1 CANONICAL=Q9M050-1" }, "isoforms": [ { "isoform_ac": "Q9M050-1", "url": "https://www.uniprot.org/uniprotkb/Q9M050/entry#Q9M050-1", "sequence": { "sequence": "MRTLCPNFDREDGLETVLEVPMPEELFCSDNNKSGAWRSVKSSLLRSPPDNSSSLATLFGGRDSQIQMLLGIVGAPSIPLPISSDQAKIDHPISNLIKNQSIESAMAKYIVKQYTAAAGGEMALDAVESMYAMGKVKMGVTEFCAAKTLNGKRKKKMVRIRNVNNNNGNGGEMGGFVLWKKGSSQWSLELVVSGCKVSAGCDGNVDWRQSPWLAHSHASNEPSGPLRRFLQGLDPKTTANLFAGSVCVGEKAVNNEECFVLKLETQPSGLKSRSKSGMETVKHTVWGCFGQRTGLLVQLEDTYLVRIKTGLEDEDMVLWETTSETLIQDYKSIDGIQIAHRGKTRVSLLRLDESLESHSKTTMEESWEIEEVGFNVKGLSSDFFLPPGDLCIKEEEETGFSFGDYTSPMLLPLKVSTTSWKIKSSKVTAIEDFGEFEG", "length": 438, "header": "tr|Q9M050-1|Q9M050_ARATH Isoform 1 of Replication factor C subunit, putative (DUF620) OS=Arabidopsis thaliana OX=3702 GN=BDR7 PE=4 SV=1 CANONICAL=Q9M050-1" }, "locus": { "chromosome": "3", "start_pos": 20679664, "end_pos": 20681447, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G55720.1", "url": "https://www.ensemblgenomes.org/id/AT3G55720.1" }, { "database": "Ensembl Peptide", "id": "AT3G55720.1", "url": "https://www.ensemblgenomes.org/id/AT3G55720.1" } ] } } ], "glycosylation": [], 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M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M050", "url": "https://www.uniprot.org/uniprotkb/Q9M050" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M050", "url": "https://www.uniprot.org/uniprotkb/Q9M050" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G55720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55720", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular 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Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M053", "url": "https://www.uniprot.org/uniprotkb/Q9M053" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G55690", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55690", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M053", "url": "https://www.uniprot.org/uniprotkb/Q9M053" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M054-1", "uniprot_ac": "Q9M054", "uniprot_id": "Q9M054_ARATH", "mass": { "chemical_mass": 20858.0, "monoisotopic_mass": 20858.0 }, "refseq": { "ac": "NP_191127", "name": "Plant invertase/pectin methylesterase inhibitor superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191127" }, "gene_names": [], "protein_names": [ { "name": "Plant invertase/pectin methylesterase inhibitor superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191127", "database": "RefSeq", "url": 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"name": "F-box/FBD/LRR protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191126" }, "gene_names": [], "protein_names": [ { "name": "F-box/FBD/LRR protein", "type": "synonym", "evidence": [ { "id": "NP_191126", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191126" }, { "id": "Q9M055", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M055/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M055", "url": "https://www.uniprot.org/uniprotkb/Q9M055" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M055", "locus": {} } ], "crossref": [ { "id": "AT3G55670", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G55670", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824733", "url": "https://www.ncbi.nlm.nih.gov/gene/824733", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G55670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191126", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191126", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G55670", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G55670", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M055", "url": "https://www.uniprot.org/uniprotkb/Q9M055", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M055-1", "url": "https://www.uniprot.org/uniprotkb/Q9M055-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLENQSETTANIQLNAPELVEANIAEVTSITIEKFLGSFTSVTRLLLNLSPLKNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRLDWGREEEKEIATYILKNGRRLKKETFTTNPIESEGLNKLKERLKVLNGLDGVQAPLFRKDGVVVGKWNQPKNVPQCLLSHLETFVWTRYRWEREEEKEEATYILKNARLLSKATFSTNIIDLKEFHWFKK", "length": 218, "header": "tr|Q9M055-1|Q9M055_ARATH Isoform 1 of F-box/FBD/LRR protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M055-1" }, "isoforms": [ { "isoform_ac": "Q9M055-1", "url": "https://www.uniprot.org/uniprotkb/Q9M055/entry#Q9M055-1", "sequence": { "sequence": "MKLENQSETTANIQLNAPELVEANIAEVTSITIEKFLGSFTSVTRLLLNLSPLKNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRLDWGREEEKEIATYILKNGRRLKKETFTTNPIESEGLNKLKERLKVLNGLDGVQAPLFRKDGVVVGKWNQPKNVPQCLLSHLETFVWTRYRWEREEEKEEATYILKNARLLSKATFSTNIIDLKEFHWFKK", "length": 218, "header": "tr|Q9M055-1|Q9M055_ARATH Isoform 1 of F-box/FBD/LRR protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M055-1" }, "locus": { "chromosome": "3", "start_pos": 20658013, "end_pos": 20659503, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G55670.1", "url": "https://www.ensemblgenomes.org/id/AT3G55670.1" }, { "database": "Ensembl Peptide", "id": "AT3G55670.1", "url": "https://www.ensemblgenomes.org/id/AT3G55670.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M055", "url": "https://www.uniprot.org/uniprotkb/Q9M055" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M055", "url": "https://www.uniprot.org/uniprotkb/Q9M055" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G55670", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55670", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M055", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M055" }, { "id": "SM00579", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00579" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FBD", "eco_id": "ECO_0000259", "start_pos": 74, "end_pos": 153, "start_aa": "Glu", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 49, "end_pos": 51 }, { "start_pos": 5, "end_pos": 7 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M073-1", "uniprot_ac": "Q9M073", "uniprot_id": "Q9M073_ARATH", "mass": { "chemical_mass": 17877.0, "monoisotopic_mass": 17877.0 }, "refseq": {}, "gene_names": [ { "name": "T16I18.80", "type": "synonym", "evidence": [ { "id": "Q9M073", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M073" } ] }, { "name": "T16I18_80", "type": "synonym", "evidence": [ { "id": "Q9M073", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M073" } ] } ], "protein_names": [ { "name": "Polyketide cyclase/dehydrase and lipid transport superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9M073", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M073/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G32870", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G32870", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RYCEGPV", "url": "https://omabrowser.org/oma/group/RYCEGPV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M073", "url": "https://www.orthodb.org/?gene=Q9M073", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33789", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33789", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33789:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33789:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G32870", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G32870", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M073", "url": "https://www.uniprot.org/uniprotkb/Q9M073", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M073-1", "url": "https://www.uniprot.org/uniprotkb/Q9M073-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTETVSFKWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCSTTKTKEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEWSFVADPVDGWKKEDLESYVDFCLQHMANKMELNL", "length": 157, "header": "tr|Q9M073-1|Q9M073_ARATH Isoform 1 of Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M073-1" }, "isoforms": [ { "isoform_ac": "Q9M073-1", "url": "https://www.uniprot.org/uniprotkb/Q9M073/entry#Q9M073-1", "sequence": { "sequence": "MGTETVSFKWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCSTTKTKEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEWSFVADPVDGWKKEDLESYVDFCLQHMANKMELNL", "length": 157, "header": "tr|Q9M073-1|Q9M073_ARATH Isoform 1 of Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M073-1" }, "locus": { "chromosome": "4", "start_pos": 15862117, "end_pos": 15862814, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G32870.1", "url": "https://www.ensemblgenomes.org/id/AT4G32870.1" }, { "database": "Ensembl Peptide", "id": "AT4G32870.1", "url": "https://www.ensemblgenomes.org/id/AT4G32870.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": 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Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, 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Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M073", "url": "https://www.uniprot.org/uniprotkb/Q9M073" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G32870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G32870", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M073", "url": "https://www.uniprot.org/uniprotkb/Q9M073" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9M073", "url": 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"https://www.uniprot.org/uniprotkb/Q9M085" } ] } ], "protein_names": [ { "name": "non-specific serine/threonine protein kinase", "type": "recommended", "evidence": [ { "id": "Q9M085", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M085/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.1", "type": "synonym", "evidence": [ { "id": "Q9M085", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M085/entry#names_and_taxonomy" } ] }, { "name": "Protein kinase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001031758", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031758" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "common_name": "Mouse-ear cress", "glygen_name": 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"https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050167", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050167", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051681", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051681", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G31170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G31170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SAPATNC", "url": "https://omabrowser.org/oma/group/SAPATNC/", "database": "OMA", "categories": [ "Protein 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001031758", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031758", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "AT4G31170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G31170", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JRW3", "url": "https://www.uniprot.org/uniprotkb/F4JRW3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JRW3-1", "url": "https://www.uniprot.org/uniprotkb/F4JRW3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M085", "url": 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"MLENPKFDLHAVGNHNNDNNYYAFTQDFYQKLGEEGTNMSVDSMQTSNAGGSVSMSVDNSSVGSSDALIGHPGLKPMRHPYSLSDGQSVFRPGKVTHALNDDALAQALMDSKYPTEGLVNYEEWTIDLRKLHMGPAFAQGAFGKLYRGTYNGEDVAIKLLERSDSNPEKAQALEQQFQQEVSMLAFLKHPNIVRFIGACIKPMVWCIVTEYAKGGSVRQFLTKRQNRAVPLKLAVMQALDVARGMAYVHERNFIHRDLKSDNLLISADRSIKIADFGVARIEVQTEGMTPETGTYRWMAPERKQEGL", "length": 307, "header": "tr|F4JRW3-1|F4JRW3_ARATH Computationally mapped isoform of non-specific serine/threonine protein kinase OS=Arabidopsis thaliana OX=3702 GN=RAF28 PE=1 SV=1 CANONICAL=Q9M085-1" }, "locus": { "chromosome": "4", "start_pos": 15153182, "end_pos": 15155636, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G31170.4", "url": "https://www.ensemblgenomes.org/id/AT4G31170.4" }, { "database": "Ensembl Peptide", "id": "AT4G31170.4", "url": "https://www.ensemblgenomes.org/id/AT4G31170.4" } ] } }, { "isoform_ac": "Q9M085-1", "url": "https://www.uniprot.org/uniprotkb/Q9M085/entry#Q9M085-1", "sequence": { "sequence": "MLENPKFDLHAVGNHNNDNNYYAFTQDFYQKLGEEGTNMSVDSMQTSNAGGSVSMSVDNSSVGSSDALIGHPGLKPMRHPYSLSDGQSVFRPGKVTHALNDDALAQALMDSKYPTEGLVNYEEWTIDLRKLHMGPAFAQGAFGKLYRGTYNGEDVAIKLLERSDSNPEKAQALEQQFQQEVSMLAFLKHPNIVRFIGACIKPMVWCIVTEYAKGGSVRQFLTKRQNRAVPLKLAVMQALDVARGMAYVHERNFIHRDLKSDNLLISADRSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNRGVRPTVPADCLPVLGEIMTRCWDADPEVRPCFAEIVNLLEAAETEIMTNVRKARFRCCMTQPMTVD", "length": 412, "header": "tr|Q9M085-1|Q9M085_ARATH Isoform 1 of non-specific serine/threonine protein kinase OS=Arabidopsis thaliana OX=3702 GN=RAF28 PE=1 SV=1 CANONICAL=Q9M085-1" }, "locus": { "chromosome": "4", "start_pos": 15153173, "end_pos": 15155742, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G31170.8", "url": "https://www.ensemblgenomes.org/id/AT4G31170.8" }, { "database": "Ensembl Peptide", "id": "AT4G31170.8", "url": "https://www.ensemblgenomes.org/id/AT4G31170.8" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 351, "start_aa": "Thr", "end_pos": 351, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr351", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "enzyme", "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G31170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G31170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "pmid": "" }, { "name": "root epidermal cell differentiation", "id": "GO:0010053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010053", "evidence": [ { "database": "UniProtKB", "id": "Q9M085", "url": "https://www.uniprot.org/uniprotkb/Q9M085" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 333, "end_pos": 335, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ 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"url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_ac": "C0LGF5", "gene_name": "RGI5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_ac": "C0LGG3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG3" } ] } ] }, { "uniprot_ac": "C0LGG4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG4" } ] } ] }, { "uniprot_ac": "C0LGG6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_ac": "C0LGG7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG7" } ] } ] }, { "uniprot_ac": "C0LGG8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_ac": "C0LGG9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG9" } ] } ] }, { "uniprot_ac": "C0LGH2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH2" } ] } ] }, { "uniprot_ac": "C0LGH3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH3" } ] } ] }, { "uniprot_ac": "C0LGH8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ] } ] }, { "uniprot_ac": "C0LGI2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] } ] }, { "uniprot_ac": "C0LGI5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_ac": "C0LGJ1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_ac": "C0LGJ9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] } ] }, { "uniprot_ac": "C0LGK4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] } ] }, { "uniprot_ac": "C0LGK9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] } ] }, { "uniprot_ac": "C0LGL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_ac": "C0LGL9", "gene_name": "FEI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_ac": "C0LGN2", "gene_name": "LRR-RLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_ac": "C0LGP2", "gene_name": "MEE39", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_ac": "C0LGP4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] } ] }, { "uniprot_ac": "C0LGP9", "gene_name": "IMK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] } ] }, { "uniprot_ac": "C0LGQ4", "gene_name": "MDIS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ] } ] }, { "uniprot_ac": "C0LGQ5", "gene_name": "GSO1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_ac": "C0LGQ7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_ac": "C0LGQ9", "gene_name": "GHR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] } ] }, { "uniprot_ac": "C0LGR3", "gene_name": "RGI3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] }, { "uniprot_ac": "C0LGR6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_ac": "C0LGR9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] } ] }, { "uniprot_ac": "C0LGS2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_ac": "C0LGS3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_ac": "C0LGT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_ac": "C0LGT5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] } ] }, { "uniprot_ac": "C0LGT6", "gene_name": "EFR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] } ] }, { "uniprot_ac": "C0LGU0", "gene_name": "PRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_ac": "C0LGU1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] } ] }, { "uniprot_ac": "C0LGU5", "gene_name": "CIK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_ac": "C0LGU7", "gene_name": "MDIS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] } ] }, { "uniprot_ac": "C0LGV0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] } ] }, { "uniprot_ac": "C0LGV1", "gene_name": "RGI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_ac": "C0LGW2", "gene_name": "PAM74", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_ac": "C0LGW6", "gene_name": "ERL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_ac": "C0LGX1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] } ] }, { "uniprot_ac": "C0LGX3", "gene_name": "HSL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_ac": "D7SFH9", "gene_name": "LRK10L-2.6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "sn-glycero-3-phospho-(1'-rac-glycerol) + H2O = sn-glycerol 3-phosphate + glycerol + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] } ] }, { "uniprot_ac": "F4HPN2", "gene_name": "IRE4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] } ] }, { "uniprot_ac": "F4HPR9", "gene_name": "ATMAP4K", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] } ] }, { "uniprot_ac": "F4HQ17", "gene_name": "LRK10L-1.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] } ] }, { "uniprot_ac": "F4HQ20", "gene_name": "LRK10L-2.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] } ] }, { "uniprot_ac": "F4HQ22", "gene_name": "LRK10L-2.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] } ] }, { "uniprot_ac": "F4HQ23", "gene_name": "LRK10L-2.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] } ] }, { "uniprot_ac": "F4HQ34", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] } ] }, { "uniprot_ac": "F4HRJ4", "gene_name": "MAPKKK3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] } ] }, { "uniprot_ac": "F4HU55", "gene_name": "BSK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] } ] }, { "uniprot_ac": "F4HVB3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] } ] }, { "uniprot_ac": "F4HVH9", "gene_name": "RAF11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] } ] }, { "uniprot_ac": "F4HWU0", "gene_name": "CARK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] } ] }, { "uniprot_ac": "F4HX16", "gene_name": "PBL41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] } ] }, { "uniprot_ac": "F4HXP9", "gene_name": "XI-C", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] } ] }, { "uniprot_ac": "F4HYG2", "gene_name": "IRE3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] } ] }, { "uniprot_ac": "F4I065", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] } ] }, { "uniprot_ac": "F4I0Z0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] } ] }, { "uniprot_ac": "F4I2K0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] } ] }, { "uniprot_ac": "F4I2N7", "gene_name": "RLK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] } ] }, { "uniprot_ac": "F4I3K4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] } ] }, { "uniprot_ac": "F4I3M3", "gene_name": "BSK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] } ] }, { "uniprot_ac": "F4I3V3", "gene_name": "LRK10L-1.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] } ] }, { "uniprot_ac": "F4I4F2", "gene_name": "RHS3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] } ] }, { "uniprot_ac": "F4I6E4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] } ] }, { "uniprot_ac": "F4I7Y4", "gene_name": "BSK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] } ] }, { "uniprot_ac": "F4IAN2", "gene_name": "M3KDELTA7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] } ] }, { "uniprot_ac": "F4IB60", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] } ] }, { "uniprot_ac": "F4IB76", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] } ] }, { "uniprot_ac": "F4IP61", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] } ] }, { "uniprot_ac": "F4IPV6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] } ] }, { "uniprot_ac": "F4IS56", "gene_name": "ILK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] } ] }, { "uniprot_ac": "F4IV25", "gene_name": "PAX", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] } ] }, { "uniprot_ac": "F4IVI0", "gene_name": "BUB1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] } ] }, { "uniprot_ac": "F4J0D2", "gene_name": "PBL36", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_ac": "F4J3A9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] } ] }, { "uniprot_ac": "F4J3H7", "gene_name": "ZRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] } ] }, { "uniprot_ac": "F4J551", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] } ] }, { "uniprot_ac": "F4J6F6", "gene_name": "IREH1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] } ] }, { "uniprot_ac": "F4J927", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] } ] }, { "uniprot_ac": "F4J982", "gene_name": "SRPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] } ] }, { "uniprot_ac": "F4J9G8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] } ] }, { "uniprot_ac": "F4JC18", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] } ] }, { "uniprot_ac": "F4JDN8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] } ] }, { "uniprot_ac": "F4JEQ2", "gene_name": "PBL23", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] } ] }, { "uniprot_ac": "F4JI10", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] } ] }, { "uniprot_ac": "F4JN22", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] } ] }, { "uniprot_ac": "F4JPT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] } ] }, { "uniprot_ac": "F4JPX3", "gene_name": "PBL20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] } ] }, { "uniprot_ac": "F4JQX7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] } ] }, { "uniprot_ac": "F4JSF8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] } ] }, { "uniprot_ac": "F4JTP5", "gene_name": "STY46", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] } ] }, { "uniprot_ac": "F4JVS7", "gene_name": "MAPKKK16", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] } ] }, { "uniprot_ac": "F4JY37", "gene_name": "RUK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JY37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ] } ] }, { "uniprot_ac": "F4JZW1", "gene_name": "PBL13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_ac": "F4K645", "gene_name": "RAF10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] } ] }, { "uniprot_ac": "F4K6B8", "gene_name": "RGI4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] } ] }, { "uniprot_ac": "F4KA50", "gene_name": "LRK10L-2.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] } ] }, { "uniprot_ac": "F4KA51", "gene_name": "LRK10L-2.3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] } ] }, { "uniprot_ac": "F4KEF0", "gene_name": "MUL8.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] } ] }, { "uniprot_ac": "F4KFD4", "gene_name": "MYH9.10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] } ] }, { "uniprot_ac": "F4KI00", "gene_name": "ATRLCK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] } ] }, { "uniprot_ac": "O04086", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] } ] }, { "uniprot_ac": "O04533", "gene_name": "LECRK52", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] } ] }, { "uniprot_ac": "O04534", "gene_name": "LECRK51", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] } ] }, { "uniprot_ac": "O22040", "gene_name": "ANP1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] } ] }, { "uniprot_ac": "O22042", "gene_name": "ANP3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] } ] }, { "uniprot_ac": "O22178", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] } ] }, { "uniprot_ac": "O22476", "gene_name": "BRI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] } ] }, { "uniprot_ac": "O22558", "gene_name": "STY8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] } ] }, { "uniprot_ac": "O22764", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] } ] }, { "uniprot_ac": "O22833", "gene_name": "LECRK54", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] } ] }, { "uniprot_ac": "O22834", "gene_name": "LECRK53", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] } ] }, { "uniprot_ac": "O22932", "gene_name": "CIPK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] } ] }, { "uniprot_ac": "O22971", "gene_name": "CIPK13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] } ] }, { "uniprot_ac": "O23081", "gene_name": "CRK41", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O23081", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23081" } ] } ] }, { "uniprot_ac": "O23082", "gene_name": "CRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] } ] }, { "uniprot_ac": "O23145", "gene_name": "ASK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] } ] }, { "uniprot_ac": "O23236", "gene_name": "MPK14", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] } ] }, { "uniprot_ac": "O23304", "gene_name": "BLUS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] } ] }, { "uniprot_ac": "O23334", "gene_name": "DL3430W", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] } ] }, { "uniprot_ac": "O24527", "gene_name": "SIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] } ] }, { "uniprot_ac": "O48814", "gene_name": "BIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] } ] }, { "uniprot_ac": "O48837", "gene_name": "LECRKS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] } ] }, { "uniprot_ac": "O48963", "gene_name": "PHOT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] } ] }, { "uniprot_ac": "O49318", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] } ] }, { "uniprot_ac": "O49338", "gene_name": "CARK9", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "O49338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49338" } ] } ] }, { "uniprot_ac": "O49445", "gene_name": "LECRK72", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] } ] }, { "uniprot_ac": "O49545", "gene_name": "BAM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] } ] }, { "uniprot_ac": "O49564", "gene_name": "CRK27", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O49564", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49564" } ] } ] }, { "uniprot_ac": "O49717", "gene_name": "CPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] } ] }, { "uniprot_ac": "O49839", "gene_name": "PBL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] } ] }, { "uniprot_ac": "O49840", "gene_name": "PBL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] } ] }, { "uniprot_ac": "O64477", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] } ] }, { "uniprot_ac": "O64556", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] } ] }, { "uniprot_ac": "O64573", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] } ] }, { "uniprot_ac": "O64629", "gene_name": "AUR3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] } ] }, { "uniprot_ac": "O64639", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] } ] }, { "uniprot_ac": "O64682", "gene_name": "PID", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] } ] }, { "uniprot_ac": "O64768", "gene_name": "RAF24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] } ] }, { "uniprot_ac": "O64770", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] } ] }, { "uniprot_ac": "O64771", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] } ] }, { "uniprot_ac": "O64774", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] } ] }, { "uniprot_ac": "O64776", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] } ] }, { "uniprot_ac": "O64777", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] } ] }, { "uniprot_ac": "O64778", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] } ] }, { "uniprot_ac": "O64780", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] } ] }, { "uniprot_ac": "O64781", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] } ] }, { "uniprot_ac": "O64782", "gene_name": "SD129", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] } ] }, { "uniprot_ac": "O64783", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] } ] }, { "uniprot_ac": "O64784", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] } ] }, { "uniprot_ac": "O64793", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] } ] }, { "uniprot_ac": "O64794", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] } ] }, { "uniprot_ac": "O64812", "gene_name": "SRK2J", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] } ] }, { "uniprot_ac": "O64816", "gene_name": "CKA4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] } ] }, { "uniprot_ac": "O64817", "gene_name": "CKA3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] } ] }, { "uniprot_ac": "O64825", "gene_name": "LYK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] } ] }, { "uniprot_ac": "O64842", "gene_name": "PBL12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] } ] }, { "uniprot_ac": "O65238", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] } ] }, { "uniprot_ac": "O65405", "gene_name": "CRK28", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] } ] }, { "uniprot_ac": "O65440", "gene_name": "BAM3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] } ] }, { "uniprot_ac": "O65468", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65468", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65468" } ] } ] }, { "uniprot_ac": "O65472", "gene_name": "CRK12", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65472" } ] } ] }, { "uniprot_ac": "O65476", "gene_name": "CRK16", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65476" } ] } ] }, { "uniprot_ac": "O65479", "gene_name": "CRK20", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65479" } ] } ] }, { "uniprot_ac": "O65482", "gene_name": "CRK23", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65482", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65482" } ] } ] }, { "uniprot_ac": "O65483", "gene_name": "CRK24", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65483", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65483" } ] } ] }, { "uniprot_ac": "O65530", "gene_name": "PERK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] } ] }, { "uniprot_ac": "O65554", "gene_name": "CIPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] } ] }, { "uniprot_ac": "O65924", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] } ] }, { "uniprot_ac": "O80345", "gene_name": "CDKF-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] } ] }, { "uniprot_ac": "O80396", "gene_name": "MKK3", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] } ] }, { "uniprot_ac": "O80397", "gene_name": "MKK4", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] } ] }, { "uniprot_ac": "O80528", "gene_name": "HASPIN", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] } ] }, { "uniprot_ac": "O80673", "gene_name": "CRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] } ] }, { "uniprot_ac": "O80719", "gene_name": "CARK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] } ] }, { "uniprot_ac": "O80888", "gene_name": "MAPKKK17", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] } ] }, { "uniprot_ac": "O80902", "gene_name": "CIPK22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] } ] }, { "uniprot_ac": "O80939", "gene_name": "LECRK41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] } ] }, { "uniprot_ac": "O80963", "gene_name": "CCR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] } ] }, { "uniprot_ac": "O81064", "gene_name": "PBL37", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] } ] }, { "uniprot_ac": "O81067", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] } ] }, { "uniprot_ac": "O81069", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] } ] }, { "uniprot_ac": "O81291", "gene_name": "LECRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] } ] }, { "uniprot_ac": "O81292", "gene_name": "LECRK43", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] } ] }, { "uniprot_ac": "O81472", "gene_name": "MEKK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] } ] }, { "uniprot_ac": "O81832", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] } ] }, { "uniprot_ac": "O81833", "gene_name": "SD11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] } ] }, { "uniprot_ac": "O81905", "gene_name": "SD18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] } ] }, { "uniprot_ac": "O81906", "gene_name": "B120", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] } ] }, { "uniprot_ac": "O82318", "gene_name": "SKM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] } ] }, { "uniprot_ac": "O82754", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] } ] }, { "uniprot_ac": "P0C5E2", "gene_name": "LRK10L-1.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] } ] }, { "uniprot_ac": "P0DKI6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] } ] }, { "uniprot_ac": "P24100", "gene_name": "CDKA-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] } ] }, { "uniprot_ac": "P25859", "gene_name": "CDKB1-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] } ] }, { "uniprot_ac": "P27450", "gene_name": "CST", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] } ] }, { "uniprot_ac": "P42158", "gene_name": "CKL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] } ] }, { "uniprot_ac": "P42818", "gene_name": "ATPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] } ] }, { "uniprot_ac": "P43288", "gene_name": "ASK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] } ] }, { "uniprot_ac": "P43289", "gene_name": "ASK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] } ] }, { "uniprot_ac": "P43291", "gene_name": "SRK2A", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] } ] }, { "uniprot_ac": "P43292", "gene_name": "SRK2G", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] } ] }, { "uniprot_ac": "P43293", "gene_name": "PBL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] } ] }, { "uniprot_ac": "P43294", "gene_name": "MHK", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] } ] }, { "uniprot_ac": "P43298", "gene_name": "TMK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] } ] }, { "uniprot_ac": "P46573", "gene_name": "PBL10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] } ] }, { "uniprot_ac": "P47735", "gene_name": "RLK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] } ] }, { "uniprot_ac": "P51566", "gene_name": "AFC1", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] } ] }, { "uniprot_ac": "P51567", "gene_name": "AFC2", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] } ] }, { "uniprot_ac": "P51568", "gene_name": "AFC3", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] } ] }, { "uniprot_ac": "P92937", "gene_name": "CIPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] } ] }, { "uniprot_ac": "P92958", "gene_name": "KIN11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] } ] }, { "uniprot_ac": "P93025", "gene_name": "PHOT2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] } ] }, { "uniprot_ac": "P93050", "gene_name": "RKF3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] } ] }, { "uniprot_ac": "P93749", "gene_name": "CARK4", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "P93749", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93749" } ] } ] }, { "uniprot_ac": "P93756", "gene_name": "SD31", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] } ] }, { "uniprot_ac": "P93759", "gene_name": "CPK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] } ] }, { "uniprot_ac": "Q05609", "gene_name": "CTR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] } ] }, { "uniprot_ac": "Q05999", "gene_name": "D6PKL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] } ] }, { "uniprot_ac": "Q06548", "gene_name": "PBL9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] } ] }, { "uniprot_ac": "Q06850", "gene_name": "CPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] } ] }, { "uniprot_ac": "Q08466", "gene_name": "CKA2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] } ] }, { "uniprot_ac": "Q08467", "gene_name": "CKA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] } ] }, { "uniprot_ac": "Q0PW40", "gene_name": "CRK13", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] } ] }, { "uniprot_ac": "Q0V7T5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] } ] }, { "uniprot_ac": "Q0WNY5", "gene_name": "WAKL18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0WNY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WNY5" } ] } ] }, { "uniprot_ac": "Q0WPH8", "gene_name": "NEK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] } ] }, { "uniprot_ac": "Q0WRY5", "gene_name": "PBL7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] } ] }, { "uniprot_ac": "Q0WVM4", "gene_name": "CIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_ac": "Q1PDV6", "gene_name": "PBL27", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] } ] }, { "uniprot_ac": "Q1PE17", "gene_name": "CPK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] } ] }, { "uniprot_ac": "Q1PE89", "gene_name": "PBL24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] } ] }, { "uniprot_ac": "Q1PEM5", "gene_name": "PERK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] } ] }, { "uniprot_ac": "Q1PFB9", "gene_name": "AGC1-7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] } ] }, { "uniprot_ac": "Q1PFH8", "gene_name": "CPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] } ] }, { "uniprot_ac": "Q2MHE4", "gene_name": "HT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] } ] }, { "uniprot_ac": "Q2QAV0", "gene_name": "TIO", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] } ] }, { "uniprot_ac": "Q2V338", "gene_name": "WNK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] } ] }, { "uniprot_ac": "Q2V419", "gene_name": "CDKB1-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] } ] }, { "uniprot_ac": "Q2V452", "gene_name": "CIPK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] } ] }, { "uniprot_ac": "Q38868", "gene_name": "CPK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38868", "database": "UniProtKB", "url": 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"id": "Q38870", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38870" } ] } ] }, { "uniprot_ac": "Q38871", "gene_name": "CPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] } ] }, { "uniprot_ac": "Q38872", "gene_name": "CPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] } ] }, { "uniprot_ac": "Q38873", "gene_name": "CPK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] } ] }, { "uniprot_ac": "Q38997", "gene_name": "KIN10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] } ] }, { "uniprot_ac": "Q39008", "gene_name": "MEKK1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] } ] }, { "uniprot_ac": "Q39010", "gene_name": "ASK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] } ] }, { "uniprot_ac": "Q39011", "gene_name": "ASK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] } ] }, { "uniprot_ac": "Q39012", "gene_name": "ASK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39012", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39012" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39012", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39012" } ] } ] }, { "uniprot_ac": "Q39016", "gene_name": "CPK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39016", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39016" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39016", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39016" } ] } ] }, { "uniprot_ac": "Q39019", "gene_name": "ASK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39019", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39019" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39019", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39019" } ] } ] }, { "uniprot_ac": "Q39021", "gene_name": "MPK1", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] } ] }, { "uniprot_ac": "Q39022", "gene_name": "MPK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] } ] }, { "uniprot_ac": "Q39023", "gene_name": "MPK3", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] } ] }, { "uniprot_ac": "Q39024", "gene_name": "MPK4", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] } ] }, { "uniprot_ac": "Q39025", "gene_name": "MPK5", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] } ] }, { "uniprot_ac": "Q39026", "gene_name": "MPK6", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] } ] }, { "uniprot_ac": "Q39027", "gene_name": "MPK7", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] } ] }, { "uniprot_ac": "Q39030", "gene_name": "ATPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] } ] }, { "uniprot_ac": "Q39050", "gene_name": "CKL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39050" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39050" } ] } ] }, { "uniprot_ac": "Q39086", "gene_name": "SD17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39086" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39086" } ] } ] }, { "uniprot_ac": "Q39183", "gene_name": "D6PKL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39183", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39183" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39183", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39183" } ] } ] }, { "uniprot_ac": "Q39191", "gene_name": "WAK1", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q39191", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39191" } ] } ] }, { "uniprot_ac": "Q39192", "gene_name": "SRK2D", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39192", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39192" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39192", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39192" } ] } ] }, { "uniprot_ac": "Q39193", "gene_name": "SRK2I", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39193", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39193" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39193", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39193" } ] } ] }, { "uniprot_ac": "Q39202", "gene_name": "RLK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39202", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39202" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39202", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39202" } ] } ] }, { "uniprot_ac": "Q39203", "gene_name": "SD22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39203", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39203" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39203", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39203" } ] } ] }, { "uniprot_ac": "Q39238", "gene_name": "TOUSLED", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39238" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39238" } ] } ] }, { "uniprot_ac": "Q3E884", "gene_name": "LECRK110", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E884", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E884" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E884", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E884" } ] } ] }, { "uniprot_ac": "Q3E8W4", "gene_name": "ANX2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E8W4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E8W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E8W4" } ] } ] }, { "uniprot_ac": "Q3E9C0", "gene_name": "CPK34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3E9C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9C0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3E9C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9C0" } ] } ] }, { "uniprot_ac": "Q3E9X6", "gene_name": "CRK21", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q3E9X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3E9X6" } ] } ] }, { "uniprot_ac": "Q3EBR4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3EBR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EBR4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3EBR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EBR4" } ] } ] }, { "uniprot_ac": "Q3ECH2", "gene_name": "LRK10L-2.8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3ECH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3ECH2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3ECH2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3ECH2" } ] } ] }, { "uniprot_ac": "Q3EDL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] } ] }, { "uniprot_ac": "Q42371", "gene_name": "ERECTA", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] } ] }, { "uniprot_ac": "Q42396", "gene_name": "CPK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42396" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42396" } ] } ] }, { "uniprot_ac": "Q42438", "gene_name": "CPK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42438", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42438" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42438", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42438" } ] } ] }, { "uniprot_ac": "Q42479", "gene_name": "CPK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42479" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42479" } ] } ] }, { "uniprot_ac": "Q4V3C8", "gene_name": "PDPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q4V3C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4V3C8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q4V3C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q4V3C8" } ] } ] }, { "uniprot_ac": "Q5HZ38", "gene_name": "GRIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5HZ38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5HZ38" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5HZ38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5HZ38" } ] } ] }, { "uniprot_ac": "Q5PP29", "gene_name": "PBL4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5PP29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5PP29" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5PP29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5PP29" } ] } ] }, { "uniprot_ac": "Q5XF24", "gene_name": "CKL13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5XF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF24" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5XF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF24" } ] } ] }, { "uniprot_ac": "Q5XF57", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q5XF57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF57" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q5XF57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q5XF57" } ] } ] }, { 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6ICW6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6ICW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6ICW6" } ] } ] }, { "uniprot_ac": "Q6NKZ9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6NKZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKZ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6NKZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NKZ9" } ] } ] }, { "uniprot_ac": "Q6NLQ6", "gene_name": "CPK32", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6NLQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLQ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6NLQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NLQ6" } ] } ] }, { "uniprot_ac": "Q6NQ87", "gene_name": "CRK22", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q6NQ87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6NQ87" } ] } ] }, { "uniprot_ac": "Q6XAT2", "gene_name": "ERL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q6XAT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6XAT2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q6XAT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q6XAT2" } ] } ] }, { "uniprot_ac": "Q7FK82", "gene_name": "LECRK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": 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"2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84JQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84JQ4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84JQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84JQ4" } ] } ] }, { "uniprot_ac": "Q84M93", "gene_name": "MPK17", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] } ] }, { "uniprot_ac": "Q84M95", "gene_name": "PBL28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] } ] }, { "uniprot_ac": "Q84TI6", "gene_name": "CDKE-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] } ] }, { "uniprot_ac": "Q84VQ3", "gene_name": "CIPK26", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84VQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VQ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84VQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VQ3" } ] } ] }, { "uniprot_ac": "Q84VX4", "gene_name": "MPS1", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84VX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VX4" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q84VX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VX4" } ] } ] }, { "uniprot_ac": "Q8GUH1", "gene_name": "PUB33", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GUH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GUH1" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q8GUH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GUH1" } ] } ] }, { "uniprot_ac": "Q8GWJ7", "gene_name": "CRK19", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GWJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GWJ7" } ] } ] }, { "uniprot_ac": "Q8GX23", "gene_name": "PERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] } ] }, { "uniprot_ac": "Q8GXQ3", "gene_name": "WAKL6", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GXQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXQ3" } ] } ] }, { "uniprot_ac": "Q8GXZ3", "gene_name": "PBL8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GXZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GXZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXZ3" } ] } ] }, { "uniprot_ac": "Q8GY82", "gene_name": 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O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] } ] }, { "uniprot_ac": "Q8GZ99", "gene_name": "HPCA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GZ99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GZ99" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GZ99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GZ99" } ] } ] }, { "uniprot_ac": "Q8H186", "gene_name": "PBL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8H186", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H186" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8H186", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H186" } ] } ] }, { "uniprot_ac": "Q8H199", "gene_name": "CRK14", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8H199", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H199" } ] } ] }, { "uniprot_ac": "Q8H1D6", "gene_name": "RBK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8H1D6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1D6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8H1D6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1D6" } ] } ] }, { "uniprot_ac": "Q8H1E3", "gene_name": "PBL17", "activity": [ { "ec_number": "2.7.11.1", "activity": 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"activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] } ] }, { "uniprot_ac": "Q8LG64", "gene_name": "CDKB2-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] } ] }, { "uniprot_ac": "Q8LPI7", "gene_name": "CKL4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] } ] }, { "uniprot_ac": "Q8LPJ1", "gene_name": "CKL6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] } ] }, { "uniprot_ac": "Q8LPS5", "gene_name": "SERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_ac": "Q8LST2", "gene_name": "WNK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] } ] }, { "uniprot_ac": "Q8RWC9", "gene_name": "CIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWC9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWC9" } ] } ] }, { "uniprot_ac": "Q8RWG1", "gene_name": "ABC1K1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] }, { "ec_number": "2.7.-.-", "activity": "", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] } ] }, { "uniprot_ac": "Q8RWH3", "gene_name": "YAK1", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] } ] }, { "uniprot_ac": "Q8RWL2", "gene_name": "CPK29", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] } ] }, { "uniprot_ac": "Q8RWL6", "gene_name": "STY17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] } ] }, { "uniprot_ac": "Q8RWW0", "gene_name": "ALE2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] } ] }, { "uniprot_ac": "Q8RWX4", "gene_name": "KOC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWX4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWX4" } ] } ] }, { "uniprot_ac": "Q8RWZ5", "gene_name": "SD25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ5" } ] } ] }, { "uniprot_ac": "Q8RX66", "gene_name": "NEK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RX66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX66" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RX66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX66" } ] } ] }, { "uniprot_ac": "Q8RX80", "gene_name": "CRK18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RX80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX80" } ] } ] }, { "uniprot_ac": "Q8RXC8", "gene_name": "RBK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] } ] }, { "uniprot_ac": "Q8RXE5", "gene_name": "WNK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] } ] }, { "uniprot_ac": "Q8RXG3", "gene_name": "MKK5", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] } ] }, { "uniprot_ac": "Q8RXT4", "gene_name": "NEK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] } ] }, { "uniprot_ac": "Q8RY17", "gene_name": "WAKL22", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY17" } ] } ] }, { "uniprot_ac": "Q8RY65", "gene_name": "CIK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] } ] }, { "uniprot_ac": "Q8RY67", "gene_name": "WAKL14", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY67", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY67" } ] } ] }, { "uniprot_ac": "Q8S8S7", "gene_name": "PUB34", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor 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"url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] } ] }, { "uniprot_ac": "Q8W4S5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W4S5", "database": 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"activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGB1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGB1" } ] } ] }, { "uniprot_ac": "Q9FGC3", "gene_name": "MEE13.6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGC3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FGC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGC3" } ] } ] }, { "uniprot_ac": "Q9FGW5", "gene_name": "CDKG1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FGW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGW5" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9FGW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FGW5" } ] } ] }, { "uniprot_ac": "Q9FHD7", "gene_name": "BSK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHD7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHD7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHD7" } ] } ] }, { "uniprot_ac": "Q9FHG4", "gene_name": "LECRKS7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHG4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHG4" } ] } ] }, { "uniprot_ac": "Q9FHT0", "gene_name": "MNJ8.10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHT0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHT0" } ] } ] }, { "uniprot_ac": "Q9FHX3", "gene_name": "LECRKS6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FHX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FHX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FHX3" } ] } ] }, { "uniprot_ac": "Q9FIF0", "gene_name": "LECRK22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF0" } ] } ] }, { "uniprot_ac": "Q9FIF1", "gene_name": "LECRK21", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIF1" } ] } ] }, { "uniprot_ac": "Q9FII5", "gene_name": "TDR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FII5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FII5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FII5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FII5" } ] } ] }, { "uniprot_ac": "Q9FIJ6", "gene_name": "CCR4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] } ] }, { "uniprot_ac": "Q9FIL1", "gene_name": "BSK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] } ] }, { "uniprot_ac": "Q9FIL7", "gene_name": "CRCK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL7" } ] } ] }, { "uniprot_ac": "Q9FIM9", "gene_name": "CRK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIM9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIM9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIM9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIM9" } ] } ] }, { "uniprot_ac": "Q9FIU5", "gene_name": "CRLK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIU5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIU5" } ] } ] }, { "uniprot_ac": "Q9FIZ3", "gene_name": "GSO2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] } ] }, { "uniprot_ac": "Q9FJ54", "gene_name": "CIPK20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] } ] }, { "uniprot_ac": "Q9FJ55", "gene_name": "CIPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] } ] }, { "uniprot_ac": "Q9FJI4", "gene_name": "LECRK111", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] } ] }, { "uniprot_ac": "Q9FJV0", "gene_name": "MKK6", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] } ] }, { "uniprot_ac": "Q9FK63", "gene_name": "CAMRLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] } ] }, { "uniprot_ac": "Q9FKG5", "gene_name": "PUB51", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] } ] }, { "uniprot_ac": "Q9FKG6", "gene_name": "PUB52", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] } ] }, { "uniprot_ac": "Q9FKS4", "gene_name": "ATR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] } ] }, { "uniprot_ac": "Q9FKW4", "gene_name": "CPK28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] } ] }, { "uniprot_ac": "Q9FL28", "gene_name": "FLS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] } ] }, { "uniprot_ac": "Q9FLV4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] } ] }, { "uniprot_ac": "Q9FLZ3", "gene_name": "KIN12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] } ] }, { "uniprot_ac": "Q9FM85", "gene_name": "PBL16", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] } ] }, { "uniprot_ac": "Q9FMP5", "gene_name": "CPK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] } ] }, { "uniprot_ac": "Q9FMY3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] } ] }, { "uniprot_ac": "Q9FN37", "gene_name": "PSKR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] } ] }, { "uniprot_ac": "Q9FN93", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] } ] }, { "uniprot_ac": "Q9FN94", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] } ] }, { "uniprot_ac": "Q9FNE1", "gene_name": "CRK42", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] } ] }, { "uniprot_ac": "Q9FPR3", "gene_name": "EDR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] } ] }, { "uniprot_ac": "Q9FR53", "gene_name": "TOR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] } ] }, { "uniprot_ac": "Q9FRS6", "gene_name": "PXL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] } ] }, { "uniprot_ac": "Q9FVS6", "gene_name": "ASK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] } ] }, { "uniprot_ac": "Q9FX43", "gene_name": "MKK9", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] } ] }, { "uniprot_ac": "Q9FX86", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] } ] }, { "uniprot_ac": "Q9FX99", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] } ] }, { "uniprot_ac": "Q9FXF2", "gene_name": "RKF1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] } ] }, { "uniprot_ac": "Q9FY48", "gene_name": "KEG", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] } ] }, { "uniprot_ac": "Q9FYC5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYC5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYC5" } ] } ] }, { "uniprot_ac": "Q9FYK0", "gene_name": "TMK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FYK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYK0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FYK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYK0" } ] } ] }, { "uniprot_ac": "Q9FZ36", "gene_name": "ANP2", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZ36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ36" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q9FZ36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ36" } ] } ] }, { "uniprot_ac": "Q9FZ59", "gene_name": "PEPR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] } ] }, { "uniprot_ac": "Q9FZB1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] } ] }, { "uniprot_ac": "Q9FZB8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] } ] }, { "uniprot_ac": "Q9LDI3", "gene_name": "CIPK24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] } ] }, { "uniprot_ac": "Q9LDM5", "gene_name": "CRK31", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDM5" } ] } ] }, { "uniprot_ac": "Q9LDN1", "gene_name": "CRK33", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN1" } ] } ] }, { "uniprot_ac": "Q9LDN6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] } ] }, { "uniprot_ac": "Q9LDQ1", "gene_name": "PEPKR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] } ] }, { "uniprot_ac": "Q9LDQ3", "gene_name": "CRK34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] } ] }, { 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"L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] } ] }, { "uniprot_ac": "Q9LEA3", "gene_name": "LECRK56", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] } ] }, { "uniprot_ac": "Q9LET1", "gene_name": "CRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] } ] }, { "uniprot_ac": "Q9LEU7", "gene_name": "CIPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] } ] }, { "uniprot_ac": "Q9LFA2", "gene_name": "KIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFA2" } ] }, { "ec_number": 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"https://www.uniprot.org/uniprotkb/Q9LFG1" } ] } ] }, { "uniprot_ac": "Q9LFH9", "gene_name": "LECRK81", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFH9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFH9" } ] } ] }, { "uniprot_ac": "Q9LFP7", "gene_name": "PBL34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFP7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFP7" } ] } ] }, { "uniprot_ac": "Q9LFS4", "gene_name": "CIK5", 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"ec_number": "2.7.11.34", "activity": "", "evidence": [ { "id": "Q9LHI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHI7" } ] } ] }, { "uniprot_ac": "Q9LHM1", "gene_name": "MEC18.8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LHM1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHM1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LHM1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHM1" } ] } ] }, { "uniprot_ac": "Q9LHP4", "gene_name": "RGI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LHP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHP4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LHP4", "database": "UniProtKB", "url": 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O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LMB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMB9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LMB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMB9" } ] } ] }, { "uniprot_ac": "Q9LMM5", "gene_name": "MPK11", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LMM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMM5" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LMM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMM5" } ] } ] }, { "uniprot_ac": "Q9LMN6", "gene_name": "WAK4", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMN6" } ] } ] }, { 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"[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] } ] }, { "uniprot_ac": "Q9LMT9", "gene_name": "WAKL13", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMT9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT9" } ] } ] }, { "uniprot_ac": "Q9LN59", "gene_name": "WAKL11", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LN59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LN59" } ] } ] }, { "uniprot_ac": "Q9LP24", 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O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPQ3" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9LPQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPQ3" } ] } ] }, { "uniprot_ac": "Q9LPT1", "gene_name": "PRK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPT1" } ] } ] }, { "uniprot_ac": "Q9LPZ3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPZ3", "database": "UniProtKB", "url": 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"id": "Q9LQ11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQ11" } ] } ] }, { "uniprot_ac": "Q9LQM8", "gene_name": "MKK10", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQM8" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9LQM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQM8" } ] } ] }, { "uniprot_ac": "Q9LQQ8", "gene_name": "PBL5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] } ] }, { "uniprot_ac": "Q9LQQ9", "gene_name": "MPK13", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] } ] }, { "uniprot_ac": "Q9LRP3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LRP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRP3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LRP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRP3" } ] } ] }, { "uniprot_ac": "Q9LRY1", "gene_name": "PBL25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LRY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRY1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LRY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRY1" } ] } ] }, { "uniprot_ac": "Q9LS26", "gene_name": "BSK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] } ] }, { "uniprot_ac": "Q9LS95", "gene_name": "PERK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] } ] }, { "uniprot_ac": "Q9LSE1", "gene_name": "CDG1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] } ] }, { "uniprot_ac": "Q9LSF1", "gene_name": "OXI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] } ] }, { "uniprot_ac": "Q9LSL5", "gene_name": "LECRK92", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] } ] }, { "uniprot_ac": "Q9LSR8", "gene_name": "LECRK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] } ] }, { "uniprot_ac": "Q9LSR9", "gene_name": "LECRK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] } ] }, { "uniprot_ac": "Q9LSS0", "gene_name": "LECRK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSS0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSS0" } ] } ] }, { "uniprot_ac": "Q9LSV3", "gene_name": "WAKL16", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LSV3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSV3" } ] } ] }, { "uniprot_ac": "Q9LSX4", "gene_name": "CKL8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSX4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSX4" } ] } ] }, { "uniprot_ac": "Q9LT35", "gene_name": "NEK6", "activity": [ { "ec_number": "2.7.11.34", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] }, { "ec_number": "2.7.11.34", "activity": "", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] } ] }, { "uniprot_ac": "Q9LT38", "gene_name": "UCNL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] } ] }, { "uniprot_ac": "Q9LT96", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] } ] }, { "uniprot_ac": "Q9LTC0", "gene_name": "PBL19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] } ] }, { "uniprot_ac": "Q9LTW5", "gene_name": "AGC1-5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LTW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTW5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LTW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTW5" } ] } ] }, { "uniprot_ac": "Q9LU47", "gene_name": "PUB53", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9LU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LU47" } ] } ] }, { "uniprot_ac": "Q9LUC3", "gene_name": "MPK19", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUC3" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LUC3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUC3" } ] } ] }, { "uniprot_ac": "Q9LUI6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUI6" } ] } ] }, { "uniprot_ac": "Q9LUK3", "gene_name": "PAXL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] } ] }, { "uniprot_ac": "Q9LUL2", "gene_name": "WAG2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] } ] }, { "uniprot_ac": "Q9LUT0", "gene_name": "CARK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUT0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUT0" } ] } ] }, { "uniprot_ac": "Q9LV37", "gene_name": "MPK9", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV37" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV37" } ] } ] }, { "uniprot_ac": "Q9LV48", "gene_name": "PERK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LV48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV48" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LV48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LV48" } ] } ] }, { "uniprot_ac": "Q9LVL5", "gene_name": "WNK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LVL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LVL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVL5" } ] } ] }, { "uniprot_ac": "Q9LVP0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LVP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVP0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LVP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LVP0" } ] } ] }, { "uniprot_ac": "Q9LW62", "gene_name": "CKL10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LW62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW62" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LW62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW62" } ] } ] }, { "uniprot_ac": "Q9LW66", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LW66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW66" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LW66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW66" } ] } ] }, { "uniprot_ac": "Q9LW83", "gene_name": "CES101", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LW83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW83" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LW83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LW83" } ] } ] }, { "uniprot_ac": "Q9LX29", "gene_name": "ACR4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LX29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX29" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LX29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX29" } ] } ] }, { "uniprot_ac": "Q9LX30", "gene_name": "GCN2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LX30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX30" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LX30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LX30" } ] } ] }, { "uniprot_ac": "Q9LXA5", "gene_name": "LECRK91", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LXA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXA5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LXA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LXA5" } ] } ] }, { "uniprot_ac": "Q9LY03", "gene_name": "IRK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LY03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY03" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LY03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY03" } ] } ] }, { "uniprot_ac": "Q9LY50", "gene_name": "CCR3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LY50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY50" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LY50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY50" } ] } ] }, { "uniprot_ac": "Q9LYN8", "gene_name": "EMS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LYN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYN8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LYN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYN8" } ] } ] }, { "uniprot_ac": "Q9LYQ8", "gene_name": "CIPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LYQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYQ8" } ] }, { "ec_number": 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"https://www.uniprot.org/uniprotkb/Q9SIQ7" } ] } ] }, { "uniprot_ac": "Q9SIT1", "gene_name": "TMK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SIT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SIT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIT1" } ] } ] }, { "uniprot_ac": "Q9SJ61", "gene_name": "CPK25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJ61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ61" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJ61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ61" } ] } ] }, { "uniprot_ac": "Q9SJG2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG2" } ] } ] }, { "uniprot_ac": "Q9SJG9", "gene_name": "MPK20", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG9" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9SJG9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJG9" } ] } ] }, { "uniprot_ac": "Q9SJM3", "gene_name": "KIPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SJM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJM3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SJM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJM3" } ] } ] }, { "uniprot_ac": "Q9SK34", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SK34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK34" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SK34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK34" } ] } ] }, { "uniprot_ac": "Q9SKB2", "gene_name": "SOBIR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SKB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKB2" } ] } ] }, { "uniprot_ac": "Q9SKG5", "gene_name": "SERK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKG5" } ] } ] }, { "uniprot_ac": "Q9SLI2", "gene_name": "NEK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SLI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SLI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLI2" } ] } ] }, { "uniprot_ac": "Q9SMQ4", "gene_name": "SRK2F", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SMQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SMQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ4" } ] } ] }, { "uniprot_ac": "Q9SN43", "gene_name": "CIPK12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN43" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN43" } ] } ] }, { "uniprot_ac": "Q9SN80", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN80" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN80" } ] } ] }, { "uniprot_ac": "Q9SN97", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SN97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN97" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SN97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN97" } ] } ] }, { "uniprot_ac": "Q9SNA0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] } ] }, { "uniprot_ac": "Q9SNA3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA3" } ] } ] }, { "uniprot_ac": "Q9SND6", "gene_name": "MAPKKK20", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SND6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND6" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q9SND6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND6" } ] } ] }, { "uniprot_ac": "Q9SPK4", "gene_name": "PPCK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SPK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SPK4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SPK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SPK4" } ] } ] }, { "uniprot_ac": "Q9SR05", "gene_name": "ANX1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SR05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR05" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SR05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR05" } ] } ] }, { "uniprot_ac": "Q9SR87", "gene_name": "LECRK61", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SR87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR87" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SR87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR87" } ] } ] }, { "uniprot_ac": "Q9SRH7", "gene_name": "PBL35", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] } ] }, { "uniprot_ac": "Q9SSA4", "gene_name": "CBC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] } ] }, { "uniprot_ac": "Q9SSF8", "gene_name": "CPK30", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSF8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSF8" } ] } ] }, { "uniprot_ac": "Q9SSL9", "gene_name": "PEPR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSL9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSL9" } ] } ] }, { "uniprot_ac": "Q9STF0", "gene_name": "LECRKS3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF0" } ] } ] }, { "uniprot_ac": "Q9STJ8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STJ8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STJ8" } ] } ] }, { "uniprot_ac": "Q9STK6", "gene_name": "WNK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STK6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STK6" } ] } ] }, { "uniprot_ac": "Q9STV4", "gene_name": "CIPK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9STV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STV4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9STV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STV4" } ] } ] }, { "uniprot_ac": "Q9SUA3", "gene_name": "D6PKL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SUA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SUA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUA3" } ] } ] }, { "uniprot_ac": "Q9SUL7", "gene_name": "CIPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SUL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUL7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SUL7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUL7" } ] } ] }, { "uniprot_ac": "Q9SV05", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SV05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV05" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SV05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV05" } ] } ] }, { "uniprot_ac": "Q9SV69", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SV69", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV69" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SV69", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV69" } ] } ] }, { "uniprot_ac": "Q9SV83", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SV83", "database": "UniProtKB", "url": 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NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0B3-1" }, "locus": { "chromosome": "4", "start_pos": 14894073, "end_pos": 14896844, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G30470.1", "url": "https://www.ensemblgenomes.org/id/AT4G30470.1" }, { "database": "Ensembl Peptide", "id": "AT4G30470.1", "url": "https://www.ensemblgenomes.org/id/AT4G30470.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, 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Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M0B3", "url": "https://www.uniprot.org/uniprotkb/Q9M0B3" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0B3", "url": "https://www.uniprot.org/uniprotkb/Q9M0B3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G30470", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G30470", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M0B3", "url": "https://www.uniprot.org/uniprotkb/Q9M0B3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "Q9M0B3", "url": "https://www.uniprot.org/uniprotkb/Q9M0B3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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"iPTMnet", "id": "Q9M0E1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0E1" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ], "site_lbl": "Ser426" }, { "start_pos": 47, "end_pos": 47, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0E1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0E1" } ], "site_lbl": "Thr47" }, { "start_pos": 49, "end_pos": 49, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0E1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0E1" } ], "site_lbl": "Ser49" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, 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"categories": [ "Protein" ] }, { "id": "AT4G29370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M0E6", "url": "https://www.uniprot.org/uniprotkb/Q9M0E6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0E6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0E6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIPKEEVERPQKKTKLPSLPCETSLFLQLPDEILVNCLARLSKSSYRSLSLVCKTFRSLLHSQPLYSARYQLGTTEICCLYLCLRFVTATEPVSRWFTLSRRSGSVLVPSDHSLPYSNSTVTMGSKIYGEHMGDAFGPSSAIWIYDCFTRSWGDVPNMKMKRENASACVLDDKIYVMGGCDSGGINWFEMFDVKTQCWRPLPANPDVKVMTEDNVRKIDVVGGKIYVKTGAEFMDWIYDVKRGKWSAADEYMSLLWSNSWCVIENVMYCYSCSRYRWYDLEARMWREVKGLKYLKRYSSASNDNRNRMVELVNFGGKLAILWDRFERPGRSENKNIWCAMVALNRDFEGEIWGTVEWLNVVLTVPKSYNFLRPIAVSV", "length": 378, "header": "sp|Q9M0E6-1|FBK90_ARATH Isoform 1 of F-box/kelch-repeat protein At4g29370 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M0E6-1" }, "isoforms": [ { "isoform_ac": "Q9M0E6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0E6/entry#Q9M0E6-1", "sequence": { "sequence": "MIPKEEVERPQKKTKLPSLPCETSLFLQLPDEILVNCLARLSKSSYRSLSLVCKTFRSLLHSQPLYSARYQLGTTEICCLYLCLRFVTATEPVSRWFTLSRRSGSVLVPSDHSLPYSNSTVTMGSKIYGEHMGDAFGPSSAIWIYDCFTRSWGDVPNMKMKRENASACVLDDKIYVMGGCDSGGINWFEMFDVKTQCWRPLPANPDVKVMTEDNVRKIDVVGGKIYVKTGAEFMDWIYDVKRGKWSAADEYMSLLWSNSWCVIENVMYCYSCSRYRWYDLEARMWREVKGLKYLKRYSSASNDNRNRMVELVNFGGKLAILWDRFERPGRSENKNIWCAMVALNRDFEGEIWGTVEWLNVVLTVPKSYNFLRPIAVSV", "length": 378, "header": "sp|Q9M0E6-1|FBK90_ARATH Isoform 1 of F-box/kelch-repeat protein At4g29370 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M0E6-1" }, "locus": { "chromosome": "4", "start_pos": 14455602, "end_pos": 14456852, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29370.1", "url": "https://www.ensemblgenomes.org/id/AT4G29370.1" }, { "database": "Ensembl Peptide", "id": "AT4G29370.1", "url": "https://www.ensemblgenomes.org/id/AT4G29370.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, 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"reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0E6", "url": "https://www.uniprot.org/uniprotkb/Q9M0E6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G29370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 118, "end_pos": 120, "annotation": "n_glycosylation_sequon" }, { "start_pos": 164, "end_pos": 166, "annotation": "n_glycosylation_sequon" } ], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M0F4-1", "uniprot_ac": "Q9M0F4", "uniprot_id": "Q9M0F4_ARATH", "mass": { "chemical_mass": 28746.0, "monoisotopic_mass": 28746.0 }, "refseq": {}, "gene_names": [ { "name": "F17A13.90", "type": "synonym", "evidence": [ { "id": "Q9M0F4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4" } ] }, { "name": "F17A13_90", "type": "synonym", "evidence": [ { "id": "Q9M0F4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4" } ] } ], "protein_names": [ { "name": "HAD superfamily, subfamily IIIB acid phosphatase", "type": "synonym", "evidence": [ { "id": "Q9M0F4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May function as somatic storage protein during early seedling development.", "evidence": [ { "database": "UniProtKB", "id": "Q9M0F4", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4#function" }, { "database": "UniProtKB", "id": "PIRNR002674", "url": "https://www.uniprot.org/uniprotkb/PIRNR002674#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0F4", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4", "locus": {} } ], "crossref": [ { "id": "cd07535", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07535", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "829048", "url": "https://www.ncbi.nlm.nih.gov/gene/829048", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005519", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005519", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014403", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014403", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G29270", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29270", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KTHIYGA", "url": "https://omabrowser.org/oma/group/KTHIYGA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M0F4", "url": "https://www.orthodb.org/?gene=Q9M0F4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31284", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31284", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31284:SF39", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31284:SF39", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03767", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03767", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G29270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M0F4", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0F4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFSRSSSITFFIVALFTVLINPAISSRAASFIKLPRSSIASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVGGDGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA", "length": 256, "header": "tr|Q9M0F4-1|Q9M0F4_ARATH Isoform 1 of HAD superfamily, subfamily IIIB acid phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0F4-1" }, "isoforms": [ { "isoform_ac": "Q9M0F4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0F4/entry#Q9M0F4-1", "sequence": { "sequence": "MTFSRSSSITFFIVALFTVLINPAISSRAASFIKLPRSSIASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVGGDGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA", "length": 256, "header": "tr|Q9M0F4-1|Q9M0F4_ARATH Isoform 1 of HAD superfamily, subfamily IIIB acid phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0F4-1" }, "locus": { "chromosome": "4", "start_pos": 14423627, "end_pos": 14424898, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29270.1", "url": "https://www.ensemblgenomes.org/id/AT4G29270.1" }, { "database": "Ensembl Peptide", "id": "AT4G29270.1", "url": "https://www.ensemblgenomes.org/id/AT4G29270.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", 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D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I4", "url": "https://www.uniprot.org/uniprotkb/Q9M0I4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck 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"url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser472" }, { "start_pos": 628, "end_pos": 628, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr628" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I7" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT4G28200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G28200", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287ADC2-1", "protein_name": "U3 small nucleolar RNA-associated protein 6 homolog", "gene_name": "UTP6", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAEIIQERIEDRLPELEQLERIGLFSRAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQYEINLLELIQRRRAHIGYSFKKDEIENSIVHRVQGVFRRASAKWKDDVQLWLSYVVFCKKWATKAQLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQEYFRMELMHAEKLRKEKQEFETAKMDVENLEYSEEILKGELARIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQREIYDDLQALHTDDPLTWDYVARRELEMESQPGDEPPTTKQAKVAEATRREERCCAVYEEAVKTLPTEAMWKCYLNFCMERFTKKTNSQLLREKRLERTMVAFRKAHELRLLPEVQYKQWSELLLQHNLFKEALEVAGAGTELFQDSVMMWQVKLQVLIASESPDVAMVFEEAFVRLKPQICLPLWISWAEWSEGAKSQEDTEAIFKKAVLAVMGADSVTLKDKYLDWAYRSSGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESCKMANLREYYERALREFGSVDSDLWMDYIKEELDHPLGRPENCGQIYWRAMKMLQGEAAELFVAKHAMHQAGHL", "length": 598 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1M805-1", "protein_name": "UTP6 small subunit processome component", "gene_name": "Utp6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEIIQERIEDRIPELEQLERIGLFSRAEIKAIIKKASDLEYKIHRRNLHKEDFISYVQYEINLLELIQRRRARIKYSFKKDEIEYSMVHRVQGIFGRASAKWKDDVQLWLSYIVFCKKWGTKAHLSKIFSNMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQEYFRMELMHAEKLRKEKQEFEKAAMDMGDFDHPEEILKGELARIVYKSAVSKIKGAEFHVSLLAISQLFDFAKDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPGEEQPVSKQAKAVEMGRREERCCAVYEEAVRTLPTEAMWKCYITFCLERFSKKTSSVSLRGQRLERTMRAFRKAHELKLLSEVQYKQWIDLLLRQDLFKEALQVAEAGTELFKDSVTMWQTKLLVLIDSKSPDVGVHFEEAFAHLKPQVCLSLWISWAEWSESVESQEDTEAIFKRALLAVTGANSITLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKEQDSSKMVNLREYYERALREFGSTDSDLWLDYMNEELNHPFGKPENCGQIYWRAMRMLQGQSASMFVAKHAMHQAGH", "length": 597 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q54WN5-1", "protein_name": "U3 small nucleolar RNA-associated protein 6 homolog", "gene_name": "utp6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYELELDRLFHKRGKAKNIEFDYRLRSALRHAIILFGSATKKFPKDEALWINALNIRMKRASKEGTGRLFSIALSNLPRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNKTDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKLNLDSLRKSEKIEKDEFITFGKEILSADKLKQSSLIRGQIAQIVFRKAIKSSIGQDFDFRKHFYKIASKFLDIGKDSENPMGAGELLQKEILESLVTDFPNDDKTYIFLASIEQSKSSEPSLLKRLNNSTKILNQGLTIIKSESYLFNYIHFIRQIIVDIKLKENKLIENITDILLKAYKYSIDNNILKESGYQYYIELLLELGKTNDAIKVSEESVKLFKNSNQLWNQRINLLIKNEMVVKLFDNLSNNNEYNNIDKCFEMAVKNCTSSTTSTTSSTSTSSSSNLFIEYFKYQVVFKFDKDYKKIVDLFEKLLKQLDEFYQKCILYEEERIEKNINDIRSLYEKCLSIKEISSKDVDVWLNYRNFELKSAGDIERANTIATRGKKSLADPLPLLSQLQ", "length": 609 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VCY6-1", "protein_name": "U3 small nucleolar RNA-associated protein 6 homolog", "gene_name": "Utp6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQYEINLLELIQRRRARIKYSFKKDEIEYSMVHRVQGVFGRASAKWKDDVQLWLSYIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQEYFRMELMHAEKLRKEKQEFEKAAMDMGDFDHPEEILKGELARIIYKNSISKIKGAEFHVSLLAIAQLFDFAKDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPGEEQPVSKQAKAVEMGRREERCCAVYEEAVKALPTEAMWKCYITFCLERFSKKTSSVPLRGQRLERTMLAFRKAHELKLLSEVQYKQWIDLLLRQDLFKEALQVAEAGTELFKDSVTMWQTKLQVLIDSKSPDVEMRFEEAFAHLKPQVCLPLWISWAEWSESAKSQEDTEAIFKKAIIAVTGASSVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKEQEPCKMVNLREYYERALREFGTSDSDLWMDYIKEELNHPFGKPENCGQIYWRAMKMLQGQSAELFVAKHAMHQAGH", "length": 597 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NYH9-1", "protein_name": "U3 small nucleolar RNA-associated protein 6 homolog", "gene_name": "UTP6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQYEINLLELIQRRRTRIGYSFKKDEIENSIVHRVQGVFQRASAKWKDDVQLWLSYVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYKEYFRMELMHAEKLRKEKEEFEKASMDVENPDYSEEILKGELAWIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCCAVYEEAVKTLPTEAMWKCYITFCLERFTKKSNSGFLRGKRLERTMTVFRKAHELKLLSECQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQVLIESKSPDIAMLFEEAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAVIGADSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESCNMANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENCGQIYWRAMKMLQGESAEAFVAKHAMHQTGHL", "length": 597 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W397-1", "protein_name": "U3 small nucleolar RNA-associated protein 6 homolog", "gene_name": "Dmel\\CG7246", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAEFIAEMQERLLPEYEQMKNYSVFTADQVREIVSRRERLFLKINKSHQSITDYLDFILYEKHMHMTIVDKEKKMHVKLTGLKASIATRIMRLYREALAKFNHDRRLWSNWIKFSRKSNPVEVAGIYEKMLLYHGDSPDLWVDAALWLYEFNRLNIDRVKDILLRGLQRHPDSEALNKCFFDIMLKEAALASNERNLAENTLSEQDIKLERVEAVYRNSMANITQLDYFVKLLESCEDHQELTGKLQRMIIDDMQEKFPREPGLWDLLAQRELRGFHLGDLEEEDLDTSDEEPASKKSRSVNGRSLKRRIQLCVTVYKSAVEELQTTEMWNMYLDAMLALNSDGKTERILKQQCLADALQAGHRSQLMGVKHYATLRKMLCTAPSGREAAVTILTEALKNDSSVEMHELLLATHIQSDSEPLIYELFNKIQKSMGSEALPLWRSVILYYRTRQDSLGARRLDEIYGLACKAAWPEFGELRSDYLRYLWQERSVEEARKEYAKLAILPPMSLALHRQMVQLESSAAACDQASLKYWRMCYDFMACYFGKTQPRVWVEYLAFERDHGEAKNISLLTQRALSTLEPQYVAAFEAERALAYVGASI", "length": 602 }, "evidence": [ { "id": "Q9M0I7", "url": "https://omabrowser.org/oma/group/Q9M0I7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Pwp2p-containing subcomplex of 90S preribosome", "id": "GO:0034388", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034388", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "pmid": "" }, { "name": "small-subunit processome", "id": "GO:0032040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032040", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "snoRNA binding", "id": "GO:0030515", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030515", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000462", "evidence": [ { "database": "UniProtKB", "id": "Q9M0I7", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 160, "end_pos": 162, "annotation": "n_glycosylation_sequon" }, { "start_pos": 470, "end_pos": 472, "annotation": "n_glycosylation_sequon" }, { "start_pos": 641, "end_pos": 643, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M0I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" }, { "id": "PF08640", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08640" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "U3 small nucleolar RNA-associated protein 6 N-terminal", "eco_id": "ECO_0000259", "start_pos": 9, "end_pos": 90, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9M0I7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0I7" }, { "id": "PF24892", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24892" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "U3 small nucleolar RNA-associated protein 6 homolog C-terminal", "eco_id": "ECO_0000259", "start_pos": 353, "end_pos": 640, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 248, 472, 628 ], "sequon_annotation_sites": [ { "start_pos": 160, "end_pos": 162 }, { "start_pos": 470, "end_pos": 472 }, { "start_pos": 641, "end_pos": 643 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M0I9-1", "uniprot_ac": "Q9M0I9", "uniprot_id": "Q9M0I9_ARATH", "mass": { "chemical_mass": 27609.0, "monoisotopic_mass": 27609.0 }, "refseq": {}, "gene_names": [ { "name": "F26K10.60", "type": "synonym", "evidence": [ { "id": "Q9M0I9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9" } ] }, { "name": "F26K10_60", "type": "synonym", "evidence": [ { "id": "Q9M0I9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M0I9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0I9", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9", "locus": {} } ], "crossref": [ { "id": "828933", "url": "https://www.ncbi.nlm.nih.gov/gene/828933", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9M0I9", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9M0I9*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "ath:AT4G28180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G28180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LELECFI", "url": "https://omabrowser.org/oma/group/LELECFI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33871", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33871", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33871:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33871:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G28180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G28180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M0I9", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M0I9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCCFSAGKVTAPPVAAAQIPPPLEEESVKEVVVQSVSVSVPIPISVPVPVPDLVPSAPTVSDSEAQVPLPLSPPAPEISHSKSDICSVSVSHSYSTATTATAASILEDDALSKPHRPPPPSSSTSRRNRPDRVLRSPAERHSPQGKQLRPRLVRERQSRQPNPTHNRRNVDSGPLPRSGLSDNPRRRSQSPATRAPSSARRSPMKKRVGAPEKDGATEVKKKEEETEKVTAEVKKEEDVTAVRDPEVSMECFIFL", "length": 256, "header": "tr|Q9M0I9-1|Q9M0I9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0I9-1" }, "isoforms": [ { "isoform_ac": "Q9M0I9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0I9/entry#Q9M0I9-1", "sequence": { "sequence": "MGCCFSAGKVTAPPVAAAQIPPPLEEESVKEVVVQSVSVSVPIPISVPVPVPDLVPSAPTVSDSEAQVPLPLSPPAPEISHSKSDICSVSVSHSYSTATTATAASILEDDALSKPHRPPPPSSSTSRRNRPDRVLRSPAERHSPQGKQLRPRLVRERQSRQPNPTHNRRNVDSGPLPRSGLSDNPRRRSQSPATRAPSSARRSPMKKRVGAPEKDGATEVKKKEEETEKVTAEVKKEEDVTAVRDPEVSMECFIFL", "length": 256, "header": "tr|Q9M0I9-1|Q9M0I9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0I9-1" }, "locus": { "chromosome": "4", "start_pos": 13982796, "end_pos": 13983717, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G28180.1", "url": "https://www.ensemblgenomes.org/id/AT4G28180.1" }, { "database": "Ensembl Peptide", "id": "AT4G28180.1", "url": "https://www.ensemblgenomes.org/id/AT4G28180.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 159, "end_pos": 159, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M0I9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M0I9" } ], "site_lbl": "Ser159" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGGGKDKHHDEQEKGFHGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAYGAHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHGKHGKHGMFGGGGKFKKWK", "length": 179, "header": "tr|Q9M0L8-1|Q9M0L8_ARATH Isoform 1 of Proline-rich family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0L8-1" }, "isoforms": [ { "isoform_ac": "Q9M0L8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0L8/entry#Q9M0L8-1", "sequence": { "sequence": "MGGGKDKHHDEQEKGFHGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAYGAHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHGKHGKHGMFGGGGKFKKWK", "length": 179, "header": "tr|Q9M0L8-1|Q9M0L8_ARATH Isoform 1 of Proline-rich family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0L8-1" }, "locus": { "chromosome": "4", "start_pos": 10498748, "end_pos": 10500809, "strand": "+", "evidence": [ { 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and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, 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reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0M7", "url": "https://www.uniprot.org/uniprotkb/Q9M0M7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana.", "journal": "Nature", "date": "1998", "authors": "Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W, Van Staveren M, Stiekema W, Drost L, Ridley P, Hudson S A, Patel K, Murphy G, Piffanelli P, Wedler H, Wedler E, Wambutt R, Weitzenegger T, Pohl T M, Terryn N, Gielen J, Villarroel R, De Clerck R, Van Montagu M, Lecharny A, Auborg S, Gy I, Kreis M, Lao N, Kavanagh T, Hempel S, Kotter P, Entian K D, Rieger M, Schaeffer M, Funk B, Mueller-Auer S, Silvey M, James R, Montfort A, Pons A, Puigdomenech P, Douka A, Voukelatou E, Milioni D, Hatzopoulos P, Piravandi E, Obermaier B, Hilbert H, D\u00fcsterh\u00f6ft A, Moores T, Jones J D, Eneva T, Palme K, Benes V, Rechman S, Ansorge W, Cooke R, Berger C, Delseny M, Voet M, Volckaert G, Mewes H W, Klosterman S, Schueller C, Chalwatzis N", "evidence": [ { "database": "UniProtKB", "id": "Q9M0M7", "url": "https://www.uniprot.org/uniprotkb/Q9M0M7" } ], "reference": [ { "type": "PubMed", "id": "9461215", "url": "https://glygen.org/publication/PubMed/9461215" } ] } ], "pathway": [ { "id": "ath:AT4G17200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G17200", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9M0M7-F1", "pdb_chain": "global", "start_pos": 1, 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"Ensembl Transcript", "id": "AT4G09490.1", "url": "https://www.ensemblgenomes.org/id/AT4G09490.1" }, { "database": "Ensembl Peptide", "id": "AT4G09490.1", "url": "https://www.ensemblgenomes.org/id/AT4G09490.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, 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"https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09360", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CILISCE", "url": "https://omabrowser.org/oma/group/CILISCE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11017", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11017", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11017:SF511", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11017:SF511", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00931", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00931", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20160", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20160", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23282", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23282", 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"MDVDMERLNPLLSIESENEVRMIGIWGMGGIGKTTIAKCLYEEYSRRFVHYCFIENVRIFAKNGLPYLQEKLLSEIRGKKQETLWSVEKGCRLIKSKLKEKNFLVLDDVDNVDQLHALAKETSWFGPGSRIIITTRDFGLLYSFGVRLLYRVSFLDDNDAIKVFKHVAFDGGQPPFDVYHQFSVRASRLAQGLPSALEAFGALGILETVPQKRIKDILKTSYDGLDEEEQAAFLHVACLFNGDSVHRVNALIDDGDMRIKALEVKSLIDISLDGCITLHVLIEQAAREIDTAMVEGVALHMCEMIHVLPIDGNILNTINNLKFFKAFTHIEVMNSKLQFLPGTANNSGGLGQLRRLDVTGSKNLREIPDLSRTMLLEELIMKGCTRLEKTLDIRKGCPSRTWTKATPTNNIEASQRSKEAEFSCKPIYRREDTHRLVASHGNRRAPLLYSEQKIPDELVMVPKKRFPIISSFYDLKSLSIMRFSHIADGTPFRCISFSGFQCLVELNLINLNIQKIPDNIGLMQSLEKVDLSGNDFRNLPASTKNLSKLKYARLSNCIKLEAFVELTELQTLKLSGCTNLESLLELPYAVQDVGRFCLLALELDNCKNLQALSEQLSHFSNLIHLDLSSHDFEKLKSVEELPLNLKHLYAHGCDSLESVDLSPKHSIKHLDLSHCFGLQQDEQQITQFLNDKCSQEVSQRFLCLPGTEVPRNFDNQSHGTSTKISLFTPTLLSFAACILISCERSFYLQFPAFSYDWNRKDDEVISINLTPNLNLSSEIEEEETVTSHHLVIIHVPSSINTDKIEDLRLESSLQFPEEFQFSPCEIRACGIRMVDEETKCLESSPLMPLLEKK", "length": 853, "header": "tr|Q9M0Q5-1|Q9M0Q5_ARATH Isoform 1 of ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0Q5-1" }, "isoforms": [ { "isoform_ac": "Q9M0Q5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5/entry#Q9M0Q5-1", "sequence": { "sequence": "MDVDMERLNPLLSIESENEVRMIGIWGMGGIGKTTIAKCLYEEYSRRFVHYCFIENVRIFAKNGLPYLQEKLLSEIRGKKQETLWSVEKGCRLIKSKLKEKNFLVLDDVDNVDQLHALAKETSWFGPGSRIIITTRDFGLLYSFGVRLLYRVSFLDDNDAIKVFKHVAFDGGQPPFDVYHQFSVRASRLAQGLPSALEAFGALGILETVPQKRIKDILKTSYDGLDEEEQAAFLHVACLFNGDSVHRVNALIDDGDMRIKALEVKSLIDISLDGCITLHVLIEQAAREIDTAMVEGVALHMCEMIHVLPIDGNILNTINNLKFFKAFTHIEVMNSKLQFLPGTANNSGGLGQLRRLDVTGSKNLREIPDLSRTMLLEELIMKGCTRLEKTLDIRKGCPSRTWTKATPTNNIEASQRSKEAEFSCKPIYRREDTHRLVASHGNRRAPLLYSEQKIPDELVMVPKKRFPIISSFYDLKSLSIMRFSHIADGTPFRCISFSGFQCLVELNLINLNIQKIPDNIGLMQSLEKVDLSGNDFRNLPASTKNLSKLKYARLSNCIKLEAFVELTELQTLKLSGCTNLESLLELPYAVQDVGRFCLLALELDNCKNLQALSEQLSHFSNLIHLDLSSHDFEKLKSVEELPLNLKHLYAHGCDSLESVDLSPKHSIKHLDLSHCFGLQQDEQQITQFLNDKCSQEVSQRFLCLPGTEVPRNFDNQSHGTSTKISLFTPTLLSFAACILISCERSFYLQFPAFSYDWNRKDDEVISINLTPNLNLSSEIEEEETVTSHHLVIIHVPSSINTDKIEDLRLESSLQFPEEFQFSPCEIRACGIRMVDEETKCLESSPLMPLLEKK", "length": 853, "header": "tr|Q9M0Q5-1|Q9M0Q5_ARATH Isoform 1 of ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M0Q5-1" }, "locus": { "chromosome": "4", "start_pos": 5940186, "end_pos": 5943280, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G09360.1", "url": "https://www.ensemblgenomes.org/id/AT4G09360.1" }, { "database": "Ensembl Peptide", "id": "AT4G09360.1", "url": "https://www.ensemblgenomes.org/id/AT4G09360.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [ "enzyme" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants.", "journal": "Mol. Cell. Proteomics", "date": "2007", "authors": "Maor Rudy, Jones Alex, N\u00fchse Thomas S, Studholme David J, Peck Scott C, Shirasu Ken", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "reference": [ { "type": "PubMed", "id": "17272265", "url": "https://glygen.org/publication/PubMed/17272265" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G09360", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09360", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "Q9M0Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M0Q5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 545, "end_pos": 547, "annotation": "n_glycosylation_sequon" }, { "start_pos": 715, "end_pos": 717, "annotation": "n_glycosylation_sequon" }, { "start_pos": 768, "end_pos": 770, "annotation": "n_glycosylation_sequon" }, { "start_pos": 774, "end_pos": 776, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16301", "name": "", "equation": "NAD(+) + H2O = ADP-D-ribose + nicotinamide + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "O23530-2", "O48573-1", "F4HT77-1", "F4I902-1", "F4J339-1", "F4JNA9-1", "F4KHI3-1", 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"database": "Ensembl Peptide", "id": "AT4G09210.1", "url": "https://www.ensemblgenomes.org/id/AT4G09210.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M0U6/entry#names_and_taxonomy" } ] }, { "name": "RNI-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_567296", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567296" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0U6", "url": "https://www.uniprot.org/uniprotkb/Q9M0U6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "FBL22", "url": "https://www.uniprot.org/uniprotkb/Q9M0U6", "locus": {} } ], "crossref": [ { "id": "Q9M0U6", "url": "https://alphafold.ebi.ac.uk/entry/Q9M0U6", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G05490", "url": 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Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy 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Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M0W9", "url": "https://www.uniprot.org/uniprotkb/Q9M0W9" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M0W9", "url": "https://www.uniprot.org/uniprotkb/Q9M0W9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G05260", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G05260", "resource": "KEGG 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"Protein" ] }, { "id": "Q9M102-1", "url": "https://www.uniprot.org/uniprotkb/Q9M102-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTDSSLPVPLHPPPRVPTPPLNPQELAAVTPYFPTSRPSAFQAFTVPTTQAGVRRHQVFPDSNISQASGAAITYGVRQVFEVGKSSRGAQDGESHNNMHLGESSKRKNLIILQRDKESRQHKQQETEQRMGGILKPPKKR", "length": 140, "header": "tr|Q9M102-1|Q9M102_ARATH Isoform 1 of Ta11-like non-LTR retrotransposon OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M102-1" }, "isoforms": [ { "isoform_ac": "Q9M102-1", "url": "https://www.uniprot.org/uniprotkb/Q9M102/entry#Q9M102-1", "sequence": { "sequence": "MTDSSLPVPLHPPPRVPTPPLNPQELAAVTPYFPTSRPSAFQAFTVPTTQAGVRRHQVFPDSNISQASGAAITYGVRQVFEVGKSSRGAQDGESHNNMHLGESSKRKNLIILQRDKESRQHKQQETEQRMGGILKPPKKR", "length": 140, "header": "tr|Q9M102-1|Q9M102_ARATH Isoform 1 of Ta11-like non-LTR retrotransposon OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M102-1" }, "locus": { "chromosome": "4", "start_pos": 2401927, "end_pos": 2402349, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G04730.1", "url": "https://www.ensemblgenomes.org/id/AT4G04730.1" }, { "database": "Ensembl Peptide", "id": "AT4G04730.1", "url": "https://www.ensemblgenomes.org/id/AT4G04730.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 18, "start_aa": "Thr", "end_pos": 18, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr18", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, 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Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M102", "url": "https://www.uniprot.org/uniprotkb/Q9M102" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M102", "url": "https://www.uniprot.org/uniprotkb/Q9M102" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G04730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G04730", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M102", "url": "https://www.uniprot.org/uniprotkb/Q9M102" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 63, "end_pos": 65, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M107-1", "uniprot_ac": "Q9M107", "uniprot_id": "Q9M107_ARATH", "mass": { "chemical_mass": 65145.0, "monoisotopic_mass": 65145.0 }, "refseq": {}, "gene_names": [ { "name": "T7M24.5", "type": "synonym", "evidence": [ { "id": "Q9M107", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M107" } ] }, { "name": "T7M24_5", "type": "synonym", "evidence": [ { "id": "Q9M107", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M107" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M107", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M107/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M107", "url": "https://www.uniprot.org/uniprotkb/Q9M107" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M107", "locus": {} } ], "crossref": [ { "id": "AT4G03830", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G03830", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825690", "url": "https://www.ncbi.nlm.nih.gov/gene/825690", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006736", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006736", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G03830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G03830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EWECYIR", "url": "https://omabrowser.org/oma/group/EWECYIR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31099", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31099", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31099:SF37", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31099:SF37", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04642", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04642", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G03830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G03830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M107", "url": "https://www.uniprot.org/uniprotkb/Q9M107", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M107-1", "url": "https://www.uniprot.org/uniprotkb/Q9M107-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPKRIQREVYSIDGQFGTYTSSQSTSRRLSLLKGAHGIPGRINLISPEATDSPETPSPGHACAFEIFFSECGLYFPLPDILIDFMHEFGIALPQLCPNVIRTILSLLTLAEEDNFLLSLPDLLQLYAIKKGRTQGTFFLSPRKGFRVFEDFPEKDEQWRKSFFFFRVNELTFGEKTGLFVSEWSARAASVDLLPISKTFASHFSSFVRQDLGWESLSSDRVRASGKRLRSRTDLAISSPPFEPRIFSEEEMSAPSYRAEKKMERERAKQEKDRLKSDKVVMTGTLEDSKLQAANKAKQPRAEEDGGARQKPSTLASKNDAPAPDSRTPSKATSSRDPSKRYGDKKRKQSDKDARSPARSVRVRTEERDASPSQQKEKGKKGDSQDLVKSIPLNAPFLRDTDNLLSSGHVSAPPLPFADLVRSFTHAGAPIPPLKELKPTNQENYLRFAEKLGELSDKDREIESFKQNEEENSRMVDRANSVLSRMREAEARVLALDIANTDLAAKLESGKNAYLAAIDNENRARAELLACEEKLRKLEEGQAALLADARREERRKVRAQFKDFTSKYQSFYAESEEV", "length": 578, "header": "tr|Q9M107-1|Q9M107_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M107-1" }, "isoforms": [ { "isoform_ac": "Q9M107-1", "url": "https://www.uniprot.org/uniprotkb/Q9M107/entry#Q9M107-1", "sequence": { "sequence": "MPPKRIQREVYSIDGQFGTYTSSQSTSRRLSLLKGAHGIPGRINLISPEATDSPETPSPGHACAFEIFFSECGLYFPLPDILIDFMHEFGIALPQLCPNVIRTILSLLTLAEEDNFLLSLPDLLQLYAIKKGRTQGTFFLSPRKGFRVFEDFPEKDEQWRKSFFFFRVNELTFGEKTGLFVSEWSARAASVDLLPISKTFASHFSSFVRQDLGWESLSSDRVRASGKRLRSRTDLAISSPPFEPRIFSEEEMSAPSYRAEKKMERERAKQEKDRLKSDKVVMTGTLEDSKLQAANKAKQPRAEEDGGARQKPSTLASKNDAPAPDSRTPSKATSSRDPSKRYGDKKRKQSDKDARSPARSVRVRTEERDASPSQQKEKGKKGDSQDLVKSIPLNAPFLRDTDNLLSSGHVSAPPLPFADLVRSFTHAGAPIPPLKELKPTNQENYLRFAEKLGELSDKDREIESFKQNEEENSRMVDRANSVLSRMREAEARVLALDIANTDLAAKLESGKNAYLAAIDNENRARAELLACEEKLRKLEEGQAALLADARREERRKVRAQFKDFTSKYQSFYAESEEV", "length": 578, "header": "tr|Q9M107-1|Q9M107_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M107-1" }, "locus": { "chromosome": "4", "start_pos": 1790440, "end_pos": 1792458, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G03830.1", "url": "https://www.ensemblgenomes.org/id/AT4G03830.1" }, { "database": "Ensembl Peptide", "id": "AT4G03830.1", "url": "https://www.ensemblgenomes.org/id/AT4G03830.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van 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"MGEGEAKAEHAAKADHKNAPSASSTPESYSKEGGGGGGDARRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAPSTCKVDV", "length": 227, "header": "tr|Q9M132-1|Q9M132_ARATH Isoform 1 of Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M132-1" }, "locus": { "chromosome": "4", "start_pos": 578028, "end_pos": 579287, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01410.1", "url": "https://www.ensemblgenomes.org/id/AT4G01410.1" }, { "database": "Ensembl Peptide", "id": "AT4G01410.1", "url": "https://www.ensemblgenomes.org/id/AT4G01410.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 127, "start_aa": "Thr", "end_pos": 127, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr127", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 21, "end_pos": 21, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser21" }, { "start_pos": 23, "end_pos": 23, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser23" }, { "start_pos": 24, "end_pos": 24, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser24" }, { "start_pos": 25, "end_pos": 25, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr25" }, { "start_pos": 28, "end_pos": 28, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser28" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M132", "url": "https://www.uniprot.org/uniprotkb/Q9M132" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.", "journal": "The Plant cell", "date": "2004-09", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" } ], "reference": [ { "type": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M132", "url": "https://www.uniprot.org/uniprotkb/Q9M132" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9M132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M132" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ], "pathway": [ { "id": "ath:AT4G01410", "name": "", "url": 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"site_annotation": [ { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M132", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M132" }, { "id": "PF03168", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03168" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Late embryogenesis abundant protein LEA-2 subgroup", "eco_id": "ECO_0000259", "start_pos": 99, "end_pos": 187, "start_aa": "Val", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 127 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 21, 23, 24, 25, 28 ], 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Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues 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"Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190165", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190165", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M165-1", "url": "https://www.uniprot.org/uniprotkb/Q9M165-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEMIETEISLSGYHKRYGHLKFIELSDPPLTKRPRYSPSVIPPLPDQNPIFTLKLSPILLKNNKRKRFTPKSSSSLSVEEITKQVFDGVVRKSSSWIKSEFLGRGSYGSVYLATSKKAKTKTTMAIKSAEISRASSLMDEERILTRLSSPFIVRCYGHEIAREETLFGGERTNYNLILEYCSGKSLFDLVNSNLGGLSEKDVKLLARDILYGLDYIHRANIIHCDIKPENILLAPVENRIRPNGYVAKIGDFGLALEKGSSEYEKASGHRRGTTRYMSPELIRHGIVDYAVDTWAFGCTVLEMLTGQQVWGEHSDLGSVDWDILIGQSCYIPYIPDWLSEEAQHFLSRCLKRDPASSCKMKYPTLYLVCVSGSFGK", "length": 376, "header": "tr|Q9M165-1|Q9M165_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9M165-1" }, "isoforms": [ { "isoform_ac": "Q9M165-1", "url": "https://www.uniprot.org/uniprotkb/Q9M165/entry#Q9M165-1", "sequence": { "sequence": "MEMIETEISLSGYHKRYGHLKFIELSDPPLTKRPRYSPSVIPPLPDQNPIFTLKLSPILLKNNKRKRFTPKSSSSLSVEEITKQVFDGVVRKSSSWIKSEFLGRGSYGSVYLATSKKAKTKTTMAIKSAEISRASSLMDEERILTRLSSPFIVRCYGHEIAREETLFGGERTNYNLILEYCSGKSLFDLVNSNLGGLSEKDVKLLARDILYGLDYIHRANIIHCDIKPENILLAPVENRIRPNGYVAKIGDFGLALEKGSSEYEKASGHRRGTTRYMSPELIRHGIVDYAVDTWAFGCTVLEMLTGQQVWGEHSDLGSVDWDILIGQSCYIPYIPDWLSEEAQHFLSRCLKRDPASSCKMKYPTLYLVCVSGSFGK", "length": 376, "header": "tr|Q9M165-1|Q9M165_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9M165-1" }, "locus": { "chromosome": "3", "start_pos": 16825005, "end_pos": 16826222, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45790.1", "url": "https://www.ensemblgenomes.org/id/AT3G45790.1" }, { "database": "Ensembl Peptide", "id": "AT3G45790.1", "url": "https://www.ensemblgenomes.org/id/AT3G45790.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G45790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45790", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9M165", "url": "https://www.uniprot.org/uniprotkb/Q9M165" } ], "pmid": "" } ] } ] }, 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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] }, { "uniprot_canonical_ac": "Q9M169-1", "uniprot_ac": "Q9M169", "uniprot_id": "Q9M169_ARATH", "mass": { "chemical_mass": 41909.0, "monoisotopic_mass": 41909.0 }, "refseq": { "ac": "NP_190160", "name": "hydrolase family protein / HAD-superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190160" }, "gene_names": [], "protein_names": [ { "name": "Hydrolase family protein / HAD-superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9M169", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M169/entry#names_and_taxonomy" } ] }, { "name": "hydrolase family protein / HAD-superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_190160", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190160" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M169", "locus": {} } ], "crossref": [ { "id": "AT3G45740", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G45740", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd07511", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07511", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "823716", "url": "https://www.ncbi.nlm.nih.gov/gene/823716", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006353", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006353", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G45740", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HDKRMLV", "url": "https://omabrowser.org/oma/group/HDKRMLV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LLU8", "url": "https://www.orthodb.org/?gene=A0A1I9LLU8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M169", "url": "https://www.orthodb.org/?gene=Q9M169", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14269", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14269", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14269:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14269:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13242", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13242", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190160", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190160", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLU8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLU8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M169-1", "url": "https://www.uniprot.org/uniprotkb/Q9M169-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNHLLILARNSLRRRNFNLRPPSRSFSSTISPESNRSSFGIAFDIDGVILLGSSPVGGSPSALRRLYDDSGALKIPFLFLTNGGGLPESKRASEMSHLLGVQVSPLQVIQAHSPFRKLVNRFENELVVAAGKGEPAAVMSNYGFKNVISMDEYASYFDNIDPLAPYKKLMFRQDGHKELRSREDVLSQRVQAAFIVSDPVDWSRDIQVLCDILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEKPLEYTSFGKPNPFVFKNAEDVLKEIATSPYSSNQGSHHFKTLYMIGDNPKIDIRGARQAGTPWFSILTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRESAKQSLLS", "length": 376, "header": "tr|Q9M169-1|Q9M169_ARATH Isoform 1 of Hydrolase family protein / HAD-superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M169-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLU8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M169/entry#A0A1I9LLU8-1", "sequence": { "sequence": "MSHLLGVQVSPLQVIQAHSPFRKLVNRFENELVVAAGKGEPAAVMSNYGFKNVISMDEYASYFDNIDPLAPYKKLMFRQDGHKELRSREDVLSQRVQAAFIVSDPVDWSRDIQVLCDILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEKPLEYTSFGKPNPFVFKNAEDVLKEIATSPYSSNQGSHHFKTLYMIGDNPKIDIRGARQAGTPWFSILTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRESAKQSLLS", "length": 282, "header": "tr|A0A1I9LLU8-1|A0A1I9LLU8_ARATH Computationally mapped isoform of Hydrolase family protein / HAD-superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M169-1" }, "locus": { "chromosome": "3", "start_pos": 16790761, "end_pos": 16793540, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45740.2", "url": "https://www.ensemblgenomes.org/id/AT3G45740.2" }, { "database": "Ensembl Peptide", "id": "AT3G45740.2", "url": "https://www.ensemblgenomes.org/id/AT3G45740.2" } ] } }, { "isoform_ac": "Q9M169-1", "url": "https://www.uniprot.org/uniprotkb/Q9M169/entry#Q9M169-1", "sequence": { "sequence": "MNHLLILARNSLRRRNFNLRPPSRSFSSTISPESNRSSFGIAFDIDGVILLGSSPVGGSPSALRRLYDDSGALKIPFLFLTNGGGLPESKRASEMSHLLGVQVSPLQVIQAHSPFRKLVNRFENELVVAAGKGEPAAVMSNYGFKNVISMDEYASYFDNIDPLAPYKKLMFRQDGHKELRSREDVLSQRVQAAFIVSDPVDWSRDIQVLCDILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEKPLEYTSFGKPNPFVFKNAEDVLKEIATSPYSSNQGSHHFKTLYMIGDNPKIDIRGARQAGTPWFSILTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRESAKQSLLS", "length": 376, "header": "tr|Q9M169-1|Q9M169_ARATH Isoform 1 of Hydrolase family protein / HAD-superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M169-1" }, "locus": { "chromosome": "3", "start_pos": 16790761, "end_pos": 16793540, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45740.1", "url": "https://www.ensemblgenomes.org/id/AT3G45740.1" }, { "database": "Ensembl Peptide", "id": "AT3G45740.1", "url": "https://www.ensemblgenomes.org/id/AT3G45740.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G45740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45740", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IJ50-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "hdhd5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAQMFSRLNMLGIGWRGVRFSRKVTNAAVSAQTQRRYSTDVDEQNRHLFGLLFDIDGVLVRGRTPIPAAKQCFRNLVDGDGKYKVPVVFVTNAGNALRQTKAEQLSHLLEVEVSPEQVVLSHSPLRVFTQFHDMCVLVSGQGPVVEVAHNVGFKNVVTIDMLREAYPLLDVVDHHRRPKDTIPQTKDLPHIDAVILFGEPIRWETNLQLIVDVLLTNGRPGNPVTSLHYPHIPVLACNMDLLWMAEAKNPRFGHGMFLVCLESIYKKITGCELKYEALIGKPSVVTYNYAELLIREQAEKLGWTRPVQRLYAIGDNPMADIYGANLYNRYLKAMNRSRTPQVQAQGGVSGQMAADLHCDDAKCSGQVMVGGSFEHCLPEACSSILVCTGVYNRDMPTDPQETLTEHRIFHGHRDFRFDPSLTQPSFIVNDVRDGVELVFQLEGWPLE", "length": 447 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0YEP4-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNDIDSGTECTFSMFTDDTKLRGAVNVLQGWDAVQRDQDRLEQWAQPPAFGFLFDIDGVLVRGSQVVPAAREAFRRLSDAGGRLRVPVVFLTNAGNCLRAAKARELSQALGLQVSPEQVILSHSPLRLFSQFHPKCVLVAGQGPVEENARNLGFKHVVTIEALRKAYPLLDMVDQSRRPKELPPPTTGFPTIEGVVLFGEPVRWETSLQLIIDVLLSNGNPGAEPEGIPYPHLPVLACNMDLLWMAEAKMPRFGHGTFLLCLENIYKKVTGRELKYEALIGKPSTVTYRYAEYLIKEQAEKHGWKAPIRRLYAIGDNPMSDVYGANLYNNYLKSAQQNQVEAGVKRIPQAANPQTEDRLAVESCESILVCTGVYRHNADVSRKPEECNMETVFHGHRDFCFDPSLVEASYIVQDVNEAVLLAFEKENWS", "length": 429 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZQB6-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "Hdhd5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVGLPPPRGSARAAADWLLGCARGGGSRVGETRSLRVRATSAMAALARLGVLGPGRCLWKLPVRLSAEFQGYGPRRGYVADRAERSPTFGLLFDIDGVLVRGHRVIPAALEAFSKLVNSQGQLQVPVVFVTNAGNILQRDKAQELSALLECKVDPDQVILSHSPMKLFLQYHNKRMLVSGQGPLVENARALGFQNVVTVDDLRIAFPELDMVDLQRRPKTMRPRSDFPAIEGVLLLGEPVRWETNLQLITDVLLSNGHPGAGLATAPYPHLPVLASNMDLLWMAEASMPRFGHGTFLLCLETIYRKITGHELKYEGLMGKPSILTYRYAEEVIRQQAERRGWAAPIRKLYAIGTCKWQMVERRSNGLMDKRSSGLQQPGAVLPSWCALVYTVLRTQAPKHLLLEGQSSHSTGTETSASVQSS", "length": 422 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N6K5-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGEAAARWAPGLWRRAVRTAAWLRGRRFASGGTQSPPTFGLLLDIDGVLVRGHQVIPAAQEAFRRLLDPQGQLRVPVVFVTNAGNISQCSKAEELSAQLGFQVEPDQVILSHSPMKLFSQHHDRRMLVSGQGPLVENARALGFKHLVTVDELRAAFPVLDMVDLQRRPKTTLLPRSDFPAIEGVLLLGEPVRWETSLQLITDVLLSDGNPGTGLATAPYPHLPVLASNTDLLWMAEAKMPRFGHGTFLLCLEAIYRKLTGRELCYSGLTGKPSLLTYRYAEGLLARQAARRGWAAPIRSLYAVGDNPMSDIYGANLFHQHLQTQQEGAARSCASILVCTGVYGPQAPSPTVPALGSEGSPFHGHRDFGFRPELLQAAHVVSDLHEAVQLVLRKEGWAL", "length": 401 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1SHR6-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MIGRAAGRACAVRAGGGPWLRSARWWRGGRPGCGGGRLAGRRAGPRGRRAGGQGRRGPSCLPSVQRPPTFGFLLDIDGVLVRGHRIIPAAQEAFHKLLNPEGQLRVPVVFVTNAGNILQHGKAQELSALLGFQVEPDQVILSHSPMRLFSQHHERRMLVSGQGPLVENARALGFKSLVTVDELRAAFPVLDMVDLQRRPKTTVIWASSWVLLLGEPVRWETSLQLIMDVLLSDGNPGTGLATAPYPHLPVLAMAGCFSGRFGHGTFLLCLEAIYRKVTGKELRYEGLMGKPSLLTYQYAEGLLRRQAERRGWAAPIRNLYAVGDNPMSDIYGANLFHQYLQTARSVGAEEGARGPWKQQPSTARSCTSILVCTGVYSPEAPESPGPGLLEAAHVVSDVHEAVQLVLRKEGWAL", "length": 413 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q54QC3-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAIDKTETTTATTTTTTTTTTTTTNDSSFGIVFDIDGVLMRDGVIIPNATQALKLLEDKETSEPKIPYIFMTNNGGFTEEEKANKISKVLQYNIPSDKVMVAHTPVRPLAEKYKDYDVLLISKTHETSKKLADWYGFKNYKSLQQYIEERPFLCPSKYSTFWTQGVSSEYVIKEAKKQLPIKAIILLEDPIDWGECIQIVSDILQSKDGLLRKDYINRADVQSIDFHICNPDFSYAGEFVIPRYTMGAILECIKLLFKTQTGRDLIYTLYGKPYPLTYQYGKQIISNQISKLGFNDGCILKHIYAIGDNPYSDIKGANNLEHEGWISILVKTGCFKGDTNHPEIPAKYVVDNVYDAVKLILKLEGQ", "length": 366 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q91WM2-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "Hdhd5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAALAGLGVLGAGRHLWKLPVRLSAGLQGCGPRRGYIAGSAERSPTFGLLFDIDGVLVRGHRVIPAALEAFSKLVNSQGQLRVPVVFVTNAGNILQHNKAQELSDLLRCKVDPDQVILSHSPMKLFLQYHSKQMLVSGQGPLVENARALGFQNVVTIDELRLAFPELDMVDLQRRPKTMRLRSDFPAIEGVLLLGEPVRWETNLQLIMDVLLSNGHPGTGLATAPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYRKITGNELKYEGLMGKPSILTYQYAEDVIRQQAERRGWAAPIRKLYAIGDNPMSDVYGANLFHQYLQMANRGEEEQQTGGQQKQRPSATQSCASILVCTGIYSSQDPGSQVPPPGRRELPFHGHRDFSFSPGLLEASHIVHDVNEAVQLVFHQEGWA", "length": 419 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXW7-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAWGCVAALGAARGLCWRAARAAAGLQGRPARRCYAVGPAQSPPTFGFLLDIDGVLVRGHRVIPAALKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQELSALLGCEVDADQVILSHSPMKLFSEYHEKRMLVSGQGPVMENAQGLGFRNVVTVDELRMAFPLLDMVDLERRLKTTPLPRNDFPRIEGVLLLGEPVRWETSLQLIMDVLLSNGSPGAGLATPPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYQKVTGKELRYEGLMGKPSILTYQYAEDLIRRQAERRGWAAPIRKLYAVGDNPMSDVYGANLFHQYLQKATHDGAPELGAGGTRQQQPSASQSCISILVCTGVYNPRNPQSTEPVLGGGEPPFHGHRDLCFSPGLMEASHVVNDVNEAVQLVFRKEGWALE", "length": 423 }, "evidence": [ { "id": "Q9M169", "url": "https://omabrowser.org/oma/group/Q9M169/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "pmid": "" }, { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "glycerophospholipid biosynthetic process", "id": "GO:0046474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046474", "evidence": [ { "database": "UniProtKB", "id": "Q9M169", "url": "https://www.uniprot.org/uniprotkb/Q9M169" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 344, "end_pos": 346, "annotation": "n_glycosylation_sequon" }, { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 344, "end_pos": 346 }, { "start_pos": 35, "end_pos": 37 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M170-1", "uniprot_ac": "Q9M170", "uniprot_id": "Q9M170_ARATH", "mass": { "chemical_mass": 7992.0, "monoisotopic_mass": 7992.0 }, "refseq": { "ac": "NP_190159", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190159" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M170", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M170/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_190159", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190159" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M170", "url": "https://www.uniprot.org/uniprotkb/Q9M170" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M170", "locus": {} } ], "crossref": [ { "id": "823715", "url": "https://www.ncbi.nlm.nih.gov/gene/823715", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G45730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VKIMIFR", "url": "https://omabrowser.org/oma/group/VKIMIFR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M170", "url": "https://www.orthodb.org/?gene=Q9M170", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "NP_190159", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190159", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M170", "url": "https://www.uniprot.org/uniprotkb/Q9M170", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M170-1", "url": "https://www.uniprot.org/uniprotkb/Q9M170-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELPSPYSSRKEESTVPPKRGRVKIMIFRDLVRSETSMAPTPRRGRIKKMIAGDLVGSGKQNNYDGDGKRGG", "length": 72, "header": "tr|Q9M170-1|Q9M170_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M170-1" }, "isoforms": [ { "isoform_ac": "Q9M170-1", "url": "https://www.uniprot.org/uniprotkb/Q9M170/entry#Q9M170-1", "sequence": { "sequence": "MELPSPYSSRKEESTVPPKRGRVKIMIFRDLVRSETSMAPTPRRGRIKKMIAGDLVGSGKQNNYDGDGKRGG", "length": 72, "header": "tr|Q9M170-1|Q9M170_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M170-1" }, "locus": { "chromosome": "3", "start_pos": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M189-1", "url": "https://www.uniprot.org/uniprotkb/Q9M189-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCSDTGKSMMEAIEAKEAEPVLIAGKELFPRSFLMGINIMGENLSEPALSRTWYWSPIEGLKPGGAIRKTNDFIRQEIARMNIHLETGINSTLRRKKGIVIGVARAVSTEMYRIVPGNLTTEEMDTAKLVVGDDGKIIVIKFDVDSVKLLLLLAQIHTRKSINPNLENYDRKRDSN", "length": 176, "header": "tr|Q9M189-1|Q9M189_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M189-1" }, "isoforms": [ { "isoform_ac": "Q9M189-1", "url": "https://www.uniprot.org/uniprotkb/Q9M189/entry#Q9M189-1", "sequence": { "sequence": "MCSDTGKSMMEAIEAKEAEPVLIAGKELFPRSFLMGINIMGENLSEPALSRTWYWSPIEGLKPGGAIRKTNDFIRQEIARMNIHLETGINSTLRRKKGIVIGVARAVSTEMYRIVPGNLTTEEMDTAKLVVGDDGKIIVIKFDVDSVKLLLLLAQIHTRKSINPNLENYDRKRDSN", "length": 176, "header": "tr|Q9M189-1|Q9M189_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M189-1" }, "locus": { "chromosome": "3", "start_pos": 14871213, "end_pos": 14871743, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G42780.1", "url": "https://www.ensemblgenomes.org/id/AT3G42780.1" }, { "database": "Ensembl Peptide", "id": "AT3G42780.1", "url": "https://www.ensemblgenomes.org/id/AT3G42780.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 87, "end_pos": 87, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M189", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M189" } ], "site_lbl": "Thr87" }, { "start_pos": 92, "end_pos": 92, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M189", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M189" } ], "site_lbl": "Thr92" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M189", "url": "https://www.uniprot.org/uniprotkb/Q9M189" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M189", "url": "https://www.uniprot.org/uniprotkb/Q9M189" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G42780", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G42780", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M189", "url": "https://www.uniprot.org/uniprotkb/Q9M189" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 118, "end_pos": 120, "annotation": "n_glycosylation_sequon" }, { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 87, 92 ], "sequon_annotation_sites": [ { "start_pos": 118, "end_pos": 120 }, { "start_pos": 43, "end_pos": 45 }, { "start_pos": 90, "end_pos": 92 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M198-1", "uniprot_ac": "Q9M198", "uniprot_id": "Q9M198_ARATH", "mass": { "chemical_mass": 33255.0, "monoisotopic_mass": 33255.0 }, "refseq": { "ac": "NP_191530", "name": "NAD(P)-binding Rossmann-fold superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191530" }, "gene_names": [], "protein_names": [ { "name": "NAD(P)-binding Rossmann-fold superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191530", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191530" }, { "id": "Q9M198", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M198/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M198", "url": "https://www.uniprot.org/uniprotkb/Q9M198" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M198", "locus": {} } ], "crossref": [ { "id": "AT3G59710", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59710", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825140", "url": "https://www.ncbi.nlm.nih.gov/gene/825140", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G59710", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59710", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YWANDSV", "url": "https://omabrowser.org/oma/group/YWANDSV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43490", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43490", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43490:SF60", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43490:SF60", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191530", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191530", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59710", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59710", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQ55", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ55-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ55-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ56", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ56-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ56-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M198", "url": "https://www.uniprot.org/uniprotkb/Q9M198", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M198-1", "url": "https://www.uniprot.org/uniprotkb/Q9M198-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDVVTLMYGLITYIIYAYGIIHEWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHFCCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLPPEKLATGKFYICVESKKLISKL", "length": 302, "header": "tr|Q9M198-1|Q9M198_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M198-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQ55-1", "url": "https://www.uniprot.org/uniprotkb/Q9M198/entry#A0A1I9LQ55-1", "sequence": { "sequence": "MNHLIPPLSPTNRFCVQTPFLHKFVNNLTWFLTFYYCYDYWRWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHFCCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLPPEKLATGKFYICVESKKLISKL", "length": 321, "header": "tr|A0A1I9LQ55-1|A0A1I9LQ55_ARATH Computationally mapped isoform of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M198-1" }, "locus": { "chromosome": "3", "start_pos": 22054667, "end_pos": 22056909, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59710.2", "url": "https://www.ensemblgenomes.org/id/AT3G59710.2" }, { "database": "Ensembl Peptide", "id": "AT3G59710.2", "url": "https://www.ensemblgenomes.org/id/AT3G59710.2" } ] } }, { "isoform_ac": "A0A1I9LQ56-1", "url": "https://www.uniprot.org/uniprotkb/Q9M198/entry#A0A1I9LQ56-1", "sequence": { "sequence": "MNHLIPPLSPTNRWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHFCCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLPPEKLATGKFYICVESKKLISKL", "length": 292, "header": "tr|A0A1I9LQ56-1|A0A1I9LQ56_ARATH Computationally mapped isoform of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M198-1" }, "locus": { "chromosome": "3", "start_pos": 22054937, "end_pos": 22056909, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59710.3", "url": "https://www.ensemblgenomes.org/id/AT3G59710.3" }, { "database": "Ensembl Peptide", "id": "AT3G59710.3", "url": "https://www.ensemblgenomes.org/id/AT3G59710.3" } ] } }, { "isoform_ac": "Q9M198-1", "url": "https://www.uniprot.org/uniprotkb/Q9M198/entry#Q9M198-1", "sequence": { "sequence": "MDVVTLMYGLITYIIYAYGIIHEWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHFCCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLPPEKLATGKFYICVESKKLISKL", "length": 302, "header": "tr|Q9M198-1|Q9M198_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M198-1" }, "locus": { "chromosome": "3", "start_pos": 22054937, "end_pos": 22057156, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59710.1", "url": "https://www.ensemblgenomes.org/id/AT3G59710.1" }, { "database": "Ensembl Peptide", "id": "AT3G59710.1", "url": "https://www.ensemblgenomes.org/id/AT3G59710.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFRMSRDHADFVAHGGTEWDDGAFVNVKKIKIFHDWAGITLVQFDYIDGTGAIVSGLDHGTEPFQFDREHGRVPVEGARAEFWLRDDEYITIVTAFGGYCVRKIEFITNKRTFDFGGFN", "length": 120, "header": "sp|Q9M1A6-1|JAL39_ARATH Isoform 1 of Jacalin-related lectin 39 OS=Arabidopsis thaliana OX=3702 GN=JAL39 PE=2 SV=1 CANONICAL=Q9M1A6-1" }, "isoforms": [ { "isoform_ac": "Q9M1A6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6/entry#Q9M1A6-1", "sequence": { "sequence": "MAFRMSRDHADFVAHGGTEWDDGAFVNVKKIKIFHDWAGITLVQFDYIDGTGAIVSGLDHGTEPFQFDREHGRVPVEGARAEFWLRDDEYITIVTAFGGYCVRKIEFITNKRTFDFGGFN", "length": 120, "header": "sp|Q9M1A6-1|JAL39_ARATH Isoform 1 of Jacalin-related lectin 39 OS=Arabidopsis thaliana OX=3702 GN=JAL39 PE=2 SV=1 CANONICAL=Q9M1A6-1" }, "locus": { "chromosome": "3", "start_pos": 22024002, "end_pos": 22024700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59620.2", "url": 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"UniProtKB", "id": "Q9M1A6", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Antagonistic jacalin-related lectins regulate the size of ER body-type beta-glucosidase complexes in Arabidopsis thaliana.", "journal": "Plant Cell Physiol.", "date": "2008", "authors": "Nagano Atsushi J, Fukao Yoichiro, Fujiwara Masayuki, Nishimura Mikio, Hara-Nishimura Ikuko", "evidence": [ { "database": "UniProtKB", "id": "Q9M1A6", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" } ], "reference": [ { "type": "PubMed", "id": "18467340", "url": "https://glygen.org/publication/PubMed/18467340" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1A6", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G59620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M1A6", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9M1A6", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9M1A6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 120, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9M1A6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9M1A6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M1A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1A6" }, { "id": "PRU01088", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU01088" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Jacalin-type lectin", "eco_id": "ECO_0000255", "start_pos": 6, "end_pos": 120, "start_aa": "Ser", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], 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{ "name": "Jacalin-related lectin 37", "type": "recommended", "evidence": [ { "id": "Q9M1A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9/entry#names_and_taxonomy" } ] }, { "name": "jacalin lectin family protein", "type": "synonym", "evidence": [ { "id": "NP_191518", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191518" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1A9", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "JAL37", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9", "locus": {} } ], "crossref": [ { "id": "Q9M1A9", "url": "https://alphafold.ebi.ac.uk/entry/Q9M1A9", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G59590", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G59590", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825128", "url": "https://www.ncbi.nlm.nih.gov/gene/825128", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001229", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001229", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036404", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036404", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G59590", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59590", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DEIMIAG", "url": "https://omabrowser.org/oma/group/DEIMIAG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47293:SF66", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47293:SF66", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01419", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01419", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M1A9", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M1A9", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191518", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191518", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1A9", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1A9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELSFKREKICSVEVNLDVPSIEVHSHNLPSYIPGYNGFFMTVEYCDGLVVYATENGIGICNPLLRQIRWIKSKVNYRYNGVGYDNSRPENHYKIFESCPYSDTTVKASITEFVSDAWISKPYEFAYDWDFMSSYSVSLNGALYWVAFHMASDDQFIQSFDFSTEKFEPYCLLPNKKCDPSNARSLAVFRGDRFSYLEQNYETRNIEIWVTKKEIKIENGKAVEWMNLMKVSVPKWSSLREKACIYIAKGDKFHEIIINDLVEYPTRHHRTYVPSLVPVPTFTMSNRSKTQQVESRFTPPRGIQASDGGNEWDDGIFHNVKKINVGVNDFDTVFVKFHYSKYNRIEAGAGHGNATTHNPDDEIMIAGGDYIEAVEGTYTESHITSITFRMRKGDMMPQYGRLNGTPFSLRGERGSKAIGFYGRSSGVHLTALGVHFSPPPLYYSFPNHSPVFNY", "length": 454, "header": "sp|Q9M1A9-1|JAL37_ARATH Isoform 1 of Jacalin-related lectin 37 OS=Arabidopsis thaliana OX=3702 GN=JAL37 PE=3 SV=1 CANONICAL=Q9M1A9-1" }, "isoforms": [ { "isoform_ac": "Q9M1A9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1A9/entry#Q9M1A9-1", "sequence": { "sequence": 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"https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051240", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051240", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60050", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60050", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YFLDEMV", "url": "https://omabrowser.org/oma/group/YFLDEMV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47933", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47933", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47933:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47933:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13812", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13812", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M1D8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M1D8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001326964", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326964", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60050", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60050", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1D8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNLALVLGTNVVRKAYRFLFISRKFCNGNFGGNEIDNGFPDLDCGFDEDSNISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR", "length": 473, "header": "sp|Q9M1D8-1|PP288_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M1D8-1" }, "isoforms": [ { "isoform_ac": "Q9M1D8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8/entry#Q9M1D8-1", "sequence": { "sequence": "MNLALVLGTNVVRKAYRFLFISRKFCNGNFGGNEIDNGFPDLDCGFDEDSNISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR", "length": 473, "header": "sp|Q9M1D8-1|PP288_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M1D8-1" }, "locus": { "chromosome": "3", "start_pos": 22180000, "end_pos": 22181970, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60050.1", "url": "https://www.ensemblgenomes.org/id/AT3G60050.1" }, { "database": "Ensembl Peptide", "id": "AT3G60050.1", "url": "https://www.ensemblgenomes.org/id/AT3G60050.1" } ] } } ], 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Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": 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Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60050", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60050", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "Q9M1D8", "url": "https://www.uniprot.org/uniprotkb/Q9M1D8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" }, { "start_pos": 74, "end_pos": 76, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": 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"categories": [ "Protein Classification" ] }, { "id": "PF00069", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190153", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190153", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45670", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45670", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1E0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEIDSEISDSSSSNNSMIPPLPQNPILTVKLSPIILHVRRCSKNIKKKKRTRTPLKKKKKSISSSVESIIGVSFKSASQKHSTTVTRDGGVKKISSWVKSRLLGEGAYGCVYLATSKDDIYKTERAIKSADVLKAWSLMHEGRILRSLQSPFVIRCYGHEIAREGTGHQYNLILEYCSGQCLADMIEDNQGGIPEFDVKQFAIDVLSGLSYIHRRNIIHCEIKPDNLLLSPVDHRFRSNGFLTKIADFGLSMEKGSKEYGNGRGHMRGTTRYMAPELIGGGLLDFAVDICAFGCSVLEMLTGKRVWGEYGDLAHDDWVDLIGHSDLTPQISIRLSAEAQDFLMRCLVKEPGSRWTIGELVDHPFLCSDEEFSHNGFVYD", "length": 379, "header": "tr|Q9M1E0-1|Q9M1E0_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1E0-1" }, "isoforms": [ { "isoform_ac": "Q9M1E0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0/entry#Q9M1E0-1", "sequence": { "sequence": "MEIDSEISDSSSSNNSMIPPLPQNPILTVKLSPIILHVRRCSKNIKKKKRTRTPLKKKKKSISSSVESIIGVSFKSASQKHSTTVTRDGGVKKISSWVKSRLLGEGAYGCVYLATSKDDIYKTERAIKSADVLKAWSLMHEGRILRSLQSPFVIRCYGHEIAREGTGHQYNLILEYCSGQCLADMIEDNQGGIPEFDVKQFAIDVLSGLSYIHRRNIIHCEIKPDNLLLSPVDHRFRSNGFLTKIADFGLSMEKGSKEYGNGRGHMRGTTRYMAPELIGGGLLDFAVDICAFGCSVLEMLTGKRVWGEYGDLAHDDWVDLIGHSDLTPQISIRLSAEAQDFLMRCLVKEPGSRWTIGELVDHPFLCSDEEFSHNGFVYD", "length": 379, "header": "tr|Q9M1E0-1|Q9M1E0_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1E0-1" }, "locus": { "chromosome": "3", "start_pos": 16765320, "end_pos": 16766459, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45670.1", "url": "https://www.ensemblgenomes.org/id/AT3G45670.1" }, { "database": "Ensembl Peptide", "id": "AT3G45670.1", "url": "https://www.ensemblgenomes.org/id/AT3G45670.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": 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A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G45670", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45670", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9M1E0", "url": "https://www.uniprot.org/uniprotkb/Q9M1E0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 14, "end_pos": 16, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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"mass": { "chemical_mass": 78508.0, "monoisotopic_mass": 78508.0 }, "refseq": { "ac": "NP_190139", "name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190139" }, "gene_names": [], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "NP_190139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190139" }, { "id": "Q9M1F4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1F4", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4", "locus": {} } ], "crossref": [ { "id": "AT3G45530", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G45530", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823694", "url": "https://www.ncbi.nlm.nih.gov/gene/823694", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G45530", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G45530", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKFTVHK", "url": "https://omabrowser.org/oma/group/CKFTVHK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF154", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF154", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190139", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190139", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45530", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45530", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1F4", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1F4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSFKIKGHPHRVSLVKNHDGLECDACDQSYGDAYSCGECKFTVHKKCTFLFEVVPEIFEHPSHVGHCLKLLTTGAPDHTVPKCHLCGKNTKRLLYHCRDCKLNVDIDCIIDPMCAQADLNMPWHHHPLFMGNFATNMTCDVCYDNHVDGYICLCCRLFVGWVCAALVIDSPEITHPCHTKHPLKLLTEGAPTYTDPKCHLCGEDTGKFIYHCDICKFNLDLVCAKTKTPPVALSNLKVHEHTLNLMPRLISFVCDACGTKGDRAPYVCHQCDFMVHKKCAHLPRVINVNHHDHRVSFKYPLGLGEWRCGVCFEEIDWSCGAYSCSLCPQYAIHSLCATRKDVWNGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLMSLSKDGEESSLCGACVLPIGSYTFYKCSKSNCSFILHEKCANISKKKRHFLSSEPLILCFESIIDDDFLCRACYQMFCEGFFYSSKGVNFDLICSSITMPFIHGSHDHHLLYVKQEEGNKKTCHNCDNERAKVLLGCIKCNYFLDFRCATMPLTIMLPRYDDHPLTLCYGEEKASGKYWCDICERETNPETWFYTCNDCGVTLHTFCVLGDIRNAKAGGSFRHHGELELLPNNRSTRPLCNSCHSRCPGSFIMKSYDGGEVYCSCYCVSSQLGYTYKGADTCPPWAIYELELIVVIHVNYLSTYILHYLTAIK", "length": 692, "header": "tr|Q9M1F4-1|Q9M1F4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1F4-1" }, "isoforms": [ { "isoform_ac": "Q9M1F4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1F4/entry#Q9M1F4-1", "sequence": { "sequence": "MSFKIKGHPHRVSLVKNHDGLECDACDQSYGDAYSCGECKFTVHKKCTFLFEVVPEIFEHPSHVGHCLKLLTTGAPDHTVPKCHLCGKNTKRLLYHCRDCKLNVDIDCIIDPMCAQADLNMPWHHHPLFMGNFATNMTCDVCYDNHVDGYICLCCRLFVGWVCAALVIDSPEITHPCHTKHPLKLLTEGAPTYTDPKCHLCGEDTGKFIYHCDICKFNLDLVCAKTKTPPVALSNLKVHEHTLNLMPRLISFVCDACGTKGDRAPYVCHQCDFMVHKKCAHLPRVINVNHHDHRVSFKYPLGLGEWRCGVCFEEIDWSCGAYSCSLCPQYAIHSLCATRKDVWNGKELDGVPEEVEDIEPFKRNDDNTITHFAHEHNLMSLSKDGEESSLCGACVLPIGSYTFYKCSKSNCSFILHEKCANISKKKRHFLSSEPLILCFESIIDDDFLCRACYQMFCEGFFYSSKGVNFDLICSSITMPFIHGSHDHHLLYVKQEEGNKKTCHNCDNERAKVLLGCIKCNYFLDFRCATMPLTIMLPRYDDHPLTLCYGEEKASGKYWCDICERETNPETWFYTCNDCGVTLHTFCVLGDIRNAKAGGSFRHHGELELLPNNRSTRPLCNSCHSRCPGSFIMKSYDGGEVYCSCYCVSSQLGYTYKGADTCPPWAIYELELIVVIHVNYLSTYILHYLTAIK", "length": 692, "header": "tr|Q9M1F4-1|Q9M1F4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1F4-1" }, "locus": { "chromosome": "3", "start_pos": 16701133, "end_pos": 16703459, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45530.1", "url": "https://www.ensemblgenomes.org/id/AT3G45530.1" }, { "database": "Ensembl Peptide", "id": "AT3G45530.1", "url": "https://www.ensemblgenomes.org/id/AT3G45530.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, 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"Organism-specific" ] }, { "id": "Q9M1F8", "url": "https://www.uniprot.org/uniprotkb/Q9M1F8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1F8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1F8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEYTPNLEGEGSIKVVETQSSAAKVLDDVVHRLYSKGLVSTDNVAAGFGVAICDQMDELLFEMKESVSDVEGVKVRALIRGLSESLDLGIRKIVIYCDDNELYQNITSGKCKPKQIKVVKQLIKEVQRLREKFASSEAILVAENDIKFAFELAREAIVSQTTSADDDGHDGDNNDDEDDNPWAYGCGCDWCLPDPPTKPNYDADYIEFYSL", "length": 211, "header": "tr|Q9M1F8-1|Q9M1F8_ARATH Isoform 1 of Reverse transcriptase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1F8-1" }, "isoforms": [ { "isoform_ac": "Q9M1F8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1F8/entry#Q9M1F8-1", "sequence": { "sequence": "MEYTPNLEGEGSIKVVETQSSAAKVLDDVVHRLYSKGLVSTDNVAAGFGVAICDQMDELLFEMKESVSDVEGVKVRALIRGLSESLDLGIRKIVIYCDDNELYQNITSGKCKPKQIKVVKQLIKEVQRLREKFASSEAILVAENDIKFAFELAREAIVSQTTSADDDGHDGDNNDDEDDNPWAYGCGCDWCLPDPPTKPNYDADYIEFYSL", "length": 211, "header": "tr|Q9M1F8-1|Q9M1F8_ARATH Isoform 1 of Reverse transcriptase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1F8-1" }, "locus": { "chromosome": "3", "start_pos": 16686962, "end_pos": 16687893, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G45490.1", "url": "https://www.ensemblgenomes.org/id/AT3G45490.1" }, { "database": "Ensembl Peptide", "id": "AT3G45490.1", "url": "https://www.ensemblgenomes.org/id/AT3G45490.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1F8", "url": "https://www.uniprot.org/uniprotkb/Q9M1F8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town 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} ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1K6", "url": "https://www.uniprot.org/uniprotkb/Q9M1K6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M1K6", "locus": {} } ], "crossref": [ { "id": "AT3G42990", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G42990", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823355", "url": "https://www.ncbi.nlm.nih.gov/gene/823355", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G42990", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G42990", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": 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"sequence": "MEHVKSLEGTEPTKQTPRTPQKHLSGIFGSGVVPRRVLRADDKYLGNRIKESSRARLENTSETLRVIFRPEFSSASGTSRYHPEANLVNASGKRSNSHKTSRLTTNRQEVPGSEENSLKPKHLNPKGKI", "length": 129, "header": "tr|Q9M1K6-1|Q9M1K6_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1K6-1" }, "locus": { "chromosome": "3", "start_pos": 15030354, "end_pos": 15031152, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G42990.1", "url": "https://www.ensemblgenomes.org/id/AT3G42990.1" }, { "database": "Ensembl Peptide", "id": "AT3G42990.1", "url": "https://www.ensemblgenomes.org/id/AT3G42990.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1K6", "url": "https://www.uniprot.org/uniprotkb/Q9M1K6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1K6", "url": "https://www.uniprot.org/uniprotkb/Q9M1K6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G42990", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G42990", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M1K6", "url": "https://www.uniprot.org/uniprotkb/Q9M1K6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": 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"id": "PTHR31339", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31339:SF84", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31339:SF84", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00295", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00295", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189881", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G42950", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G42950", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1L0", "url": "https://www.uniprot.org/uniprotkb/Q9M1L0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1L0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1L0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRRFLSSHKSLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDEQERLVKQSDSQNATDIDYEI", "length": 484, "header": "tr|Q9M1L0-1|Q9M1L0_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1L0-1" }, "isoforms": [ { "isoform_ac": "Q9M1L0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1L0/entry#Q9M1L0-1", "sequence": { "sequence": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M1L8-1", "uniprot_ac": "Q9M1L8", "uniprot_id": "Q9M1L8_ARATH", "mass": { "chemical_mass": 35191.0, "monoisotopic_mass": 35191.0 }, "refseq": { "ac": "NP_189873", "name": "heat shock protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189873" }, "gene_names": [], "protein_names": [ { "name": "Heat shock protein", "type": "synonym", "evidence": [ { "id": "Q9M1L8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8/entry#names_and_taxonomy" } ] }, { "name": "heat shock protein", "type": "synonym", "evidence": [ { "id": "NP_189873", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189873" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1L8", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8", "locus": {} } ], "crossref": [ { "id": "AT3G42870", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G42870", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823333", "url": "https://www.ncbi.nlm.nih.gov/gene/823333", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G42870", "url": 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"MAKMFGFKRLSGQMAFVAILRHEDYSDTDSGNMPQTEVPEMQEEEEVYRVTIDDDEIFQHCAARRQQRGRPNLQSTAKRESSAQRSGGSSRVSIRSGSRGSRKRQSFETTIEDNITSFREFQRQSFHPGAFDQDDYDEFKKAEAIFIPLDLPKHTRFYWACINALEELVYWRKYFIDIAASTDEDKVQLLEAMTGVSPNNQDVPKQLGSGHSFGHIQEWGTPPNAPHWGTPLIAPQWRQIFGKFQQVGSQGDGATMETPPIIQQTSSSGVGFTNYFETGQIPQTPRPGGLFNIYGTPQGSNANHHSNVGDEE", "length": 312, "header": "tr|Q9M1L8-1|Q9M1L8_ARATH Isoform 1 of Heat shock protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1L8-1" }, "isoforms": [ { "isoform_ac": "Q9M1L8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8/entry#Q9M1L8-1", "sequence": { "sequence": "MAKMFGFKRLSGQMAFVAILRHEDYSDTDSGNMPQTEVPEMQEEEEVYRVTIDDDEIFQHCAARRQQRGRPNLQSTAKRESSAQRSGGSSRVSIRSGSRGSRKRQSFETTIEDNITSFREFQRQSFHPGAFDQDDYDEFKKAEAIFIPLDLPKHTRFYWACINALEELVYWRKYFIDIAASTDEDKVQLLEAMTGVSPNNQDVPKQLGSGHSFGHIQEWGTPPNAPHWGTPLIAPQWRQIFGKFQQVGSQGDGATMETPPIIQQTSSSGVGFTNYFETGQIPQTPRPGGLFNIYGTPQGSNANHHSNVGDEE", "length": 312, "header": "tr|Q9M1L8-1|Q9M1L8_ARATH Isoform 1 of Heat shock protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M1L8-1" }, "locus": { "chromosome": "3", "start_pos": 14949456, "end_pos": 14951279, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G42870.1", "url": "https://www.ensemblgenomes.org/id/AT3G42870.1" }, { "database": "Ensembl Peptide", "id": "AT3G42870.1", "url": "https://www.ensemblgenomes.org/id/AT3G42870.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1L8", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1L8", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G42870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G42870", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M1L8", "url": "https://www.uniprot.org/uniprotkb/Q9M1L8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 114, "end_pos": 116, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 114, "end_pos": 116 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010666", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010666", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G42860", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G42860", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QENHWAR", "url": "https://omabrowser.org/oma/group/QENHWAR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33680", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33680", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33680:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33680:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": 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"MKKITIPVESLDEEDDFLLQLAAIEAEAAAKRPRVSSIPEGPYMAALKGSKSDQWQQSPLNPASKSRSVAVTTGGFQRSDGGGGVAGEQDFPEKSCPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCNDNVVSSPTSYSVTKNSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCTSPAQTTNTPGKRQRQY", "length": 372, "header": "tr|Q9M1L9-1|Q9M1L9_ARATH Isoform 1 of Zinc knuckle (CCHC-type) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1L9-1" }, "isoforms": [ { "isoform_ac": "Q9M1L9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1L9/entry#Q9M1L9-1", "sequence": { "sequence": 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"tr|Q9M1R7-1|Q9M1R7_ARATH Isoform 1 of Fold protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1R7-1" }, "isoforms": [ { "isoform_ac": "Q9M1R7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1R7/entry#Q9M1R7-1", "sequence": { "sequence": "MAFEESLVMVSSLSRLSICTSSAYDEAATKNQPDSCVSTSLENFDGAEADGEVSDDGEGKENVRESDSDKETRGFYSLPVTPSRRRRKLTVSGELDANESNKNGSKCSLRRQRREKKKKGVNGECDVGGREGLTVLTRARGGDRSLRMGLQEVKACRDLGFELEVPVPGRISVSTTGSNFDTQTSSGGDSPIATWRISSPGDDPKEVKARLKVWAQAVALASATRQAS", "length": 228, "header": "tr|Q9M1R7-1|Q9M1R7_ARATH Isoform 1 of Fold protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1R7-1" }, "locus": { "chromosome": "3", "start_pos": 22983517, "end_pos": 22984566, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G62070.1", "url": "https://www.ensemblgenomes.org/id/AT3G62070.1" }, { "database": "Ensembl Peptide", "id": "AT3G62070.1", "url": "https://www.ensemblgenomes.org/id/AT3G62070.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 81, "start_aa": "Thr", "end_pos": 81, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr81", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1R7", "url": "https://www.uniprot.org/uniprotkb/Q9M1R7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1R7", "url": "https://www.uniprot.org/uniprotkb/Q9M1R7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G62070", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62070", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 81 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 }, { "start_pos": 98, "end_pos": 100 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M1S4-1", "uniprot_ac": "Q9M1S4", "uniprot_id": "Q9M1S4_ARATH", "mass": { "chemical_mass": 86134.0, "monoisotopic_mass": 86134.0 }, "refseq": { "ac": "NP_191036", "name": "dentin sialophosphoprotein-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191036" }, "gene_names": [], "protein_names": [ { "name": "Dentin sialophosphoprotein-like protein", "type": "synonym", "evidence": [ { "id": "Q9M1S4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4/entry#names_and_taxonomy" } ] }, { "name": "dentin sialophosphoprotein-like protein", "type": "synonym", "evidence": [ { "id": "NP_191036", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191036" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1S4", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4", "locus": {} } ], "crossref": [ { "id": "cd00590", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00590", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824641", "url": "https://www.ncbi.nlm.nih.gov/gene/824641", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G54760", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54760", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NESNEAH", "url": "https://omabrowser.org/oma/group/NESNEAH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4JE18", "url": "https://www.orthodb.org/?gene=F4JE18", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M1S4", "url": "https://www.orthodb.org/?gene=Q9M1S4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35491", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35491", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35491:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35491:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_191036", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191036", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G54760", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G54760", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JE18", "url": "https://www.uniprot.org/uniprotkb/F4JE18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JE18-1", "url": "https://www.uniprot.org/uniprotkb/F4JE18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1S4", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1S4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEPREESEAVRDCSEPMEEAGKGSGLSSKTETLVDEDANTDLGVSDKNPNDGGLATVDVDDDDDVKRTDAVTEIECEGDTGTVEVKLNDETAKSEVKSKSGATHETAGEEETENSVANEATDEKATCEVEDNGGVCDAEQDVETENFQLNPVHGETLSVAEDKADQEKETTKKIEKDINEMEVDSKQEDEENETEDAKHSESAQVPEESTKLSKEETDEENQKEENGVAMEIDGVAGEHVEKVVKVGSGSDNACNESAGASMVQTQDVPIAEADNNESNVVKKMEIDERKDNADMTSDLTGTIESADSAIPNSPTEDAAPGEVEPLDHNALFDPTSDITNFIDFSGVSSWSGNIQDLKTETGNVSLKEDKKVTDMAEDVVTADIETESNEARVGVGAESPAAATDCSKETSDATLGSEENQQDKDHQCLDKKTADVQDTMIEEDDITHEAPSFDPNQKENAEMEENHNNFVYADDEAGSDVKTNGVKRKADVLSEDSPGEGRKTVSFAKVSFAERPSFKIGACIARAASQMAGSPSVLKGSNFGDETLSVESFVSQLHCAATDPVKENVVSDIATGFFLDFRNSSASQQVTTEKVSKKRGRPSNSNVAGTEAFEFEEMGDTYWTDRVIHNGGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIPHSATKKPADIDENAPAEIIMNFFETDTIPPEKSLSKMFRHFGPIQELRTEVDREKNRARVVFRKGADAEVAYNSAGRFNIFGTKVVKYELSRNVTETFKVQPYVVSLAEEDAAVCPSS", "length": 792, "header": "tr|Q9M1S4-1|Q9M1S4_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S4-1" }, "isoforms": [ { "isoform_ac": "F4JE18-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4/entry#F4JE18-1", "sequence": { "sequence": "MEEPREESEAVRDCSEPMEEAGKGSGLSSKTETLVDEDANTDLGVSDKNPNDGGLATVDVDDDDDVKRTDAVTEIECEGDTGTVEVKLNDETAKSEVKSKSGATHETAGEEETENSVANEATDEKATCEVEDNGGVCDAEQDVETENFQLNPVHGETLSVAEDKADQEKETTKKIEKDINEMEVDSKQEDEENETEDAKHSESAQVPEESTKLSKEETDEENQKEENGVAMEIDGVAGEHVEKVVKVGSGSDNACNESAGASMVQTQDVPIAEADNNESNVVKKMEIDERKDNADMTSDLTGTIESADSAIPNSPTEDAAPGNIQDLKTETGNVSLKEDKKVTDMAEDVVTADIETESNEARVGVGAESPAAATDCSKETSDATLGSEENQQDKDHQCLDKKTADVQDTMIEEDDITHEAPSFDPNQKENAEMEENHNNFVYADDEAGSDVKTNGVKRKADVLSEDSPGEGRKTVSFAKVSFAERPSFKIGACIARAASQMAGSPSVLKGSNFGDETLSVESFVSQLHCAATDPVKENVVSDIATGFFLDFRNSSASQQVTTEKVSKKRGRPSNSNVAGTEAFEFEEMGDTYWTDRVIHNGGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIPHSATKKPADIDENAPAEIIMNFFETDTIPPEKSLSKMFRHFGPIQELRTEVDREKNRARVVFRKGADAEVAYNSAGRFNIFGTKVVKYELSRNVTETFKVQPYVVSLAEEDAAVCPSS", "length": 761, "header": "tr|F4JE18-1|F4JE18_ARATH Computationally mapped isoform of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S4-1" }, "locus": { "chromosome": "3", "start_pos": 20269024, "end_pos": 20272504, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G54760.2", "url": "https://www.ensemblgenomes.org/id/AT3G54760.2" }, { "database": "Ensembl Peptide", "id": "AT3G54760.2", "url": "https://www.ensemblgenomes.org/id/AT3G54760.2" } ] } }, { "isoform_ac": "Q9M1S4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4/entry#Q9M1S4-1", "sequence": { "sequence": "MEEPREESEAVRDCSEPMEEAGKGSGLSSKTETLVDEDANTDLGVSDKNPNDGGLATVDVDDDDDVKRTDAVTEIECEGDTGTVEVKLNDETAKSEVKSKSGATHETAGEEETENSVANEATDEKATCEVEDNGGVCDAEQDVETENFQLNPVHGETLSVAEDKADQEKETTKKIEKDINEMEVDSKQEDEENETEDAKHSESAQVPEESTKLSKEETDEENQKEENGVAMEIDGVAGEHVEKVVKVGSGSDNACNESAGASMVQTQDVPIAEADNNESNVVKKMEIDERKDNADMTSDLTGTIESADSAIPNSPTEDAAPGEVEPLDHNALFDPTSDITNFIDFSGVSSWSGNIQDLKTETGNVSLKEDKKVTDMAEDVVTADIETESNEARVGVGAESPAAATDCSKETSDATLGSEENQQDKDHQCLDKKTADVQDTMIEEDDITHEAPSFDPNQKENAEMEENHNNFVYADDEAGSDVKTNGVKRKADVLSEDSPGEGRKTVSFAKVSFAERPSFKIGACIARAASQMAGSPSVLKGSNFGDETLSVESFVSQLHCAATDPVKENVVSDIATGFFLDFRNSSASQQVTTEKVSKKRGRPSNSNVAGTEAFEFEEMGDTYWTDRVIHNGGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIPHSATKKPADIDENAPAEIIMNFFETDTIPPEKSLSKMFRHFGPIQELRTEVDREKNRARVVFRKGADAEVAYNSAGRFNIFGTKVVKYELSRNVTETFKVQPYVVSLAEEDAAVCPSS", "length": 792, "header": "tr|Q9M1S4-1|Q9M1S4_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S4-1" }, "locus": { "chromosome": "3", 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Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S4", "url": "https://www.uniprot.org/uniprotkb/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. 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"19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean.", "journal": "Plant physiology", "date": "2012-05", "authors": "Meyer Louis J, Gao Jianjiong, Xu Dong, Thelen Jay J", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": 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phosphoproteins and putative substrates of constitutive triple response 1 kinase.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-12", "authors": "Yang Zhu, Guo Guangyu, Zhang Manyu, Liu Claire Y, Hu Qin, Lam Henry, Cheng Han, Xue Yu, Li Jiayang, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] }, { "title": "Identification of novel PAMP-triggered phosphorylation and dephosphorylation events in Arabidopsis thaliana by quantitative phosphoproteomic analysis.", "journal": "Journal of proteome research", "date": "2014-04-04", "authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski C\u00e9dric, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": 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Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9M1S4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M1S4" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1S6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSELSFSSRDVVNCCEYGCDYSLGACSSDPLARTVKRKFNEFKEGNNMMLLRGSSDSSSSNAKILVENECAALLEALSSQRETVKDLHLELEEERNAAASAANETMSMILRLQREKAEIQMEARQFKMFAQEKMTHDQEKLSVLENLLYEKEQAIEALTYEVEAYKHRLLSYGVSEAEIHDQILGFGRDSSTVGFDVYPCEYTSLECSVDENPSGPDGNFEIEEKVMVGQSPRWPYYDPNSPLGTAKDIKGASFADSPMSSSSDRVYTIDSIHVGVSEVKIDDEPNKMSKGKLNGDHWNSPRYQEPFTTQQGVNEPDIEKLYTRLQALEADRESLRQIIVSMRTDKAQLVLLKEIAQHLTKETGATSRRNPVSKMPSLKVFSVVTVFKWIVSFVSWKRKARQNKYVYELSANNMGMLMILGEGSGTRRWRCLTSSHV", "length": 438, "header": "tr|Q9M1S6-1|Q9M1S6_ARATH Isoform 1 of GTD-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S6-1" }, "isoforms": [ { "isoform_ac": "F4JE14-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6/entry#F4JE14-1", "sequence": { "sequence": "MMLLRGSSDSSSSNAKILVENECAALLEALSSQRETVKDLHLELEEERNAAASAANETMSMILRLQREKAEIQMEARQFKMFAQEKMTHDQEKLSVLENLLYEKEQAIEALTYEVEAYKHRLLSYGVSEAEIHDQILGFGRDSSTVGFDVYPCEYTSLECSVDENPSGPDGNFEIEEKVMVGQSPRWPYYDPNSPLGTAKDIKGASFADSPMSSSSDRVYTIDSIHVGVSEVKIDDEPNKMSKGKLNGDHWNSPRYQEPFTTQQGVNEPDIEKLYTRLQALEADRESLRQIIVSMRTDKAQLVLLKEIAQHLTKETGATSRRNPVSKMPSLKVFSVVTVFKWIVSFVSWKRKARQNKYVYELSANNMGMLMILGEGSGTRRWRCLTSSHV", "length": 390, "header": "tr|F4JE14-1|F4JE14_ARATH Computationally mapped isoform of GTD-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S6-1" }, "locus": { "chromosome": "3", "start_pos": 20262175, "end_pos": 20264686, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G54740.4", "url": "https://www.ensemblgenomes.org/id/AT3G54740.4" }, { "database": "Ensembl Peptide", "id": "AT3G54740.4", "url": "https://www.ensemblgenomes.org/id/AT3G54740.4" } ] } }, { "isoform_ac": "Q9M1S6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6/entry#Q9M1S6-1", "sequence": { "sequence": "MDSELSFSSRDVVNCCEYGCDYSLGACSSDPLARTVKRKFNEFKEGNNMMLLRGSSDSSSSNAKILVENECAALLEALSSQRETVKDLHLELEEERNAAASAANETMSMILRLQREKAEIQMEARQFKMFAQEKMTHDQEKLSVLENLLYEKEQAIEALTYEVEAYKHRLLSYGVSEAEIHDQILGFGRDSSTVGFDVYPCEYTSLECSVDENPSGPDGNFEIEEKVMVGQSPRWPYYDPNSPLGTAKDIKGASFADSPMSSSSDRVYTIDSIHVGVSEVKIDDEPNKMSKGKLNGDHWNSPRYQEPFTTQQGVNEPDIEKLYTRLQALEADRESLRQIIVSMRTDKAQLVLLKEIAQHLTKETGATSRRNPVSKMPSLKVFSVVTVFKWIVSFVSWKRKARQNKYVYELSANNMGMLMILGEGSGTRRWRCLTSSHV", "length": 438, "header": "tr|Q9M1S6-1|Q9M1S6_ARATH Isoform 1 of GTD-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1S6-1" }, "locus": { "chromosome": "3", "start_pos": 20262375, "end_pos": 20264661, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G54740.5", "url": "https://www.ensemblgenomes.org/id/AT3G54740.5" }, { "database": "Ensembl Peptide", "id": "AT3G54740.5", "url": "https://www.ensemblgenomes.org/id/AT3G54740.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G54740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54740", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "myosin XI tail binding", "id": "GO:0080115", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080115", "evidence": [ { "database": "UniProtKB", "id": "Q9M1S6", "url": "https://www.uniprot.org/uniprotkb/Q9M1S6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M1S6", "database": "UniProtKB", "url": 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"name": "transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190107" }, "gene_names": [], "protein_names": [ { "name": "Senescence regulator", "type": "recommended", "evidence": [ { "id": "Q9M1T8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M1T8/entry#names_and_taxonomy" } ] }, { "name": "transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)", "type": "synonym", "evidence": [ { "id": "NP_190107", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190107" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1T8", "url": "https://www.uniprot.org/uniprotkb/Q9M1T8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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"categories": [ "Protein Classification" ] }, { "id": "PTHR46525", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46525", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46525:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46525:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190107", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190107", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G45210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G45210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M1T8", "url": "https://www.uniprot.org/uniprotkb/Q9M1T8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1T8-1", "url": 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"Protein Classification" ] }, { "id": "PTHR36021", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36021", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36021:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36021:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_191539", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191539", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G59800", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G59800", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LT64", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT64", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LT64-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT64-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1Z4", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M1Z4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKNQAYKAMQRSRVGSSSAQPDEVEDGMVDGSFHTPEWHAARLASLKTTHTITWEEYKQKQKEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKSRKDKKDRDSKKKKSKKRKHYSSSESSSSSDEDESRRSRSSSKRSKKEKKHKSSRDKHSSKSKHETDGPVPLSRFFGNLKN", "length": 186, "header": "tr|Q9M1Z4-1|Q9M1Z4_ARATH Isoform 1 of Stress response protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1Z4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LT64-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4/entry#A0A1I9LT64-1", "sequence": { "sequence": "MGKNQAYKAMQRSRVGSSSAQPDEVEDGMVDGSFHTPEWHAARLASLKTTHTITWEEYKQKQKEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKSRKDKKDRDSKKKKSKKRKVPSKSLAYIR", "length": 134, "header": "tr|A0A1I9LT64-1|A0A1I9LT64_ARATH Computationally mapped isoform of Stress response protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1Z4-1" }, "locus": { "chromosome": "3", "start_pos": 22094363, "end_pos": 22096484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59800.2", "url": "https://www.ensemblgenomes.org/id/AT3G59800.2" }, { "database": "Ensembl Peptide", "id": "AT3G59800.2", "url": "https://www.ensemblgenomes.org/id/AT3G59800.2" } ] } }, { "isoform_ac": "Q9M1Z4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4/entry#Q9M1Z4-1", "sequence": { "sequence": "MGKNQAYKAMQRSRVGSSSAQPDEVEDGMVDGSFHTPEWHAARLASLKTTHTITWEEYKQKQKEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKSRKDKKDRDSKKKKSKKRKHYSSSESSSSSDEDESRRSRSSSKRSKKEKKHKSSRDKHSSKSKHETDGPVPLSRFFGNLKN", "length": 186, "header": "tr|Q9M1Z4-1|Q9M1Z4_ARATH Isoform 1 of Stress response protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M1Z4-1" }, "locus": { "chromosome": "3", "start_pos": 22094363, "end_pos": 22096484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G59800.1", "url": "https://www.ensemblgenomes.org/id/AT3G59800.1" }, { "database": "Ensembl Peptide", "id": "AT3G59800.1", "url": "https://www.ensemblgenomes.org/id/AT3G59800.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M1Z4", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M1Z4", "url": "https://www.uniprot.org/uniprotkb/Q9M1Z4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G59800", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G59800", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": 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"disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M201", "url": "https://www.uniprot.org/uniprotkb/Q9M201" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M201", "locus": {} } ], "crossref": [ { "id": "AT3G60590", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G60590", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825230", "url": "https://www.ncbi.nlm.nih.gov/gene/825230", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G60590", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60590", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QFWNIVA", "url": "https://omabrowser.org/oma/group/QFWNIVA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33918", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33918", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33918:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33918:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_850729", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850729", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JBW0", "url": "https://www.uniprot.org/uniprotkb/F4JBW0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JBW0-1", "url": "https://www.uniprot.org/uniprotkb/F4JBW0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JBW2", "url": "https://www.uniprot.org/uniprotkb/F4JBW2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JBW2-1", "url": "https://www.uniprot.org/uniprotkb/F4JBW2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M201", "url": "https://www.uniprot.org/uniprotkb/Q9M201", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M201-1", "url": "https://www.uniprot.org/uniprotkb/Q9M201-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVSQGMVSLTKSLCTMTPRVRLKNPNMLQKLKTGSCNFRFRNLRVLCTPKLSQWEPSPFIHASAEEAADIVLDKTANVFESIVSESAEEEKVDMSAQQRTNSQVQVLKWPIWLLGPSVLLTSGMAPTLWLPLSSVFLGSNVVSLLSLIGLDCIFNLGATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLFGSQSGLLASLQPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRILQLMRGLTLSAEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQPQSVASK", "length": 329, "header": "tr|Q9M201-1|Q9M201_ARATH Isoform 1 of Cytochrome P450 family protein OS=Arabidopsis 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"database": "Ensembl Peptide", "id": "AT3G60590.3", "url": "https://www.ensemblgenomes.org/id/AT3G60590.3" } ] } }, { "isoform_ac": "F4JBW2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M201/entry#F4JBW2-1", "sequence": { "sequence": "MSAQQRTNSQVQVLKWPIWLLGPSVLLTSGMAPTLWLPLSSVFLGSNVVSLLSLIGLDCIFNLGATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLFGSQSGLLASLQPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRILQLMRGLTLSAEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQPQSVASK", "length": 236, "header": "tr|F4JBW2-1|F4JBW2_ARATH Computationally mapped isoform of Cytochrome P450 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M201-1" }, "locus": { "chromosome": "3", "start_pos": 22398335, "end_pos": 22400181, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60590.1", "url": "https://www.ensemblgenomes.org/id/AT3G60590.1" }, { "database": "Ensembl Peptide", "id": "AT3G60590.1", "url": "https://www.ensemblgenomes.org/id/AT3G60590.1" } ] } }, { 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], "site_lbl": "Thr3" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, 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} ] }, { "title": "Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-10", "authors": "Wu Xu Na, Sanchez Rodriguez Clara, Pertl-Obermeyer Heidi, Obermeyer Gerhard, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9M204", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M204" } ], "reference": [ { "type": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M204", "url": "https://www.uniprot.org/uniprotkb/Q9M204" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60560", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60560", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M204", "url": "https://www.uniprot.org/uniprotkb/Q9M204" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], 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0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M207-1", "uniprot_ac": "Q9M207", "uniprot_id": "Q9M207_ARATH", "mass": { "chemical_mass": 14618.0, "monoisotopic_mass": 14618.0 }, "refseq": { "ac": "NP_191611", "name": "zinc ion-binding protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191611" }, "gene_names": [], "protein_names": [ { "name": "Zinc ion-binding protein", "type": "synonym", "evidence": [ { "id": "Q9M207", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M207/entry#names_and_taxonomy" } ] }, { "name": "zinc ion-binding protein", "type": "synonym", "evidence": [ { "id": "NP_191611", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191611" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M207", "url": "https://www.uniprot.org/uniprotkb/Q9M207" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M207", "locus": {} } ], "crossref": [ { "id": "AT3G60520", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G60520", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825223", "url": "https://www.ncbi.nlm.nih.gov/gene/825223", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR056874", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056874", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60520", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60520", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EYSSANQ", "url": "https://omabrowser.org/oma/group/EYSSANQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LS63", "url": "https://www.orthodb.org/?gene=A0A1I9LS63", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M207", "url": "https://www.orthodb.org/?gene=Q9M207", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33779", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33779", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33779:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33779:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25054", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25054", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191611", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191611", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60520", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60520", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LS63", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LS63-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS63-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M207", "url": "https://www.uniprot.org/uniprotkb/Q9M207", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M207-1", "url": "https://www.uniprot.org/uniprotkb/Q9M207-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWCQCEAKSRTGAKHGVNGGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKTGVPSPRPATRRYKLLKDVMC", "length": 129, "header": "tr|Q9M207-1|Q9M207_ARATH Isoform 1 of Zinc ion-binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M207-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LS63-1", "url": "https://www.uniprot.org/uniprotkb/Q9M207/entry#A0A1I9LS63-1", "sequence": { "sequence": "MCVIYSSSCIFTAYNTDLDRSRRYCSSYYKEQADPIKICDWCQCEAKSRTGAKHGVNGGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKTGVPSPRPATRRYKLLKDVMC", "length": 118, "header": "tr|A0A1I9LS63-1|A0A1I9LS63_ARATH Computationally mapped isoform of Zinc ion-binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M207-1" }, "locus": { "chromosome": "3", "start_pos": 22361530, "end_pos": 22362359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60520.2", "url": "https://www.ensemblgenomes.org/id/AT3G60520.2" }, { "database": "Ensembl Peptide", "id": "AT3G60520.2", "url": "https://www.ensemblgenomes.org/id/AT3G60520.2" } ] } }, { "isoform_ac": "Q9M207-1", "url": "https://www.uniprot.org/uniprotkb/Q9M207/entry#Q9M207-1", "sequence": { "sequence": "MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWCQCEAKSRTGAKHGVNGGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKTGVPSPRPATRRYKLLKDVMC", "length": 129, "header": "tr|Q9M207-1|Q9M207_ARATH Isoform 1 of Zinc ion-binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M207-1" }, "locus": { "chromosome": "3", "start_pos": 22361431, "end_pos": 22362579, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G60520.1", "url": "https://www.ensemblgenomes.org/id/AT3G60520.1" }, { "database": "Ensembl Peptide", "id": "AT3G60520.1", "url": "https://www.ensemblgenomes.org/id/AT3G60520.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M207", "url": "https://www.uniprot.org/uniprotkb/Q9M207" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M207", "url": "https://www.uniprot.org/uniprotkb/Q9M207" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60520", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60520", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "Q9M207", "url": "https://www.uniprot.org/uniprotkb/Q9M207" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M207", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M207" }, { "id": "PF25054", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25054" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PHD-type zinc finger plants", "eco_id": "ECO_0000259", "start_pos": 10, "end_pos": 53, "start_aa": "Cys", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M212-1", "uniprot_ac": "Q9M212", "uniprot_id": "Q9M212_ARATH", "mass": { "chemical_mass": 62784.0, "monoisotopic_mass": 62784.0 }, "refseq": { "ac": "NP_191606", "name": "transmembrane protein, putative (DUF247)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191606" }, "gene_names": [], "protein_names": [ { "name": "Transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "Q9M212", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M212/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "NP_191606", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191606" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M212", "url": "https://www.uniprot.org/uniprotkb/Q9M212" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M212", "locus": {} } ], "crossref": [ { "id": "AT3G60470", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G60470", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825218", "url": "https://www.ncbi.nlm.nih.gov/gene/825218", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004158", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004158", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G60470", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60470", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31170:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03140", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03140", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191606", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191606", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G60470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M212", "url": "https://www.uniprot.org/uniprotkb/Q9M212", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M212-1", "url": "https://www.uniprot.org/uniprotkb/Q9M212-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRRLNHEPDTVLELNESTPGMWWFPTNPEHRCIYRVPDRLRRVNPEAYTPQLLLIGPLHHSLKFQALNSRGDITNTKLMGYLNMEEHKKIYLARFSERLAGQKTIDELRRRIKEEEDIIRASYSESTAWIESPKFVDMILHDSVFIIEFLLRSKDYTLLEDQGSCIKKTWDPIFEQPCLQTTVDEDLILLENQLPYFILEKLFDPIVPILRPNQTLRQIVITYFRFQGNIGVDSRFRHFTDLFRCVRVETLRPKMPKNKFRYLVGLFRFVHLGTHGSRELEKSRPQEHKALRMEKTHGSGEPTKSTFRYIADLFRCVPMETLGSKREEKSRLERLKTHRMEETSHGHGSKKTKELPIIKHMYNAAKLQSAGVKFKAVTDEFSIDVTFENGCLKIPCLWVPDDAEITLRNIMALEQCHYPFKAYVCNFVSFLDFLIDTDKDVDLLMENGILNNWGEKSSVAVAEMVNTLFSGVVESRSYYAGIASRVNAYYENPVNRSRTILGRQYFGNLWRGTATVAAALLLVMTLIQTVASILQVMQK", "length": 540, "header": "tr|Q9M212-1|Q9M212_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M212-1" }, "isoforms": [ { "isoform_ac": "Q9M212-1", "url": "https://www.uniprot.org/uniprotkb/Q9M212/entry#Q9M212-1", "sequence": { "sequence": "MNRRLNHEPDTVLELNESTPGMWWFPTNPEHRCIYRVPDRLRRVNPEAYTPQLLLIGPLHHSLKFQALNSRGDITNTKLMGYLNMEEHKKIYLARFSERLAGQKTIDELRRRIKEEEDIIRASYSESTAWIESPKFVDMILHDSVFIIEFLLRSKDYTLLEDQGSCIKKTWDPIFEQPCLQTTVDEDLILLENQLPYFILEKLFDPIVPILRPNQTLRQIVITYFRFQGNIGVDSRFRHFTDLFRCVRVETLRPKMPKNKFRYLVGLFRFVHLGTHGSRELEKSRPQEHKALRMEKTHGSGEPTKSTFRYIADLFRCVPMETLGSKREEKSRLERLKTHRMEETSHGHGSKKTKELPIIKHMYNAAKLQSAGVKFKAVTDEFSIDVTFENGCLKIPCLWVPDDAEITLRNIMALEQCHYPFKAYVCNFVSFLDFLIDTDKDVDLLMENGILNNWGEKSSVAVAEMVNTLFSGVVESRSYYAGIASRVNAYYENPVNRSRTILGRQYFGNLWRGTATVAAALLLVMTLIQTVASILQVMQK", "length": 540, "header": "tr|Q9M212-1|Q9M212_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M212-1" }, "locus": { "chromosome": "3", "start_pos": 22344758, "end_pos": 22347121, "strand": "+", "evidence": [ { "database": 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White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M212", "url": "https://www.uniprot.org/uniprotkb/Q9M212" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M212", "url": "https://www.uniprot.org/uniprotkb/Q9M212" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G60470", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G60470", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M212", "url": "https://www.uniprot.org/uniprotkb/Q9M212" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 214, "end_pos": 216, "annotation": "n_glycosylation_sequon" }, { "start_pos": 496, "end_pos": 498, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], 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H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M217", "url": "https://www.uniprot.org/uniprotkb/Q9M217" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan 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"id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser442" }, { "start_pos": 449, "end_pos": 449, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M221", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M221" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser449" }, { "start_pos": 496, "end_pos": 496, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M221", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M221" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser496" }, { "start_pos": 594, "end_pos": 594, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", 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M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M237/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M237", "locus": {} } ], "crossref": [ { "id": "Q9M237", "url": "https://alphafold.ebi.ac.uk/entry/Q9M237", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G43530", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G43530", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "IPR005048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PF03384", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03384", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M237", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M237", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT3G43530", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G43530", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M237-1", "url": "https://www.uniprot.org/uniprotkb/Q9M237-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARTKNAGVPLAAEVVSQTINDEVVVASAAEVDSEATNLISNDDRADSDEETEALQPLKMYFGPSDYTKPFKITAKCYLHKAVGLLESHLEESELKWFLEHPQFKHFFHMHKDPNHKVMGMWLLFIRTTCLDKKGSMVYCQWRTDPMFGPGATIQYPDVEKKLLSMKKPSEARLRVVVLYFLCNRWKGVVADLELCKTFPWGKNAFEENYLAFEAIPVLRKNFCEDIESADPQCPRMCKMKFKSSTMKGFPMSDVYDKLGTTKSILAPTPDENLLLKRIMDKECGVNDVDDLIADGWKKRLVDEERTICFEPLFNEDVAHQSFVANNAPSTVVQAPRKAAVEKKGKGKTAAALTSPSDEGLTEVVNEMKNLMENGFKSMNKRMTNFSKKYEEQDKRLKLMETAIKSIQSSTGTDDAYGSKEIDDRENELEEGSDANGGDNEREVREKETEIDKEVAQGDNEREVGEKETEIDKEVGQGDSDIFDGNKDMELNKEVAESTIGVAESEKDKEVTESEKDKEVAESEIGVPESEKDIEVADSEKDKEVPQDDEMDGGKVTEPSKKRGKSHDDGDDPSEGCVKKPKVVKKVAKSRTDAKPVYRSPIQTRYARKKTKKNV", "length": 615, "header": "sp|Q9M237-1|Y3353_ARATH Isoform 1 of Uncharacterized protein At3g43530 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M237-1" }, "isoforms": [ { "isoform_ac": "Q9M237-1", "url": "https://www.uniprot.org/uniprotkb/Q9M237/entry#Q9M237-1", "sequence": { "sequence": "MARTKNAGVPLAAEVVSQTINDEVVVASAAEVDSEATNLISNDDRADSDEETEALQPLKMYFGPSDYTKPFKITAKCYLHKAVGLLESHLEESELKWFLEHPQFKHFFHMHKDPNHKVMGMWLLFIRTTCLDKKGSMVYCQWRTDPMFGPGATIQYPDVEKKLLSMKKPSEARLRVVVLYFLCNRWKGVVADLELCKTFPWGKNAFEENYLAFEAIPVLRKNFCEDIESADPQCPRMCKMKFKSSTMKGFPMSDVYDKLGTTKSILAPTPDENLLLKRIMDKECGVNDVDDLIADGWKKRLVDEERTICFEPLFNEDVAHQSFVANNAPSTVVQAPRKAAVEKKGKGKTAAALTSPSDEGLTEVVNEMKNLMENGFKSMNKRMTNFSKKYEEQDKRLKLMETAIKSIQSSTGTDDAYGSKEIDDRENELEEGSDANGGDNEREVREKETEIDKEVAQGDNEREVGEKETEIDKEVGQGDSDIFDGNKDMELNKEVAESTIGVAESEKDKEVTESEKDKEVAESEIGVPESEKDIEVADSEKDKEVPQDDEMDGGKVTEPSKKRGKSHDDGDDPSEGCVKKPKVVKKVAKSRTDAKPVYRSPIQTRYARKKTKKNV", "length": 615, "header": "sp|Q9M237-1|Y3353_ARATH Isoform 1 of Uncharacterized protein At3g43530 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M237-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 48, "end_pos": 48, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "Q9M237", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M237" } ], "site_lbl": "Ser48" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "Journal of proteomics", "date": "2009-04-13", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237" }, { "database": "iPTMnet", "id": "Q9M237", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M237" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M237", "url": "https://www.uniprot.org/uniprotkb/Q9M237" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 385, "end_pos": 387, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9M237-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 615, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9M237-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9M237" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 48 ], "sequon_annotation_sites": [ { "start_pos": 385, "end_pos": 387 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M240-1", "uniprot_ac": "Q9M240", "uniprot_id": "Q9M240_ARATH", "mass": { "chemical_mass": 16941.0, "monoisotopic_mass": 16941.0 }, "refseq": { "ac": "NP_189936", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189936" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M240", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M240/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_189936", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189936" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M240", "url": "https://www.uniprot.org/uniprotkb/Q9M240" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M240", "locus": {} } ], "crossref": [ { "id": "AT3G43500", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G43500", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823436", "url": "https://www.ncbi.nlm.nih.gov/gene/823436", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G43500", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43500", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_189936", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189936", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G43500", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G43500", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M240", "url": "https://www.uniprot.org/uniprotkb/Q9M240", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M240-1", "url": "https://www.uniprot.org/uniprotkb/Q9M240-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDIRMRADIAADGLTDRPPDRLADEPAEELSHGLLEGLSKEPADELADSPFLLDEPPDYFEDFLLFIFTLMKTTSCLGVAKTTHKLFLCVEPTKEKVAFSDKATSFSAPIEILLFNLDPPSIQGYLRRPLSLKDLHISSARIIDAPLLKPNG", "length": 153, "header": "tr|Q9M240-1|Q9M240_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M240-1" }, "isoforms": [ { "isoform_ac": "Q9M240-1", "url": "https://www.uniprot.org/uniprotkb/Q9M240/entry#Q9M240-1", "sequence": { "sequence": "MSDIRMRADIAADGLTDRPPDRLADEPAEELSHGLLEGLSKEPADELADSPFLLDEPPDYFEDFLLFIFTLMKTTSCLGVAKTTHKLFLCVEPTKEKVAFSDKATSFSAPIEILLFNLDPPSIQGYLRRPLSLKDLHISSARIIDAPLLKPNG", "length": 153, "header": "tr|Q9M240-1|Q9M240_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M240-1" }, "locus": { "chromosome": "3", "start_pos": 15400257, "end_pos": 15400718, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G43500.1", "url": "https://www.ensemblgenomes.org/id/AT3G43500.1" }, { "database": "Ensembl Peptide", "id": "AT3G43500.1", "url": "https://www.ensemblgenomes.org/id/AT3G43500.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T 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"https://www.ensemblgenomes.org/id/AT3G43480.1" }, { "database": "Ensembl Peptide", "id": "AT3G43480.1", "url": "https://www.ensemblgenomes.org/id/AT3G43480.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M242", "url": "https://www.uniprot.org/uniprotkb/Q9M242" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M242", "url": "https://www.uniprot.org/uniprotkb/Q9M242" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G43480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43480", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M242", "url": "https://www.uniprot.org/uniprotkb/Q9M242" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M243-1", "uniprot_ac": "Q9M243", "uniprot_id": "Q9M243_ARATH", "mass": { "chemical_mass": 52363.0, "monoisotopic_mass": 52363.0 }, "refseq": { "ac": "NP_189933", "name": "zinc ion binding / nucleic acid binding protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189933" }, "gene_names": [], "protein_names": [ { "name": "Zinc ion binding / nucleic acid binding protein", "type": "synonym", "evidence": [ { "id": "Q9M243", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M243/entry#names_and_taxonomy" } ] }, { "name": "zinc ion binding / nucleic acid binding protein", "type": "synonym", "evidence": [ { "id": "NP_189933", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189933" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M243", "url": "https://www.uniprot.org/uniprotkb/Q9M243" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M243", "locus": {} } ], "crossref": [ { "id": "AT3G43470", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G43470", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "823432", "url": "https://www.ncbi.nlm.nih.gov/gene/823432", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G43470", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43470", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_189933", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189933", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G43470", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G43470", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M243", "url": "https://www.uniprot.org/uniprotkb/Q9M243", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M243-1", "url": "https://www.uniprot.org/uniprotkb/Q9M243-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METIEYSSSDEEDSYGYSQDSYYNETRFVESWHDDGYSSGSDFEEEPYGGAPEPEPPDRYSSSYTTPSYPKPKIRMWENLKWIMYEKYCPQCLNQGRKTTFPPKQAIQGDKMPKTTLNLTEKSWCKGQGHIAKDCPTKKSSPRQEPTLCLHPQVLQKQVDVSTLQHDQVQTEACQIDYNVPMTLLMHLSSAKSIEKVSGTKEIIKDQGKVSTMEKVFTKETQNQGELTLKKVVVNKDESVKDIIPIKEEPPNAQQFLQTQCKLLNPYTLQWSNLTYLCVGKQVLRTKPLEEGGDNVRMGADVPADALVDRLLVRLLDGLSDGLPEVLHVSNQLVRTKESYPFLPFCASQSHIWKPGDPLRHPEPFTLNPWCIFPYVNPLSEDFPFPDLNEIKSQRLYFDHLLGIKKPPTMTLDVPKSHHFQPKLSRLKTHHKFPYLADFVTKVPTAIFSFIVAISLLL", "length": 458, "header": "tr|Q9M243-1|Q9M243_ARATH Isoform 1 of Zinc ion binding / nucleic acid binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M243-1" }, "isoforms": [ { "isoform_ac": "Q9M243-1", "url": "https://www.uniprot.org/uniprotkb/Q9M243/entry#Q9M243-1", "sequence": { "sequence": "METIEYSSSDEEDSYGYSQDSYYNETRFVESWHDDGYSSGSDFEEEPYGGAPEPEPPDRYSSSYTTPSYPKPKIRMWENLKWIMYEKYCPQCLNQGRKTTFPPKQAIQGDKMPKTTLNLTEKSWCKGQGHIAKDCPTKKSSPRQEPTLCLHPQVLQKQVDVSTLQHDQVQTEACQIDYNVPMTLLMHLSSAKSIEKVSGTKEIIKDQGKVSTMEKVFTKETQNQGELTLKKVVVNKDESVKDIIPIKEEPPNAQQFLQTQCKLLNPYTLQWSNLTYLCVGKQVLRTKPLEEGGDNVRMGADVPADALVDRLLVRLLDGLSDGLPEVLHVSNQLVRTKESYPFLPFCASQSHIWKPGDPLRHPEPFTLNPWCIFPYVNPLSEDFPFPDLNEIKSQRLYFDHLLGIKKPPTMTLDVPKSHHFQPKLSRLKTHHKFPYLADFVTKVPTAIFSFIVAISLLL", "length": 458, "header": "tr|Q9M243-1|Q9M243_ARATH Isoform 1 of Zinc ion binding / nucleic acid binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M243-1" }, "locus": { "chromosome": "3", "start_pos": 15391568, "end_pos": 15393281, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G43470.1", "url": "https://www.ensemblgenomes.org/id/AT3G43470.1" }, { "database": "Ensembl Peptide", "id": "AT3G43470.1", "url": "https://www.ensemblgenomes.org/id/AT3G43470.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 100, "end_pos": 100, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M243", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M243" } ], "site_lbl": "Thr100" }, { "start_pos": 99, "end_pos": 99, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M243", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M243" } ], "site_lbl": "Thr99" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M243", "url": "https://www.uniprot.org/uniprotkb/Q9M243" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M243", "url": "https://www.uniprot.org/uniprotkb/Q9M243" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G43470", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G43470", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M243", "url": "https://www.uniprot.org/uniprotkb/Q9M243" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 118, "end_pos": 120, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 273, "end_pos": 275, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], 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Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9M2A1", "url": "https://www.uniprot.org/uniprotkb/Q9M2A1" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.", "journal": "Plant Cell", "date": "2004", "authors": "Lurin Claire, Andr\u00e9s Charles, Aubourg S\u00e9bastien, Bellaoui Mohammed, Bitton Fr\u00e9d\u00e9rique, Bruy\u00e8re Cl\u00e9mence, Caboche Michel, Debast C\u00e9drig, Gualberto Jos\u00e9, Hoffmann Beate, Lecharny Alain, Le Ret Monique, Martin-Magniette Marie-Laure, Mireau Hakim, Peeters Nemo, Renou Jean-Pierre, Szurek Boris, Taconnat Ludivine, Small Ian", "evidence": [ { "database": "UniProtKB", "id": "Q9M2A1", 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"MERNCRRNLEREGINGIGCVWVFISLFGSNQKRLLMDNKRGSKRVSGNEMKQITCSCESSHESVDEEDIHVSVAGDEHVETEVCKSLVDESEEKFKEIIKRLIAQKEGEIQTCKDLLEAFHVLGSEEEESFLKKKLSNEDAQTLGDSKRVEEEKPEVVSKQEAVVIPKRKANFFSRKWKSEERRNRSQVAKTIVVLKPGPNTLDVDSSTGLHSTANKSKTGRTFSRFLIGLVKRRLQSAVGKKSCDVSVDKRSQNCSTQEEIQSKSEEKHDVSDKEEPFCDERTTEDGKEETIYSSEDSKKIMSGLYIAAKKHLSEMLANGDIDVNLPDKEVPRILGKILSLPEFCSPADSPRLIPAHDLVSTLSQTTEQPEILQTPETSSATNDLIDEDSDKDDDTLFTIDVSVPRDYGNETENIDNDEESEIDPLSETCSSSVSREVENVDEDVEKEMLNHQAHSPASPLESPTTCSVRLTECKETATDAQGKLSPVSVLETLFTDDDSSPTTSTSFSSAGMRMQPLCIRFDEVDSPKPEKDNNVEATIDDKELTLAYIEAVVKSAALSWEELLTRPFYSEQLLELELTDGIVFSSTQLCDDKNLLYDCINEVLMDFCWNEFNPGPWISFVKPEVQLISDMEIAAKVAQEGVYWHLQPLPFPHTLDQIVKKDMARTGSWMDLRFEIGCLGSYTSEMILDELVEEIIMSCRDMVQVEPMQEPSSDNL", "length": 718, "header": "tr|Q9M2C6-1|Q9M2C6_ARATH Isoform 1 of Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM14 PE=1 SV=1 CANONICAL=Q9M2C6-1" }, "isoforms": [ { "isoform_ac": "Q9M2C6-1", "url": 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CANONICAL=Q9M2C6-1" }, "locus": { "chromosome": "3", "start_pos": 22708769, "end_pos": 22711582, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61380.3", "url": "https://www.ensemblgenomes.org/id/AT3G61380.3" }, { "database": "Ensembl Peptide", "id": "AT3G61380.3", "url": "https://www.ensemblgenomes.org/id/AT3G61380.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2C6" } ], "site_lbl": "Ser137" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, 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Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C6", "url": "https://www.uniprot.org/uniprotkb/Q9M2C6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C6", "url": 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Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C7", "url": "https://www.uniprot.org/uniprotkb/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C7", "url": "https://www.uniprot.org/uniprotkb/Q9M2C7" }, { "database": "iPTMnet", "id": "Q9M2C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9M2C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M2C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C7", "url": "https://www.uniprot.org/uniprotkb/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9M2C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2C7" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G61370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M2C7", "url": "https://www.uniprot.org/uniprotkb/Q9M2C7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 103 ], "sequon_annotation_sites": [ { "start_pos": 122, "end_pos": 124 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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"IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G61340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DYRREIH", "url": "https://omabrowser.org/oma/group/DYRREIH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LRT9", "url": "https://www.orthodb.org/?gene=A0A1I9LRT9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M2D0", "url": "https://www.orthodb.org/?gene=Q9M2D0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF132", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF132", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M2D0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M2D0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191693", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191693", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LRT9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRT9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LRT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRT9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2D0", "url": "https://www.uniprot.org/uniprotkb/Q9M2D0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2D0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2D0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMTRRKKRSCSNQKKEEEKSERIPFDLVIEILLRLPVKSIARFRYVSKLWQSTLRGQHFTESYLTISSSRPKILFTCLKDCETFFFSSPHPQDLSPIAANLHMSFPISCPSNICRPVRGWLCGLHQRTTKGTTVTEPLICNPSTGESVVLRKVKTRRKGVISFLGFDPIDKNFKVLCMTRSCIGRADSEEHQVHTLETGKKPSRKMIECDILHYPVPVEHTNGFSQYDGVCINGVLYYLAIVHGVSDDRYPDVVCFEFGSDKFKYIKKVAGHDMEILYLGRRLNSILVNYKGKLAKLQPNMPNNVCTGIQLWVLEDAEKHEWSSHIYVLPPPWRNVYEETKLCFVGTTRKGEIVLSPNTISDFFYLLYYNPDRNTITIVKIKGMETFQSHKAYTFLDHLEDVNLVPIWRM", "length": 410, "header": "sp|Q9M2D0-1|FB214_ARATH Isoform 1 of F-box protein At3g61340 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M2D0-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LRT9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2D0/entry#A0A1I9LRT9-1", "sequence": { "sequence": "MIIIRFNQTEGRKKVIRVLREAASTMMTRRKKRSCSNQKKEEEKSERIPFDLVIEILLRLPVKSIARFRYVSKLWQSTLRGQHFTESYLTISSSRPKILFTCLKDCETFFFSSPHPQDLSPIAANLHMSFPISCPSNICRPVRGWLCGLHQRTTKGTTVTEPLICNPSTGESVVLRKVKTRRKGVISFLGFDPIDKNFKVLCMTRSCIGRADSEEHQVHTLETGKKPSRKMIECDILHYPVPVEHTNGFSQYDGVCINGVLYYLAIVHGVSDDRYPDVVCFEFGSDKFKYIKKVAGHDMEILYLGRRLNSILVNYKGKLAKLQPNMPNNVCTGIQLWVLEDAEKHEWSSHIYVLPPPWRNVYEETKLCFVGTTRKGEIVLSPNTISDFFYLLYYNPDRNTITIVKIKGMETFQSHKAYTFLDHLEDVNLVPIWRM", "length": 435, "header": "tr|A0A1I9LRT9-1|A0A1I9LRT9_ARATH Computationally mapped isoform of F-box and associated interaction domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2D0-1" }, "locus": { "chromosome": "3", "start_pos": 22701034, "end_pos": 22702530, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61340.2", "url": "https://www.ensemblgenomes.org/id/AT3G61340.2" }, { "database": "Ensembl Peptide", "id": "AT3G61340.2", "url": "https://www.ensemblgenomes.org/id/AT3G61340.2" } ] } }, { "isoform_ac": "Q9M2D0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2D0/entry#Q9M2D0-1", "sequence": { "sequence": "MMTRRKKRSCSNQKKEEEKSERIPFDLVIEILLRLPVKSIARFRYVSKLWQSTLRGQHFTESYLTISSSRPKILFTCLKDCETFFFSSPHPQDLSPIAANLHMSFPISCPSNICRPVRGWLCGLHQRTTKGTTVTEPLICNPSTGESVVLRKVKTRRKGVISFLGFDPIDKNFKVLCMTRSCIGRADSEEHQVHTLETGKKPSRKMIECDILHYPVPVEHTNGFSQYDGVCINGVLYYLAIVHGVSDDRYPDVVCFEFGSDKFKYIKKVAGHDMEILYLGRRLNSILVNYKGKLAKLQPNMPNNVCTGIQLWVLEDAEKHEWSSHIYVLPPPWRNVYEETKLCFVGTTRKGEIVLSPNTISDFFYLLYYNPDRNTITIVKIKGMETFQSHKAYTFLDHLEDVNLVPIWRM", "length": 410, "header": "sp|Q9M2D0-1|FB214_ARATH Isoform 1 of F-box protein At3g61340 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M2D0-1" }, "locus": { "chromosome": "3", "start_pos": 22701054, "end_pos": 22702481, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61340.1", "url": "https://www.ensemblgenomes.org/id/AT3G61340.1" }, { "database": "Ensembl Peptide", "id": "AT3G61340.1", "url": 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"title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2E3-1", "uniprot_ac": "Q9M2E3", "uniprot_id": "Q9M2E3_ARATH", "mass": { "chemical_mass": 29567.0, "monoisotopic_mass": 29567.0 }, "refseq": { "ac": "NP_191680", "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191680" }, "gene_names": [], "protein_names": [ { "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191680", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191680" }, { "id": "Q9M2E3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", 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Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FSAVHWF", "url": "https://omabrowser.org/oma/group/FSAVHWF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M2E3", "url": "https://www.orthodb.org/?gene=Q9M2E3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44575", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44575", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44575:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44575:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08241", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191680", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191680", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2E3", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2E3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQLAALSGKQADEYLNARPKYPTIWYKVLAGRTSNHKVAWDVGTGNGQAAIGVAEYYQKVVATDINESQLQRAMKHPKVTYYHTPSSMSDDDLVTLLGGENSIDIIIAAQALHYFDLKRFYPIVKRVLRKQGGIIVVWVYNDLIITPKVDSIMKRLVDSTLPYRNPTMNLAFDGYKTIEFPFKNIRMGTQGRPKALDIPHMLSLDGFLGFLKSWQPLVKAKEQGEDLLTSYMIDEFKEAWGDDEQVKDVHYKAFMLAGKL", "length": 261, "header": "tr|Q9M2E3-1|Q9M2E3_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E3-1" }, "isoforms": [ { "isoform_ac": "Q9M2E3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3/entry#Q9M2E3-1", "sequence": { "sequence": "MAQLAALSGKQADEYLNARPKYPTIWYKVLAGRTSNHKVAWDVGTGNGQAAIGVAEYYQKVVATDINESQLQRAMKHPKVTYYHTPSSMSDDDLVTLLGGENSIDIIIAAQALHYFDLKRFYPIVKRVLRKQGGIIVVWVYNDLIITPKVDSIMKRLVDSTLPYRNPTMNLAFDGYKTIEFPFKNIRMGTQGRPKALDIPHMLSLDGFLGFLKSWQPLVKAKEQGEDLLTSYMIDEFKEAWGDDEQVKDVHYKAFMLAGKL", "length": 261, "header": "tr|Q9M2E3-1|Q9M2E3_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E3-1" }, "locus": { "chromosome": "3", "start_pos": 22658632, "end_pos": 22659896, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61210.1", "url": "https://www.ensemblgenomes.org/id/AT3G61210.1" }, { "database": "Ensembl Peptide", "id": "AT3G61210.1", "url": "https://www.ensemblgenomes.org/id/AT3G61210.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E3", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E3", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G61210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61210", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YKG3-1", "protein_name": "Methyltransferase type 11 domain-containing protein", "gene_name": "LOC424014", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MATQMFEGTQHAAVYLKYRFAPGKELKDIILAYLQEKAPSCTQLAVDVGCGSGQGTAFLADRFAKVVGTDISQAQIQEAKAAPSPPNISYLITRCYSSPPICRVCPAEELPFEDGSVDLLASFTAAHWFDIGKFMNEVKRVLRPGGCVAISTYTIDMSLHYRDCSEKLTQIFREAWDQLLKYSHSRIKHVLEDYKEIFEALPFPDKKRITNIYDKIPMTVAGVVGYLESASPYQVFMKNDPEAAKTLLPGMEKRLLETMGAPSRDTPLEFWVRHVCILGHKEA", "length": 283 }, "evidence": [ { "id": "Q9M2E3", "url": "https://omabrowser.org/oma/group/Q9M2E3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q54JJ5-1", "protein_name": "Methyltransferase type 11 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTSEKPKEFQDKFGTVGKSYKTFRPTYTEELYSIIDSYCDSKRDLAIDCGCGSGQATVKLAKYFKKVIGFEPSQGQIENAVKTENVDFRLSPAEKIDLPSGSVDLITVATAVHWFDLPVFYQEAKRLLRDNGSLILFTTGFIQILNNDEAQKINDNFRSGTLGDYWAPIVKYVIDGYVDIKPPFENVERKTISLPKLMSVNDVIGIYSSWSGYASFIKAGNNDVLPGVKENLMSAFKTTDPNAEIVETNFPVYMVLSKK", "length": 259 }, "evidence": [ { "id": "Q9M2E3", "url": "https://omabrowser.org/oma/group/Q9M2E3/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E3", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E3", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M2E3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2E3" }, { "id": "PF08241", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Methyltransferase type 11", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 136, "start_aa": "Asp", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 67, "end_pos": 69 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { 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0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2E4-1", "uniprot_ac": "Q9M2E4", "uniprot_id": "Q9M2E4_ARATH", "mass": { "chemical_mass": 20474.0, "monoisotopic_mass": 20474.0 }, "refseq": { "ac": "NP_191679", "name": "Thioesterase superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191679" }, "gene_names": [], "protein_names": [ { "name": "Thioesterase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191679", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191679" }, { "id": "Q9M2E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4", "locus": {} } ], "crossref": [ { "id": "cd03443", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03443", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825292", "url": "https://www.ncbi.nlm.nih.gov/gene/825292", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029069", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029069", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039298", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039298", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G61200", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61200", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FKIKETM", "url": "https://omabrowser.org/oma/group/FKIKETM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M2E4", "url": "https://www.orthodb.org/?gene=Q9M2E4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21660", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21660", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21660:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21660:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03061", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03061", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191679", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191679", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61200", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61200", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2E4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNWAKFRETGSPEDTDMSSTPISSDTTAVSKVIDPNYVLMVADFFKAISPDESCNDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL", "length": 188, "header": "tr|Q9M2E4-1|Q9M2E4_ARATH Isoform 1 of Thioesterase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E4-1" }, "isoforms": [ { "isoform_ac": "Q9M2E4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4/entry#Q9M2E4-1", "sequence": { "sequence": "MNWAKFRETGSPEDTDMSSTPISSDTTAVSKVIDPNYVLMVADFFKAISPDESCNDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL", "length": 188, "header": "tr|Q9M2E4-1|Q9M2E4_ARATH Isoform 1 of Thioesterase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E4-1" }, "locus": { "chromosome": "3", "start_pos": 22657455, "end_pos": 22658582, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61200.1", "url": "https://www.ensemblgenomes.org/id/AT3G61200.1" }, { "database": "Ensembl Peptide", "id": "AT3G61200.1", "url": "https://www.ensemblgenomes.org/id/AT3G61200.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 88, "start_aa": "Thr", "end_pos": 88, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr88", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.", "journal": "Mol. Cell. Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G61200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61200", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "fatty acyl-CoA hydrolase activity", "id": "GO:0047617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047617", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E4", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 156, "end_pos": 158, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M2E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2E4" }, { "id": "PF03061", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03061" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Thioesterase", "eco_id": "ECO_0000259", "start_pos": 98, "end_pos": 172, "start_aa": "Leu", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 88 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 156, "end_pos": 158 }, { "start_pos": 69, "end_pos": 71 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2E7-1", "uniprot_ac": "Q9M2E7", "uniprot_id": "Q9M2E7_ARATH", "mass": { "chemical_mass": 87739.0, "monoisotopic_mass": 87739.0 }, "refseq": { "ac": "NP_191676", "name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191676" }, "gene_names": [], "protein_names": [ { "name": 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] }, { "id": "825289", "url": "https://www.ncbi.nlm.nih.gov/gene/825289", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032867", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032867", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046848", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046848", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046960", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046960", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G61170", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61170", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HVLWTAM", "url": "https://omabrowser.org/oma/group/HVLWTAM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47926", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47926", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47926:SF347", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47926:SF347", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14432", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14432", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191676", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191676", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61170", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2E7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHRLNYRKWRLPLKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLLVTFAIEGKLGKFCISVCNNESYKVTNLQLYTFKLLVDVVAEVSEGS", "length": 783, "header": "tr|Q9M2E7-1|Q9M2E7_ARATH Isoform 1 of Tetratricopeptide repeat (TPR)-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E7-1" }, "isoforms": [ { 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(TPR)-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2E7-1" }, "locus": { "chromosome": "3", "start_pos": 22638691, "end_pos": 22641359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61170.1", "url": "https://www.ensemblgenomes.org/id/AT3G61170.1" }, { "database": "Ensembl Peptide", "id": "AT3G61170.1", "url": "https://www.ensemblgenomes.org/id/AT3G61170.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 529, "start_aa": "Thr", "end_pos": 529, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr529", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 661, "end_pos": 661, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2E7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2E7" } ], "site_lbl": "Tyr661" }, { "start_pos": 662, "end_pos": 662, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2E7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2E7" } ], "site_lbl": "Ser662" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G61170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9M2E7", "url": "https://www.uniprot.org/uniprotkb/Q9M2E7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 408, "end_pos": 410, "annotation": "n_glycosylation_sequon" }, { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 628, "end_pos": 630, "annotation": "n_glycosylation_sequon" }, { "start_pos": 756, "end_pos": 758, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"https://www.ncbi.nlm.nih.gov/gene/825023", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G58540", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58540", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_567070", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567070", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G58540", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G58540", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2G2", "url": "https://www.uniprot.org/uniprotkb/Q9M2G2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2G2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2G2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGAVARFAKWFGAIDVWTRVSVIGLPVAFGVLHQLEKENVRQKKLFQAQIDDLVAKGVIRFIEESE", "length": 67, "header": "tr|Q9M2G2-1|Q9M2G2_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2G2-1" }, "isoforms": [ { "isoform_ac": "Q9M2G2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2G2/entry#Q9M2G2-1", "sequence": { "sequence": "MAGAVARFAKWFGAIDVWTRVSVIGLPVAFGVLHQLEKENVRQKKLFQAQIDDLVAKGVIRFIEESE", "length": 67, "header": "tr|Q9M2G2-1|Q9M2G2_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2G2-1" }, "locus": { "chromosome": "3", "start_pos": 21648561, "end_pos": 21649390, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58540.1", "url": "https://www.ensemblgenomes.org/id/AT3G58540.1" }, { "database": "Ensembl Peptide", "id": "AT3G58540.1", "url": "https://www.ensemblgenomes.org/id/AT3G58540.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", 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P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2G2", "url": "https://www.uniprot.org/uniprotkb/Q9M2G2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar 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"MAKPFDKKFGWVIKDFSSLQSEKCCSVPVLISESKWRLIVFPKGNNSEYFVRFYETKLTRESRQSLAFDEEIFGLVFMTSALTPFCFFFSFLEMARPHRPLSPFFIHSNILVSLSGKTEHCFDGKSTTWGFPAMLSLSKLHEKDGGFLVNGEVMIVAELDVFEVIGTLDESEKSEEASKLVTKKTENLGAESNELLKKTSPPKESNNVKQVENSVKTSPKNKRMWVTFLIIVFFLIGALGKAHEKHLAAKERNFSQNWKVIRPGLEALLSCSCLMLFYYYASLVFSFVCSFFVS", "length": 294, "header": "tr|Q9M2H4-1|Q9M2H4_ARATH Isoform 1 of TRAF-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2H4-1" }, "isoforms": [ { "isoform_ac": "Q9M2H4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2H4/entry#Q9M2H4-1", "sequence": { "sequence": "MAKPFDKKFGWVIKDFSSLQSEKCCSVPVLISESKWRLIVFPKGNNSEYFVRFYETKLTRESRQSLAFDEEIFGLVFMTSALTPFCFFFSFLEMARPHRPLSPFFIHSNILVSLSGKTEHCFDGKSTTWGFPAMLSLSKLHEKDGGFLVNGEVMIVAELDVFEVIGTLDESEKSEEASKLVTKKTENLGAESNELLKKTSPPKESNNVKQVENSVKTSPKNKRMWVTFLIIVFFLIGALGKAHEKHLAAKERNFSQNWKVIRPGLEALLSCSCLMLFYYYASLVFSFVCSFFVS", "length": 294, "header": "tr|Q9M2H4-1|Q9M2H4_ARATH Isoform 1 of TRAF-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2H4-1" }, "locus": { "chromosome": "3", "start_pos": 21609307, "end_pos": 21612409, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58420.1", "url": "https://www.ensemblgenomes.org/id/AT3G58420.1" }, { "database": "Ensembl Peptide", "id": "AT3G58420.1", "url": "https://www.ensemblgenomes.org/id/AT3G58420.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs 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"url": "https://www.uniprot.org/uniprotkb/Q9M2H5/entry#names_and_taxonomy" } ] }, { "name": "RTM3-like protein At3g58410", "type": "synonym", "evidence": [ { "id": "Q9M2H5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2H5/entry#names_and_taxonomy" } ] }, { "name": "TRAF-like family protein", "type": "synonym", "evidence": [ { "id": "NP_001326114", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326114" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2H5", "url": "https://www.uniprot.org/uniprotkb/Q9M2H5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2H5", "locus": {} } ], "crossref": [ { "id": "Q9M2H5", "url": "https://alphafold.ebi.ac.uk/entry/Q9M2H5", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G58410", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G58410", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00121", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00121", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825010", "url": "https://www.ncbi.nlm.nih.gov/gene/825010", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008974", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008974", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050804", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050804", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LIADCKW", "url": "https://omabrowser.org/oma/group/LIADCKW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF22486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M2H5", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M2H5", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001326114", "url": 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protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9M2H5-1" }, "isoforms": [ { "isoform_ac": "Q9M2H5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2H5/entry#Q9M2H5-1", "sequence": { "sequence": "MTKQVGKKFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFKSLPSGWRRYVKLRLYIVKQLSTLIRKTHRWFDQEMWGWGFLYMLPLTKLHDEKEGFLVNGELMIVAEVDALGFIDPLNESEESEDPTQPLKKIKLNDDGAVSSDLLEEASPRKESMEVNGFQVLPSQVESVRLIFERHPDIASEFRAKNQYLRKACMDFLLSLVETLCQSLQEFSNEDLVEADIALTYLKDAGFKVDWLEKKLDQVRDKKEKERSCLAKLQETEETLLKLKQKCTELDALMDTEKAELSAIRTPLSFEDVV", "length": 321, "header": "sp|Q9M2H5-1|MCC29_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9M2H5-1" }, "locus": { "chromosome": "3", "start_pos": 21604871, "end_pos": 21606166, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58410.2", "url": "https://www.ensemblgenomes.org/id/AT3G58410.2" }, { "database": "Ensembl Peptide", "id": "AT3G58410.2", "url": "https://www.ensemblgenomes.org/id/AT3G58410.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro 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1 of MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2I0-1" }, "isoforms": [ { "isoform_ac": "Q9M2I0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2I0/entry#Q9M2I0-1", "sequence": { "sequence": "MGKQLAKKITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYESLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGELKIVAEIEVLEVIGKLDVSEETSTIMESMDFNGFQLLPSQVDFVRHMFEKHPEIASEFRLKNPNLRAGYMSLLLSLIETLRQSPQELNKVDLAEGYVALRSITDAGFKVDWLEKKLVEISEKKNKEEAGETRMQEINEELESLKQKCLDLEAQLEKEKAEVFAAKSPLSFNDVF", "length": 298, "header": "sp|Q9M2I0-1|MCC25_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2I0-1" }, "locus": { "chromosome": "3", "start_pos": 21593505, "end_pos": 21594866, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58360.1", "url": "https://www.ensemblgenomes.org/id/AT3G58360.1" }, { "database": "Ensembl Peptide", "id": "AT3G58360.1", "url": "https://www.ensemblgenomes.org/id/AT3G58360.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, 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"https://www.uniprot.org/uniprotkb/Q9M2I0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "RTM3, which controls long-distance movement of potyviruses, is a member of a new plant gene family encoding a meprin and TRAF homology domain-containing protein.", "journal": "Plant Physiol.", "date": "2010", "authors": "Cosson Patrick, Sofer Luc, Le Quang Hien, L\u00e9ger Val\u00e9rie, Schurdi-Levraud Val\u00e9rie, Whitham Steven A, Yamamoto Miki L, Gopalan Suresh, Le Gall Olivier, Candresse Thierry, Carrington James C, Revers Fr\u00e9d\u00e9ric", "evidence": [ { "database": "UniProtKB", "id": "Q9M2I0", "url": "https://www.uniprot.org/uniprotkb/Q9M2I0" } ], "reference": [ { "type": "PubMed", "id": "20584941", "url": "https://glygen.org/publication/PubMed/20584941" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2I0", "url": "https://www.uniprot.org/uniprotkb/Q9M2I0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G58360", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58360", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M2I0", "url": "https://www.uniprot.org/uniprotkb/Q9M2I0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 15, "end_pos": 17, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2I2-1", "uniprot_ac": "Q9M2I2", "uniprot_id": "MCC23_ARATH", "mass": { "chemical_mass": 37278.0, "monoisotopic_mass": 37278.0 }, "refseq": { "ac": "NP_191393", "name": "TRAF-like family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191393" }, "gene_names": [ { "name": "F9D24.250", "type": "synonym", "evidence": [ { "id": "Q9M2I2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2" } ] } ], "protein_names": [ { "name": "MATH domain and coiled-coil domain-containing protein At3g58340", "type": "recommended", "evidence": [ { "id": "Q9M2I2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2/entry#names_and_taxonomy" } ] }, { "name": "RTM3-like protein At3g58340", "type": "synonym", "evidence": [ { "id": "Q9M2I2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2/entry#names_and_taxonomy" } ] }, { "name": "TRAF-like family protein", "type": "synonym", "evidence": [ { "id": "NP_191393", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191393" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2I2", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2", "locus": {} } ], "crossref": [ { "id": "Q9M2I2", "url": "https://alphafold.ebi.ac.uk/entry/Q9M2I2", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G58340", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G58340", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00121", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00121", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "825003", "url": "https://www.ncbi.nlm.nih.gov/gene/825003", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008974", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008974", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050804", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050804", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HRETNIW", "url": "https://omabrowser.org/oma/group/HRETNIW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF22486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M2I2", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M2I2", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191393", "url": 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"MAKAVDKKFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMIVAEVEFLEVIGTLDESEEIIKSSDLINKTQEVAQQVKEIIQPNDLINKTQEVAQQVKESIDVNGFQVLPSQVESVRRIFKKHPDIAVGFQVKNQHLRKTFMNFLVNVIETMCQSLQELSNEDLVEVDIALTYLKDAGFKVDWLEKKLDHVKEKKEKEQSGLIILQGIEQQLHELMHKCEKKKSEVLSVGAPLKFDDVV", "length": 325, "header": "sp|Q9M2I2-1|MCC23_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=3 CANONICAL=Q9M2I2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPK2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2/entry#A0A1I9LPK2-1", "sequence": { "sequence": "MAKAVDKKFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMIVAEVEFLEVIGTLDESEKTQEVAQQVKEIIQPNDLINKTQEVAQQVKESIDVNGFQVLPSQVESVRRIFKKHPDIAVGFQVKNQHLRKTFMNFLVNVIETMCQSLQELSNEDLVEVDIALTYLKDAGFKVDWLEKKLDHVKEKKEKEQSGLIILQGIEQQLHELMHKCEKKKSEVLSVGAPLKFDDVV", "length": 315, "header": "tr|A0A1I9LPK2-1|A0A1I9LPK2_ARATH Computationally mapped isoform of TRAF-like family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2I2-1" }, "locus": { "chromosome": "3", "start_pos": 21589071, "end_pos": 21590401, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58340.2", "url": "https://www.ensemblgenomes.org/id/AT3G58340.2" }, { "database": "Ensembl Peptide", "id": "AT3G58340.2", "url": "https://www.ensemblgenomes.org/id/AT3G58340.2" } ] } }, { "isoform_ac": "Q9M2I2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2I2/entry#Q9M2I2-1", "sequence": { "sequence": "MAKAVDKKFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMIVAEVEFLEVIGTLDESEEIIKSSDLINKTQEVAQQVKEIIQPNDLINKTQEVAQQVKESIDVNGFQVLPSQVESVRRIFKKHPDIAVGFQVKNQHLRKTFMNFLVNVIETMCQSLQELSNEDLVEVDIALTYLKDAGFKVDWLEKKLDHVKEKKEKEQSGLIILQGIEQQLHELMHKCEKKKSEVLSVGAPLKFDDVV", "length": 325, "header": "sp|Q9M2I2-1|MCC23_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=3 CANONICAL=Q9M2I2-1" }, "locus": { "chromosome": "3", "start_pos": 21589071, "end_pos": 21590401, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58340.1", "url": "https://www.ensemblgenomes.org/id/AT3G58340.1" }, { "database": "Ensembl Peptide", "id": "AT3G58340.1", "url": "https://www.ensemblgenomes.org/id/AT3G58340.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 64, "end_pos": 64, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2I2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2I2" } ], "site_lbl": "Ser64" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes 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"MGNPVDNKFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFLPSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKGGSLFHLSELTDKKSGFLVDGEVEIVAQITVLETDRRFHVSKDYNMEMQCWDGMATTLVENKELNDDDKAGLVNVKGFQVLPSQLGIVNRIFEKHPETALECCTKNQELRASYINVIFSLIKLLYKGAQEHSTHDLSDAEGALAYMKNLGFKLDWLEKKLDEVKEIKKKCERVTEMEKELHDLMNKHTNVSKLLEKEKLEIKNASAPDLSFSDVI", "length": 317, "header": "sp|Q9M2J2-1|MCC18_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58240 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2J2-1" }, "isoforms": [ { "isoform_ac": "Q9M2J2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2J2/entry#Q9M2J2-1", "sequence": { "sequence": "MGNPVDNKFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFLPSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKGGSLFHLSELTDKKSGFLVDGEVEIVAQITVLETDRRFHVSKDYNMEMQCWDGMATTLVENKELNDDDKAGLVNVKGFQVLPSQLGIVNRIFEKHPETALECCTKNQELRASYINVIFSLIKLLYKGAQEHSTHDLSDAEGALAYMKNLGFKLDWLEKKLDEVKEIKKKCERVTEMEKELHDLMNKHTNVSKLLEKEKLEIKNASAPDLSFSDVI", "length": 317, "header": "sp|Q9M2J2-1|MCC18_ARATH Isoform 1 of MATH domain and coiled-coil domain-containing protein At3g58240 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2J2-1" }, "locus": { "chromosome": "3", "start_pos": 21568459, "end_pos": 21569827, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G58240.1", "url": "https://www.ensemblgenomes.org/id/AT3G58240.1" }, { "database": "Ensembl Peptide", "id": "AT3G58240.1", "url": "https://www.ensemblgenomes.org/id/AT3G58240.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, 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Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2J2", "url": "https://www.uniprot.org/uniprotkb/Q9M2J2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "RTM3, which controls long-distance movement of potyviruses, is a member of a new plant gene family encoding a meprin and TRAF homology domain-containing protein.", "journal": "Plant Physiol.", "date": "2010", "authors": "Cosson Patrick, Sofer Luc, Le Quang Hien, L\u00e9ger Val\u00e9rie, Schurdi-Levraud Val\u00e9rie, Whitham Steven A, Yamamoto Miki L, Gopalan Suresh, Le Gall Olivier, Candresse Thierry, Carrington James C, Revers 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} ], "crossref": [ { "id": "824992", "url": "https://www.ncbi.nlm.nih.gov/gene/824992", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR050804", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050804", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G58230", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58230", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KNAYMNT", "url": "https://omabrowser.org/oma/group/KNAYMNT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M2J3", "url": "https://www.orthodb.org/?gene=Q9M2J3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46236:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46236:SF5", 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H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2J3", "url": "https://www.uniprot.org/uniprotkb/Q9M2J3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng 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"AT3G58200.1", "url": "https://www.ensemblgenomes.org/id/AT3G58200.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro 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Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9M2J6", "url": "https://www.uniprot.org/uniprotkb/Q9M2J6" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "RTM3, which controls long-distance movement of potyviruses, is a member of a new plant gene family encoding a meprin and TRAF homology domain-containing protein.", "journal": "Plant Physiol.", "date": "2010", "authors": "Cosson Patrick, Sofer Luc, Le Quang Hien, L\u00e9ger Val\u00e9rie, Schurdi-Levraud Val\u00e9rie, Whitham Steven A, Yamamoto Miki L, Gopalan Suresh, Le Gall Olivier, Candresse Thierry, Carrington James C, Revers Fr\u00e9d\u00e9ric", "evidence": [ { "database": "UniProtKB", "id": "Q9M2J6", "url": "https://www.uniprot.org/uniprotkb/Q9M2J6" } ], "reference": [ { "type": "PubMed", "id": "20584941", "url": "https://glygen.org/publication/PubMed/20584941" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2J6", "url": "https://www.uniprot.org/uniprotkb/Q9M2J6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G58200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G58200", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", 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"MGLISAKETKNNTRGMGLLLVFFPDHHNNNDDSPSSSSSSPATTTLFRSRSSRLLLSKAQSTISICILLLFLTLFLFTLSTFEPSSGFPAVSSSRPHRRFLLNRDISASSESRRRYNRFALQGMGTLFLRGTKSMHDLIVVHISSDTTEDDLRLFMRLIHRSGVTSKSDVVLLFNSGTRFTEMIEEENDSFLKLVDVHRNSSNQIDSVWGFNLTKFMKKQSKSSSSEPIWGKKTHRANYNDTSSLNNSTESTELLTHGSVVGFDVTELDPENSLSGFMDHVPISLRRWACYPMLLGRVRRNFKHVMLVDAKTSLFLGDPLTRIRNRSLESVLFFSKHSSSSKKSSEVNPAILIGGAKGIRRLSSSMHTEIVRATIQQQHKKKNSVTESVVLSQLVGNVHMTKNFEVVTSESVVPEASSLAELRTRNSAASSIKNHDIIQRGGGNSNSNHIIDIMAIIMKRICSCELDSSVYNYC", "length": 474, "header": "tr|Q9M2K7-1|Q9M2K7_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2K7-1" }, "isoforms": [ { "isoform_ac": "Q9M2K7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2K7/entry#Q9M2K7-1", "sequence": { "sequence": "MGLISAKETKNNTRGMGLLLVFFPDHHNNNDDSPSSSSSSPATTTLFRSRSSRLLLSKAQSTISICILLLFLTLFLFTLSTFEPSSGFPAVSSSRPHRRFLLNRDISASSESRRRYNRFALQGMGTLFLRGTKSMHDLIVVHISSDTTEDDLRLFMRLIHRSGVTSKSDVVLLFNSGTRFTEMIEEENDSFLKLVDVHRNSSNQIDSVWGFNLTKFMKKQSKSSSSEPIWGKKTHRANYNDTSSLNNSTESTELLTHGSVVGFDVTELDPENSLSGFMDHVPISLRRWACYPMLLGRVRRNFKHVMLVDAKTSLFLGDPLTRIRNRSLESVLFFSKHSSSSKKSSEVNPAILIGGAKGIRRLSSSMHTEIVRATIQQQHKKKNSVTESVVLSQLVGNVHMTKNFEVVTSESVVPEASSLAELRTRNSAASSIKNHDIIQRGGGNSNSNHIIDIMAIIMKRICSCELDSSVYNYC", "length": 474, "header": "tr|Q9M2K7-1|Q9M2K7_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2K7-1" }, "locus": { "chromosome": "3", "start_pos": 21238223, "end_pos": 21240228, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57400.1", "url": "https://www.ensemblgenomes.org/id/AT3G57400.1" }, { "database": "Ensembl Peptide", "id": "AT3G57400.1", "url": "https://www.ensemblgenomes.org/id/AT3G57400.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2K7", "url": "https://www.uniprot.org/uniprotkb/Q9M2K7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2K7", "url": "https://www.uniprot.org/uniprotkb/Q9M2K7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M2K7", "url": "https://www.uniprot.org/uniprotkb/Q9M2K7" } ], "pmid": "" } ] } ] }, 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"Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF7780", "eco_id": "ECO_0000259", "start_pos": 119, "end_pos": 410, "start_aa": "Phe", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 11, "end_pos": 13 }, { "start_pos": 188, "end_pos": 190 }, { "start_pos": 200, "end_pos": 202 }, { "start_pos": 212, "end_pos": 214 }, { "start_pos": 240, "end_pos": 242 }, { "start_pos": 246, "end_pos": 248 }, { "start_pos": 247, "end_pos": 249 }, { "start_pos": 325, "end_pos": 327 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"uniprot_ac": "Q9M2L3", "uniprot_id": "Q9M2L3_ARATH", "mass": { "chemical_mass": 41320.0, "monoisotopic_mass": 41320.0 }, "refseq": { "ac": "NP_191293", "name": "DnaJ heat shock amino-terminal domain protein (DUF1977)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191293" }, "gene_names": [], "protein_names": [ { "name": "DnaJ heat shock amino-terminal domain protein (DUF1977)", "type": "synonym", "evidence": [ { "id": "NP_191293", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191293" }, { "id": "Q9M2L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2L3", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3", "locus": {} } ], "crossref": [ { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824901", "url": "https://www.ncbi.nlm.nih.gov/gene/824901", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015399", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015399", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051100", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051100", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G57340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ARSREHN", "url": "https://omabrowser.org/oma/group/ARSREHN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43908", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43908", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43908:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43908:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09320", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09320", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191293", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191293", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G57340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2L3", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2L3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDGNKDDALKCLKICKSAMEAGDRPRALKFLAKARRLDPNLPIDDLVSELNNNKSDEPGSAKSPGSAAAKDSSNSSDRPSLRQRGSSTTSSSSSMSYTEEQISIVRKIKSKKDYYEILGLESNCSVDDVRKAYRKLSLKVHPDKNQAPGSEEAFKSVSKAFQCLSNDEARKKYDVSGSDEPIYQPRRSARSNGFNGGYYYEDEFDPNEIFRSFFGGGGFGGGGMPPATAQFRSFNFGATRQRTANNNQAPDAGFNARILLQLLPVVFILLLNFMPSSQPVYQLSATYPYQYKFTTQKGVNYFVKSSKFEQDYPRDSNDRHTLEEQVERDYVSILSQNCRYEMQRKQWGFVRETPHCDMMRRFDTAAA", "length": 367, "header": "tr|Q9M2L3-1|Q9M2L3_ARATH Isoform 1 of DnaJ heat shock amino-terminal domain protein (DUF1977) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2L3-1" }, "isoforms": [ { "isoform_ac": "Q9M2L3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3/entry#Q9M2L3-1", "sequence": { "sequence": "MDGNKDDALKCLKICKSAMEAGDRPRALKFLAKARRLDPNLPIDDLVSELNNNKSDEPGSAKSPGSAAAKDSSNSSDRPSLRQRGSSTTSSSSSMSYTEEQISIVRKIKSKKDYYEILGLESNCSVDDVRKAYRKLSLKVHPDKNQAPGSEEAFKSVSKAFQCLSNDEARKKYDVSGSDEPIYQPRRSARSNGFNGGYYYEDEFDPNEIFRSFFGGGGFGGGGMPPATAQFRSFNFGATRQRTANNNQAPDAGFNARILLQLLPVVFILLLNFMPSSQPVYQLSATYPYQYKFTTQKGVNYFVKSSKFEQDYPRDSNDRHTLEEQVERDYVSILSQNCRYEMQRKQWGFVRETPHCDMMRRFDTAAA", "length": 367, "header": "tr|Q9M2L3-1|Q9M2L3_ARATH Isoform 1 of DnaJ heat shock amino-terminal domain protein (DUF1977) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2L3-1" }, "locus": { "chromosome": "3", "start_pos": 21218981, "end_pos": 21220485, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57340.2", "url": "https://www.ensemblgenomes.org/id/AT3G57340.2" }, { "database": "Ensembl Peptide", "id": "AT3G57340.2", "url": "https://www.ensemblgenomes.org/id/AT3G57340.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 233, "end_pos": 233, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2L3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2L3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser233" }, { "start_pos": 63, "end_pos": 63, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2L3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2L3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser63" }, { "start_pos": 73, "end_pos": 73, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2L3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2L3" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser73" }, { "start_pos": 76, "end_pos": 76, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2L3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2L3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser76" }, { "start_pos": 80, "end_pos": 80, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": 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& cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M2L3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2L3" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2L3", "url": "https://www.uniprot.org/uniprotkb/Q9M2L3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and 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"MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRPNDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHSSSGFERNLIKSMNGSVSEDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSAGDIAGLLSGVEVAARTSLPVRGRAVLNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIEHVDGADAKVTKSTGDPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLREVISNVRPYSPATIDYGSHSKYRESERNNNNNNNNNNNNNGRSRADRWSSERTTTSDYGGKKSKEEGNVAEELKKALKGAA", "length": 367, "header": "tr|Q9M2P9-1|Q9M2P9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=OEP40 PE=1 SV=1 CANONICAL=Q9M2P9-1" }, "isoforms": [ { "isoform_ac": "Q9M2P9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2P9/entry#Q9M2P9-1", "sequence": { "sequence": 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}, { "id": "ath:AT3G57970", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57970", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SWGQVSP", "url": "https://omabrowser.org/oma/group/SWGQVSP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33432", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33432", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33432:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33432:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03735", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03735", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191356", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191356", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57970", "url": 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"url": "https://www.uniprot.org/uniprotkb/Q9M2Q1/entry#Q9M2Q1-1", "sequence": { "sequence": "MNGDGFSSDLDSVEEESTDIPIKNTETVPSYKGDDDILFSPLDKKVKLSMLQDRAYYYVLHAFKAESPAISSSRIVIMQELLKELKIEYKTHQTYHNAIEADPMVLQLRNVSLASDEKEMQKLTVAEEPEITGVDGQPLIIRIKLNKDDNAKIQDRVLAPAKIKDGKVLAPAKIQDEEAKPSSTSDDSPDSSWGQVSPGSLVGRRVHIQMPDEDEYIEFLITKYDANTETHHLLSAFSNKDYEDPCNWVDLRHVQAEDMKWPEGDPDLPVWKCSPKPGETLFHETSTTQNKKQVHEVGKTSTGIPVIRKVDKGKAVVDA", "length": 319, "header": "tr|Q9M2Q1-1|Q9M2Q1_ARATH Isoform 1 of Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2Q1-1" }, "locus": { "chromosome": "3", "start_pos": 21465226, "end_pos": 21466677, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57970.1", "url": "https://www.ensemblgenomes.org/id/AT3G57970.1" }, { "database": "Ensembl Peptide", "id": "AT3G57970.1", "url": "https://www.ensemblgenomes.org/id/AT3G57970.1" } ] } } ], "glycosylation": [], "phosphorylation": [], 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33450:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05553", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05553", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191354", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191354", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57950", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G57950", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2Q3", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2Q3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQLKSSSPSSSSSSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKKRKLMMLFPTKASKNQRKIFFGSFRLHYNWCSSHVVPVPQPFPFPSSYINGEEEDDSQLSGYLEWLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEMLERGL", "length": 181, "header": "tr|Q9M2Q3-1|Q9M2Q3_ARATH Isoform 1 of Cotton fiber protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2Q3-1" }, "isoforms": [ { "isoform_ac": "Q9M2Q3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3/entry#Q9M2Q3-1", "sequence": { "sequence": "MQLKSSSPSSSSSSSSSSMKLKTLIQNLLTHPLYRFLRALAKAKSIFLEISKHNSNNKKRKLMMLFPTKASKNQRKIFFGSFRLHYNWCSSHVVPVPQPFPFPSSYINGEEEDDSQLSGYLEWLEHKKFDDVEEIGDVVADGGDDDIDHLADMFIANCHEKFLLEKVESYRRFQEMLERGL", "length": 181, "header": "tr|Q9M2Q3-1|Q9M2Q3_ARATH Isoform 1 of Cotton fiber protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2Q3-1" }, "locus": { "chromosome": "3", "start_pos": 21460335, "end_pos": 21461211, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57950.1", "url": "https://www.ensemblgenomes.org/id/AT3G57950.1" }, { "database": "Ensembl Peptide", "id": "AT3G57950.1", "url": "https://www.ensemblgenomes.org/id/AT3G57950.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 17, "end_pos": 17, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser17" }, { "start_pos": 18, "end_pos": 18, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser18" }, { "start_pos": 5, "end_pos": 5, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser5" }, { "start_pos": 6, "end_pos": 6, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser6" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q3", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q3" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q3", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57950", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57950", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q3", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 5, 6, 17, 18 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, 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"authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2Q5-1", "uniprot_ac": "Q9M2Q5", "uniprot_id": "Q9M2Q5_ARATH", "mass": { "chemical_mass": 15840.0, "monoisotopic_mass": 15840.0 }, "refseq": { "ac": "NP_001319787", "name": "rho GTPase-activating gacO-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319787" }, "gene_names": [], "protein_names": [ { "name": "Rho GTPase-activating gacO-like protein", "type": "synonym", "evidence": [ { "id": "Q9M2Q5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q5/entry#names_and_taxonomy" } ] }, { "name": "rho GTPase-activating gacO-like protein", "type": "synonym", "evidence": [ { "id": "NP_001319787", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319787" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": 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"categories": [ "Protein Classification" ] }, { "id": "PTHR34055:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34055:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001319787", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319787", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G57930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2Q5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDEEEEEEELVKKTDEEEDKDDDTNGSVTSKENVTENGRKRKKPVESKESNITEEENGVGSKSSTEDSMKSSSSIGFRQNGSRRKNKPRRAAEAVVECNGV", "length": 141, "header": "tr|Q9M2Q5-1|Q9M2Q5_ARATH Isoform 1 of Rho GTPase-activating gacO-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2Q5-1" }, "isoforms": [ { "isoform_ac": "Q9M2Q5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q5/entry#Q9M2Q5-1", "sequence": { "sequence": "MRRGRGKGKRQNATAREDRGSGEEEKIPAFRKRGRPQKPVKDEEEEEEELVKKTDEEEDKDDDTNGSVTSKENVTENGRKRKKPVESKESNITEEENGVGSKSSTEDSMKSSSSIGFRQNGSRRKNKPRRAAEAVVECNGV", "length": 141, "header": "tr|Q9M2Q5-1|Q9M2Q5_ARATH Isoform 1 of Rho GTPase-activating gacO-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2Q5-1" }, "locus": { "chromosome": "3", "start_pos": 21446856, "end_pos": 21448842, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57930.2", "url": "https://www.ensemblgenomes.org/id/AT3G57930.2" }, { "database": "Ensembl Peptide", "id": "AT3G57930.2", "url": "https://www.ensemblgenomes.org/id/AT3G57930.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 21, "end_pos": 21, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2Q5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2Q5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser21" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, 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Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q5", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": 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"https://omabrowser.org/oma/group/Q9M2Q7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q2KI19-1", "protein_name": "G patch domain-containing protein 11", "gene_name": "GPATCH11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAEEEDYMSDSFINVQEDIRPGLPMLRQIREARRKEEKRQEANLKNRQKSIKEEEQERRDMGLKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHETLLKRKAEEKLESYRRKIHMKSQAEERAAEQFRIRLKNKQDEMKLEGDLRRSQRACQQLDTQKNIQVPREAWYWLRPEEETEEETEEEKEQDEDEYKSEDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADHD", "length": 260 }, "evidence": [ { "id": "Q9M2Q7", "url": "https://omabrowser.org/oma/group/Q9M2Q7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UFS4-1", "protein_name": "G patch domain-containing protein 11", "gene_name": "Gpatch11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTEEEDYMSDSFINVQEDVRPGVPMLRQIREARRKEEKQQQANLRNRQKSVKEEERERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIGHESSLKRKAEERLENYRRKIHMKNQNEAKAAEEFRMRLKSKQDEMRLEGDLRRSQRACQQLDAQKNIQVPREAWYWLRPEEETEEEEEEEEKEEQDEDECPSEDLSVLEKLQILTGYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADHD", "length": 262 }, "evidence": [ { "id": "Q9M2Q7", "url": "https://omabrowser.org/oma/group/Q9M2Q7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N954-1", "protein_name": "G patch domain-containing protein 11", "gene_name": "GPATCH11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRSARSTALNRGEQRAVRYYSHMKLNMAEEEDYMSDSFINVQEDIRPGLPMLRQIREARRKEEKQQEANLKNRQKSLKEEEQERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLKRKAEEKLESYRKKIHMKNQAEEKAAEQFRMRLKNKQDEMKLEGDLRRSQRACQQLDVQKNIQVPREAWYWLRLEEETEEDEEEKEQDEDEYKSEDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADHD", "length": 285 }, "evidence": [ { "id": "Q9M2Q7", "url": "https://omabrowser.org/oma/group/Q9M2Q7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VI83-1", "protein_name": "G patch domain-containing protein 11", "gene_name": "Dmel\\CG10053", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDEEEDYMSDKFLVGLQDVRPSLVHNRGRKRQIEVESKKDELKKRQRETAASSGNVDNVRLQQSLNKPISADNKGFQLLAKMGYKAGSGLGITSDARTEPVGITIKSGRGGLGREAAVAELALKRQKLRRAHLLNKAGIKSDEEVSTEAYRRRATHKAEERKLQYDIKRCQQTCESLDLKSAITEPDLDFFWPPKPKDEDESQSDADDPEVEVPPKQEPYSPSEQLELLTGYLRTAYCFCYWCGTHYDDAEDLGSNCPGLTRDEH", "length": 266 }, "evidence": [ { "id": "Q9M2Q7", "url": "https://omabrowser.org/oma/group/Q9M2Q7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q7", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q7" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q7", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q7", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 7, "end_pos": 9, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M2Q7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q7" }, { "id": "PS50174", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50174" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-patch", "eco_id": "ECO_0000259", "start_pos": 93, "end_pos": 139, "start_aa": "Glu", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 9 ], "sequon_annotation_sites": [ { "start_pos": 7, "end_pos": 9 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2Q8-1", "uniprot_ac": "Q9M2Q8", "uniprot_id": "Q9M2Q8_ARATH", "mass": { "chemical_mass": 7779.0, "monoisotopic_mass": 7779.0 }, "refseq": { "ac": "NP_191349", "name": "import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191349" }, "gene_names": [], "protein_names": [ { "name": "Import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein", "type": "synonym", "evidence": [ { "id": "Q9M2Q8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8/entry#names_and_taxonomy" } ] }, { "name": "import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein", "type": "synonym", "evidence": [ { "id": "NP_191349", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191349" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q8", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8", "locus": {} } ], "crossref": [ { "id": "824959", "url": "https://www.ncbi.nlm.nih.gov/gene/824959", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G57900", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57900", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9M2Q8", "url": "https://www.orthodb.org/?gene=Q9M2Q8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "NP_191349", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191349", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57900", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G57900", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2Q8", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2Q8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPTEMRYLEEENGAMMKTFKDAVTGFATGKTSLVFIGVEQLVQNFRAKRDFFNGAHITMTKVARTHY", "length": 68, "header": "tr|Q9M2Q8-1|Q9M2Q8_ARATH Isoform 1 of Import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2Q8-1" }, "isoforms": [ { "isoform_ac": "Q9M2Q8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8/entry#Q9M2Q8-1", "sequence": { "sequence": "MDPTEMRYLEEENGAMMKTFKDAVTGFATGKTSLVFIGVEQLVQNFRAKRDFFNGAHITMTKVARTHY", "length": 68, "header": "tr|Q9M2Q8-1|Q9M2Q8_ARATH Isoform 1 of Import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2Q8-1" }, "locus": { "chromosome": "3", "start_pos": 21442281, "end_pos": 21442574, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57900.1", "url": "https://www.ensemblgenomes.org/id/AT3G57900.1" }, { "database": "Ensembl Peptide", "id": "AT3G57900.1", "url": "https://www.ensemblgenomes.org/id/AT3G57900.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q8", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q8", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57900", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57900", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M2Q8", "url": "https://www.uniprot.org/uniprotkb/Q9M2Q8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33513:SF45", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF24847", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24847", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191116", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G55570", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G55570", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2S2", "url": "https://www.uniprot.org/uniprotkb/Q9M2S2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2S2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2S2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFPFTHVHAFNKGNEEVYMDVENGKNGEGSVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLWISTRNPKLYQEKSINSKLKKDTKSAHA", 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the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2S2", "url": "https://www.uniprot.org/uniprotkb/Q9M2S2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G55570", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55570", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M2S2", "url": "https://www.uniprot.org/uniprotkb/Q9M2S2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2U6-1", "uniprot_ac": "Q9M2U6", "uniprot_id": "Q9M2U6_ARATH", "mass": { "chemical_mass": 11951.0, "monoisotopic_mass": 11951.0 }, "refseq": { "ac": "NP_191009", "name": "hypothetical protein (DUF1163)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191009" }, "gene_names": [ { "name": "T14E10.3", "type": "synonym", "evidence": [ { "id": "NP_191009", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191009" }, { "id": "Q9M2U6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M2U6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6/entry#names_and_taxonomy" } ] }, { "name": "hypothetical protein (DUF1163)", "type": "synonym", "evidence": [ { "id": "NP_191009", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191009" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2U6", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6", "locus": {} } ], "crossref": [ { "id": "824607", "url": "https://www.ncbi.nlm.nih.gov/gene/824607", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009544", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009544", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G54410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VFGKHPR", "url": "https://omabrowser.org/oma/group/VFGKHPR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M2U6", "url": "https://www.orthodb.org/?gene=Q9M2U6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191009", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191009", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G54410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G54410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2U6", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2U6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLSLPHLHKSKLFTINNLRYRCPQLLKVSVVVSDENISSIGTYIMEDVKEKKQVTFGLQFSLTDCRKKTLGVMSYACCGVTLRFEPGSEMKASVFGKHPRYTNF", "length": 105, "header": "tr|Q9M2U6-1|Q9M2U6_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2U6-1" }, "isoforms": [ { "isoform_ac": "Q9M2U6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6/entry#Q9M2U6-1", "sequence": { "sequence": "MLLSLPHLHKSKLFTINNLRYRCPQLLKVSVVVSDENISSIGTYIMEDVKEKKQVTFGLQFSLTDCRKKTLGVMSYACCGVTLRFEPGSEMKASVFGKHPRYTNF", "length": 105, "header": "tr|Q9M2U6-1|Q9M2U6_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2U6-1" }, "locus": { "chromosome": "3", "start_pos": 20144398, "end_pos": 20145489, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G54410.1", "url": "https://www.ensemblgenomes.org/id/AT3G54410.1" }, { "database": "Ensembl Peptide", "id": "AT3G54410.1", "url": "https://www.ensemblgenomes.org/id/AT3G54410.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2U6", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2U6", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G54410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54410", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M2U6", "url": "https://www.uniprot.org/uniprotkb/Q9M2U6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 37, "end_pos": 39, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 37, "end_pos": 39 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "Q9M2W0", "uniprot_id": "Q9M2W0_ARATH", "mass": { "chemical_mass": 102874.0, "monoisotopic_mass": 102874.0 }, "refseq": { "ac": "NP_001319753", "name": "CAP-gly domain linker", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319753" }, "gene_names": [], "protein_names": [ { "name": "CAP-gly domain linker", "type": "synonym", "evidence": [ { "id": "NP_001319753", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319753" }, { "id": "Q9M2W0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2W0", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana 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[ "Protein Classification" ] }, { "id": "PTHR47491:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47491:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF24670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001319753", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319753", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G55060", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G55060", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LPM7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2W0", "url": 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"MKKLFFFRSSGNGNDKQVNCEKEADSKMRTQASSQAEQEFDSPKSHGQVSGGLALRRSLSWSSAGFLFDKFGETSKNELTTSATKSKDRRRNHSSRCFTPERQVRERQCKADKFQHDSSGSSSSCSSNVSSKVLDRYIDGEEHLEPCKQKSNSSHSGVSESINRRRLPPRVQWTVPTSPSDTFDEKRKSQSFREAKGTHLRYSSADCVDNGLRHGSPRSVARNVIERLSQTHGKSKGSNHEPITIQDVYGGSLNRTFDSSSDIAANVSLAEHYEPVNEYYTQDYGGHQQNCIRSRNVYKCMEDDLDSELEMKIKEAEKRAKLFSAELEQQRCLSDCDFDVSSLVGAIRKLEDERLHLAFENVNLLRSQIVERASAREEIRWLKSDWDLHIQRLEKEKSELQAGLEKELDRRSGEWTSKLEKFQLEEKKLRERVRELAEHNVSLQRELSAFHENETENKDMITHLERRVAELTTTADKLHEENNYVKQTLSKLQESYAGATEDLDFLRRNFEEKDQECRELHKSVTKFFRTCKEQGKTIEGLRDGVSEEVKKQPSEKLDQLVKKLQVEQVRLTGIELSLRREVESMKLETDSLRHENICLLNRLKGNGQEIDITTLKLENELKMRVCYLQEQGLSMLNESSQLCYKLLKFIKGKLTQLPETYQDKNSVKDGLSEQFMIESEMKVHGIRRGTENLKRSLQTVTSVVASNSESSSSNTGRPREQRNQSVEENLRAELSAETLITSLVREKLYSKEKEIEQLQAELAAAVRGNEILRCEVQSSLDNLSVTTHELKDLKHQMLKKEESIRRLESNLQEAAKEMARLNALLSKVSNERGQIWSEYKQYGEKNMLLNSENETLKGMVEKLEEKVLEKEGEITILQDTIGSKHLNLLSSPDFLV", "length": 896, "header": "tr|Q9M2W0-1|Q9M2W0_ARATH Isoform 1 of CAP-gly domain linker OS=Arabidopsis 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CANONICAL=Q9M2W0-1" }, "locus": { "chromosome": "3", "start_pos": 20402984, "end_pos": 20407103, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G55060.3", "url": "https://www.ensemblgenomes.org/id/AT3G55060.3" }, { "database": "Ensembl Peptide", "id": "AT3G55060.3", "url": "https://www.ensemblgenomes.org/id/AT3G55060.3" } ] } }, { "isoform_ac": "Q9M2W0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0/entry#Q9M2W0-1", "sequence": { "sequence": "MKKLFFFRSSGNGNDKQVNCEKEADSKMRTQASSQAEQEFDSPKSHGQVSGGLALRRSLSWSSAGFLFDKFGETSKNELTTSATKSKDRRRNHSSRCFTPERQVRERQCKADKFQHDSSGSSSSCSSNVSSKVLDRYIDGEEHLEPCKQKSNSSHSGVSESINRRRLPPRVQWTVPTSPSDTFDEKRKSQSFREAKGTHLRYSSADCVDNGLRHGSPRSVARNVIERLSQTHGKSKGSNHEPITIQDVYGGSLNRTFDSSSDIAANVSLAEHYEPVNEYYTQDYGGHQQNCIRSRNVYKCMEDDLDSELEMKIKEAEKRAKLFSAELEQQRCLSDCDFDVSSLVGAIRKLEDERLHLAFENVNLLRSQIVERASAREEIRWLKSDWDLHIQRLEKEKSELQAGLEKELDRRSGEWTSKLEKFQLEEKKLRERVRELAEHNVSLQRELSAFHENETENKDMITHLERRVAELTTTADKLHEENNYVKQTLSKLQESYAGATEDLDFLRRNFEEKDQECRELHKSVTKFFRTCKEQGKTIEGLRDGVSEEVKKQPSEKLDQLVKKLQVEQVRLTGIELSLRREVESMKLETDSLRHENICLLNRLKGNGQEIDITTLKLENELKMRVCYLQEQGLSMLNESSQLCYKLLKFIKGKLTQLPETYQDKNSVKDGLSEQFMIESEMKVHGIRRGTENLKRSLQTVTSVVASNSESSSSNTGRPREQRNQSVEENLRAELSAETLITSLVREKLYSKEKEIEQLQAELAAAVRGNEILRCEVQSSLDNLSVTTHELKDLKHQMLKKEESIRRLESNLQEAAKEMARLNALLSKVSNERGQIWSEYKQYGEKNMLLNSENETLKGMVEKLEEKVLEKEGEITILQDTIGSKHLNLLSSPDFLV", "length": 896, "header": "tr|Q9M2W0-1|Q9M2W0_ARATH Isoform 1 of CAP-gly domain linker OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M2W0-1" }, "locus": { "chromosome": "3", "start_pos": 20402984, "end_pos": 20406644, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G55060.1", "url": "https://www.ensemblgenomes.org/id/AT3G55060.1" }, { "database": "Ensembl Peptide", "id": "AT3G55060.1", "url": "https://www.ensemblgenomes.org/id/AT3G55060.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 30, "end_pos": 30, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2W0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2W0" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Thr30" }, { "start_pos": 33, "end_pos": 33, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2W0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2W0" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser33" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2W0", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9M2W0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2W0" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2W0", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G55060", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55060", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M2W0", "url": "https://www.uniprot.org/uniprotkb/Q9M2W0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 128, "end_pos": 130, "annotation": "n_glycosylation_sequon" }, { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 266, "end_pos": 268, "annotation": "n_glycosylation_sequon" }, { "start_pos": 440, "end_pos": 442, "annotation": "n_glycosylation_sequon" }, { "start_pos": 453, "end_pos": 455, "annotation": "n_glycosylation_sequon" }, { "start_pos": 637, "end_pos": 639, "annotation": "n_glycosylation_sequon" }, { "start_pos": 723, "end_pos": 725, "annotation": "n_glycosylation_sequon" }, { "start_pos": 782, "end_pos": 784, "annotation": "n_glycosylation_sequon" }, { "start_pos": 853, "end_pos": 855, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M2W0", "database": "UniProtKB", "url": 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"end_pos": 784 }, { "start_pos": 853, "end_pos": 855 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { 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"sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M2X6-1", "uniprot_ac": "Q9M2X6", "uniprot_id": "Q9M2X6_ARATH", "mass": { "chemical_mass": 17831.0, "monoisotopic_mass": 17831.0 }, "refseq": { "ac": "NP_190551", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190551" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9M2X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M2X6/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_190551", "database": "RefSeq", "url": 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Classification" ] }, { "id": "ath:AT3G49820", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49820", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NYRCVAV", "url": "https://omabrowser.org/oma/group/NYRCVAV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33526", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33526", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33526:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33526:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF27755", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27755", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190551", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190551", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49820", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49820", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M2X6", "url": "https://www.uniprot.org/uniprotkb/Q9M2X6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M2X6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2X6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKAKVIEKENCFVWLVKAPFRLLIMARDAYIRSITSCSGAGIYSGGGSSGFGQLSGNFQICDPPSTALPRSFTLTSAAHDQGCLTRGGQPTIAMRQSLSLDHRKNNRCVVVMGRIDEEMSCDDDDEFQEEDSFLDYGNCEILTKEIEKPSVDQKHKPLGRF", "length": 161, "header": "tr|Q9M2X6-1|Q9M2X6_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M2X6-1" }, "isoforms": [ { "isoform_ac": "Q9M2X6-1", "url": "https://www.uniprot.org/uniprotkb/Q9M2X6/entry#Q9M2X6-1", "sequence": { "sequence": 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B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M2X8", "url": "https://www.uniprot.org/uniprotkb/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9M2X8", 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"date": "2012-10", "authors": "Mayank Pururawa, Grossman Jonas, Wuest Samuel, Boisson-Dernier Aur\u00e9lien, Roschitzki Bernd, Nanni Paolo, N\u00fchse Thomas, Grossniklaus Ueli", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": 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Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2X8" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M2X8", "url": 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} ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M2X9", "url": "https://www.uniprot.org/uniprotkb/Q9M2X9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49790", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": 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A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M303", "url": "https://www.uniprot.org/uniprotkb/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": 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thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M303", "url": "https://www.uniprot.org/uniprotkb/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9M303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M303" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G48800", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48800", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M303", "url": "https://www.uniprot.org/uniprotkb/Q9M303" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 198, "end_pos": 200, "annotation": "n_glycosylation_sequon" }, { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 98, "end_pos": 100, "annotation": "n_glycosylation_sequon" } ], 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"Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26664", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26664", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001319711", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319711", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G48770", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G48770", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M305-1", "url": "https://www.uniprot.org/uniprotkb/Q9M305-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKAFSPNTSNIKQEKSSNRSSHHKQDLAWNYVREAIDSRRRKVITCGFCGKQYVGSEINRMKHHLAGLNNRSACQKVSSEVQHSMRKSLEENKEKPKKIIVVDLDMQDDEVNVGQSSHQSCSSSSRKRKVQHSMRKSLEETEEKLKQIIVVDLDMQDNEVNVGQSSLQSFSSSNRKRKRETKTKPVIIETMTESAKQHIERIRRTKFSIGGAENPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNEYPEGVDPSLEFVITSEDITNTGAPATLLIFNNEKGFSEKNIESICSVGRSTKKGNRKCGYIGEKGIGFKSVFLITSQPYIFSNGYQIRFNEAPCSHCSLGYIVPEWVDQHPSLVDIQRMYGSGSALPTTTIILPLKSDKVKPVKEQLSNVHPEVLLFLSKIKRLSIREHCLDPKLSTVNSIGIVSETNFVTRKSIDAESYTIHLSASEKGKNSEQECSYYMWRQKFPVKHENRVDRRSEVEEWVITLAFPFGERLGHGNNSPGIYAFLPTEMVTNFPFIIQADFILASSREMILLDDIWNQGILNCVPLAFLNAFTSLVKTTDAPVSSLLPAFRFLPVKESNYAKLNVVRESIRARVCAEEIVPSISHQGQKFFYKPCEVGRLIPTFWDILEKAGSEGASLQNISSHGIYILNSAFDRTEYDNVLNFLGLKQVSNEWYVKCIQGCDLVTSVSEATYVEVLLFIAENWQCRFQNTNMGKVPLIKYVVQKGVSSLSSLGGFSPRTLCLSTEKNQAWLLDWNDEFRCMSNFVFMPPTTRTALKVCSKKEIIHTWLKENVKVITLSVSDYAKHLRENLNGDKRLVVAYAHFLHHSISKDFLSKEEAGKCCKDMPLVDNYGNVNISRNGVLVPASAGKWVSLVGSNPWRHSGYIELSEEYLLSNRFAGLRSNKKDLLGFLKSSVEAGDIPDIEPPNVAIPALSGPLTKENVLLLLEWINKCNRHSLRSNFLNSVRGGSWLRTTMNGVSDYRPPSQSFYHTSSWGSILQNGSILVDIPLVDRSYYGNEIEKYKEELKIAGVMFEFSEVCRFVGNHLMSLAETSTQSSANVFSILKFIRYLREKRLSPADFITAVKNGPWLKTISGYRSPDGAVLFSEEWKAASLISDIPFIDRGFYGVVSLNGYKEELELLGVVVKFPDNYSLIVSHLNTAKLTYLTPDAMFLVLDCMRQLSPHRLINALWNSSQCFKTKKNGYKSPAECFIPDPEWTCLLSVFDCFPLIDDDFYGSRIFAYKGELKQIGVKLQLEEAVKMFVSTFKQKAISSGLTRCTASSLLSCYKKLMGSLYKYPEELMKSFKQFQWLHTKLGDFRAPKDCILFDSEWEPLRLIANLPFIDDGPNWYGKSIHEFRKELESLGVTVELRKGMSHVISSLSLPDPSRIAPSSALSLFRCIKFLREDRFQQLPKELLDKVSVKWLKTHAGYRSPEECLLFDRTWKLEPCDGPFIDEEYYGSDINSFREELIAIGVGHDSDKACQLLARNVYKLSETDAISRVYRFLSEAEWKPEKGASSGRIWIPSDEKWADISSCVLFDKDKLFGSKFNVLENHYCSGKDHNLLGFFSSAFGVRINPSIEDYCELWKYWEKTKNRLSSHECCAFWSFVVRHGDTVKAEKLLSESFSRLPVHSPDCNNNDGVMLSSISDVFIADDLLLKDMFIDSPVFVWYPTPSIPTLSRTRLIEIYRNIGVKEVSKCVEIAEADLTGFKTELQEVVDPKKNLIGPGLVKLILAFLSDPSLKVETAERLRIIHSLVDIDVKETSETITTEYTLSLPSKGEKLIAKAKRMIRWEREKGVVYAEKMEKTCGKRKLLEYATCFAEVIAKGVMWEREDLIGRLSELVKMAYLVEFDEEALEFLMKSKNLQVYEEDEKLISDEFSQVN", "length": 1899, "header": "tr|Q9M305-1|Q9M305_ARATH Isoform 1 of ATP/DNA binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M305-1" }, "isoforms": [ { "isoform_ac": "Q9M305-1", "url": "https://www.uniprot.org/uniprotkb/Q9M305/entry#Q9M305-1", "sequence": { "sequence": "MEKAFSPNTSNIKQEKSSNRSSHHKQDLAWNYVREAIDSRRRKVITCGFCGKQYVGSEINRMKHHLAGLNNRSACQKVSSEVQHSMRKSLEENKEKPKKIIVVDLDMQDDEVNVGQSSHQSCSSSSRKRKVQHSMRKSLEETEEKLKQIIVVDLDMQDNEVNVGQSSLQSFSSSNRKRKRETKTKPVIIETMTESAKQHIERIRRTKFSIGGAENPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNEYPEGVDPSLEFVITSEDITNTGAPATLLIFNNEKGFSEKNIESICSVGRSTKKGNRKCGYIGEKGIGFKSVFLITSQPYIFSNGYQIRFNEAPCSHCSLGYIVPEWVDQHPSLVDIQRMYGSGSALPTTTIILPLKSDKVKPVKEQLSNVHPEVLLFLSKIKRLSIREHCLDPKLSTVNSIGIVSETNFVTRKSIDAESYTIHLSASEKGKNSEQECSYYMWRQKFPVKHENRVDRRSEVEEWVITLAFPFGERLGHGNNSPGIYAFLPTEMVTNFPFIIQADFILASSREMILLDDIWNQGILNCVPLAFLNAFTSLVKTTDAPVSSLLPAFRFLPVKESNYAKLNVVRESIRARVCAEEIVPSISHQGQKFFYKPCEVGRLIPTFWDILEKAGSEGASLQNISSHGIYILNSAFDRTEYDNVLNFLGLKQVSNEWYVKCIQGCDLVTSVSEATYVEVLLFIAENWQCRFQNTNMGKVPLIKYVVQKGVSSLSSLGGFSPRTLCLSTEKNQAWLLDWNDEFRCMSNFVFMPPTTRTALKVCSKKEIIHTWLKENVKVITLSVSDYAKHLRENLNGDKRLVVAYAHFLHHSISKDFLSKEEAGKCCKDMPLVDNYGNVNISRNGVLVPASAGKWVSLVGSNPWRHSGYIELSEEYLLSNRFAGLRSNKKDLLGFLKSSVEAGDIPDIEPPNVAIPALSGPLTKENVLLLLEWINKCNRHSLRSNFLNSVRGGSWLRTTMNGVSDYRPPSQSFYHTSSWGSILQNGSILVDIPLVDRSYYGNEIEKYKEELKIAGVMFEFSEVCRFVGNHLMSLAETSTQSSANVFSILKFIRYLREKRLSPADFITAVKNGPWLKTISGYRSPDGAVLFSEEWKAASLISDIPFIDRGFYGVVSLNGYKEELELLGVVVKFPDNYSLIVSHLNTAKLTYLTPDAMFLVLDCMRQLSPHRLINALWNSSQCFKTKKNGYKSPAECFIPDPEWTCLLSVFDCFPLIDDDFYGSRIFAYKGELKQIGVKLQLEEAVKMFVSTFKQKAISSGLTRCTASSLLSCYKKLMGSLYKYPEELMKSFKQFQWLHTKLGDFRAPKDCILFDSEWEPLRLIANLPFIDDGPNWYGKSIHEFRKELESLGVTVELRKGMSHVISSLSLPDPSRIAPSSALSLFRCIKFLREDRFQQLPKELLDKVSVKWLKTHAGYRSPEECLLFDRTWKLEPCDGPFIDEEYYGSDINSFREELIAIGVGHDSDKACQLLARNVYKLSETDAISRVYRFLSEAEWKPEKGASSGRIWIPSDEKWADISSCVLFDKDKLFGSKFNVLENHYCSGKDHNLLGFFSSAFGVRINPSIEDYCELWKYWEKTKNRLSSHECCAFWSFVVRHGDTVKAEKLLSESFSRLPVHSPDCNNNDGVMLSSISDVFIADDLLLKDMFIDSPVFVWYPTPSIPTLSRTRLIEIYRNIGVKEVSKCVEIAEADLTGFKTELQEVVDPKKNLIGPGLVKLILAFLSDPSLKVETAERLRIIHSLVDIDVKETSETITTEYTLSLPSKGEKLIAKAKRMIRWEREKGVVYAEKMEKTCGKRKLLEYATCFAEVIAKGVMWEREDLIGRLSELVKMAYLVEFDEEALEFLMKSKNLQVYEEDEKLISDEFSQVN", "length": 1899, "header": "tr|Q9M305-1|Q9M305_ARATH Isoform 1 of ATP/DNA binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M305-1" }, "locus": { "chromosome": "3", "start_pos": 18078466, "end_pos": 18086817, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48770.2", "url": "https://www.ensemblgenomes.org/id/AT3G48770.2" }, { "database": "Ensembl Peptide", "id": "AT3G48770.2", "url": "https://www.ensemblgenomes.org/id/AT3G48770.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1688, "start_aa": "Thr", "end_pos": 1688, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1688", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 661, "end_pos": 661, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M305", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M305" } ], "site_lbl": "Tyr661" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G48770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48770", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M305", "url": "https://www.uniprot.org/uniprotkb/Q9M305" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1015, "end_pos": 1017, "annotation": "n_glycosylation_sequon" 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{ "id": "PS50808", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50808" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BED-type", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 82, "start_aa": "His", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1688 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 661 ], "sequon_annotation_sites": [ { "start_pos": 1015, "end_pos": 1017 }, { "start_pos": 1165, "end_pos": 1167 }, { "start_pos": 1207, "end_pos": 1209 }, { "start_pos": 19, "end_pos": 21 }, { "start_pos": 227, "end_pos": 229 }, { "start_pos": 510, "end_pos": 512 }, { "start_pos": 654, "end_pos": 656 }, { "start_pos": 71, "end_pos": 73 }, { "start_pos": 870, "end_pos": 872 }, { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M318-1", "uniprot_ac": "Q9M318", "uniprot_id": "Q9M318_ARATH", "mass": { "chemical_mass": 51939.0, "monoisotopic_mass": 51939.0 }, "refseq": { "ac": "NP_001190154", "name": "Pectin lyase-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190154" }, "gene_names": [], "protein_names": [ { "name": "Pectin lyase-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001190154", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190154" }, { "id": "Q9M318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M318/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M318", "url": "https://www.uniprot.org/uniprotkb/Q9M318" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M318", "locus": {} } ], "crossref": [ { "id": "AT3G61490", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G61490", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825322", "url": "https://www.ncbi.nlm.nih.gov/gene/825322", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000743", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000743", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011050", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011050", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012334", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012334", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051801", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051801", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G61490", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61490", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31339", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31339:SF50", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31339:SF50", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00295", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00295", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001190154", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190154", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61490", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61490", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LS88", "url": 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"MKNILACIVTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS", "length": 476, "header": "tr|Q9M318-1|Q9M318_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M318-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LS88-1", "url": "https://www.uniprot.org/uniprotkb/Q9M318/entry#A0A1I9LS88-1", "sequence": { "sequence": "MSLFAITSAFSEDNVTAISSNQLIPLNDKIIANLIRSPNTQTKSLNLASSFLHSLSAYKYSYSLLLTSSSNHLASPHSQRAHKSQVILFLSLKHKHTQMYKQTHHFCFQIYKTMKNILACIVTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS", "length": 589, "header": "tr|A0A1I9LS88-1|A0A1I9LS88_ARATH Computationally mapped isoform of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M318-1" }, "locus": { "chromosome": "3", "start_pos": 22757761, "end_pos": 22760470, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61490.4", "url": "https://www.ensemblgenomes.org/id/AT3G61490.4" }, { "database": "Ensembl Peptide", "id": "AT3G61490.4", "url": "https://www.ensemblgenomes.org/id/AT3G61490.4" } ] } }, { "isoform_ac": "A0A1I9LS89-1", "url": "https://www.uniprot.org/uniprotkb/Q9M318/entry#A0A1I9LS89-1", "sequence": { "sequence": "MYKQTHHFCFQIYKTMKNILACIVTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS", "length": 491, "header": "tr|A0A1I9LS89-1|A0A1I9LS89_ARATH Computationally mapped isoform of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M318-1" }, "locus": { "chromosome": "3", "start_pos": 22758039, "end_pos": 22760410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61490.5", "url": "https://www.ensemblgenomes.org/id/AT3G61490.5" }, { "database": "Ensembl Peptide", "id": "AT3G61490.5", "url": "https://www.ensemblgenomes.org/id/AT3G61490.5" } ] } }, { "isoform_ac": "Q9M318-1", "url": "https://www.uniprot.org/uniprotkb/Q9M318/entry#Q9M318-1", "sequence": { "sequence": "MKNILACIVTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS", "length": 476, "header": "tr|Q9M318-1|Q9M318_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M318-1" }, "locus": { "chromosome": "3", "start_pos": 22757761, "end_pos": 22760470, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61490.1", "url": "https://www.ensemblgenomes.org/id/AT3G61490.1" }, { "database": "Ensembl Peptide", "id": "AT3G61490.1", "url": "https://www.ensemblgenomes.org/id/AT3G61490.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 322, "end_pos": 322, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M318", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M318" } ], "site_lbl": "Thr322" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M318", "url": "https://www.uniprot.org/uniprotkb/Q9M318" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town 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"MAELIPWYYTSGSGIVLVLQTIFLFSIVRADLPGSWELIVQDAGIASMHTAVTRFNTVILLDRTNIGPSRKALDRHRCRRDPKDAALKRDCYAHSVLFDLGTNQIRPLMIQTDTWCSSGQFLSDGSLLQTGGDKDGFKKIRKFEPCDPNETCDWVELQDTELITGRWYASNQILPDGSVIIVGGRGTNTVEYYPPRENGAVPFQFLADVEDKQMDNLYPYVHLLPDDDGGNLFIFANSRAVKYDHRINAVVKEYPPLDGGPRNYPSGGSSAMLAIQGDFTTAEILICGGAQSGAFTARAIDAPAHGTCGRIVATAADPVWVTEEMPFGRIMGDMVNLPTGEILIINGAQAGSQGFEMGSDPCLYPLLYRPDQPIGLRFMTLNPGTVPRMYHSTANLLPDGRILLAGSNPHYFYKFNAEFPTELRIEAFSPEYLSPDRANLRPEIQEIPQIIRYGEVFDVFVTVPLPVVGIIQMNWGSAPFATHSFSQGQRLVKLTVAPSVPDGVGRYRIQCTAPPNGAVSPPGYYMAFAVNQGVPSIARWIRIVS", "length": 545, "header": "tr|Q9M332-1|Q9M332_ARATH Isoform 1 of Aldehyde oxidase GLOX OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M332-1" }, "isoforms": [ { "isoform_ac": "Q9M332-1", "url": "https://www.uniprot.org/uniprotkb/Q9M332/entry#Q9M332-1", "sequence": { "sequence": "MAELIPWYYTSGSGIVLVLQTIFLFSIVRADLPGSWELIVQDAGIASMHTAVTRFNTVILLDRTNIGPSRKALDRHRCRRDPKDAALKRDCYAHSVLFDLGTNQIRPLMIQTDTWCSSGQFLSDGSLLQTGGDKDGFKKIRKFEPCDPNETCDWVELQDTELITGRWYASNQILPDGSVIIVGGRGTNTVEYYPPRENGAVPFQFLADVEDKQMDNLYPYVHLLPDDDGGNLFIFANSRAVKYDHRINAVVKEYPPLDGGPRNYPSGGSSAMLAIQGDFTTAEILICGGAQSGAFTARAIDAPAHGTCGRIVATAADPVWVTEEMPFGRIMGDMVNLPTGEILIINGAQAGSQGFEMGSDPCLYPLLYRPDQPIGLRFMTLNPGTVPRMYHSTANLLPDGRILLAGSNPHYFYKFNAEFPTELRIEAFSPEYLSPDRANLRPEIQEIPQIIRYGEVFDVFVTVPLPVVGIIQMNWGSAPFATHSFSQGQRLVKLTVAPSVPDGVGRYRIQCTAPPNGAVSPPGYYMAFAVNQGVPSIARWIRIVS", "length": 545, "header": "tr|Q9M332-1|Q9M332_ARATH Isoform 1 of Aldehyde oxidase GLOX OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M332-1" }, "locus": { "chromosome": "3", "start_pos": 19975339, "end_pos": 19977532, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G53950.1", "url": "https://www.ensemblgenomes.org/id/AT3G53950.1" }, { "database": "Ensembl Peptide", "id": "AT3G53950.1", "url": "https://www.ensemblgenomes.org/id/AT3G53950.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M332", "url": "https://www.uniprot.org/uniprotkb/Q9M332" } ], "reference": [ { "type": 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"interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M332", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M332" }, { "id": "PF09118", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09118" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Galactose oxidase-like Early set", "eco_id": "ECO_0000259", "start_pos": 441, "end_pos": 543, "start_aa": "Arg", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9M332", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M332" }, { "id": "PF07250", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07250" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Glyoxal oxidase N-terminal", "eco_id": "ECO_0000259", "start_pos": 48, "end_pos": 432, "start_aa": "Met", "end_aa": 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"glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M346", "url": "https://www.uniprot.org/uniprotkb/Q9M346" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": 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"id": "Q9M346", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M346" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9M346", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M346" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M346", "url": "https://www.uniprot.org/uniprotkb/Q9M346" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G53800", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G53800", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M346", "url": "https://www.uniprot.org/uniprotkb/Q9M346" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M346", "url": "https://www.uniprot.org/uniprotkb/Q9M346" } ], "pmid": "" }, 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"https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M360", "url": "https://www.uniprot.org/uniprotkb/Q9M360" } ], "reference": [ { "type": 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"https://www.uniprot.org/uniprotkb/Q9M371", "locus": {} } ], "crossref": [ { "id": "AT3G61670", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G61670", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "825340", "url": "https://www.ncbi.nlm.nih.gov/gene/825340", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021480", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021480", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055126", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055126", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G61670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G61670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QENDMGT", "url": "https://omabrowser.org/oma/group/QENDMGT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31105", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31105", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31105:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31105:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11331", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11331", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22910", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22910", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191726", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191726", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G61670", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G61670", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M371", "url": "https://www.uniprot.org/uniprotkb/Q9M371", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M371-1", "url": "https://www.uniprot.org/uniprotkb/Q9M371-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADSTKVRLVRCPKCENLLSEPEDSPFFQCGGCFTVLRAKTKEREADSVSVKSVEDTAKPVSASSPEKAILDSSETSSDSDVPSLRHHHNVVPVDVESDPCSKPSSLEQGNRSILLGDKDDLKSQSGRQQDSGWDRFRKRTTKRCDSQSVINRLSTSRHPCDEGTSSSANYFPDSLLEFQKHLKDQSNEAIEQDRAGLLRQLEKIKEQLVQSCNVATDKSKEQAPSSSSASGLNKAPPMRFHSTGNHAVGGPSYYHQPQFPYNNNNINEAPMHHSLMHPSYGDPHRFPIHGRGPHPYFSGQYVGNNNNGHDLFDAYPQQNGHFHHSSCSCYHCYDNKYWRGSAPVVPDAPYNAGFYPHESVMGFAPPHNPRTYGSRGLQPHGRWPSNFSDAQMDALSRIRPPKVVLSGGSRHIRPLAGGAPFITCQNCFELLQLPKKPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLSTNTASTRQGEARVAADYTSDDYDLLGYVFHSLDDEPRDLPGLISDKSQDMQHVHSHSASLSEGELSSDSLTAKPLAEAHENFVDYSSINHDRSGAGSRSSRSEHDKVTLSKATAMRQNSMKEVSLASEMEVNFNDYSHRNSGVSKDQQQRAKKSGFASIVKKSFKDLTKSIQNDEGNKSNVSINGHPLTERLLRKAEKQAGVIQPGNYWYDYRAGFWGVMGGPGLGILPPFIEELNYPMPENCSGGTTGVFVNGRELHRKDLDLLAGRGLPPDRDRSYIVDITGRVIDEDTGEELDCLGKLAPTIEKLKRGFGMRLPKRTT", "length": 790, "header": "tr|Q9M371-1|Q9M371_ARATH Isoform 1 of Extra-large G-like protein, putative (DUF3133) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M371-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M371/entry#A0A1I9LNZ7-1", "sequence": { "sequence": "MADSTKVRLVRCPKCENLLSEPEDSPFFQCGGCFTVLRAKTKEREADSVSVKSVEDTAKPVSASSPEKAILDSSETSSDSDVPSLRHHHNVVPVDVESDPCSKPSSLEQGNRSILLGDKDDLKSQSGRQQDSGWDRFRKRTTKRCDSQSVINRLSTSRHPCDEGTSSSANYFPDSLLEFQKHLKDQSNEAIEQDRAGLLRQLEKIKEQLVQSCNVATDKSKEQAPSSSSASGLNKAPPMRFHSTGNHAVGGPSYYHQPQFPYNNNNINEAPMHHSLMHPSYGDPHRFPIHGRGPHPYFSGQYVGNNNNGHDLFDAYPQQNGHFHHSSCSCYHCYDNKYWRGSAPVVPDAPYNAGFYPHESVMGFAPPHNPRTYGSRGLQPHGRWPSNFSDAQMDALSRIRPPKVVLSGGSRHIRPLAGGAPFITCQNCFELLQLPKKPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLSTNTASTRQGEARVAADYTSDDYDLLGYVFHSLDDEPRDLPGLISDKSQDMQHVHSHSASLSEGELSSDSLTAKPLAEAHENFVDYSSINHDRSGAGSRSSRSEHDKVTLSKATAMRQNSMKEVSLASEMEVNFNDYSHRNSGVSKDQQQRAKKSGFASIVKKSFKDLTKSIQNDEGNKSNVSINGHPLTERLLRKAEKQAGVIQPGNYWYDYRAGFWGVMGGPGLGILPPFIEELNYPMPENCSGGTTGVFVNGRELHRKDLDLLAGRGLPPDRDRSYIVDITGRVIDEDTGEELDCLGKLAPT", "length": 773, "header": "tr|A0A1I9LNZ7-1|A0A1I9LNZ7_ARATH Computationally mapped isoform of Extra-large G-like protein, putative (DUF3133) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M371-1" }, "locus": { "chromosome": "3", "start_pos": 22818589, "end_pos": 22822030, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61670.2", "url": "https://www.ensemblgenomes.org/id/AT3G61670.2" }, { "database": "Ensembl Peptide", "id": "AT3G61670.2", "url": "https://www.ensemblgenomes.org/id/AT3G61670.2" } ] } }, { "isoform_ac": "Q9M371-1", "url": "https://www.uniprot.org/uniprotkb/Q9M371/entry#Q9M371-1", "sequence": { "sequence": "MADSTKVRLVRCPKCENLLSEPEDSPFFQCGGCFTVLRAKTKEREADSVSVKSVEDTAKPVSASSPEKAILDSSETSSDSDVPSLRHHHNVVPVDVESDPCSKPSSLEQGNRSILLGDKDDLKSQSGRQQDSGWDRFRKRTTKRCDSQSVINRLSTSRHPCDEGTSSSANYFPDSLLEFQKHLKDQSNEAIEQDRAGLLRQLEKIKEQLVQSCNVATDKSKEQAPSSSSASGLNKAPPMRFHSTGNHAVGGPSYYHQPQFPYNNNNINEAPMHHSLMHPSYGDPHRFPIHGRGPHPYFSGQYVGNNNNGHDLFDAYPQQNGHFHHSSCSCYHCYDNKYWRGSAPVVPDAPYNAGFYPHESVMGFAPPHNPRTYGSRGLQPHGRWPSNFSDAQMDALSRIRPPKVVLSGGSRHIRPLAGGAPFITCQNCFELLQLPKKPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLSTNTASTRQGEARVAADYTSDDYDLLGYVFHSLDDEPRDLPGLISDKSQDMQHVHSHSASLSEGELSSDSLTAKPLAEAHENFVDYSSINHDRSGAGSRSSRSEHDKVTLSKATAMRQNSMKEVSLASEMEVNFNDYSHRNSGVSKDQQQRAKKSGFASIVKKSFKDLTKSIQNDEGNKSNVSINGHPLTERLLRKAEKQAGVIQPGNYWYDYRAGFWGVMGGPGLGILPPFIEELNYPMPENCSGGTTGVFVNGRELHRKDLDLLAGRGLPPDRDRSYIVDITGRVIDEDTGEELDCLGKLAPTIEKLKRGFGMRLPKRTT", "length": 790, "header": "tr|Q9M371-1|Q9M371_ARATH Isoform 1 of Extra-large G-like protein, putative (DUF3133) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M371-1" }, "locus": { "chromosome": "3", "start_pos": 22818589, "end_pos": 22822023, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G61670.1", "url": "https://www.ensemblgenomes.org/id/AT3G61670.1" }, { "database": "Ensembl Peptide", "id": "AT3G61670.1", "url": "https://www.ensemblgenomes.org/id/AT3G61670.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 147, "end_pos": 147, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser147" }, { "start_pos": 41, "end_pos": 41, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "site_lbl": "Thr41" }, { "start_pos": 50, "end_pos": 50, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser50" }, { "start_pos": 53, "end_pos": 53, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ], "site_lbl": "Ser53" }, { "start_pos": 62, "end_pos": 62, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ], "site_lbl": "Ser62" }, { "start_pos": 632, "end_pos": 632, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser632" }, { "start_pos": 64, "end_pos": 64, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser64" }, { "start_pos": 65, "end_pos": 65, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser65" }, { "start_pos": 78, "end_pos": 78, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ], "site_lbl": "Ser78" }, { "start_pos": 98, "end_pos": 98, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser98" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M371", "url": "https://www.uniprot.org/uniprotkb/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.", "journal": "The Plant cell", "date": "2004-09", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M371", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M371", "url": "https://www.uniprot.org/uniprotkb/Q9M371" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De 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Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M375", "url": "https://www.uniprot.org/uniprotkb/Q9M375" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town 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Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M388", "url": "https://www.uniprot.org/uniprotkb/Q9M388" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M388", "url": "https://www.uniprot.org/uniprotkb/Q9M388" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G54160", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54160", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M388", "url": "https://www.uniprot.org/uniprotkb/Q9M388" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { 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"https://www.uniprot.org/uniprotkb/Q9M392", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M392-1", "url": "https://www.uniprot.org/uniprotkb/Q9M392-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELYLRLEIWANPENKKLS", "length": 203, "header": "sp|Q9M392-1|RTNLL_ARATH Isoform 1 of Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1 CANONICAL=Q9M392-1" }, "isoforms": [ { "isoform_ac": "Q9M392-1", "url": "https://www.uniprot.org/uniprotkb/Q9M392/entry#Q9M392-1", "sequence": { "sequence": "MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELYLRLEIWANPENKKLS", "length": 203, "header": "sp|Q9M392-1|RTNLL_ARATH Isoform 1 of Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1 CANONICAL=Q9M392-1" }, "locus": { "chromosome": "3", "start_pos": 20041126, "end_pos": 20042340, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G54120.1", "url": "https://www.ensemblgenomes.org/id/AT3G54120.1" }, { "database": "Ensembl Peptide", "id": "AT3G54120.1", "url": "https://www.ensemblgenomes.org/id/AT3G54120.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin 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Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M392", "url": "https://www.uniprot.org/uniprotkb/Q9M392" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Reticulon-like proteins in Arabidopsis thaliana: structural organization and ER localization.", "journal": "FEBS Lett.", "date": "2007", "authors": "Nziengui Hugues, Bouhidel Karim, Pillon David, Der Christophe, Marty Francis, Schoefs Beno\u00eet", "evidence": [ { "database": "UniProtKB", "id": "Q9M392", "url": "https://www.uniprot.org/uniprotkb/Q9M392" } ], "reference": [ { "type": "PubMed", "id": "17604024", "url": "https://glygen.org/publication/PubMed/17604024" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M392", "url": "https://www.uniprot.org/uniprotkb/Q9M392" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G54120", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G54120", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9M392", "url": "https://www.uniprot.org/uniprotkb/Q9M392" } ], "pmid": "" } ] }, { 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"monoisotopic_mass": 49289.0 }, "refseq": { "ac": "NP_190974", "name": "myosin-M heavy protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190974" }, "gene_names": [], "protein_names": [ { "name": "Myosin-M heavy protein", "type": "synonym", "evidence": [ { "id": "Q9M397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M397/entry#names_and_taxonomy" } ] }, { "name": "myosin-M heavy protein", "type": "synonym", "evidence": [ { "id": "NP_190974", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190974" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M397", "url": "https://www.uniprot.org/uniprotkb/Q9M397" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M397", "locus": {} } ], "crossref": [ { "id": "824573", "url": "https://www.ncbi.nlm.nih.gov/gene/824573", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "PTHR35117", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35117", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35117:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35117:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190974", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190974", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G54060", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G54060", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M397", "url": "https://www.uniprot.org/uniprotkb/Q9M397", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M397-1", "url": "https://www.uniprot.org/uniprotkb/Q9M397-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKSSRSKGSNLIGKGEVTPTQVAFIVDRYLHDNRFSETRALFRSEASSLISDSPIRNVPNSLMTLDAMLNHYVSLKKQKVSLDQEKLKLDQEKIRVQNLLQGMENVMNTYNASLTAPPPASAPTSQQKNHSISSSGLSQYNTLNGMSVSLLGNKRVDFGNFSTPSTSQSITGKRKGPEVSVTAPPVSRKSRITRATGTNKLPQADKAANNFTSETLAVAKNSASNELIGNGSSVVKCLFNKADSSVPTSSTCFRTPQKHASSGSDKSNSSQKEVTPTNTNCTIVTKERFTISPLKQITSYSVERSHLISFSSPVKSNLKMSNKRDHVKGKLNFDDTDTETCLEAPATADLVSTSPSGSEPEVDLFDMDFSNLDFSELLVDFDLGCEGSANHCLSLTPNQPTQTVSGSSPESGDCNLESDQPFLEYTSTVTDVIQISRCIDPLSNSSHSSLNTDKI", "length": 456, "header": "tr|Q9M397-1|Q9M397_ARATH Isoform 1 of Myosin-M heavy protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M397-1" }, "isoforms": [ { "isoform_ac": "Q9M397-1", "url": "https://www.uniprot.org/uniprotkb/Q9M397/entry#Q9M397-1", "sequence": { "sequence": 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"IPR051044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G55180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G55180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HPMVISF", "url": "https://omabrowser.org/oma/group/HPMVISF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M3D1", "url": "https://www.orthodb.org/?gene=Q9M3D1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11614", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11614", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12146", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12146", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191078", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191078", "database": "RefSeq", 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M3D9-1", "uniprot_ac": "Q9M3D9", "uniprot_id": "Q9M3D9_ARATH", "mass": { "chemical_mass": 54447.0, "monoisotopic_mass": 54447.0 }, "refseq": { "ac": "NP_190126", "name": "exostosin family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190126" }, "gene_names": [], "protein_names": [ { "name": "Exostosin family protein", "type": "synonym", "evidence": [ { "id": "Q9M3D9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M3D9/entry#names_and_taxonomy" } ] }, { "name": "exostosin family protein", "type": "synonym", "evidence": [ { "id": "NP_190126", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190126" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis 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"categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M3D9", "url": "https://www.uniprot.org/uniprotkb/Q9M3D9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M3D9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3D9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAMVEKNSSAIGYVARNLLLSLFVVTTILFALSCYFVLRSTAHNRFLSSTFPSKSFVDVRPEKANCRCVKDEKSSVIAGPLKVYMYNMDPEFHFGLLDWKKKEGSDSSVWPDIQKYIPPYPGGLNLQHSIEYWLTLDLLASEYENAPRSVAAKRVYNSSEADVIFVPFFSSLSYNRFSKVNPHQKTSRNKDLQGKLVTFLTAQEEWKRSGGRDHVVLAHHPNSMLDARNKLFPAMFILSDFGRYPPTVANVEKDVIAPYKHVIKAYENDTSGFDSRPILLYFQGAIYRKDGGFVRQELFYLLQDEKDVHFSFGSVRNGGINKASQGMHNSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPFEDVIDYSEFSVFVRTSDALKENFLVNLIRGITKEEWTRMWNRLKEVEKYYEFHFPSKVDDAVQMIWQAIARKVPGVKMRIHKSRRYSGSVSETGKESRWSSLIPRSFW", "length": 475, "header": "tr|Q9M3D9-1|Q9M3D9_ARATH Isoform 1 of Exostosin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M3D9-1" }, "isoforms": [ { "isoform_ac": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M3G8-1", "uniprot_ac": "Q9M3G8", "uniprot_id": "Q9M3G8_ARATH", "mass": { "chemical_mass": 23516.0, "monoisotopic_mass": 23516.0 }, "refseq": {}, "gene_names": [ { "name": "F25E4.50", "type": "synonym", "evidence": [ { "id": "Q9M3G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8" } ] }, { "name": "F25E4_50", "type": "synonym", "evidence": [ { "id": "Q9M3G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8" } ] } ], "protein_names": [ { "name": "Hydroxyproline-rich glycoprotein family protein", "type": "synonym", "evidence": [ { "id": "Q9M3G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], 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Classification" ] }, { "id": "AT4G11430", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G11430", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M3G8", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M3G8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKGKKFNCKRQPPPLATTAGHHRRSPPPATTGHHHRSPPPAITACHHRRPPLPATTAGHHRQLRPPSIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGHHHHRRSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTPITNTSDHHQLHPPPPATTITTTTISNQKD", "length": 219, "header": "tr|Q9M3G8-1|Q9M3G8_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M3G8-1" }, "isoforms": [ { "isoform_ac": "Q9M3G8-1", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8/entry#Q9M3G8-1", "sequence": { "sequence": "MKGKKFNCKRQPPPLATTAGHHRRSPPPATTGHHHRSPPPAITACHHRRPPLPATTAGHHRQLRPPSIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGHHHHRRSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTPITNTSDHHQLHPPPPATTITTTTISNQKD", "length": 219, "header": "tr|Q9M3G8-1|Q9M3G8_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M3G8-1" }, "locus": { "chromosome": "4", "start_pos": 6952799, "end_pos": 6954242, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G11430.1", "url": "https://www.ensemblgenomes.org/id/AT4G11430.1" }, { "database": "Ensembl Peptide", "id": "AT4G11430.1", "url": "https://www.ensemblgenomes.org/id/AT4G11430.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 134, "start_aa": "Thr", "end_pos": 134, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr134", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 165, "start_aa": "Thr", "end_pos": 165, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr165", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9M3G8", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M3G8", "url": "https://www.uniprot.org/uniprotkb/Q9M3G8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G11430", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G11430", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 193, "end_pos": 195, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { 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"total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M875-1", "uniprot_ac": "Q9M875", "uniprot_id": "Q9M875_ARATH", "mass": { "chemical_mass": 22099.0, "monoisotopic_mass": 22099.0 }, "refseq": {}, "gene_names": [ { "name": "F16B3.30", "type": "synonym", "evidence": [ { "id": "Q9M875", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M875" } ] }, { "name": "F16B3_30", "type": "synonym", "evidence": [ { "id": "Q9M875", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M875" } ] } ], "protein_names": [ { "name": "Glycine-rich protein family", "type": "synonym", "evidence": [ { "id": "Q9M875", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M875/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { 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"id": "AT3G02670.1", "url": "https://www.ensemblgenomes.org/id/AT3G02670.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M875", "url": "https://www.uniprot.org/uniprotkb/Q9M875" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M875", "url": "https://www.uniprot.org/uniprotkb/Q9M875" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G02670", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G02670", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": 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"count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M8J0-1", "uniprot_ac": "Q9M8J0", "uniprot_id": "Q9M8J0_ARATH", "mass": { "chemical_mass": 22797.0, "monoisotopic_mass": 22797.0 }, "refseq": {}, "gene_names": [ { "name": "F28L1.22", "type": "synonym", "evidence": [ { "id": "Q9M8J0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ] }, { "name": "F28L1_22", "type": "synonym", "evidence": [ { "id": "Q9M8J0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ] } ], "protein_names": [ { "name": "F-box associated ubiquitination effector family protein", "type": "synonym", "evidence": [ { "id": "Q9M8J0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8J0", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0", "locus": {} } ], "crossref": [ { "id": "819802", "url": "https://www.ncbi.nlm.nih.gov/gene/819802", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G06280", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06280", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PFFARIN", "url": "https://omabrowser.org/oma/group/PFFARIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M8J0", "url": "https://www.orthodb.org/?gene=Q9M8J0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G06280", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06280", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M8J0", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8J0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKQEEEDVKRRQRQKAATSLGFLHWEELKNHGDLSKVALNIALTTLVDDASTGFCIMNLVNLIVLRESSQGYLLTYEGKLASLASATYVKAFISLWVLEDAERHAWSFRTFSLTFPLDDPILDTFLELTGVTEAGEFVYAPTTLQSPFHALYFDPQRNSFRRVIYEGLADDEFRRRNRLGYERHHILPNHIESLISL", "length": 198, "header": "tr|Q9M8J0-1|Q9M8J0_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8J0-1" }, "isoforms": [ { "isoform_ac": "Q9M8J0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0/entry#Q9M8J0-1", "sequence": { "sequence": "MEKQEEEDVKRRQRQKAATSLGFLHWEELKNHGDLSKVALNIALTTLVDDASTGFCIMNLVNLIVLRESSQGYLLTYEGKLASLASATYVKAFISLWVLEDAERHAWSFRTFSLTFPLDDPILDTFLELTGVTEAGEFVYAPTTLQSPFHALYFDPQRNSFRRVIYEGLADDEFRRRNRLGYERHHILPNHIESLISL", "length": 198, "header": "tr|Q9M8J0-1|Q9M8J0_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8J0-1" }, "locus": { "chromosome": "3", "start_pos": 1898155, "end_pos": 1898751, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06280.1", "url": "https://www.ensemblgenomes.org/id/AT3G06280.1" }, { "database": "Ensembl Peptide", "id": "AT3G06280.1", "url": "https://www.ensemblgenomes.org/id/AT3G06280.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M8J0", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8J0", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G06280", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06280", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M8J0", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M8J0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J0" }, { "id": "PF08268", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box associated beta-propeller type 3", "eco_id": "ECO_0000259", "start_pos": 69, "end_pos": 192, "start_aa": "Ser", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M8J7-1", "uniprot_ac": "Q9M8J7", "uniprot_id": "Q9M8J7_ARATH", "mass": { "chemical_mass": 94475.0, "monoisotopic_mass": 94475.0 }, "refseq": {}, "gene_names": [ { "name": "F28L1.15", "type": "synonym", "evidence": [ { "id": "Q9M8J7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7" } ] }, { "name": "F28L1_15", "type": "synonym", "evidence": [ { "id": "Q9M8J7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7" } ] } ], "protein_names": [ { "name": "ARM repeat superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9M8J7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8J7", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7", "locus": {} } ], "crossref": [ { "id": "AT3G06210", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G06210", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819795", "url": "https://www.ncbi.nlm.nih.gov/gene/819795", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G06210", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06210", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RHTTTIH", "url": "https://omabrowser.org/oma/group/RHTTTIH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33115", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33115", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33115:SF76", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33115:SF76", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT3G06210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLM7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8J7", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8J7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYSENIGEDDRSIHLQVLELQKLEEARGSSDTVLDYRNSVEKGDSGETADAASVSSAIAFHRSTSPAPEQKLTLFALRLAIIEKIATNLGTLGFIWATVVLLGGFAITLEKSDFWFITIILLIEGTRIFSRSHELEWQHQATWTVSGVGISSFRVLQSSSISLLRNLKRISDGIFKPILDNGLREATTRIGRQEIFDRRTTLTWKNSEVPLLPYARWLYISSYVSRILYWLQLLSASACVALSSYKLVMHNYGDVQDGDLDKRNRQAALSIFYSLALAEALLFLAEKAYWEWEVSVCHLLENVTRECGFGVTGMVSIKRFFYDAYSKSVNGSIFDGVKMDMVSFAMDLLGSNCSDEQLIGARILRQFAVNERFAEDTLEKIGINLPVIERLVEMLNWKDLQEEEIRRSAAEILSKLAGKKQNSLRVAGISGAMESISSLLQNTRSLGEAPDEIGEKKLFHDHHLHYDFWRFNNLGLLILKKLSRDHDNCGKIGNTRGLLPKIIDFTHTDATLLKDENADMVLSRVLTVKRSLQLVKMLVSTSGNTGKCLRREISEIVFTISNLRDVLRHGVRYPKLQKLGIEILSFLALETDGRERIAVTGGVLKELFSIFLKSKIHGDENEKRVRMAAGEAIGMLALESRSNCIQILKLGVFGRLVEALEVPLIRVNAARVLRNLCIYSGHECFLDLRFIKTAAPTVLKSITSGDNKLLEVMLGLAAQVFKFMSSEEANIVLTDSGIKKQELANSLVSILKKHDKPAIKVPRIRRFVIELAIWMMEDDVENVGMFRDLGMEKELVKVLETTAELENFDVFSGTVGVSRQSRTVHWLAELALKMLEDEHS", "length": 840, "header": "tr|Q9M8J7-1|Q9M8J7_ARATH Isoform 1 of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8J7-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLM7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7/entry#A0A1I9LLM7-1", "sequence": { "sequence": "MYSENIGEDDRSIHLQVLELQKLEEARGSSDTVLDYRNSVEKGDSGETADAASVSSAIAFHRSTSPAPEQKLTLFALRLAIIEKIATNLGTLGFIWATVVLLGGFAITLEKSDFWFITIILLIEGTRIFSRSHELEWQHQATWTVSGVGISSFRVLQSSSISLLRNLKRISDGIFKPILDNGLREATTRIGRQEIFDRRTTLTWKNSEVPLLPYARWLYISSYVSRILYWLQLLSASACVALSSYKLVMHNYGDVQDGDLDKRNRQAALSIFYSLALAEALLFLAEKAYWEWEVSVCHLLENVTRECGFGVTGMVSIKRFFYDAYSKSVNGSIFDGVKMDMVSFAMDLLGSNCSDEQLIGARILRQFAVNERFAEDTLEKIGINLPVIERLVEMLNWKDLQEEEIRRSAAEILSKLAGKKQNSLRVAGISGAMESISSLLQNTRSLGEAPDEIGEKKLFHDHHLHYDFWRFNNLGLLILKKLSRDHDNCGKIGNTRGLLPKIIDFTHTDATLLKDENADMVLSRVLTVKRSLQLVKMLVSTSGNTGKCLRREISEIVFTISNLRDVLRHGVRYPKLQKLGIEILSFLALETDGRERIAVTGGVLKELFSIFLKSKIHGDENEKRVRMAAGEAIGMLALESRSNCIQILKLGVFGRLVEALEVPLIRVNAARVLRNLCIYSGHECFLDLRFIKTAAPTVSMSVCRYKYCVEPPKD", "length": 714, "header": "tr|A0A1I9LLM7-1|A0A1I9LLM7_ARATH Computationally mapped isoform of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8J7-1" }, "locus": { "chromosome": "3", "start_pos": 1880011, "end_pos": 1883491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06210.2", "url": "https://www.ensemblgenomes.org/id/AT3G06210.2" }, { "database": "Ensembl Peptide", "id": "AT3G06210.2", "url": "https://www.ensemblgenomes.org/id/AT3G06210.2" } ] } }, { "isoform_ac": "Q9M8J7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7/entry#Q9M8J7-1", "sequence": { "sequence": "MYSENIGEDDRSIHLQVLELQKLEEARGSSDTVLDYRNSVEKGDSGETADAASVSSAIAFHRSTSPAPEQKLTLFALRLAIIEKIATNLGTLGFIWATVVLLGGFAITLEKSDFWFITIILLIEGTRIFSRSHELEWQHQATWTVSGVGISSFRVLQSSSISLLRNLKRISDGIFKPILDNGLREATTRIGRQEIFDRRTTLTWKNSEVPLLPYARWLYISSYVSRILYWLQLLSASACVALSSYKLVMHNYGDVQDGDLDKRNRQAALSIFYSLALAEALLFLAEKAYWEWEVSVCHLLENVTRECGFGVTGMVSIKRFFYDAYSKSVNGSIFDGVKMDMVSFAMDLLGSNCSDEQLIGARILRQFAVNERFAEDTLEKIGINLPVIERLVEMLNWKDLQEEEIRRSAAEILSKLAGKKQNSLRVAGISGAMESISSLLQNTRSLGEAPDEIGEKKLFHDHHLHYDFWRFNNLGLLILKKLSRDHDNCGKIGNTRGLLPKIIDFTHTDATLLKDENADMVLSRVLTVKRSLQLVKMLVSTSGNTGKCLRREISEIVFTISNLRDVLRHGVRYPKLQKLGIEILSFLALETDGRERIAVTGGVLKELFSIFLKSKIHGDENEKRVRMAAGEAIGMLALESRSNCIQILKLGVFGRLVEALEVPLIRVNAARVLRNLCIYSGHECFLDLRFIKTAAPTVLKSITSGDNKLLEVMLGLAAQVFKFMSSEEANIVLTDSGIKKQELANSLVSILKKHDKPAIKVPRIRRFVIELAIWMMEDDVENVGMFRDLGMEKELVKVLETTAELENFDVFSGTVGVSRQSRTVHWLAELALKMLEDEHS", "length": 840, "header": "tr|Q9M8J7-1|Q9M8J7_ARATH Isoform 1 of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8J7-1" }, "locus": { "chromosome": "3", "start_pos": 1879985, "end_pos": 1883491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06210.1", "url": "https://www.ensemblgenomes.org/id/AT3G06210.1" }, { "database": "Ensembl Peptide", "id": "AT3G06210.1", "url": "https://www.ensemblgenomes.org/id/AT3G06210.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 823, "end_pos": 823, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M8J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8J7" } ], "site_lbl": "Thr823" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M8J7", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8J7", "url": "https://www.uniprot.org/uniprotkb/Q9M8J7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G06210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06210", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 302, "end_pos": 304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 330, "end_pos": 332, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 823 ], "sequon_annotation_sites": [ { "start_pos": 302, "end_pos": 304 }, { "start_pos": 330, "end_pos": 332 }, { "start_pos": 352, "end_pos": 354 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M8K0-1", "uniprot_ac": "Q9M8K0", "uniprot_id": "Q9M8K0_ARATH", "mass": { "chemical_mass": 26467.0, "monoisotopic_mass": 26467.0 }, "refseq": {}, "gene_names": [ { "name": "F28L1.12", "type": "synonym", "evidence": [ { "id": "Q9M8K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0" } ] }, { "name": "F28L1_12", "type": "synonym", "evidence": [ { "id": "Q9M8K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0" } ] } ], "protein_names": [ { "name": "Ribosomal protein L34e superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9M8K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8K0", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0", "locus": {} } ], "crossref": [ { "id": "AT3G06180", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G06180", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819792", "url": "https://www.ncbi.nlm.nih.gov/gene/819792", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR044196", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044196", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G06180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DEEVPWN", "url": "https://omabrowser.org/oma/group/DEEVPWN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47479", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47479", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47479:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47479:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28125", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28125", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G06180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLD3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLD3-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLD3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8K0", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8K0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLHLLLLSDEEHSTTNSMPPSSSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLALKGGVDHR", "length": 241, "header": "tr|Q9M8K0-1|Q9M8K0_ARATH Isoform 1 of Ribosomal protein L34e superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8K0-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLD3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0/entry#A0A1I9LLD3-1", "sequence": { "sequence": "MLHLLLLSDEEHSTTNSMPPSSSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGDVVALLLSLKVGVLNEAGVIKNRKRTWL", "length": 202, "header": "tr|A0A1I9LLD3-1|A0A1I9LLD3_ARATH Computationally mapped isoform of Ribosomal protein L34e superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8K0-1" }, "locus": { "chromosome": "3", "start_pos": 1871558, "end_pos": 1873771, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06180.2", "url": "https://www.ensemblgenomes.org/id/AT3G06180.2" }, { "database": "Ensembl Peptide", "id": "AT3G06180.2", "url": "https://www.ensemblgenomes.org/id/AT3G06180.2" } ] } }, { "isoform_ac": "Q9M8K0-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8K0/entry#Q9M8K0-1", "sequence": { "sequence": "MLHLLLLSDEEHSTTNSMPPSSSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLALKGGVDHR", "length": 241, "header": "tr|Q9M8K0-1|Q9M8K0_ARATH Isoform 1 of Ribosomal protein L34e superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8K0-1" }, "locus": { "chromosome": "3", "start_pos": 1871577, "end_pos": 1874044, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06180.1", "url": "https://www.ensemblgenomes.org/id/AT3G06180.1" }, { "database": "Ensembl Peptide", "id": "AT3G06180.1", "url": "https://www.ensemblgenomes.org/id/AT3G06180.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], 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"https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser276" }, { "start_pos": 277, "end_pos": 277, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser277" }, { "start_pos": 286, "end_pos": 286, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": 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D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M8M1", "url": "https://www.uniprot.org/uniprotkb/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.", "journal": "J. Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9M8M1", "url": "https://www.uniprot.org/uniprotkb/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9M8M1", "url": "https://www.uniprot.org/uniprotkb/Q9M8M1" }, { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment.", "journal": "The Plant journal : for cell and molecular biology", "date": "2010-07-01", "authors": "Chen Yanmei, Hoehenwarter Wolfgang, Weckwerth Wolfram", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": 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Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] }, { "title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9M8M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8M1" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": 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Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M8N0", "url": "https://www.uniprot.org/uniprotkb/Q9M8N0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8N0", "url": "https://www.uniprot.org/uniprotkb/Q9M8N0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G80630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80630", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9M8N0", "url": "https://www.uniprot.org/uniprotkb/Q9M8N0" } ], "pmid": "" }, { "name": "SCF ubiquitin ligase complex", "id": "GO:0019005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019005", "evidence": [ { "database": "UniProtKB", "id": "Q9M8N0", "url": "https://www.uniprot.org/uniprotkb/Q9M8N0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0031146", "url": 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telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9M8U2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8U2" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U2", "url": "https://www.uniprot.org/uniprotkb/Q9M8U2" } ], "reference": [ { "type": "PubMed", "id": 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"OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M8U4", "url": "https://www.orthodb.org/?gene=Q9M8U4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31293:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31293:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M8U4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M8U4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT3G03030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G03030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNU1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNU1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8U4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWEREEILDSFLDFVERVLSLQGNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADLELIIDFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCDDKLQKLLPCFPVIEELRLVGMEWIDSHVTVSCATLTNQLLLSSTGSRTSKNPKSVSFDTPNLLSLAYSDLVAEDYPLVNMKSLFKARIILGVDDDQIARMRAPTNYLSEDDVVRRFGNVVKLMKGIQNVQQLHLHSDTLEVLSMCCESMPVFNNVKTLGIKSDYDRGWQAVPALLRNCPHLETLTFEGLVHHVTDKCGDACDCIFRKDKGRSLKSCPVKVVEIKEFRVTMKEMHLIEHFLDNFPCLKEMKIYREEYDPSPFGNDPQVDDLILDMIEEYKDIYSCNVQLLEPCDKWDEQ", "length": 474, "header": "sp|Q9M8U4-1|FBL41_ARATH Isoform 1 of F-box/LRR-repeat protein At3g03030 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M8U4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNU1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4/entry#A0A1I9LNU1-1", "sequence": { "sequence": "MDLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWEREEILDSFLDFVERVLSLQGNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADLELIIDFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCDDKLQKLLPCFPVIEELRLVGMEWIDSHVTVSCATLTNQLLLSSTGSRTSKNPKSVSFDTPNLLSLAYSDLVAEDYPLVNMKSLFKARIILGVDDDQIARMRAPTNYLSEDDVVRRFGNVVKLMKGIQNVQQLHLHSDTLEVSFPFSSFWSSCNVLIAR", "length": 334, "header": "tr|A0A1I9LNU1-1|A0A1I9LNU1_ARATH Computationally mapped isoform of F-box/RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8U4-1" }, "locus": { "chromosome": "3", "start_pos": 682054, "end_pos": 684083, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03030.2", "url": "https://www.ensemblgenomes.org/id/AT3G03030.2" }, { "database": "Ensembl Peptide", "id": "AT3G03030.2", "url": "https://www.ensemblgenomes.org/id/AT3G03030.2" } ] } }, { "isoform_ac": "Q9M8U4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4/entry#Q9M8U4-1", "sequence": { "sequence": "MDLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWEREEILDSFLDFVERVLSLQGNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADLELIIDFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCDDKLQKLLPCFPVIEELRLVGMEWIDSHVTVSCATLTNQLLLSSTGSRTSKNPKSVSFDTPNLLSLAYSDLVAEDYPLVNMKSLFKARIILGVDDDQIARMRAPTNYLSEDDVVRRFGNVVKLMKGIQNVQQLHLHSDTLEVLSMCCESMPVFNNVKTLGIKSDYDRGWQAVPALLRNCPHLETLTFEGLVHHVTDKCGDACDCIFRKDKGRSLKSCPVKVVEIKEFRVTMKEMHLIEHFLDNFPCLKEMKIYREEYDPSPFGNDPQVDDLILDMIEEYKDIYSCNVQLLEPCDKWDEQ", "length": 474, "header": "sp|Q9M8U4-1|FBL41_ARATH Isoform 1 of F-box/LRR-repeat protein At3g03030 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M8U4-1" }, "locus": { "chromosome": "3", "start_pos": 682054, "end_pos": 684083, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03030.1", "url": "https://www.ensemblgenomes.org/id/AT3G03030.1" }, { "database": "Ensembl Peptide", "id": "AT3G03030.1", "url": "https://www.ensemblgenomes.org/id/AT3G03030.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G03030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G03030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of seed germination", "id": "GO:0010029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010029", "evidence": [ { "database": "UniProtKB", "id": "Q9M8U4", "url": "https://www.uniprot.org/uniprotkb/Q9M8U4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9M8U4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 474, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9M8U4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9M8U4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9M8X0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8X0" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9M8X0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8X0" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9M8X0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8X0" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed 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"MYRYALGYVNKNNSCRSHKVLRFIDHYISSAVNHAPENRFSWYEIYDIETDLWTTLDVPPYWIVSCYQRGVSLKGNTYFCATKSNAINKIDDHIICFDFTSERFGPLLRLPFSAGHDDYVTLSCVREEKLAALLTHNDWNPYEFEIWITTKIEYDKVSWSKILEMDTGPLADMPIAYIHGSFFIDEEKKVSMVFDHHRVNIIGKTGYFRELDLRVHVAGIKCRPHLCPYVPNSMQIKQPPGGKRKRKPILEQRRYDQNMLRVAAFIKRTKQEDNKWKKRVLEGLKKQTNFKA", "length": 292, "header": "tr|Q9M8Y1-1|Q9M8Y1_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8Y1-1" }, "isoforms": [ { "isoform_ac": "Q9M8Y1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Y1/entry#Q9M8Y1-1", "sequence": { "sequence": "MYRYALGYVNKNNSCRSHKVLRFIDHYISSAVNHAPENRFSWYEIYDIETDLWTTLDVPPYWIVSCYQRGVSLKGNTYFCATKSNAINKIDDHIICFDFTSERFGPLLRLPFSAGHDDYVTLSCVREEKLAALLTHNDWNPYEFEIWITTKIEYDKVSWSKILEMDTGPLADMPIAYIHGSFFIDEEKKVSMVFDHHRVNIIGKTGYFRELDLRVHVAGIKCRPHLCPYVPNSMQIKQPPGGKRKRKPILEQRRYDQNMLRVAAFIKRTKQEDNKWKKRVLEGLKKQTNFKA", "length": 292, "header": "tr|Q9M8Y1-1|Q9M8Y1_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M8Y1-1" }, "locus": { "chromosome": "3", "start_pos": 1121950, "end_pos": 1122828, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G04250.1", "url": "https://www.ensemblgenomes.org/id/AT3G04250.1" }, { "database": "Ensembl Peptide", "id": "AT3G04250.1", "url": "https://www.ensemblgenomes.org/id/AT3G04250.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 255, "end_pos": 255, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M8Y1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8Y1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Tyr255" }, { "start_pos": 72, "end_pos": 72, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", 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} ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9M8Y1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M8Y1" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M8Y1", "url": 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}, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M8Y6-1", "uniprot_ac": "Q9M8Y6", "uniprot_id": "Q9M8Y6_ARATH", "mass": { "chemical_mass": 10847.0, "monoisotopic_mass": 10847.0 }, "refseq": {}, "gene_names": [ { "name": "T6K12.8", "type": "synonym", "evidence": [ { "id": "Q9M8Y6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8Y6" } ] }, { "name": "T6K12_8", "type": "synonym", "evidence": [ { "id": "Q9M8Y6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8Y6" } ] } ], "protein_names": [ { "name": "RmlC-like cupins superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9M8Y6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8Y6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": 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"MFGCDCFYWSRGISELDSESSEPKPFSLPAPLPSWPQGKGFATGRISLGEIEVVKITKFHRVWSSDSSHDKSKRATFYRADDIPEGFHCLGHYCQPTDQPLRGYVLAARTSKAVNADDFPPLKKPVSYSLVWSADSEKNGGGYFWLPNPPVGYRAMGVIVTHEPGEPETEEVRCVREDLTESCETSEMILEVGSSKKSNGSSSPFSVWSTRPCERGMLSQGVAVGSFFCCTYDLSSERTVPDIGCLKNLDPTLHAMPNLDQVHAVIEHFGPTVYFHPEEAYMPSSVQWFFKNGALLYRSGKSEGQPINSTGSNLPAGGCNDMDFWIDLPEDEEAKSNLKKGNLESSELYVHVKPALGGTFTDIVMWIFCPFNGPATLKIGLFTLPMTRIGEHVGDWEHFTFRICNFSGELWQMFFSQHSGGGWVDASDIEFVKDNKPAVYSSKHGHASFPHPGMYLQGSSKLGIGVRNDVAKSKYIVDSSQRYVIVAAEYLGKGAVIEPCWLQYMREWGPTIAYDSGSEINKIMNLLPLVVRFSIENIVDLFPIALYGEEGPTGPKEKDNWEGDEMC", "length": 567, "header": "tr|Q9M8Z1-1|Q9M8Z1_ARATH Isoform 1 of Vacuolar sorting-associated protein (DUF946) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8Z1-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LTD2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z1/entry#A0A1I9LTD2-1", "sequence": { "sequence": "MLKVMYFSVTVNLFAGKGFATGRISLGEIEVVKITKFHRVWSSDSSHDKSKRATFYRADDIPEGFHCLGHYCQPTDQPLRGYVLAARTSKAVNADDFPPLKKPVSYSLVWSADSEKNGGGYFWLPNPPVGYRAMGVIVTHEPGEPETEEVRCVREDLTESCETSEMILEVGSSKKSNGSSSPFSVWSTRPCERGMLSQGVAVGSFFCCTYDLSSERTVPDIGCLKNLDPTLHAMPNLDQVHAVIEHFGPTVYFHPEEAYMPSSVQWFFKNGALLYRSGKSEGQPINSTGSNLPAGGCNDMDFWIDLPEDEEAKSNLKKGNLESSELYVHVKPALGGTFTDIVMWIFCPFNGPATLKIGLFTLPMTRIGEHVGDWEHFTFRICNFSGELWQMFFSQHSGGGWVDASDIEFVKDNKPAVYSSKHGHASFPHPGMYLQGSSKLGIGVRNDVAKSKYIVDSSQRYVIVAAEYLGKGAVIEPCWLQYMREWGPTIAYDSGSEINKIMNLLPLVVRFSIENIVDLFPIALYGEEGPTGPKEKDNWEGDEMC", "length": 545, "header": "tr|A0A1I9LTD2-1|A0A1I9LTD2_ARATH Computationally mapped isoform of Vacuolar sorting-associated protein (DUF946) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8Z1-1" }, "locus": { "chromosome": "3", "start_pos": 1153723, "end_pos": 1156876, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G04350.2", "url": "https://www.ensemblgenomes.org/id/AT3G04350.2" }, { "database": "Ensembl Peptide", "id": "AT3G04350.2", "url": "https://www.ensemblgenomes.org/id/AT3G04350.2" } ] } }, { "isoform_ac": "Q9M8Z1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z1/entry#Q9M8Z1-1", "sequence": { "sequence": "MFGCDCFYWSRGISELDSESSEPKPFSLPAPLPSWPQGKGFATGRISLGEIEVVKITKFHRVWSSDSSHDKSKRATFYRADDIPEGFHCLGHYCQPTDQPLRGYVLAARTSKAVNADDFPPLKKPVSYSLVWSADSEKNGGGYFWLPNPPVGYRAMGVIVTHEPGEPETEEVRCVREDLTESCETSEMILEVGSSKKSNGSSSPFSVWSTRPCERGMLSQGVAVGSFFCCTYDLSSERTVPDIGCLKNLDPTLHAMPNLDQVHAVIEHFGPTVYFHPEEAYMPSSVQWFFKNGALLYRSGKSEGQPINSTGSNLPAGGCNDMDFWIDLPEDEEAKSNLKKGNLESSELYVHVKPALGGTFTDIVMWIFCPFNGPATLKIGLFTLPMTRIGEHVGDWEHFTFRICNFSGELWQMFFSQHSGGGWVDASDIEFVKDNKPAVYSSKHGHASFPHPGMYLQGSSKLGIGVRNDVAKSKYIVDSSQRYVIVAAEYLGKGAVIEPCWLQYMREWGPTIAYDSGSEINKIMNLLPLVVRFSIENIVDLFPIALYGEEGPTGPKEKDNWEGDEMC", "length": 567, "header": "tr|Q9M8Z1-1|Q9M8Z1_ARATH Isoform 1 of Vacuolar sorting-associated protein (DUF946) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8Z1-1" }, "locus": { "chromosome": "3", "start_pos": 1153723, "end_pos": 1156876, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G04350.1", "url": "https://www.ensemblgenomes.org/id/AT3G04350.1" }, { "database": "Ensembl Peptide", "id": "AT3G04350.1", "url": "https://www.ensemblgenomes.org/id/AT3G04350.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 553, "start_aa": "Thr", "end_pos": 553, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr553", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of 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Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G04350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G04350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF176", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF176", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187356", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187356", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07000", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07000", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M8Z9", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M8Z9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPITDQPMDQPKQKVKIPCNHMLLYIHLTQSYSYCAVCNGDYGLCYYCSRCNFQAHSECIEWPDTIDHPSHSRHPLKKVSPGTIDYTDGKCHFCREELVDPMYHCSLCNFSIDVNCWRHPPQRTIYQPKSHEHTFTLMPRKITFTCNACGMLGDCNPYFCFECGFMLHKDCIDLPRVININRHDHRISRTYHLGHGDWGSCGVCRKEIDWSLGAYSCKRCPNYAVHSKCAIREDVWNGEELEDVPEEEEEIEDPYKVVNDKEIIHFCHEEHNLRLGGDDDVTGYEKMLCDACITPISSDPFFKCVQCEFFLHKVCASLPRRKRNIMHTEKLDLQVTKAGEYNKCISCRKIFDGFRYCSRFEKFDVRCGSISEPFHHELHPHPLYHILSAAEKLKLCGACGKYLHYVLSCTVCEFNLGMDCATLPRKVRHICDAHDLSLHHVPGNSKGQQLWCDSCEGKLDPSVWFYGCDDCGSTLHIKCVLGDFNHLKPGKKYGEAELVVNDGMTRPFCISCKKRCSFPSFLKATCPNTLCEQRWGFPSFLKAASPDSFVLFACSMDCAYDKYFMLWFYEVDY", "length": 574, "header": "tr|Q9M8Z9-1|Q9M8Z9_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8Z9-1" }, "isoforms": [ { "isoform_ac": "Q9M8Z9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9/entry#Q9M8Z9-1", "sequence": { "sequence": "MEPITDQPMDQPKQKVKIPCNHMLLYIHLTQSYSYCAVCNGDYGLCYYCSRCNFQAHSECIEWPDTIDHPSHSRHPLKKVSPGTIDYTDGKCHFCREELVDPMYHCSLCNFSIDVNCWRHPPQRTIYQPKSHEHTFTLMPRKITFTCNACGMLGDCNPYFCFECGFMLHKDCIDLPRVININRHDHRISRTYHLGHGDWGSCGVCRKEIDWSLGAYSCKRCPNYAVHSKCAIREDVWNGEELEDVPEEEEEIEDPYKVVNDKEIIHFCHEEHNLRLGGDDDVTGYEKMLCDACITPISSDPFFKCVQCEFFLHKVCASLPRRKRNIMHTEKLDLQVTKAGEYNKCISCRKIFDGFRYCSRFEKFDVRCGSISEPFHHELHPHPLYHILSAAEKLKLCGACGKYLHYVLSCTVCEFNLGMDCATLPRKVRHICDAHDLSLHHVPGNSKGQQLWCDSCEGKLDPSVWFYGCDDCGSTLHIKCVLGDFNHLKPGKKYGEAELVVNDGMTRPFCISCKKRCSFPSFLKATCPNTLCEQRWGFPSFLKAASPDSFVLFACSMDCAYDKYFMLWFYEVDY", "length": 574, "header": "tr|Q9M8Z9-1|Q9M8Z9_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M8Z9-1" }, "locus": { "chromosome": "3", "start_pos": 2209405, "end_pos": 2211515, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07000.1", "url": "https://www.ensemblgenomes.org/id/AT3G07000.1" }, { "database": "Ensembl Peptide", "id": "AT3G07000.1", "url": "https://www.ensemblgenomes.org/id/AT3G07000.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, 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Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z9", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z9", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07000", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07000", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z9", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M8Z9", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 110, "end_pos": 112, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M8Z9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M8Z9" }, { "id": "SM00249", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00249" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Zinc finger PHD-type", "eco_id": "ECO_0000259", "start_pos": 35, "end_pos": 96, "start_aa": "Tyr", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 110, "end_pos": 112 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M900-1", "uniprot_ac": "Q9M900", "uniprot_id": "Q9M900_ARATH", "mass": { "chemical_mass": 62108.0, "monoisotopic_mass": 62108.0 }, "refseq": { "ac": "NP_187355", "name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": 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"https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G06990", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819884", "url": "https://www.ncbi.nlm.nih.gov/gene/819884", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G06990", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06990", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF176", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF176", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187355", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187355", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G06990", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06990", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M900", "url": "https://www.uniprot.org/uniprotkb/Q9M900", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M900-1", "url": "https://www.uniprot.org/uniprotkb/Q9M900-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQPKQKVKIPCNHPLEYIQLKGGGWPGSYDYDINTCAGCDEDYGFCYYCASCSFRAHSECIEWPDTIDHPSHSRHPLKKVSPGTIDYTDGKCHFCREELVDPMYHCSLCNFSVDVNCWRHPPQRTIYQPKSHEHTFTLMPRKITFTCNACGMLDCIDLPRVININRHDHRISRTYHLGHGDWDLCGLCRKEIDWSFGAFTCKRCPSYAVHSKCAVRKDVWDGEELEDVPEEEEEIEDPYKVINDKEIIHFSHEEHSLRLGGDDNVTGYEKMLCDACITPISSDPFFKCVQCEFFLHKECASLPRRKRSILHIDKLDLRVKNKAGNHYKCRSCQKLFDGFRYKTTFDKFDVRCGSISEPFHHELHPHPLYHIFSPEEKSHICGACDRPTQYVLSCTVCEFHLGMDCGTLPTKVKHTCDGHDLSLHHGAGNTDGPLWCDICEEETDPSVWFYGCDDCVSTLHIKCVLGDMYHFKPGNKYGKAELVANDGMTRPFCIVCEERCMFPSFLKATVSDSTLVYACSMNCAYDSYWKKWYYDESG", "length": 539, "header": "tr|Q9M900-1|Q9M900_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M900-1" }, "isoforms": [ { "isoform_ac": "Q9M900-1", "url": "https://www.uniprot.org/uniprotkb/Q9M900/entry#Q9M900-1", "sequence": { "sequence": "MDQPKQKVKIPCNHPLEYIQLKGGGWPGSYDYDINTCAGCDEDYGFCYYCASCSFRAHSECIEWPDTIDHPSHSRHPLKKVSPGTIDYTDGKCHFCREELVDPMYHCSLCNFSVDVNCWRHPPQRTIYQPKSHEHTFTLMPRKITFTCNACGMLDCIDLPRVININRHDHRISRTYHLGHGDWDLCGLCRKEIDWSFGAFTCKRCPSYAVHSKCAVRKDVWDGEELEDVPEEEEEIEDPYKVINDKEIIHFSHEEHSLRLGGDDNVTGYEKMLCDACITPISSDPFFKCVQCEFFLHKECASLPRRKRSILHIDKLDLRVKNKAGNHYKCRSCQKLFDGFRYKTTFDKFDVRCGSISEPFHHELHPHPLYHIFSPEEKSHICGACDRPTQYVLSCTVCEFHLGMDCGTLPTKVKHTCDGHDLSLHHGAGNTDGPLWCDICEEETDPSVWFYGCDDCVSTLHIKCVLGDMYHFKPGNKYGKAELVANDGMTRPFCIVCEERCMFPSFLKATVSDSTLVYACSMNCAYDSYWKKWYYDESG", "length": 539, "header": "tr|Q9M900-1|Q9M900_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M900-1" }, "locus": { "chromosome": "3", "start_pos": 2206387, "end_pos": 2208058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06990.1", "url": "https://www.ensemblgenomes.org/id/AT3G06990.1" }, { "database": "Ensembl Peptide", "id": "AT3G06990.1", "url": "https://www.ensemblgenomes.org/id/AT3G06990.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M900", "url": "https://www.uniprot.org/uniprotkb/Q9M900" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M900", "url": "https://www.uniprot.org/uniprotkb/Q9M900" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G06990", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06990", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M900", "url": "https://www.uniprot.org/uniprotkb/Q9M900" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M900", "url": "https://www.uniprot.org/uniprotkb/Q9M900" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 111, "end_pos": 113, "annotation": "n_glycosylation_sequon" }, { "start_pos": 265, "end_pos": 267, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], 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"uniprot_id": "PP217_ARATH", "mass": { "chemical_mass": 98339.0, "monoisotopic_mass": 98339.0 }, "refseq": { "ac": "NP_001319489", "name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319489" }, "gene_names": [ { "name": "F17A9.7", "type": "synonym", "evidence": [ { "id": "Q9M907", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M907" } ] } ], "protein_names": [ { "name": "Pentatricopeptide repeat-containing protein At3g06920", "type": "recommended", "evidence": [ { "id": "Q9M907", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M907/entry#names_and_taxonomy" } ] }, { "name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001319489", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319489" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M907", "url": "https://www.uniprot.org/uniprotkb/Q9M907" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M907", "locus": {} } ], "crossref": [ { "id": "Q9M907", "url": "https://alphafold.ebi.ac.uk/entry/Q9M907", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G06920", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G06920", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819877", "url": "https://www.ncbi.nlm.nih.gov/gene/819877", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050872", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050872", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G06920", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06920", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CYNTMIE", "url": "https://omabrowser.org/oma/group/CYNTMIE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LMU5", "url": "https://www.orthodb.org/?gene=A0A1I9LMU5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M907", "url": "https://www.orthodb.org/?gene=Q9M907", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46128", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46128", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46128:SF73", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46128:SF73", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46128:SF82", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46128:SF82", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13812", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13812", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M907", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M907", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001319489", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319489", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G06920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LMU5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LMU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M907", "url": "https://www.uniprot.org/uniprotkb/Q9M907", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M907-1", "url": "https://www.uniprot.org/uniprotkb/Q9M907-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVGFARTKFCKNLSSLSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW", "length": 871, "header": "sp|Q9M907-1|PP217_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M907-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LMU5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M907/entry#A0A1I9LMU5-1", "sequence": { "sequence": "MRMLLRPGIIFHTDTKSSRVVTVCKNLSSLSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW", "length": 885, "header": "tr|A0A1I9LMU5-1|A0A1I9LMU5_ARATH Computationally mapped isoform of Tetratricopeptide repeat (TPR)-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M907-1" }, "locus": { "chromosome": "3", "start_pos": 2181346, "end_pos": 2185126, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06920.3", "url": "https://www.ensemblgenomes.org/id/AT3G06920.3" }, { "database": "Ensembl Peptide", "id": "AT3G06920.3", "url": "https://www.ensemblgenomes.org/id/AT3G06920.3" } ] } }, { "isoform_ac": "Q9M907-1", "url": "https://www.uniprot.org/uniprotkb/Q9M907/entry#Q9M907-1", "sequence": { "sequence": "MVGFARTKFCKNLSSLSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW", "length": 871, "header": "sp|Q9M907-1|PP217_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g06920 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"evidence": [ { "id": "Q9M9H2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ] }, { "name": "F14O23_12", "type": "synonym", "evidence": [ { "id": "Q9M9H2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ] } ], "protein_names": [ { "name": "Nucleolar protein", "type": "synonym", "evidence": [ { "id": "Q9M9H2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9H2", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2", "locus": {} } ], "crossref": [ { "id": "843504", "url": "https://www.ncbi.nlm.nih.gov/gene/843504", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G71740", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G71740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SRDYEPV", "url": "https://omabrowser.org/oma/group/SRDYEPV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M9H2", "url": "https://www.orthodb.org/?gene=Q9M9H2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33237", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33237", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33237:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33237:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT1G71740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G71740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M9H2", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9H2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRKLRRWAACYGSRDYEPVIYLQNDMTMMNNGGVYEYNGDPSMLLSGDQRRGPLWQKNILMGGKCQLPDFSGVILYDADGQVVPPAKNSLPLLTWK", "length": 130, "header": "tr|Q9M9H2-1|Q9M9H2_ARATH Isoform 1 of Nucleolar protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9H2-1" }, "isoforms": [ { "isoform_ac": "Q9M9H2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2/entry#Q9M9H2-1", "sequence": { "sequence": "MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRKLRRWAACYGSRDYEPVIYLQNDMTMMNNGGVYEYNGDPSMLLSGDQRRGPLWQKNILMGGKCQLPDFSGVILYDADGQVVPPAKNSLPLLTWK", "length": 130, "header": "tr|Q9M9H2-1|Q9M9H2_ARATH Isoform 1 of Nucleolar protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9H2-1" }, "locus": { "chromosome": "1", "start_pos": 26987245, "end_pos": 26987637, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G71740.1", "url": "https://www.ensemblgenomes.org/id/AT1G71740.1" }, { "database": "Ensembl Peptide", "id": "AT1G71740.1", "url": "https://www.ensemblgenomes.org/id/AT1G71740.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9H2", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9H2", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G71740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G71740", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M9H2", "url": "https://www.uniprot.org/uniprotkb/Q9M9H2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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} ], "sequence": { "sequence": "MSGKRVIAICMSGGEFQTEKGGSLSYKGGDAHAIDVDEQMKFIDFISEIGEMFNCDVRTVSLKYFLPDNKKTLISISNDKDLKRMIKFHENSNTADVYLLPEEATPDISNMPASRSSRTTLSEAIPPVPMDDMIDDTMGPEELPISISVSAPPAVTMEEVMNRAEDAQIIINPSELMSSIVEVPNPKGDILTKARTQQWQNTITGVGQRFKNVGEFREALRKYAIANQFGFRYKKNDSHRVTVKCKAEGCPWRIHASRLSTTQLICIKKMNPTHTCEGAGGINGLQTSRSWVASIIKEKLKVFPNYKPKDIVSDIKEEYGIQLNYFQAWRGKEIAREQLQGSYKDGYKQLPLFCEKIMETNPGSLATFTTKEDSSFHRVFVSFHASVHGFLEACRPLVFLDSMQLKSKYQGTLLAATSVDGDDEVFPLAFAVVDAETDDNWEWFLLQLRSLLSTPCYITFVADRQKNLQESIPKVFEKSFHAYCLRYLTDELIKDLKGPFSHEIKRLIVDDFYSAAYAPRADSFERHVENIKGLSPEAYDWIVQKSQPDHWANAYFRGARYNHMTSHSGEPFFSWASDANDLPITQMVDVIRGKIMGLIHVRRISANEANGNLTPSMEVKLEKESLRAQTVHVAPSADNNLFQVRGETYELVNMAECDCSCKGWQLTGLPCHHAVAVINYYGRNPYDYCSKYFTVAYYRSTYAQSINPVPLLEGEMCRESSGGSAVTVTPPPTRRPPGRPPKKKTPAEEVMKRQLQCSRCKGLGHNKSTCKDYLLEC", "length": 777, "header": "tr|Q9M9L2-1|Q9M9L2_ARATH Isoform 1 of MuDR family transposase OS=Arabidopsis thaliana OX=3702 GN=MUG7 PE=1 SV=1 CANONICAL=Q9M9L2-1" }, "isoforms": [ { 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OS=Arabidopsis thaliana OX=3702 GN=MUG7 PE=1 SV=1 CANONICAL=Q9M9L2-1" }, "locus": { "chromosome": "3", "start_pos": 1743413, "end_pos": 1746785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05850.1", "url": "https://www.ensemblgenomes.org/id/AT3G05850.1" }, { "database": "Ensembl Peptide", "id": "AT3G05850.1", "url": "https://www.ensemblgenomes.org/id/AT3G05850.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 105, "start_aa": "Thr", "end_pos": 105, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr105", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 729, "start_aa": "Thr", "end_pos": 729, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr729", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M9L2", "url": "https://www.uniprot.org/uniprotkb/Q9M9L2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9L2", "url": "https://www.uniprot.org/uniprotkb/Q9M9L2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G05850", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05850", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M9L2", "url": "https://www.uniprot.org/uniprotkb/Q9M9L2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M9L2", "url": "https://www.uniprot.org/uniprotkb/Q9M9L2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" }, { "start_pos": 612, "end_pos": 614, "annotation": "n_glycosylation_sequon" }, { "start_pos": 766, "end_pos": 768, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M9L2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9L2" }, { "id": "PS50966", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50966" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SWIM-type", "eco_id": "ECO_0000259", "start_pos": 649, "end_pos": 682, "start_aa": "Tyr", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 105, 729 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 236, "end_pos": 238 }, { "start_pos": 612, "end_pos": 614 }, { "start_pos": 766, "end_pos": 768 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M9L9-1", "uniprot_ac": "Q9M9L9", "uniprot_id": "Q9M9L9_ARATH", "mass": { "chemical_mass": 46934.0, "monoisotopic_mass": 46934.0 }, "refseq": {}, "gene_names": [ { "name": "F10A16.6", "type": "synonym", "evidence": [ { "id": "Q9M9L9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9" } ] }, { "name": "F10A16_6", "type": "synonym", "evidence": [ { "id": "Q9M9L9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9" } ] } ], "protein_names": [ { "name": "TRF2/HOY1 PH-like domain-containing protein", "type": "recommended", "evidence": [ { "id": "Q9M9L9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9L9", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9", "locus": {} } ], "crossref": [ { "id": "AT3G05770", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G05770", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819746", "url": "https://www.ncbi.nlm.nih.gov/gene/819746", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR057939", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057939", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G05770", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05770", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MATEFCP", "url": "https://omabrowser.org/oma/group/MATEFCP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33494", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33494", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33494:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33494:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF24818", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24818", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G05770", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G05770", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LME4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LME4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LME4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LME4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9L9", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9L9-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSMKRSREESQGGGNHNRFVDEGPRLNLPLTKTPELINKIESYLKVHYTCPHQQTENSSKTSTLPKSPEKLKAMNFPISTIKIGDCVFVAKNPDDIVAKFYFAKKKLLWEFLFGEPVANMPRLKSKIEIQWNDVSSFEESINSRDETGILKIELKKRPTFFTETNPQAGKHTQWKQLDYDFTGDQASYYRRHTLHFPPGVLQKNLEKLLTDSFWSKLYKVPFPVHESLYFDIGFENNNSSNGHSKTVGFNVNNGLQHDFSQVRDLKERKKIITLIGIGGVGEGEGNFSMANGGWQRNSYSHVNSLNYNTDNGLLGMQAIPPSSQVANEHYNNTQNDYTGSQFGYRMNQDEIQKMQRIGKILESQAYAVPDTQTKLTSSGMNNGPMYPPAGSYLESRLLEEWYEHTRRFQQ", "length": 410, "header": "tr|Q9M9L9-1|Q9M9L9_ARATH Isoform 1 of TRF2/HOY1 PH-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9L9-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LME4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9L9/entry#A0A1I9LME4-1", "sequence": { "sequence": "MSMKRSREESQGGGNHNRFVDEGPRLNLPLTKTPELINKIESYLKVHYTCPHQQTENSSKTSTLPKSPEKLKAMNFPISTIKIGDCVFVAKNPDDIVAKFYFAKKKLLWEFLFGEPVANMPRLKSKIEIQWNDVSSFEESINSRDETGILKIELKKRPTFFTETNPQAGKHTQWKQLDYDFTGDQASYYRRHTLHFPPGVLQKNLEKLLTDSFWSKLYKVPFPVHESLYFDIGFENNNSSNGHSKTVGFNVNNGLQHDFSQGIGGVGEGEGNFSMANGGWQRNSYSHVNSLNYNTDNGLLGMQAIPPSSQVANEHYNNTQNDYTGSQFGYRMNQDEIQKMQRIGKILESQAYAVPDTQTKLTSSGMNNGPMYPPAGSYLESRLLEEWYEHTRRFQQ", "length": 396, "header": "tr|A0A1I9LME4-1|A0A1I9LME4_ARATH Computationally mapped isoform of TRF2/HOY1 PH-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9L9-1" }, "locus": { "chromosome": "3", "start_pos": 1710328, "end_pos": 1712225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05770.2", "url": "https://www.ensemblgenomes.org/id/AT3G05770.2" }, { "database": "Ensembl Peptide", "id": "AT3G05770.2", "url": "https://www.ensemblgenomes.org/id/AT3G05770.2" } ] } }, { "isoform_ac": "Q9M9L9-1", "url": 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} ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, 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"MGKARTVGVGMDYSPTSKLALRWAAENLLEDGDTVILIHVQPQNADHTRKILFEETGSPLIPLEEFREVNLSKQYGLAYDPEVLDVLDTLSRAKKVKVVAKVYWGDPREKLCDAVENLKLDSIVLGSRGLGSLKRILLGSVSNHVVTNATCPVTVVKAN", "length": 159, "header": "tr|Q9M9P5-1|Q9M9P5_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN=HRU1 PE=1 SV=1 CANONICAL=Q9M9P5-1" }, "isoforms": [ { "isoform_ac": "Q9M9P5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9P5/entry#Q9M9P5-1", "sequence": { "sequence": "MGKARTVGVGMDYSPTSKLALRWAAENLLEDGDTVILIHVQPQNADHTRKILFEETGSPLIPLEEFREVNLSKQYGLAYDPEVLDVLDTLSRAKKVKVVAKVYWGDPREKLCDAVENLKLDSIVLGSRGLGSLKRILLGSVSNHVVTNATCPVTVVKAN", "length": 159, "header": "tr|Q9M9P5-1|Q9M9P5_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN=HRU1 PE=1 SV=1 CANONICAL=Q9M9P5-1" }, "locus": { "chromosome": "3", "start_pos": 761004, "end_pos": 763369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03270.2", "url": "https://www.ensemblgenomes.org/id/AT3G03270.2" }, { "database": "Ensembl Peptide", "id": "AT3G03270.2", "url": "https://www.ensemblgenomes.org/id/AT3G03270.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 58, "end_pos": 58, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9P5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9P5" } ], "site_lbl": "Ser58" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31343:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05623", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05623", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_172956", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172956", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G15030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G15030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A178WKC3", "url": "https://www.uniprot.org/uniprotkb/A0A178WKC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A178WKC3-1", "url": "https://www.uniprot.org/uniprotkb/A0A178WKC3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9Q2", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9Q2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLGAGFNFTQLQRAQIDVSYGCRSSHTKDRENGSALLKHHVSEASSSNVERFLDSVTPSVPAHYLSKTIVRERGGSDVESQVPYFLLGDVWESFAEWSAYGIGVPLTLNNNKDRVFQYYVPSLSGIQVYADVDALTSSLQARRQGEESESDFRDSSSEGSSSESERGLCYSKEQISARMDKLSLRKEHQEDSSSDDGEPLSSQGRLIFEYLERDLPYVREPFADKMSDLASRFPELKTLRSCDLLPSSWFSVAWYPIYKIPTGPTLKDLDACFLTYHSLHTPFQGPGVTTGSMHVVQPRESVEKMELPVFGLASYKLRGSVWTSFGGSGHQLANSLFQAADNWLRLRQVNHPDFIFFCRR", "length": 360, "header": "tr|Q9M9Q2-1|Q9M9Q2_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9Q2-1" }, "isoforms": [ { "isoform_ac": "A0A178WKC3-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q2/entry#A0A178WKC3-1", "sequence": { "sequence": 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Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9Q2", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9Q2", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G15030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, 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"https://www.ncbi.nlm.nih.gov/gene/6240794", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G15015", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15015", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9M9Q4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9M9Q4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001117291", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117291", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G15015", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G15015", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M9Q4", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9Q4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDVTLPHHVVEDILERLPVKTLRKFKCVCSTWRSTIDSQRFKDRHMIHGQLLEDPDILLLGRWDPPSLSKNASLMTLTFDSSTMPFSFKIQTIPGKANFYKVTQSHSKSLKVVTVYDSNMEATGLVLYDMTQSERTFANFCLSFKNRETPTAYFPSLITI", "length": 160, "header": "sp|Q9M9Q4-1|FB9_ARATH Isoform 1 of F-box protein At1g15015 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M9Q4-1" }, "isoforms": [ { "isoform_ac": "Q9M9Q4-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9Q4/entry#Q9M9Q4-1", "sequence": { "sequence": "MDVTLPHHVVEDILERLPVKTLRKFKCVCSTWRSTIDSQRFKDRHMIHGQLLEDPDILLLGRWDPPSLSKNASLMTLTFDSSTMPFSFKIQTIPGKANFYKVTQSHSKSLKVVTVYDSNMEATGLVLYDMTQSERTFANFCLSFKNRETPTAYFPSLITI", "length": 160, "header": "sp|Q9M9Q4-1|FB9_ARATH Isoform 1 of F-box protein At1g15015 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9M9Q4-1" }, "locus": { "chromosome": "1", "start_pos": 5172081, "end_pos": 5172923, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15015.1", "url": "https://www.ensemblgenomes.org/id/AT1G15015.1" }, { "database": "Ensembl Peptide", "id": "AT1G15015.1", "url": "https://www.ensemblgenomes.org/id/AT1G15015.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G14480", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G14480", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4HW68", "url": "https://www.uniprot.org/uniprotkb/F4HW68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HW68-1", "url": "https://www.uniprot.org/uniprotkb/F4HW68-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9R5", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9R5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLRLQQAAESGSINELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLSRVKGRNGVTPFHLLVIRGDDDLVAECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLTGWIQRMSQKDAYYIENRVLNKRDFDFNTALHLAAYKNDQQALKLLLKCRLVEPNLVNIDDLTFVDILRTQGENAGGGNLDLEQAVIKTGCVEAASMPKFKEESDLLKSPINFMTYYSTSMKRMKSSTSDQDRGAFLIVCTLIITATYQMALQPPGGVHQSENANANAGSVVMKQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFTIWFFYIGTCLCISYALAMAVISPHPLVFLSATFALFLVFALYLLLEAFVDTWRKHRTVVPKSRFSWFWKVLQYYYI", "length": 441, "header": "tr|Q9M9R5-1|Q9M9R5_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9R5-1" }, "isoforms": [ { "isoform_ac": "F4HW68-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5/entry#F4HW68-1", "sequence": { "sequence": "MDLRLQQAAESGSINELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLSRVKGRNGVTPFHLLVIRGDDDLVAECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQALKLLLKCRLVEPNLVNIDDLTFVDILRTQGENAGGGNLDLEQAVIKTGCVEAASMPKFKEESDLLKSPINFMTYYSTSMKRMKSSTSDQDRGAFLIVCTLIITATYQMALQPPGGVHQSENANANAGSVVMKQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFTIWFFYIGTCLCISYALAMAVISPHPLVFLSATFALFLVFALYLLLEAFVDTWRKHRTVVPKSRFSWFWKVLQYYYI", "length": 398, "header": "tr|F4HW68-1|F4HW68_ARATH Computationally mapped isoform of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9R5-1" }, "locus": { "chromosome": "1", "start_pos": 4956382, "end_pos": 4958076, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14480.2", "url": "https://www.ensemblgenomes.org/id/AT1G14480.2" }, { "database": "Ensembl Peptide", "id": "AT1G14480.2", "url": "https://www.ensemblgenomes.org/id/AT1G14480.2" } ] } }, { "isoform_ac": "Q9M9R5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5/entry#Q9M9R5-1", "sequence": { "sequence": "MDLRLQQAAESGSINELYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLSRVKGRNGVTPFHLLVIRGDDDLVAECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLTGWIQRMSQKDAYYIENRVLNKRDFDFNTALHLAAYKNDQQALKLLLKCRLVEPNLVNIDDLTFVDILRTQGENAGGGNLDLEQAVIKTGCVEAASMPKFKEESDLLKSPINFMTYYSTSMKRMKSSTSDQDRGAFLIVCTLIITATYQMALQPPGGVHQSENANANAGSVVMKQTFFILLWISNTVGFCCAVFYTFCLIPLGQLFTIWFFYIGTCLCISYALAMAVISPHPLVFLSATFALFLVFALYLLLEAFVDTWRKHRTVVPKSRFSWFWKVLQYYYI", "length": 441, "header": "tr|Q9M9R5-1|Q9M9R5_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9M9R5-1" }, "locus": { "chromosome": "1", "start_pos": 4956231, "end_pos": 4958038, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14480.1", "url": "https://www.ensemblgenomes.org/id/AT1G14480.1" }, { "database": "Ensembl Peptide", "id": "AT1G14480.1", "url": "https://www.ensemblgenomes.org/id/AT1G14480.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9R5", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9R5", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G14480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14480", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M9R5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9R5" }, { "id": "PF13962", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PGG", "eco_id": "ECO_0000259", "start_pos": 288, "end_pos": 384, "start_aa": "Asp", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M9S1-1", "uniprot_ac": "Q9M9S1", "uniprot_id": "Q9M9S1_ARATH", "mass": { "chemical_mass": 62765.0, "monoisotopic_mass": 62765.0 }, "refseq": {}, "gene_names": [ { "name": "F14L17.20", "type": "synonym", "evidence": [ { "id": "Q9M9S1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1" } ] }, { "name": "F14L17_20", "type": "synonym", "evidence": [ { "id": "Q9M9S1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1" } ] } ], "protein_names": [ { "name": "Glyoxal oxidase-related protein", "type": "synonym", "evidence": [ { "id": "Q9M9S1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9S1", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1", "locus": {} } ], "crossref": [ { "id": "1.1.3.9", "url": "https://www.brenda-enzymes.org/enzyme.php?ecno=1.1.3.9&UniProtAcc=Q9M9S1", "database": "BRENDA", "categories": [ "Enzyme and Pathway" ] }, { "id": "cd02851", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02851", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "838005", "url": "https://www.ncbi.nlm.nih.gov/gene/838005", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009880", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009880", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015202", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015202", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037293", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037293", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G14430", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14430", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WVDLPSF", "url": "https://omabrowser.org/oma/group/WVDLPSF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9M9S1", "url": "https://www.orthodb.org/?gene=Q9M9S1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR32208", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32208", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32208:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32208:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07250", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07250", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09118", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09118", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G14430", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G14430", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M9S1", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9S1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTQERFKNNLNAVVISFFFFFLCSTSDLLLPRSPLAILTGGRWDLLQPSVGISAMHMQLLHNNKVVIFDRTDYGPSNVSLPSQTCQNATVFDCSAHSILYDVASNTFRPLTLRYDTWCSSGSLNASGSLIQTGGYGNGERTVRVFTPCDGGVGSVSCDWIENRAYLSSRRWYSTNQILPDGRIIIVGGRRAFNYEFYPKDPGESVFNLRFLAETRDPNEENNLYPFLHLLPDGNLFIFANRRSILFDFVNHRIIKEFPQIPGGDKRNYPSTGSSVLLPLFLTGDINRTKITAEVMVCGGAPPGAFFKAARTIPKIFVAGSRTCGRLKVTDPDPKWVMEQMPSPRVMSDMLLLPNGDVLIINGAANGTAGWEDATNAVLNPILYLPEEPDQTRRFEILTPTRIPRMYHSASLLLSDGRVLVGGSNPHRNYNFTARPYPTELSLEAYLPRYLDPQYARVRPTIITVELAGNMLYGQAFAVTFAIPAFGMFDGGVSVRLVAPSFSTHSTAMNQRLLVLRVRRVSQLSVFAYKADVDGPTNSYVAPPGYYMMFVVHRGIPSVAVWVKI", "length": 564, "header": "tr|Q9M9S1-1|Q9M9S1_ARATH Isoform 1 of Glyoxal oxidase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9S1-1" }, "isoforms": [ { "isoform_ac": "Q9M9S1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9S1/entry#Q9M9S1-1", "sequence": { "sequence": 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Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T0", "url": "https://www.uniprot.org/uniprotkb/Q9M9T0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.", "journal": "Plant Biotechnol. 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044924", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044924", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G14310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KCVGIIS", "url": "https://omabrowser.org/oma/group/KCVGIIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46649", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46649", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46649:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46649:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00702", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00702", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_172883", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172883", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G14310", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G14310", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9M9T1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9T1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEACLRCSRGSYLIEAMRPLSSSLRPSSSVSFSTGKPIKRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDLNVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIACWLWGEDVQTFSDIQKRILVSEL", "length": 254, "header": "tr|Q9M9T1-1|Q9M9T1_ARATH Isoform 1 of Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9T1-1" }, "isoforms": [ { "isoform_ac": "Q9M9T1-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1/entry#Q9M9T1-1", "sequence": { "sequence": "MEACLRCSRGSYLIEAMRPLSSSLRPSSSVSFSTGKPIKRAYDGLLLDAGGTLLQLSKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGCSDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDLNVIDMFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIACWLWGEDVQTFSDIQKRILVSEL", "length": 254, "header": "tr|Q9M9T1-1|Q9M9T1_ARATH Isoform 1 of Haloacid dehalogenase-like hydrolase (HAD) superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9T1-1" }, "locus": { "chromosome": "1", "start_pos": 4884951, "end_pos": 4886793, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14310.1", "url": "https://www.ensemblgenomes.org/id/AT1G14310.1" }, { "database": "Ensembl Peptide", "id": "AT1G14310.1", "url": "https://www.ensemblgenomes.org/id/AT1G14310.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G14310", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14310", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287A5Y1-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 3", "gene_name": "HDHD3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHRLPLRLLTWDVKDTLLRLRHPVGVEYASKALAHGLQVEAAALGQAFPQVYKAQSHSFPNYGLSQGLTSRQWWLDVILQTFHQAGVGDAQVVIPIADQLYEDFSHPHTWQVLEGAKATLKGCQKRGLRLAVVSNFDRRLENILVGLGLRDYFDFVLTSEAAGWPKPDPRIFHEALRLAQVEPAATAHIGDSYRCDYKGARAVGMHSFLVAGPEPLDPAVKDSVPQEHILPSLSHLLPALDRLEGSPLGF", "length": 251 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "G3HI00-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 3", "gene_name": "Hdhd3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAHRLQMRLLTWDMKDTLIKLCRPVGEEYASKARAHGLVVEATALEQAFGQAYRVHSHNFPNYGQSCGLTSRQWWVDLILNTFHLAGVPDAQAIIPIADQLYNDYSSPSTWQVLEGAETTLKGCRKRGLRLAVISNFDRRLEDILVGLGLREHFDFVLTSEAAGCPKPDPRIFHKALQLACVEPAVAAHVGDSYPCDYQGARAVGMHSFLVVGSEPLDSSVRDSVPKEHILPSLSHLLPALDLLEASSPVS", "length": 251 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5E9D6-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 3", "gene_name": "HDHD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAHRLQLRLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEGAEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGARAVGMHSFLVAGPEPLDPAVKDSVPQEHFLPSLSHLLPALDYLEGSSARL", "length": 251 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9BSH5-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 3", "gene_name": "HDHD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAHRLQIRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGSTPGL", "length": 251 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CYW4-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 3", "gene_name": "Hdhd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAHRLQMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQAVGMHSFLVAGSEPLDSAVRDSVPKEHILPSLSHLLPALDLLEASSPMS", "length": 251 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9W4J7-1", "protein_name": "Uncharacterized protein", "gene_name": "24639695", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSLTSQFVANLKRFRLVTFDVTDTLLRLEDPLRQYHQTAEEFGVTGVDRRRLEQCFRQQFKAMSSEHPNFGRYSPGLDWQRWWLQLVARTFSCVDHGLAPEKLEKIGQRLISVFRTSACWSHVNGAQELVQNVRNAGKCVGIISNFDSSLPQVLDAMGFAGKFDFILTSYEAGVMKPERGIFEIPLQRLQIPAEQALHIGNKLDMDYEGARNCGWSGLLVSNADNPHSFASLSSLLEALKTQPIRW", "length": 246 }, "evidence": [ { "id": "Q9M9T1", "url": "https://omabrowser.org/oma/group/Q9M9T1/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9M9T2-1", "uniprot_ac": "Q9M9T2", "uniprot_id": "Q9M9T2_ARATH", "mass": { "chemical_mass": 37686.0, "monoisotopic_mass": 37686.0 }, "refseq": {}, "gene_names": [ { "name": "F14L17.6", "type": "synonym", "evidence": [ { "id": "Q9M9T2", "database": 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Recognizes a non-native conformation in the central domain of eEF2 and recruits the chaperonin-containing T-complex (TRiC) to the C-terminal region of the nascent polypeptide, preventing unproductive interactions and promoting efficient folding of the N-terminal GTPase domain. May also assist in eEF2 maturation by recruiting the molecular chaperone Hsp90.", "evidence": [ { "database": "UniProtKB", "id": "F4HUI7", "url": "https://www.uniprot.org/uniprotkb/F4HUI7#function" }, { "database": "UniProtKB", "id": "ARBA00094387", "url": "https://www.uniprot.org/uniprotkb/ARBA00094387#function" }, { "database": "UniProtKB", "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2", "locus": {} } ], "crossref": [ { "id": "AT1G14300", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G14300", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "837991", "url": "https://www.ncbi.nlm.nih.gov/gene/837991", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007205", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007205", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039717", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039717", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G14300", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14300", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MCILLTN", "url": "https://omabrowser.org/oma/group/MCILLTN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4HUI7", "url": "https://www.orthodb.org/?gene=F4HUI7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M9T2", "url": "https://www.orthodb.org/?gene=Q9M9T2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13387", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13387", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13387:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13387:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04063", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04063", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04064", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04064", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G14300", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G14300", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4HUI7", "url": "https://www.uniprot.org/uniprotkb/F4HUI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HUI7-1", "url": "https://www.uniprot.org/uniprotkb/F4HUI7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9T2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVTELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKEVSEPAAQALVNLSQKCELAKKMIQMGLIKVAMDMLYKPESCITRLLVMLLVNLTQLDDGVSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLEPKRRLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKTYSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQLGYEYEEDPKAMRAYEQVGSLLVEEAGGPEESLEPTKAES", "length": 339, "header": "tr|Q9M9T2-1|Q9M9T2_ARATH Isoform 1 of Co-chaperone protein HGH1 homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9T2-1" }, "isoforms": [ { "isoform_ac": "F4HUI7-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2/entry#F4HUI7-1", "sequence": { "sequence": "MVTELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKEVSEPAAQALVNLSQKCELAKKMIQMGLIKVAMDMLYKPESCITRLLVMLLVNLTQLDDGVSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLEPKRRLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKTYSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEVKHFSVSLSLLVNSCEGPIKPKTYKRSSVMSKLLLMLQEAGRRAFWSVNGPRILQLGYEYEEDPKAMRAYEQVGSLLVEEAGGPEESLEPTKAES", "length": 377, "header": "tr|F4HUI7-1|F4HUI7_ARATH Computationally mapped isoform of Co-chaperone protein HGH1 homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9T2-1" }, "locus": { "chromosome": "1", "start_pos": 4882376, "end_pos": 4884791, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14300.2", "url": "https://www.ensemblgenomes.org/id/AT1G14300.2" }, { "database": "Ensembl Peptide", "id": "AT1G14300.2", "url": "https://www.ensemblgenomes.org/id/AT1G14300.2" } ] } }, { "isoform_ac": "Q9M9T2-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2/entry#Q9M9T2-1", "sequence": { "sequence": "MVTELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKEVSEPAAQALVNLSQKCELAKKMIQMGLIKVAMDMLYKPESCITRLLVMLLVNLTQLDDGVSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLEPKRRLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKTYSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQLGYEYEEDPKAMRAYEQVGSLLVEEAGGPEESLEPTKAES", "length": 339, "header": "tr|Q9M9T2-1|Q9M9T2_ARATH Isoform 1 of Co-chaperone protein HGH1 homolog OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9T2-1" }, "locus": { "chromosome": "1", "start_pos": 4882336, "end_pos": 4884818, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14300.1", "url": "https://www.ensemblgenomes.org/id/AT1G14300.1" }, { "database": "Ensembl Peptide", "id": "AT1G14300.1", "url": "https://www.ensemblgenomes.org/id/AT1G14300.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G14300", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14300", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287AMW7-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "HGH1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGGATATSPRGAAAPNELIRMGDTEAEAGPLAGRLASVGSAMPEAHPTAEAAKLLPFLALEARADLQAAAVQHALALTGSEPGRTLLAGQAALLRALIELAVAPAPAPAREATRVLINLAADPGLHKPLLAAEPELLACLLGCTLDPQWPWAEEAAAVLANLSREPAPCAALMEALAASGPGESGLERLVRALCTPGYNARAPLHYLGPVLSNLSQRPATRAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMDRLPVDLQYLPPDKQREPDADIRKMLIEAIMLLTATAPGRKQVRDQGAYLILRELHSWEPEPDVQVACEKLIQVLIGDEPEHGLENLLEVQVPEDVERQLQQQDRQEQEQCKREHQELELAPEPQAEGAAPT", "length": 426 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P48362-1", "protein_name": "Co-chaperone protein HGH1", "gene_name": "HGH1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTSQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPTSKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKLVRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNLAKDDGILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKGYDKKLTKYASFNYLAFFFADISRFKLGRMYFIEEQEYDGVVPISKLLVFTEKYDAKVRREGVASTIKNSLFDSETHERLLKDEKINLLPYILLPIASAKDSEIDEEDMFNLPDELQLLPEDKERDPIPAIICCHLESILLLCTTHAGREYLRDKSVYPLVRELHKNVENEDIGELCYRIVNMLMRGEPGAGAVEEMPSKNAEEEEEEESEEEEDDDEEDEIVEVA", "length": 394 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q6AY79-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "Hgh1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRGPGVGSGLSGERGLSGKEAGADTEVAELLPFLVPGARADLQAAAAQHVLALTGVGSGRTLLAGQTALLRALIDLAVAPIPAPSRDASRALVNLAADPDLHWQMLAADPELPVRLLRCVLDPQWPWAEELAAVLANLSREPAPCAVLTEKLVAAEPERLGLERLVSALCMPSYNASAPLHYLGPLLSNLSQQAEVRAFLLDPDRCVVQRLLPLTQYTDSSVRRGGVVGTLRNCCFEHRHHKWLLGPQVDILPFLLLPLAGPEEFSEEEMEELPVDLQYLSPDKQREPDADIRKMLIEAIMLLTATAPGRKQVRDQGAYLILRELYAWESEPDVRMACEKLIQVLIGDEPEVGMENLLEVQVPEDVERQLQELDQQEQQELAQERRDKGAPRT", "length": 393 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q76NW7-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDQLPELVPFLLEPKSEIKLLALQHLLGVSDNQEARDILKSTQIINNCIKLITDSNHVVVRHALTILINLCQDTDMLNDIVKKNIVPRLVDGTTDTKNKMSEIFAMLLSNVTHTKEGCLSLMQCGKELEAFFIMKLVQVLTMDSNQEDYFKSTKNNWIVNIILNVTQIQEGRKIVLDKENQIFKEILPLVRHENVIKRRGILGIIRNCCYSEQHHDYLISPEVDILTKLCLPIRGNDKLDDDDLVGLHIDLHNSSLPIGNERDQDRECRKMVVESLIFLTGTKKGRVSMRTAKIYPILRNLFNFETEEELRDNVEKVVELIIRDEEGDPTPEEIEQMNKKQKLEDEDAQFETDEI", "length": 355 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8C3I8-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "Hgh1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRGPGVGSGFSGERGLLEQEAGADTEAVELLPFLVLGARADLQAAAAQHVLALTGAGSGRTLLAGQPELLRALVDLAVAPAPAPSRDASRALVNLAADPNVHWQLLAADPELPARLLRCVLDPQWPWAEEAAAVLANLSREPAPCAALMEKLMAAEPERLGLERLVNALCTPSYNAAAPLHYLGPLLSNLSQQAEVRAFLLDPDRCVVQRLLPLTQYTDSSVRRGGVVGTLRNCCFEHRHHKWLLGAQVDILPFLLLPLAGPEEFSEEEMDQLPVDLQYLSPDKQREPDADIRKMLIEAVMLLTATAPGRKQVRDQGAYLILRELHSWEPEPDVRMACEKLIQVLIGDEPEAGMENLLEVQVPEDVEQQLQELDQQEQQELAQELRGNGAPHT", "length": 393 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BTY7-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "HGH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQLDCREQEQLERELAPEPWVERATPT", "length": 390 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VBG6-1", "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METVKELVQFMQPNQRLDLKAVALTHVLGLTGSSEGKSAILSLDEMLMAIFGLTFDANQTVAKDAVLSLINLTSEEEAAIKVFQLAKQLQPPFAIVEVAAKEITNEQSDLADPWSMVLSNLTRVESLVHEILDTLERDDHTLPRLAKAFAQLDYNKKKAKLHYLAPIFCNLTQVSRGRELCCHRKYELLEKLLPFASFEGSVVRRGGTIGILKNVCFDTVYHDVILNEQSSILVAILQPLCGPEEFSDEDNELLPIELQYLPESKTREEDPDLRKMLLECLLQLCSTRRSREILRSRGVYEILREYHKWEAKVGKDSDCLLACENVVDILIKKEEEIGLDNYKTEVEVPAEQSEKFVQEDAAYVKSLLD", "length": 369 }, "evidence": [ { "id": "Q9M9T2", "url": "https://omabrowser.org/oma/group/Q9M9T2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M9T2", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 112, "end_pos": 114, "annotation": "n_glycosylation_sequon" }, { "start_pos": 164, "end_pos": 166, "annotation": "n_glycosylation_sequon" }, { "start_pos": 56, "end_pos": 58, "annotation": "n_glycosylation_sequon" }, { "start_pos": 71, "end_pos": 73, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M9T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" }, { "id": "PF04064", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04064" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein HGH1 C-terminal", "eco_id": "ECO_0000259", "start_pos": 275, "end_pos": 324, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9M9T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9T2" }, { "id": "PF04063", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04063" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein HGH1 N-terminal", "eco_id": "ECO_0000259", "start_pos": 95, "end_pos": 270, "start_aa": "Leu", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 112, "end_pos": 114 }, { "start_pos": 164, "end_pos": 166 }, { "start_pos": 56, "end_pos": 58 }, { "start_pos": 71, "end_pos": 73 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9M9V4", "url": "https://www.uniprot.org/uniprotkb/Q9M9V4" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants.", "journal": "Mol. 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"evidence": [ { "id": "Q9M9W5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5/entry#names_and_taxonomy" } ] }, { "name": "3.3.2.10", "type": "synonym", "evidence": [ { "id": "Q9M9W5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5/entry#names_and_taxonomy" } ] }, { "name": "alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_187211", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187211" } ] } ], "function": [ { "annotation": "Epoxide hydrolase involved in the biosynthesis of cucurbitacin and mogroside tetracyclic triterpene natural products (e.g. siamenoside I and mogrosides IV, V and VI). Cucurbitacins have cytotoxic properties and exhibit deterrent taste as a defense barrier against herbivores. Mogrosides are nonsugar highly oxygenated compounds used as high-intensity zero-calorie sweeteners; they also possess pharmacological properties such as regulating immunity, lowering blood sugar and lipid levels, protecting the liver, and acting as antioxidants and antitumor agents. Catalyzes the hydrolysis of aromatic epoxide-containing substrates, such as the conversion of 24,25-epoxycucurbitadienol to 24,25-dihydroxycucurbitadienol.", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ19", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ19#function" }, { "database": "UniProtKB", "id": "ARBA00058358", "url": "https://www.uniprot.org/uniprotkb/ARBA00058358#function" }, { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATEH1", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5", "locus": {} } ], "crossref": [ { "id": "AT3G05600", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G05600", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819726", "url": "https://www.ncbi.nlm.nih.gov/gene/819726", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000639", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000639", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G05600", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05600", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NWYRVRT", "url": "https://omabrowser.org/oma/group/NWYRVRT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43329", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43329", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187211", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187211", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19037", "url": "https://www.rhea-db.org/rhea/19037", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "81855", "url": "https://www.rhea-db.org/rhea/81855", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "AT3G05600", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G05600", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQ19", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ19-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ19-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M9W5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGIDHRMVSVNGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDLRGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEKINGFVCLSVPYRSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRIFLRNLFTGRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLNYYRAMDLNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEIVVIEDAGHFVNQEKPQEVTAHINDFFTKLRDNNKSF", "length": 331, "header": "tr|Q9M9W5-1|Q9M9W5_ARATH Isoform 1 of soluble epoxide hydrolase OS=Arabidopsis thaliana OX=3702 GN=ATEH1 PE=1 SV=1 CANONICAL=Q9M9W5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQ19-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5/entry#A0A1I9LQ19-1", "sequence": { "sequence": "MEGIDHRMVSVNGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDLRGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEKINGFVCLSVPYRSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRIFLRNLFTGRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLNYYRAMDL", "length": 243, "header": "tr|A0A1I9LQ19-1|A0A1I9LQ19_ARATH Computationally mapped isoform of soluble epoxide hydrolase OS=Arabidopsis thaliana OX=3702 GN=ATEH1 PE=1 SV=1 CANONICAL=Q9M9W5-1" }, "locus": { "chromosome": "3", "start_pos": 1623244, "end_pos": 1624819, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05600.2", "url": "https://www.ensemblgenomes.org/id/AT3G05600.2" }, { "database": "Ensembl Peptide", "id": "AT3G05600.2", "url": "https://www.ensemblgenomes.org/id/AT3G05600.2" } ] } }, { "isoform_ac": "Q9M9W5-1", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5/entry#Q9M9W5-1", "sequence": { "sequence": "MEGIDHRMVSVNGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDLRGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEKINGFVCLSVPYRSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRIFLRNLFTGRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLNYYRAMDLNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEIVVIEDAGHFVNQEKPQEVTAHINDFFTKLRDNNKSF", "length": 331, "header": "tr|Q9M9W5-1|Q9M9W5_ARATH Isoform 1 of soluble epoxide hydrolase OS=Arabidopsis thaliana OX=3702 GN=ATEH1 PE=1 SV=1 CANONICAL=Q9M9W5-1" }, "locus": { "chromosome": "3", "start_pos": 1623244, "end_pos": 1624852, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05600.1", "url": "https://www.ensemblgenomes.org/id/AT3G05600.1" }, { "database": "Ensembl Peptide", "id": "AT3G05600.1", "url": "https://www.ensemblgenomes.org/id/AT3G05600.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 222, "end_pos": 222, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9W5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9W5" } ], "site_lbl": "Tyr222" }, { "start_pos": 224, "end_pos": 224, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9W5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9W5" } ], "site_lbl": "Ser224" } ], "glycation": [], "keywords": [ "enzyme" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G05600", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05600", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "epoxide hydrolase activity", "id": "GO:0004301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004301", "evidence": [ { "database": "UniProtKB", "id": "Q9M9W5", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cutin biosynthetic process", "id": "GO:0010143", "url": 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"O48789-1", "O81299-1", "Q9SD45-1" ], "evidence": [ { "id": "81855", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/81855" } ] } ], "reaction_participants": [], "reaction_enzymes": [ { "uniprot_ac": "F4JKY6", "gene_name": "DL4016C", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "F4JKY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JKY6" } ] }, { "ec_number": "3.3.2.10", "activity": "", "evidence": [ { "id": "F4JKY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JKY6" } ] } ] }, { "uniprot_ac": "O48789", "gene_name": "", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "O48789", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48789" } ] }, { "ec_number": "3.3.2.10", "activity": "", "evidence": [ { "id": "O48789", "database": "UniProtKB", "url": 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"https://www.ebi.ac.uk/interpro/entry/IPR011011", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017907", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017907", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058746", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058746", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G05670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NQVCGIC", "url": "https://omabrowser.org/oma/group/NQVCGIC/", "database": "OMA", "categories": [ "Protein 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"MGKRNTSWARNSNRKVRSKDKGSDESDEDYVISDEDEEESEADLKEEYASSVDGEPSFDGFNGSDAVEDEELDEVEEEDVMLRNVEWPKVKTGPRGNRKITGCKSRKTNQVVVSDNEDVDLDDADDEDDEIRNSRNAVGKSGSLDGEKHQRIGLGKRRRVFYEIEDEDGDYPEEDGDEEEERDVENVDSNSLHDGEDGKMALEEQDNVSHETEKEDDGDYEDEDEDDDGDEDFTADEDVSLDEEEEEEIIACNKNALKVCKGNKRKRRSGEGRKRRKKCSVAKTRLTRGRKRRVRNTKKGVDEDDDDFVDDCLPARKKAKTKSSRPRPRRRCTVPSDSDVASSGESDYEYTISEEEREQIREAGSLLKSSVNHASSIRQTTVNKDLPQLRKSPVKKGEKKVELVKRDVIKNVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFRTISKPARSTPGVDLREVVIPVPERDQVYQPTEEELRSYLDPYENIICTECHQGDDDGLMLLCDLCDSSAHTYCVGLGREVPEGNWYCEGCRPVALGSASSQTHIISEQQRGSGFYSRPSPLVVSGQYQDVSLIVSPRTPFFNGENLFSPRIPNGDAQGSSPSGLGATTLSRRRTLHRHIQNIINGDRLINMGARTGGTSSDGFVTTQIGHGRTIDPSQPVASQETGISLYAISEERLPNNNSLISAHDPELLSPKLDEFGSEEAFRRLSNNTFLGERPIDLGFHHGLAQGDPLVSNQQRLHSHMPNTMSSMAGERLQERVKAHLKNLSSQNDLGQTTFDEISTCSIHTILAACGLEHESSEVHLVPPPVTCTHHHMTPGSSSSSSSGSSLMKGCCYSCFDSFVEDVVKMILDTRQPHWLSLGLH", "length": 883, "header": "tr|Q9M9X2-1|Q9M9X2_ARATH Isoform 1 of RING/U-box protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M9X2-1" }, "locus": { "chromosome": "3", "start_pos": 1653405, "end_pos": 1657159, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05670.2", "url": "https://www.ensemblgenomes.org/id/AT3G05670.2" }, { "database": "Ensembl Peptide", "id": "AT3G05670.2", "url": "https://www.ensemblgenomes.org/id/AT3G05670.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 468, "start_aa": "Thr", "end_pos": 468, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr468", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 597, "end_pos": 597, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9X2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9X2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Thr597" }, { "start_pos": 607, "end_pos": 607, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9X2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9X2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser607" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M9X2", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9M9X2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9X2" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M9X2", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G05670", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05670", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9M9X2", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9M9X2", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" }, { "start_pos": 699, "end_pos": 701, "annotation": "n_glycosylation_sequon" }, { "start_pos": 729, "end_pos": 731, "annotation": "n_glycosylation_sequon" }, { "start_pos": 785, "end_pos": 787, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9M9X2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" }, { "id": "PS50016", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PHD-type", "eco_id": "ECO_0000259", "start_pos": 503, "end_pos": 552, "start_aa": "Asn", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9M9X2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9X2" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", 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"species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MA32", "locus": {} } ], "crossref": [ { "id": "Q9MA32", "url": "https://alphafold.ebi.ac.uk/entry/Q9MA32", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G05930", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G05930", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd10017", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10017", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "837103", "url": "https://www.ncbi.nlm.nih.gov/gene/837103", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005508", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G05930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NFENPNG", "url": "https://omabrowser.org/oma/group/NFENPNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31541", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31541", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31541:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31541:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03754", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03754", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9MA32", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9MA32", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_172084", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172084", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G05930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G05930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MA32-1", "url": "https://www.uniprot.org/uniprotkb/Q9MA32-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTNDDDHAAERNTMSMNYELAATLSDEEQRARKGKAKIVCKEEDHVFIKKKEKYEEESEKREFFSHVPRKIRPALRYPQPNFENPNGASSSLNLPFEEDYYMAEYYKKTETINPPNPYHQWSPSSFLTEYTHPRMLEVLHRCGFNRPVVTCYSRTAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEERSILEEDTYNDETMGVGAILVDQRSQKWSVILKRWGQNYFLSCGWNDVVKANKLKAGDDICLWAFRCDGVLCFAMRQWRGILCFALVPPLTLRQSSSSNARRLC", "length": 318, "header": "sp|Q9MA32-1|Y1593_ARATH Isoform 1 of B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9MA32-1" }, "isoforms": [ { "isoform_ac": "Q9MA32-1", "url": "https://www.uniprot.org/uniprotkb/Q9MA32/entry#Q9MA32-1", "sequence": { "sequence": "MTTNDDDHAAERNTMSMNYELAATLSDEEQRARKGKAKIVCKEEDHVFIKKKEKYEEESEKREFFSHVPRKIRPALRYPQPNFENPNGASSSLNLPFEEDYYMAEYYKKTETINPPNPYHQWSPSSFLTEYTHPRMLEVLHRCGFNRPVVTCYSRTAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEERSILEEDTYNDETMGVGAILVDQRSQKWSVILKRWGQNYFLSCGWNDVVKANKLKAGDDICLWAFRCDGVLCFAMRQWRGILCFALVPPLTLRQSSSSNARRLC", "length": 318, "header": "sp|Q9MA32-1|Y1593_ARATH Isoform 1 of B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9MA32-1" }, "locus": { "chromosome": "1", "start_pos": 1799418, "end_pos": 1800933, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G05930.1", "url": "https://www.ensemblgenomes.org/id/AT1G05930.1" }, { "database": "Ensembl Peptide", "id": "AT1G05930.1", "url": "https://www.ensemblgenomes.org/id/AT1G05930.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "The plant B3 superfamily.", "journal": "Trends Plant Sci.", "date": "2008", "authors": "Swaminathan Kankshita, Peterson Kevin, Jack Thomas", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "reference": [ { "type": "PubMed", "id": "18986826", "url": "https://glygen.org/publication/PubMed/18986826" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G05930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9MA32", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9MA32-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 318, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9MA32-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9MA32" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MA32", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA32" }, { "id": "PRU00326", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00326" } ], "ann_type": "Nucleotide_Binding_Annotation", "uniprotkb_annotation": "TF-B3", "eco_id": "ECO_0000255", "start_pos": 201, "end_pos": 293, "start_aa": "Phe", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MA36-1", "uniprot_ac": "Q9MA36", "uniprot_id": "Q9MA36_ARATH", "mass": { "chemical_mass": 51016.0, "monoisotopic_mass": 51016.0 }, "refseq": { "ac": "NP_001030977", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030977" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9MA36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA36/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001030977", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030977" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MA36", "url": "https://www.uniprot.org/uniprotkb/Q9MA36" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MA36", "locus": {} } ], "crossref": [ { "id": "3766662", "url": "https://www.ncbi.nlm.nih.gov/gene/3766662", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G05894", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05894", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MAFTDVR", "url": "https://omabrowser.org/oma/group/MAFTDVR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9MA36", "url": "https://www.orthodb.org/?gene=Q9MA36", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR36707", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36707", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36707:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36707:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001030977", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030977", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G05894", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G05894", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MA36", "url": "https://www.uniprot.org/uniprotkb/Q9MA36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MA36-1", "url": "https://www.uniprot.org/uniprotkb/Q9MA36-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G05770", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05770", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NQREDYC", "url": "https://omabrowser.org/oma/group/NQREDYC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47293:SF80", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47293:SF80", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01419", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01419", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9MA49", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9MA49", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_172068", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172068", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G05770", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G05770", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MA49", "url": "https://www.uniprot.org/uniprotkb/Q9MA49", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MA49-1", "url": "https://www.uniprot.org/uniprotkb/Q9MA49-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGKIKIGPVGTDYSGKKTMVDWDEGSHNGIISQIFLSHGPTGVFSIQFQFMLDDTFFLSSCHGQNTGSMFDVILLNCPHEYITGISGEYLKSDGASGPQIRSLAFATNLNQYGPFGGSSSQSSIWNHEQQFRFKLGKFRQFSGFYGTYNASGLQNIGVYLQPTIVKPTGTRNAEETESNIVLG", "length": 184, "header": "sp|Q9MA49-1|JAL2_ARATH Isoform 1 of Jacalin-related lectin 2 OS=Arabidopsis thaliana OX=3702 GN=JAL2 PE=3 SV=1 CANONICAL=Q9MA49-1" }, "isoforms": [ { "isoform_ac": "Q9MA49-1", "url": "https://www.uniprot.org/uniprotkb/Q9MA49/entry#Q9MA49-1", "sequence": { "sequence": "MEGKIKIGPVGTDYSGKKTMVDWDEGSHNGIISQIFLSHGPTGVFSIQFQFMLDDTFFLSSCHGQNTGSMFDVILLNCPHEYITGISGEYLKSDGASGPQIRSLAFATNLNQYGPFGGSSSQSSIWNHEQQFRFKLGKFRQFSGFYGTYNASGLQNIGVYLQPTIVKPTGTRNAEETESNIVLG", "length": 184, "header": "sp|Q9MA49-1|JAL2_ARATH Isoform 1 of Jacalin-related lectin 2 OS=Arabidopsis thaliana OX=3702 GN=JAL2 PE=3 SV=1 CANONICAL=Q9MA49-1" }, "locus": { "chromosome": "1", "start_pos": 1725388, "end_pos": 1726321, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G05770.1", "url": "https://www.ensemblgenomes.org/id/AT1G05770.1" }, { "database": "Ensembl Peptide", "id": "AT1G05770.1", "url": "https://www.ensemblgenomes.org/id/AT1G05770.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": 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"Q9MA49", "url": "https://www.uniprot.org/uniprotkb/Q9MA49" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Antagonistic jacalin-related lectins regulate the size of ER body-type beta-glucosidase complexes in Arabidopsis thaliana.", "journal": "Plant Cell Physiol.", "date": "2008", "authors": "Nagano Atsushi J, Fukao Yoichiro, Fujiwara Masayuki, Nishimura Mikio, Hara-Nishimura Ikuko", "evidence": [ { "database": "UniProtKB", "id": "Q9MA49", "url": "https://www.uniprot.org/uniprotkb/Q9MA49" } ], "reference": [ { "type": "PubMed", "id": "18467340", "url": "https://glygen.org/publication/PubMed/18467340" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MA49", "url": "https://www.uniprot.org/uniprotkb/Q9MA49" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G05770", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05770", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9MA49", "url": "https://www.uniprot.org/uniprotkb/Q9MA49" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9MA49-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 184, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9MA49-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9MA49" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MA49", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA49" }, { "id": "PRU01088", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU01088" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Jacalin-type lectin", "eco_id": "ECO_0000255", "start_pos": 4, "end_pos": 163, "start_aa": "Lys", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 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"publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MA52-1", "uniprot_ac": "Q9MA52", "uniprot_id": "Q9MA52_ARATH", "mass": { "chemical_mass": 54260.0, "monoisotopic_mass": 54260.0 }, "refseq": {}, "gene_names": [ { "name": "F22F7.17", "type": "synonym", "evidence": [ { "id": "Q9MA52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA52" } ] }, { "name": "F22F7_17", "type": "synonym", "evidence": [ { "id": "Q9MA52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA52" } ] } ], "protein_names": [ { "name": "S-adenosyl-L-methionine-dependent methyltransferase", "type": "synonym", "evidence": [ { "id": "Q9MA52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MA52/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": 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P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MAA6", "url": "https://www.uniprot.org/uniprotkb/Q9MAA6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": 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"MEPENPQLFTLRSETPEKESVPAQTEDQSRERVSDLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELKQRQVQERSIQDGPSVDAEPLTQQRNHNDEDKEKDSASVLSASVQIIENDEDHEPVMCVVDSEFNDFRKTMSSFMAGQVWALYDGIDSMPRCYGRIKKVNKCQSSLQVTWLEPKAEESVLAACGRFKWENTDTIQSHLAFSHEIHPIIRGKHFIAVNPSKGETWALFRDWSKSWNNDPEQHKTPYRYDFVEVLVSFDDSLGVGVAYLGKVQGFASVYKQAVQHGVISFMITPEEMQRFSHRVPSFRLNGDEKEGIPSCYPCCYPQLHTRA", "length": 372, "header": "tr|Q9MAA8-1|Q9MAA8_ARATH Isoform 1 of Early endosome antigen-like protein, putative (DUF3444) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9MAA8-1" }, "isoforms": [ { "isoform_ac": "Q9MAA8-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAA8/entry#Q9MAA8-1", "sequence": { "sequence": 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E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MAA8", "url": "https://www.uniprot.org/uniprotkb/Q9MAA8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAA8", "url": "https://www.uniprot.org/uniprotkb/Q9MAA8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G05110", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05110", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9MAA8", "url": "https://www.uniprot.org/uniprotkb/Q9MAA8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], 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"uniprot_ac": "Q9MAA9", "uniprot_id": "Q9MAA9_ARATH", "mass": { "chemical_mass": 37719.0, "monoisotopic_mass": 37719.0 }, "refseq": {}, "gene_names": [ { "name": "T12H1.6", "type": "synonym", "evidence": [ { "id": "Q9MAA9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9" } ] }, { "name": "T12H1_6", "type": "synonym", "evidence": [ { "id": "Q9MAA9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9" } ] } ], "protein_names": [ { "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9MAA9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAA9", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9", "locus": {} } ], "crossref": [ { "id": "cd02440", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02440", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "819672", "url": "https://www.ncbi.nlm.nih.gov/gene/819672", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9MAA9", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9MAA9*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR013217", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013217", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G05100", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G05100", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EIWFEFQ", "url": "https://omabrowser.org/oma/group/EIWFEFQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR37886", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37886", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37886:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37886:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08242", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08242", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G05100", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G05100", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MAA9", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAA9-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFSSSSSSPAMQKGIFVSMPVLVLTVSFVAAVFFLLSSSFSSCSCPEALSSSPTDAVEASVGGSGGDVRFEDRISPTQDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLADLIQYKGISHYEGDEANNHTALPCPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPNSRVLEIGCGTLRVGLHFIRYLSPQHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGDDMEFSKFGSDTAYDLIYASAVFLHMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRLGQDKCSQKLASLGLEYLGKQTHDSLLFNHYEIWFGFRRFKT", "length": 336, "header": "tr|Q9MAA9-1|Q9MAA9_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAA9-1" }, "isoforms": [ { "isoform_ac": "Q9MAA9-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9/entry#Q9MAA9-1", "sequence": { "sequence": "MAFSSSSSSPAMQKGIFVSMPVLVLTVSFVAAVFFLLSSSFSSCSCPEALSSSPTDAVEASVGGSGGDVRFEDRISPTQDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLADLIQYKGISHYEGDEANNHTALPCPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPNSRVLEIGCGTLRVGLHFIRYLSPQHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGDDMEFSKFGSDTAYDLIYASAVFLHMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRLGQDKCSQKLASLGLEYLGKQTHDSLLFNHYEIWFGFRRFKT", "length": 336, "header": "tr|Q9MAA9-1|Q9MAA9_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAA9-1" }, "locus": { "chromosome": "3", "start_pos": 1424057, "end_pos": 1426563, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G05100.1", "url": "https://www.ensemblgenomes.org/id/AT3G05100.1" }, { "database": "Ensembl Peptide", "id": "AT3G05100.1", "url": "https://www.ensemblgenomes.org/id/AT3G05100.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MAA9", "url": "https://www.uniprot.org/uniprotkb/Q9MAA9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", 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"url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9MAB5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAB5" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": 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"MGSKNKKQRKGESIEEAKGSSGVAEEGNEMIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGKRRTGGTGKDSLREFYRIEDEGKQKTEEESGDESGSETEINDLKSEKSSHVESEEESESELKVASLDDESDEKADSEELSSQEEEEEEDDTDEDDEAMYEDEGPEIPEENIPLIQEETHRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVIDGDKKNDASDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADYLYKSCDGIEFERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQMSKVNLSWDEDEPHRIKTLNQKFNPEQLANLEMKEFLASDESDSDEEDDLGNEVINQSKKKDKKKDKYRALIEAEDVDSDKDLEEENDQDMEVTFNTGLEDLSKEILKKKDNQSESVWETYLRQRREKKRARKNKQKDDDSSPDDDDDYNIDRKAVKDDGDDDFFMEEPPLKKKKKEGKTKKEEVAAEEKSRAELELLLADENAGDGNGLKGYNIKRKAKKGKTDISEDKIPAAELDDPRFSALFSSPYYALDPTDPQFKRSATYARQLALKQKEDPKGHEDVKAPKEKQELNSDGNLGSKKERHELTSTVKSLKMKMMNKDSEKKKAGNPASSSTLAQRIKKKAKDLSKK", "length": 713, "header": "tr|Q9MAC6-1|Q9MAC6_ARATH Isoform 1 of Pre-rRNA-processing ESF1-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAC6-1" }, "isoforms": [ { "isoform_ac": "Q9MAC6-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6/entry#Q9MAC6-1", 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B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MAC6", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.", "journal": "J. Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9MAC6", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9MAC6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. Proteomics", "date": "2009", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9MAC6", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9MAC6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9MAC6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { 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signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9MAC6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9MAC6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MAC6" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "Q9MAC6", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 367, "end_pos": 369, "annotation": "n_glycosylation_sequon" }, { "start_pos": 418, "end_pos": 420, "annotation": "n_glycosylation_sequon" }, { "start_pos": 474, "end_pos": 476, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MAC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" }, { "id": "PF25121", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25121" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ESF1 RRM", "eco_id": "ECO_0000259", "start_pos": 199, "end_pos": 344, "start_aa": "Thr", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9MAC6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAC6" }, { "id": "PF08159", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08159" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NUC153", "eco_id": "ECO_0000259", "start_pos": 600, "end_pos": 623, "start_aa": "Asp", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 107, 111, 115, 117, 129, 130, 134, 138, 146, 151, 265, 401, 404, 406, 441, 503, 504 ], "sequon_annotation_sites": [ { "start_pos": 367, "end_pos": 369 }, { "start_pos": 418, "end_pos": 420 }, { "start_pos": 474, "end_pos": 476 } ] }, 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MAD0-1", "uniprot_ac": "Q9MAD0", "uniprot_id": "Q9MAD0_ARATH", "mass": { "chemical_mass": 26411.0, "monoisotopic_mass": 26411.0 }, "refseq": { "ac": "NP_001327068", "name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327068" }, "gene_names": [ { "name": "BPL6", "type": "recommended", "evidence": [ { "id": "Q9MAD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ] }, { "name": "T4P13.10", "type": "synonym", "evidence": [ { "id": "NP_001327068", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327068" }, { "id": "Q9MAD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ] }, { "name": "T4P13_10", "type": "synonym", "evidence": [ { "id": "NP_001327068", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327068" }, { "id": "Q9MAD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ] } ], "protein_names": [ { "name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "type": "synonym", "evidence": [ { "id": "NP_001327068", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327068" }, { "id": "Q9MAD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "BPL6", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0", "locus": {} } ], "crossref": [ { "id": "821275", "url": "https://www.ncbi.nlm.nih.gov/gene/821275", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G01210", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01210", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HCGAVEH", "url": "https://omabrowser.org/oma/group/HCGAVEH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9MAD0", "url": "https://www.orthodb.org/?gene=Q9MAD0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR32343", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32343", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32343:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32343:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001327068", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327068", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G01210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G01210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAD0-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYSVTVTRSDAFASSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHIGGGGSN", "length": 249, "header": "tr|Q9MAD0-1|Q9MAD0_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN=BPL6 PE=1 SV=1 CANONICAL=Q9MAD0-1" }, "isoforms": [ { "isoform_ac": "Q9MAD0-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0/entry#Q9MAD0-1", "sequence": { "sequence": "MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVYLHESNNLRQEEDYSVTVTRSDAFASSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKAAAHIGGGGSN", "length": 249, "header": "tr|Q9MAD0-1|Q9MAD0_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN=BPL6 PE=1 SV=1 CANONICAL=Q9MAD0-1" }, "locus": { "chromosome": "3", "start_pos": 71556, "end_pos": 73407, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01210.1", "url": "https://www.ensemblgenomes.org/id/AT3G01210.1" }, { "database": "Ensembl Peptide", "id": "AT3G01210.1", "url": "https://www.ensemblgenomes.org/id/AT3G01210.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01210", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "Q9MAD0", "url": "https://www.uniprot.org/uniprotkb/Q9MAD0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MAD0", "database": "UniProtKB", "url": 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{ "database": "Ensembl Peptide", "id": "AT1G53370.2", "url": "https://www.ensemblgenomes.org/id/AT1G53370.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9MAG5", "url": "https://www.uniprot.org/uniprotkb/Q9MAG5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAG5", "url": "https://www.uniprot.org/uniprotkb/Q9MAG5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G53370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G53370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 102, "end_pos": 104, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9MAG5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 376, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9MAG5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9MAG5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MAG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAG5" }, { "id": "PRU00080", "database": 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"https://www.uniprot.org/uniprotkb/Q9MAK7", "locus": {} } ], "crossref": [ { "id": "AT1G45015", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G45015", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "841067", "url": "https://www.ncbi.nlm.nih.gov/gene/841067", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039670", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039670", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G45015", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G45015", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR11306", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11306", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11306:SF54", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11306:SF54", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02221", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02221", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_683380", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683380", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G45015", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G45015", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4HPM2", "url": "https://www.uniprot.org/uniprotkb/F4HPM2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HPM2-1", "url": "https://www.uniprot.org/uniprotkb/F4HPM2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKSHYQPLFLLLASLLFLPALHAVDFKYCNGIGYVDKITKVEISPDDPSTVITISGLTRRGLVYAGTVVVASGIGEFNIPFKYYDFCQLCKCPMLSGTNFVFTLSQILIPKAFASDKLAVTLSLISRDQTEGVCVYFDFPTSANSMLNQASE", "length": 153, "header": "tr|Q9MAK7-1|Q9MAK7_ARATH Isoform 1 of MD-2-related lipid recognition domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAK7-1" }, "isoforms": [ { "isoform_ac": "F4HPM2-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7/entry#F4HPM2-1", "sequence": { "sequence": "MPSILNTATVRINFLSLKLLCIGYVDKITKVEISPDDPSTVITISGLTRRGLVYAGTVVVASGIGEFNIPFKYYDFCQLCKCPMLSGTNFVFTLSQILIPKAFASDKLAVTLSLISRDQTEGVCVYFDFPTSANSMLNQASE", "length": 142, "header": "tr|F4HPM2-1|F4HPM2_ARATH Computationally mapped isoform of MD-2-related lipid recognition domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAK7-1" }, "locus": { "chromosome": "1", "start_pos": 17021684, "end_pos": 17022781, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G45015.2", "url": "https://www.ensemblgenomes.org/id/AT1G45015.2" }, { "database": "Ensembl Peptide", "id": "AT1G45015.2", "url": "https://www.ensemblgenomes.org/id/AT1G45015.2" } ] } }, { "isoform_ac": "Q9MAK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7/entry#Q9MAK7-1", "sequence": { "sequence": "MAKSHYQPLFLLLASLLFLPALHAVDFKYCNGIGYVDKITKVEISPDDPSTVITISGLTRRGLVYAGTVVVASGIGEFNIPFKYYDFCQLCKCPMLSGTNFVFTLSQILIPKAFASDKLAVTLSLISRDQTEGVCVYFDFPTSANSMLNQASE", "length": 153, "header": "tr|Q9MAK7-1|Q9MAK7_ARATH Isoform 1 of MD-2-related lipid recognition domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAK7-1" }, "locus": { "chromosome": "1", "start_pos": 17021514, "end_pos": 17022795, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G45015.1", "url": "https://www.ensemblgenomes.org/id/AT1G45015.1" }, { "database": "Ensembl Peptide", "id": "AT1G45015.1", "url": "https://www.ensemblgenomes.org/id/AT1G45015.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G45015", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G45015", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "sterol transport", "id": "GO:0015918", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015918", "evidence": [ { "database": "UniProtKB", "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "sterol binding", "id": "GO:0032934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032934", "evidence": [ { "database": "UniProtKB", "id": "Q9MAK7", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MAK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAK7" }, { "id": "SM00737", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00737" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MD-2-related lipid-recognition", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 140, "start_aa": "Phe", "end_aa": "Phe", "glycosite_overlap": "" } ], 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MAP0-1", "uniprot_ac": "Q9MAP0", "uniprot_id": "Q9MAP0_ARATH", "mass": { "chemical_mass": 38968.0, "monoisotopic_mass": 38968.0 }, "refseq": {}, "gene_names": [ { "name": "F9L11.18", "type": "synonym", "evidence": [ { "id": "Q9MAP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ] }, { "name": "F9L11_18", "type": "synonym", "evidence": [ { "id": "Q9MAP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ] } ], "protein_names": [ { "name": "O-methyltransferase family 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"https://www.uniprot.org/uniprotkb/A0A1P8AUD1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUD1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUD1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUE2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AUE2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUE2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAP0-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEQNLSSYAMILSSSSVLPMVLKTAIDLGLFDILAESGPSSASQIFSLLSNETKKHHDSSLVNRILRFLASYSILTCSVSTEHGEPFAIYGLAPVAKYFTKNQNGGGSLAPMVNLFQDKVVTDMWYNLKDSVLEGGLPFNNTHGSSAVELVGSDSRFREVFQSSMKGFNEVFIEEFLKNYNGFDGVKSLVDVGGGDGSLLSRIISKHTHIIKAINFDLPTVINTSLPSPGIEHVAGDMFTNTPKGEAIFMKWMLHSWDDDHCVKILSNCYQSLPSNGKVIVVDMVIPEFPGDTLLDRSLFQFELFMMNMNPSGKERTKKEFEILARLAGFSNVQVPFTSLCFSVLEFHKNK", "length": 352, "header": "tr|Q9MAP0-1|Q9MAP0_ARATH Isoform 1 of O-methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAP0-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AUD1-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0/entry#A0A1P8AUD1-1", "sequence": { "sequence": "MEEQNLSSYAMILSSSSVLPMVLKTAIDLGLFDILAESGPSSASQIFSLLSNETKKHHDSSLVNRILRFLASYSILTCSVSTEHGEPFAIYGLAPVAKYFTKNQNGGGSLAPMVNLFQDKVVTDMWYNLKDSVLEGGLPFNNTHGSSAVELVGSDSRFREVFQSSMKGFNEVFIEEFLKNYNGFDGVKSLVDVGGGDGSLLSRIISKHTHIIKAINFDLPTVINTSLPSPGIEHVAGDMFTNTPKGEAIFMKVNFFKSFLKS", "length": 262, "header": "tr|A0A1P8AUD1-1|A0A1P8AUD1_ARATH Computationally mapped isoform of O-methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAP0-1" }, "locus": { "chromosome": "1", "start_pos": 11964776, "end_pos": 11966280, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G33030.2", "url": "https://www.ensemblgenomes.org/id/AT1G33030.2" }, { "database": "Ensembl Peptide", "id": "AT1G33030.2", "url": "https://www.ensemblgenomes.org/id/AT1G33030.2" } ] } }, { "isoform_ac": "A0A1P8AUE2-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0/entry#A0A1P8AUE2-1", "sequence": { "sequence": "MEEQNLSSYAMILSSSSVLPMVLKTAIDLGLFDILAESGPSSASQIFSLLSNETKKHHDSSLVNRILRFLASYSILTCSVSTEHGEPFAIYGLAPVAKYFTKNQNGGGSLAPMVNLFQDKVVTDMWYNLKDSVLEGGLPFNNTHGSSAVELVGSDSRFREVFQSSMKGFNEVFIEEFLKNYNGFDGVKSLVDVGGGDGSLLSRIISKHTHIIKAINFDLPTVINTSLPSPGIEHVAGDMFTNTPKGEAIFMKVSCVFATTYNSGCSIAGTMTIA", "length": 274, "header": "tr|A0A1P8AUE2-1|A0A1P8AUE2_ARATH Computationally mapped isoform of O-methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAP0-1" }, "locus": { "chromosome": "1", "start_pos": 11964776, "end_pos": 11966320, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G33030.3", "url": "https://www.ensemblgenomes.org/id/AT1G33030.3" }, { "database": "Ensembl Peptide", "id": "AT1G33030.3", "url": "https://www.ensemblgenomes.org/id/AT1G33030.3" } ] } }, { "isoform_ac": "Q9MAP0-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0/entry#Q9MAP0-1", "sequence": { "sequence": "MEEQNLSSYAMILSSSSVLPMVLKTAIDLGLFDILAESGPSSASQIFSLLSNETKKHHDSSLVNRILRFLASYSILTCSVSTEHGEPFAIYGLAPVAKYFTKNQNGGGSLAPMVNLFQDKVVTDMWYNLKDSVLEGGLPFNNTHGSSAVELVGSDSRFREVFQSSMKGFNEVFIEEFLKNYNGFDGVKSLVDVGGGDGSLLSRIISKHTHIIKAINFDLPTVINTSLPSPGIEHVAGDMFTNTPKGEAIFMKWMLHSWDDDHCVKILSNCYQSLPSNGKVIVVDMVIPEFPGDTLLDRSLFQFELFMMNMNPSGKERTKKEFEILARLAGFSNVQVPFTSLCFSVLEFHKNK", "length": 352, "header": "tr|Q9MAP0-1|Q9MAP0_ARATH Isoform 1 of O-methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MAP0-1" }, "locus": { "chromosome": "1", "start_pos": 11964776, "end_pos": 11966320, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G33030.1", "url": "https://www.ensemblgenomes.org/id/AT1G33030.1" }, { "database": "Ensembl Peptide", "id": "AT1G33030.1", "url": "https://www.ensemblgenomes.org/id/AT1G33030.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G33030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G33030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "pmid": "" }, { "name": "O-methyltransferase activity", "id": "GO:0008171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008171", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP0", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 141, "end_pos": 143, "annotation": "n_glycosylation_sequon" }, { "start_pos": 224, "end_pos": 226, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9MAP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" }, { "id": "PF00891", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00891" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "O-methyltransferase C-terminal", "eco_id": "ECO_0000259", "start_pos": 126, "end_pos": 332, "start_aa": "Trp", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9MAP0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP0" }, { "id": "PF08100", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08100" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "O-methyltransferase dimerisation", "eco_id": "ECO_0000259", "start_pos": 13, "end_pos": 102, "start_aa": "Leu", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 141, "end_pos": 143 }, { "start_pos": 224, "end_pos": 226 }, { "start_pos": 52, "end_pos": 54 }, { "start_pos": 5, "end_pos": 7 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MAP1-1", "uniprot_ac": "Q9MAP1", "uniprot_id": "FB33_ARATH", "mass": { "chemical_mass": 64126.0, "monoisotopic_mass": 64126.0 }, "refseq": {}, "gene_names": [ { "name": "F9L11.17", "type": "synonym", "evidence": [ { "id": "Q9MAP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1" } ] } ], "protein_names": [ { "name": "Putative F-box protein At1g33020", "type": "recommended", "evidence": [ { "id": "Q9MAP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAP1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1", "locus": {} } ], "crossref": [ { "id": "Q9MAP1", "url": "https://alphafold.ebi.ac.uk/entry/Q9MAP1", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G33020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G33020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "840197", "url": "https://www.ncbi.nlm.nih.gov/gene/840197", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G33020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G33020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FRVICNP", "url": "https://omabrowser.org/oma/group/FRVICNP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF130", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF130", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9MAP1", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9MAP1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT1G33020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G33020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MAP1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAP1-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRAENLDSIPTDLILEIFSRMSTKSIGRCRCVSKLWKSMLGHPYFTELFLTRSSDHPRLLFGVKRERQWLFFSSPQPQDLYEKSSLVDFHMNFSDFHMNFSGDIRRNECTYVSGFIYFPRKRIKNYLCDFRVICNPITGQYAILQLITFHEKRSFLGFDPIDKQFKVLRMKYNDRGIVVHHILTLEPGKMRWRKIRCPLAHEPFWEEICANGVLYYLAEPTDGGSYVICCFDVRSEKFKFIDAKCFGDFSIQLINYKGKLGGISWKYDTVDGKRTVELYMWVLEDVEKQKWSKYVYPLPGNSYHYSVAGVTAKGDIVFVKTYTSKPFYVFYVNPEKKTFQRVEIHGNHEVFDTNNLVYAFVDHVEDLQFDVMKKTYAAKPISPPKQKPKPPSTETSSREDHQGWISISSRKYHQVRTIAHRQQGRRKFESINKFNALYLDDGDEDTVAHQQRDHHTFKSISKFKAQRLLDDDEFTGVKTSKCDTSHLQNRVTAVHELHIWSITVGKVSLASQVSIKPEADTDAILDKVIEYIKRHHVTIQVEKEQNP", "length": 548, "header": "sp|Q9MAP1-1|FB33_ARATH Isoform 1 of Putative F-box protein At1g33020 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9MAP1-1" }, "isoforms": [ { "isoform_ac": "Q9MAP1-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP1/entry#Q9MAP1-1", "sequence": { "sequence": 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"common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9", "locus": {} } ], "crossref": [ { "id": "AT1G32910", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G32910", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "840185", "url": "https://www.ncbi.nlm.nih.gov/gene/840185", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR023213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050317", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050317", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G32910", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G32910", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WVEIHRP", "url": "https://omabrowser.org/oma/group/WVEIHRP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31642", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31642", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31642:SF266", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31642:SF266", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02458", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02458", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G32910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G32910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MAP9", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDAAEQERGFHVITIRKQIVTAALPLQDHWLPLSNLDLLLPPVQISVCFCYKKPRHFLSVAETLKASLAEALVSYYAFAGELVKNSSGEPEILCNNRGVDFLEAVADVELRELNLHDPDESIAKLVPKKKHGVIAIQVTQLKCGSIVVGCTFDHRIADAFSMNMFLVSWAEISRFNAPISSVPSFRRSILNPRRPLIIDSSIDKMYMPVTSLPLPQETTNDLDNILTSRIYYIKENALEDLQTLASGSSPKTGYGQRTKLESFSAFLWKLVAKHTGRDLVSNKNSKMGIVVDGRRRLMEKEDNTYFGNVLSIPFGGQSIDDLIDKPLSWVTNEVHRFLEEAVTKEHFLNLIDWVEIHRPIPAVSRIYSTGTDDGPAFVVSSGRSFPVNKVDFGWGLPVFGSYHFPWEGSSGYVMPMPSPVDDGNGDWVVYLHLTKGQLKFIEEEASHVLKPIDNYYLKINTIN", "length": 464, "header": "tr|Q9MAP9-1|Q9MAP9_ARATH Isoform 1 of HXXXD-type acyl-transferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9MAP9-1" }, "isoforms": [ { "isoform_ac": "Q9MAP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9/entry#Q9MAP9-1", "sequence": { "sequence": "MEDAAEQERGFHVITIRKQIVTAALPLQDHWLPLSNLDLLLPPVQISVCFCYKKPRHFLSVAETLKASLAEALVSYYAFAGELVKNSSGEPEILCNNRGVDFLEAVADVELRELNLHDPDESIAKLVPKKKHGVIAIQVTQLKCGSIVVGCTFDHRIADAFSMNMFLVSWAEISRFNAPISSVPSFRRSILNPRRPLIIDSSIDKMYMPVTSLPLPQETTNDLDNILTSRIYYIKENALEDLQTLASGSSPKTGYGQRTKLESFSAFLWKLVAKHTGRDLVSNKNSKMGIVVDGRRRLMEKEDNTYFGNVLSIPFGGQSIDDLIDKPLSWVTNEVHRFLEEAVTKEHFLNLIDWVEIHRPIPAVSRIYSTGTDDGPAFVVSSGRSFPVNKVDFGWGLPVFGSYHFPWEGSSGYVMPMPSPVDDGNGDWVVYLHLTKGQLKFIEEEASHVLKPIDNYYLKINTIN", "length": 464, "header": "tr|Q9MAP9-1|Q9MAP9_ARATH Isoform 1 of HXXXD-type acyl-transferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9MAP9-1" }, "locus": { "chromosome": "1", "start_pos": 11925320, "end_pos": 11927302, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G32910.1", "url": "https://www.ensemblgenomes.org/id/AT1G32910.1" }, { "database": "Ensembl Peptide", "id": "AT1G32910.1", "url": "https://www.ensemblgenomes.org/id/AT1G32910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP9", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP9", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G32910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G32910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP9", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "acyltransferase activity, transferring groups other than amino-acyl groups", "id": "GO:0016747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016747", "evidence": [ { "database": "UniProtKB", "id": "Q9MAP9", "url": "https://www.uniprot.org/uniprotkb/Q9MAP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 86, "end_pos": 88, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14571:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF24659", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24659", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001077646", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077646", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G32810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G32810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MAQ7", "url": "https://www.uniprot.org/uniprotkb/Q9MAQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MAQ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MAQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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Biotin/lipoate A/B protein ligase family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LRG5-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG4/entry#A0A1I9LRG5-1", "sequence": { "sequence": "MEDRIPVIKRFTGGGTVIVDKSTLFVSLICNKDDVPNVQPYPRSVMAWSGSLYDEVFKSVNGFQLRENDYVFGDRKFGGNAQSIIKNRWIHHTSFLWDYDVRNMAYLKLPSRVPQYRLERDHTDFVCRMKDYIERSDFVEKTVKAVRNQFTLKQVNLEDIDSYAKGGYLKTTRLLTMEELEEAMADTIQNT", "length": 191, "header": "tr|A0A1I9LRG5-1|A0A1I9LRG5_ARATH Computationally mapped isoform of Biotin/lipoate A/B protein ligase family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG4-1" }, "locus": { "chromosome": "3", "start_pos": 11006564, "end_pos": 11008170, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29010.2", "url": "https://www.ensemblgenomes.org/id/AT3G29010.2" }, { "database": "Ensembl Peptide", "id": "AT3G29010.2", "url": "https://www.ensemblgenomes.org/id/AT3G29010.2" } ] } }, { "isoform_ac": "A0A1I9LRG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG4/entry#A0A1I9LRG7-1", "sequence": { "sequence": "MSLSRAKDLRLPLMNLVRLKGTPILEQLHLEERLLRTSSDNWCIVNDGTNVPTIVMGMSGKPSQLLEVGPVMEDRIPVIKRFTGGGTVIVDKSTLFVSLICNKDDVPNVQPYPRSVMAWSGSLYDEVFKSVNGFQLRENDYVFGDRKFGGNAQSIIKNRWIHHTSFLWDYDVRNMAYLKLPSRVPQYRLVCSLFHLDLNVF", "length": 201, "header": "tr|A0A1I9LRG7-1|A0A1I9LRG7_ARATH Computationally mapped isoform of Biotin/lipoate A/B protein ligase family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG4-1" }, "locus": { "chromosome": "3", "start_pos": 11006582, "end_pos": 11008216, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29010.4", "url": "https://www.ensemblgenomes.org/id/AT3G29010.4" }, { "database": "Ensembl Peptide", "id": "AT3G29010.4", "url": "https://www.ensemblgenomes.org/id/AT3G29010.4" } ] } }, { "isoform_ac": "Q9MBG4-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG4/entry#Q9MBG4-1", "sequence": { "sequence": "MSLSRAKDLRLPLMNLVRLKGTPILEQLHLEERLLRTSSDNWCIVNDGTNVPTIVMGMSGKPSQLLEVGPVMEDRIPVIKRFTGGGTVIVDKSTLFVSLICNKDDVPNVQPYPRSVMAWSGSLYDEVFKSVNGFQLRENDYVFGDRKFGGNAQSIIKNRWIHHTSFLWDYDVRNMAYLKLPSRVPQYRLERDHTDFVCRMKDYIERSDFVEKTVKAVRNQFTLKQVNLEDIDSYAKGGYLKTTRLLTMEELEEAMADTIQNT", "length": 262, "header": "tr|Q9MBG4-1|Q9MBG4_ARATH Isoform 1 of Biotin/lipoate A/B protein ligase family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG4-1" }, "locus": { "chromosome": "3", "start_pos": 11006582, "end_pos": 11008216, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G29010.1", "url": "https://www.ensemblgenomes.org/id/AT3G29010.1" }, { "database": "Ensembl Peptide", "id": "AT3G29010.1", "url": "https://www.ensemblgenomes.org/id/AT3G29010.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 164, "end_pos": 164, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9MBG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MBG4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr164" }, { "start_pos": 177, "end_pos": 177, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9MBG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MBG4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Tyr177" }, { "start_pos": 182, "end_pos": 182, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9MBG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MBG4" } ], "site_lbl": "Ser182" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG4", "url": "https://www.uniprot.org/uniprotkb/Q9MBG4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9MBG4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MBG4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG4", "url": "https://www.uniprot.org/uniprotkb/Q9MBG4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G29010", "name": "", "url": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "MDQTECV", "url": "https://omabrowser.org/oma/group/MDQTECV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31871", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31871", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31871:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31871:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09713", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09713", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189541", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189541", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G28990", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G28990", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9MBG6", 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"evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28990.1", "url": "https://www.ensemblgenomes.org/id/AT3G28990.1" }, { "database": "Ensembl Peptide", "id": "AT3G28990.1", "url": "https://www.ensemblgenomes.org/id/AT3G28990.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG6", "url": "https://www.uniprot.org/uniprotkb/Q9MBG6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG6", "url": "https://www.uniprot.org/uniprotkb/Q9MBG6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G28990", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G28990", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG6", "url": "https://www.uniprot.org/uniprotkb/Q9MBG6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of chlorophyll biosynthetic process", "id": "GO:1902326", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902326", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG6", "url": "https://www.uniprot.org/uniprotkb/Q9MBG6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9MBG7-1", "uniprot_ac": "Q9MBG7", "uniprot_id": "Q9MBG7_ARATH", "mass": { "chemical_mass": 48835.0, "monoisotopic_mass": 48835.0 }, "refseq": { "ac": "NP_189540", "name": "mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189540" }, "gene_names": [], "protein_names": [ { "name": "Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216)", "type": "synonym", "evidence": [ { "id": "Q9MBG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#names_and_taxonomy" } ] }, { "name": "mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216)", "type": "synonym", "evidence": [ { "id": "NP_189540", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189540" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MBG7", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7", "locus": {} } ], "crossref": [ { "id": "AT3G28980", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G28980", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "822538", "url": "https://www.ncbi.nlm.nih.gov/gene/822538", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009605", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009605", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G28980", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G28980", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KKDDADM", "url": "https://omabrowser.org/oma/group/KKDDADM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31607", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31607", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31607:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31607:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06746", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06746", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_189540", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189540", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G28980", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G28980", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQW8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQW8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQW9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQX0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MBG7", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9MBG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSAKNESKTSAKGESETSAKGESKTSAKGESETSAKGESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 445, "header": "tr|Q9MBG7-1|Q9MBG7_ARATH Isoform 1 of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQW8-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#A0A1I9LQW8-1", "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSAKNESKTSAKGESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 421, "header": "tr|A0A1I9LQW8-1|A0A1I9LQW8_ARATH Computationally mapped isoform of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "locus": { "chromosome": "3", "start_pos": 10993190, "end_pos": 10995002, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28980.5", "url": "https://www.ensemblgenomes.org/id/AT3G28980.5" }, { "database": "Ensembl Peptide", "id": "AT3G28980.5", "url": "https://www.ensemblgenomes.org/id/AT3G28980.5" } ] } }, { "isoform_ac": "A0A1I9LQW9-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#A0A1I9LQW9-1", "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSAKNESKTSAKGESETSAKGESKTSAKGESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 437, "header": "tr|A0A1I9LQW9-1|A0A1I9LQW9_ARATH Computationally mapped isoform of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "locus": { "chromosome": "3", "start_pos": 10993190, "end_pos": 10995002, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28980.4", "url": "https://www.ensemblgenomes.org/id/AT3G28980.4" }, { "database": "Ensembl Peptide", "id": "AT3G28980.4", "url": "https://www.ensemblgenomes.org/id/AT3G28980.4" } ] } }, { "isoform_ac": "A0A1I9LQX0-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#A0A1I9LQX0-1", "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 397, "header": "tr|A0A1I9LQX0-1|A0A1I9LQX0_ARATH Computationally mapped isoform of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "locus": { "chromosome": "3", "start_pos": 10993173, "end_pos": 10995006, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28980.3", "url": "https://www.ensemblgenomes.org/id/AT3G28980.3" }, { "database": "Ensembl Peptide", "id": "AT3G28980.3", "url": "https://www.ensemblgenomes.org/id/AT3G28980.3" } ] } }, { "isoform_ac": "A0A1I9LQX1-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#A0A1I9LQX1-1", "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 405, "header": "tr|A0A1I9LQX1-1|A0A1I9LQX1_ARATH Computationally mapped isoform of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "locus": { "chromosome": "3", "start_pos": 10993117, "end_pos": 10995006, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28980.2", "url": "https://www.ensemblgenomes.org/id/AT3G28980.2" }, { "database": "Ensembl Peptide", "id": "AT3G28980.2", "url": "https://www.ensemblgenomes.org/id/AT3G28980.2" } ] } }, { "isoform_ac": "Q9MBG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7/entry#Q9MBG7-1", "sequence": { "sequence": "MARVQLLLCFTILFASVTLLDLVSAHLKFKPSLPQIEDPKTVKDVEPYTVKVVMVFVADLEKECPKTNKFKAFFEKLRGFAKYVCPIRRIGQVDYDRDMKAKAGGIFKAISSFAIGKIREEIQEEKQEAIDTFRFMKSVAAKIMGGRKKEENEETMTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSASSSEESSVGKESETSAKGESETSAKNESKTSAKGESETSAKGESKTSAKGESETSAKGESETSAKGESETSSSKTAEASQSSSLTVTQVEEETSKDVSTFIMNLEKKCPQKEEFKVFFEQLKGTMIAPRKERKGLFSRIKTAAGKISGAMQVMRSRIGSKSAEVKKNMEAYQEQVMKTLEELDTIHAQIVSQNKGKASLTCTPTQQVQIKQTITKWEQVTTQFVEVAAQSESSASSSSSSSSSSSSSGKMQAK", "length": 445, "header": "tr|Q9MBG7-1|Q9MBG7_ARATH Isoform 1 of Mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9MBG7-1" }, "locus": { "chromosome": "3", "start_pos": 10993190, "end_pos": 10995006, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G28980.1", "url": "https://www.ensemblgenomes.org/id/AT3G28980.1" }, { "database": "Ensembl Peptide", "id": "AT3G28980.1", "url": "https://www.ensemblgenomes.org/id/AT3G28980.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 390, "end_pos": 390, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9MBG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9MBG7" } ], "site_lbl": "Ser390" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", 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H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG7", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG7", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G28980", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G28980", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9MBG7", "url": "https://www.uniprot.org/uniprotkb/Q9MBG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 218, "end_pos": 220, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": 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"https://www.uniprot.org/uniprotkb/Q9S701" } ] } ], "protein_names": [ { "name": "Hydroxyproline-rich glycoprotein family protein", "type": "synonym", "evidence": [ { "id": "Q9S701", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S701/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S701", "url": "https://www.uniprot.org/uniprotkb/Q9S701" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S701", "locus": {} } ], "crossref": [ { "id": "837622", "url": "https://www.ncbi.nlm.nih.gov/gene/837622", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9S701", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9S701*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR055464", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055464", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G10790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G10790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FWLFPRR", "url": "https://omabrowser.org/oma/group/FWLFPRR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33826", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33826", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33826:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33826:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G10790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G10790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S701", "url": "https://www.uniprot.org/uniprotkb/Q9S701", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S701-1", "url": "https://www.uniprot.org/uniprotkb/Q9S701-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKHSKENALALQQETLDLENPESSPRSSGRSCSSAFSRLVGLRCLIVLVLSCAILLSAIFWLFPRRSVSEFKADGTVKLNASVQASFRLQKPVSEVVRHKGKIEHDILRSIGLSNNSKVTVLSLNQSGASNYTDVEFAVLPVPPDHEISKHSLSLLRSSFVKLFAKRSKLKLTTSGFGKPTSFQVLKFPGGITVDPLEPAPVSGVALVLFSVTIKTSISTVQDRLDLLNGLFEHMLSLEPYESVHFQLTNKQGSTISPPLTFQVYVAFTMRKYLHQRLNHFTQIIQTSRAKNLGLDEAVFGEVKDITFSTYLDGKVPDSDLELAPAPTPCLSSLC", "length": 336, "header": "tr|Q9S701-1|Q9S701_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S701-1" }, "isoforms": [ { "isoform_ac": "Q9S701-1", "url": "https://www.uniprot.org/uniprotkb/Q9S701/entry#Q9S701-1", "sequence": { "sequence": "MKKHSKENALALQQETLDLENPESSPRSSGRSCSSAFSRLVGLRCLIVLVLSCAILLSAIFWLFPRRSVSEFKADGTVKLNASVQASFRLQKPVSEVVRHKGKIEHDILRSIGLSNNSKVTVLSLNQSGASNYTDVEFAVLPVPPDHEISKHSLSLLRSSFVKLFAKRSKLKLTTSGFGKPTSFQVLKFPGGITVDPLEPAPVSGVALVLFSVTIKTSISTVQDRLDLLNGLFEHMLSLEPYESVHFQLTNKQGSTISPPLTFQVYVAFTMRKYLHQRLNHFTQIIQTSRAKNLGLDEAVFGEVKDITFSTYLDGKVPDSDLELAPAPTPCLSSLC", "length": 336, "header": "tr|Q9S701-1|Q9S701_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S701-1" }, "locus": { "chromosome": "1", "start_pos": 3596264, "end_pos": 3597847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G10790.1", "url": "https://www.ensemblgenomes.org/id/AT1G10790.1" }, { "database": "Ensembl Peptide", "id": "AT1G10790.1", "url": "https://www.ensemblgenomes.org/id/AT1G10790.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 329, "start_aa": "Thr", "end_pos": 329, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr329", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9S701", "url": "https://www.uniprot.org/uniprotkb/Q9S701" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S701", "url": "https://www.uniprot.org/uniprotkb/Q9S701" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G10790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G10790", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 132, "end_pos": 134, "annotation": "n_glycosylation_sequon" }, { "start_pos": 81, "end_pos": 83, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S701", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S701" }, { "id": "PF23041", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23041" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF7036", "eco_id": "ECO_0000259", "start_pos": 87, "end_pos": 179, "start_aa": "Ser", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 329 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 126, "end_pos": 128 }, { "start_pos": 132, "end_pos": 134 }, { "start_pos": 81, "end_pos": 83 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"url": "https://www.ncbi.nlm.nih.gov/protein/NP_187556" }, "gene_names": [], "protein_names": [ { "name": "Fusaric acid resistance family protein", "type": "synonym", "evidence": [ { "id": "Q9S710", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S710/entry#names_and_taxonomy" } ] }, { "name": "fusaric acid resistance family protein", "type": "synonym", "evidence": [ { "id": "NP_187556", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187556" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S710", "url": "https://www.uniprot.org/uniprotkb/Q9S710" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S710", "locus": {} } ], "crossref": [ { "id": "820103", "url": "https://www.ncbi.nlm.nih.gov/gene/820103", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006726", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006726", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09450", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09450", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FNGEVAH", "url": "https://omabrowser.org/oma/group/FNGEVAH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S710", "url": "https://www.orthodb.org/?gene=Q9S710", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR30509", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR30509", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR30509:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR30509:SF34", 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"MRDTTWLERLGLALRTAMACLIVSLTTLYGPKPLRHFTTFPAFSYLTTILIWLSDAEPTYGEVLKCCLDVSYATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAFGQIVVVYVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKLYAENALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTRFLSRKQKLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLLEGPRTHIAPRSESTLKSQDSLGWHHEAESLSTAALPVCFFRYCVELFRGDFLSLRQDSKSVNGRTTEEEIHPANEGLSMARKFWDILCVWMARERFVFAFKCSISLGLAVLFGILYNKNNGYWSGLTVAISLVSGRQATLTVANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWIILAVFMRHSKVYGQPGGVTAAIAALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILVTPARAATLARTEISHCLDALLDCIQSLVLCSEQKNQKVVADLRKSQVKLKSHVEALERFAAEALTEPKIPFLRRLNTDSYNRLLGSFSKISDLCLYVCDGLKNLSGVQPTLAFPWDNITHELRAFQEKLHPSVKCLKEISQTKSQARLQKELQKRKICHDVEAGTTSNDNYSYMELGPSQADVERFSVSFVMLLKEATDKISCNTADDAFKSETALCLSSLGFCISRLMQETICIMTEITHTT", "length": 775, "header": "tr|Q9S710-1|Q9S710_ARATH Isoform 1 of Fusaric acid resistance family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S710-1" }, "isoforms": [ { "isoform_ac": "Q9S710-1", "url": 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GN= PE=4 SV=1 CANONICAL=Q9S710-1" }, "locus": { "chromosome": "3", "start_pos": 2907479, "end_pos": 2910206, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G09450.1", "url": "https://www.ensemblgenomes.org/id/AT3G09450.1" }, { "database": "Ensembl Peptide", "id": "AT3G09450.1", "url": "https://www.ensemblgenomes.org/id/AT3G09450.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S710", "url": "https://www.uniprot.org/uniprotkb/Q9S710" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S710", "url": "https://www.uniprot.org/uniprotkb/Q9S710" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G09450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09450", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9S710", "url": "https://www.uniprot.org/uniprotkb/Q9S710" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9S710", "url": "https://www.uniprot.org/uniprotkb/Q9S710" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 206, "end_pos": 208, "annotation": "n_glycosylation_sequon" }, { "start_pos": 635, "end_pos": 637, "annotation": "n_glycosylation_sequon" }, { "start_pos": 649, "end_pos": 651, "annotation": 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Classification" ] }, { "id": "PTHR33128", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33128", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33128:SF49", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33128:SF49", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11820", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11820", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_186844", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186844", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G01950", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G01950", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S721", "url": "https://www.uniprot.org/uniprotkb/Q9S721", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S721-1", "url": 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PE=4 SV=1 CANONICAL=Q9S781-1" }, "locus": { "chromosome": "1", "start_pos": 27498955, "end_pos": 27502273, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G73130.3", "url": "https://www.ensemblgenomes.org/id/AT1G73130.3" }, { "database": "Ensembl Peptide", "id": "AT1G73130.3", "url": "https://www.ensemblgenomes.org/id/AT1G73130.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 59, "end_pos": 59, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S781", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S781" } ], "site_lbl": "Ser59" }, { "start_pos": 60, "end_pos": 60, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S781", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S781" } ], "site_lbl": "Ser60" } ], "glycation": [], 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}, { "id": "IPR044789", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044789", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ENDQFHR", "url": "https://omabrowser.org/oma/group/ENDQFHR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S790", "url": "https://www.orthodb.org/?gene=Q9S790", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46781", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46781", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46781:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46781:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04488", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04488", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04572", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04572", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187514", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G09020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S790", "url": "https://www.uniprot.org/uniprotkb/Q9S790", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S790-1", "url": "https://www.uniprot.org/uniprotkb/Q9S790-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDHDITTKVRAMFDHRRLNRSGSSLFTAFASTVIALVVFTIVLVSNLSVREDFSAKVVTIEIKTIVPYLPLSSEKEVSDQVNNNYSIKQQITVKEEINKLQVLEVFGGKDVSEKFQQRATEFLRDDCEVKFMMTWISPAELFGKREILSVESVFKSHARGCLMILSSTMDSLQGFRILKPFLDRGYRVMAVTPDLPFLLKDTAGESWLEEIQTGKRDPGKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSFKTLRNVIGAQTLEPVSRNWTRLNNAVLIFDKNHPFLLKSIEEFALTFNGNVWGHNGPYLVSRVARAVEGTDGYNFTILTPPAFYPVNWVEIEKLFKVPRTEKDSKRVQVKVLEMQKRSYGLHLWNKFSRKFEIEQGSAMDKLVSNQCIICDSVVSVS", "length": 411, "header": "tr|Q9S790-1|Q9S790_ARATH Isoform 1 of Alpha 1,4-glycosyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S790-1" }, "isoforms": [ { "isoform_ac": "Q9S790-1", "url": "https://www.uniprot.org/uniprotkb/Q9S790/entry#Q9S790-1", "sequence": { "sequence": "MDHDITTKVRAMFDHRRLNRSGSSLFTAFASTVIALVVFTIVLVSNLSVREDFSAKVVTIEIKTIVPYLPLSSEKEVSDQVNNNYSIKQQITVKEEINKLQVLEVFGGKDVSEKFQQRATEFLRDDCEVKFMMTWISPAELFGKREILSVESVFKSHARGCLMILSSTMDSLQGFRILKPFLDRGYRVMAVTPDLPFLLKDTAGESWLEEIQTGKRDPGKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSFKTLRNVIGAQTLEPVSRNWTRLNNAVLIFDKNHPFLLKSIEEFALTFNGNVWGHNGPYLVSRVARAVEGTDGYNFTILTPPAFYPVNWVEIEKLFKVPRTEKDSKRVQVKVLEMQKRSYGLHLWNKFSRKFEIEQGSAMDKLVSNQCIICDSVVSVS", "length": 411, "header": "tr|Q9S790-1|Q9S790_ARATH Isoform 1 of Alpha 1,4-glycosyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S790-1" }, "locus": { "chromosome": "3", "start_pos": 2753307, "end_pos": 2754621, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G09020.1", "url": "https://www.ensemblgenomes.org/id/AT3G09020.1" }, { "database": "Ensembl Peptide", "id": "AT3G09020.1", "url": "https://www.ensemblgenomes.org/id/AT3G09020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S790", "url": "https://www.uniprot.org/uniprotkb/Q9S790" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S790", "url": "https://www.uniprot.org/uniprotkb/Q9S790" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G09020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9S790", "url": "https://www.uniprot.org/uniprotkb/Q9S790" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "Q9S790", "url": "https://www.uniprot.org/uniprotkb/Q9S790" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 19, "end_pos": 21, "annotation": "n_glycosylation_sequon" }, { "start_pos": 226, "end_pos": 228, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { "start_pos": 328, "end_pos": 330, "annotation": "n_glycosylation_sequon" }, { "start_pos": 46, "end_pos": 48, "annotation": "n_glycosylation_sequon" }, { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S790", "database": 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"uniprot_canonical_ac": "Q9S7A6-1", "uniprot_ac": "Q9S7A6", "uniprot_id": "Q9S7A6_ARATH", "mass": { "chemical_mass": 41368.0, "monoisotopic_mass": 41368.0 }, "refseq": { "ac": "NP_566302", "name": "phosphoserine aminotransferase, putative (DUF760)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566302" }, "gene_names": [ { "name": "T1B9.2", "type": "synonym", "evidence": [ { "id": "NP_566302", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566302" }, { "id": "Q9S7A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ] } ], "protein_names": [ { "name": "Phosphoserine aminotransferase, putative (DUF760)", "type": "synonym", "evidence": [ { "id": "Q9S7A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6/entry#names_and_taxonomy" } ] }, { "name": "phosphoserine aminotransferase, putative (DUF760)", "type": "synonym", "evidence": [ { "id": "NP_566302", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566302" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6", "locus": {} } ], "crossref": [ { "id": "AT3G07310", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G07310", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819919", "url": "https://www.ncbi.nlm.nih.gov/gene/819919", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9S7A6", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9S7A6*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR008479", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008479", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038925", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038925", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G07310", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07310", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IRWEHSI", "url": "https://omabrowser.org/oma/group/IRWEHSI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LQH8", "url": "https://www.orthodb.org/?gene=A0A1I9LQH8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9S7A6", "url": "https://www.orthodb.org/?gene=Q9S7A6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31808", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31808", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31808:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31808:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05542", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05542", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566302", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07310", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07310", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQH8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQH8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQH8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7A6-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSCLSNQTALQFLPSRSRRQSGDGGGGFVIPAKRKIQYSSMVVVAAAGQSRCEPGSSLNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADDREAALARMSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIHGSGYLKSPIFGCSFTTGTAQISNKQQLRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTEESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKENGNAEEQEGKKSI", "length": 368, "header": "tr|Q9S7A6-1|Q9S7A6_ARATH Isoform 1 of Phosphoserine aminotransferase, putative (DUF760) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7A6-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQH8-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6/entry#A0A1I9LQH8-1", "sequence": { "sequence": "MVELKQENSVVMIFRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIHGSGYLKSPIFGCSFTTGTAQISNKQQLRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTEESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKENGNAEEQEGKKSI", "length": 264, "header": "tr|A0A1I9LQH8-1|A0A1I9LQH8_ARATH Computationally mapped isoform of Phosphoserine aminotransferase, putative (DUF760) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7A6-1" }, "locus": { "chromosome": "3", "start_pos": 2327818, "end_pos": 2329926, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07310.2", "url": "https://www.ensemblgenomes.org/id/AT3G07310.2" }, { "database": "Ensembl Peptide", "id": "AT3G07310.2", "url": "https://www.ensemblgenomes.org/id/AT3G07310.2" } ] } }, { "isoform_ac": "Q9S7A6-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6/entry#Q9S7A6-1", "sequence": { "sequence": "MDSCLSNQTALQFLPSRSRRQSGDGGGGFVIPAKRKIQYSSMVVVAAAGQSRCEPGSSLNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADDREAALARMSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIHGSGYLKSPIFGCSFTTGTAQISNKQQLRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTEESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKENGNAEEQEGKKSI", "length": 368, "header": "tr|Q9S7A6-1|Q9S7A6_ARATH Isoform 1 of Phosphoserine aminotransferase, putative (DUF760) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7A6-1" }, "locus": { "chromosome": "3", "start_pos": 2327818, "end_pos": 2329926, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07310.1", "url": "https://www.ensemblgenomes.org/id/AT3G07310.1" }, { "database": "Ensembl Peptide", "id": "AT3G07310.1", "url": "https://www.ensemblgenomes.org/id/AT3G07310.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07310", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07310", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transaminase activity", "id": "GO:0008483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008483", "evidence": [ { "database": "UniProtKB", "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9S7A6", "url": "https://www.uniprot.org/uniprotkb/Q9S7A6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 7, "end_pos": 9, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 7, "end_pos": 9 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9S7D2-1", "uniprot_ac": "Q9S7D2", "uniprot_id": "Q9S7D2_ARATH", "mass": { "chemical_mass": 57614.0, "monoisotopic_mass": 57614.0 }, "refseq": { "ac": "NP_187424", "name": "Rubisco methyltransferase family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187424" }, "gene_names": [], "protein_names": [ { "name": "Rubisco methyltransferase family protein", "type": "synonym", "evidence": [ { "id": "NP_187424", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187424" }, { "id": "Q9S7D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7D2", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2", "locus": {} } ], "crossref": [ { "id": "AT3G07670", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G07670", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd19179", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19179", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "819958", "url": "https://www.ncbi.nlm.nih.gov/gene/819958", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9S7D2", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9S7D2*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015353", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015353", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036464", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036464", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044431", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044431", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050600", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050600", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G07670", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07670", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QCFPIQI", "url": "https://omabrowser.org/oma/group/QCFPIQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LLZ4", "url": "https://www.orthodb.org/?gene=A0A1I9LLZ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9S7D2", "url": "https://www.orthodb.org/?gene=Q9S7D2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13271", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13271", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13271:SF123", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13271:SF123", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00856", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00856", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09273", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09273", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187424", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187424", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07670", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07670", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LLZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LLZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7D2", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7D2-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKACLLQSTLLPAYSPLHKLRNQNITLSFSPLPLSRCRPGIHCSVSAGETTIQSMEEAPKISWGCEIDSLENATSLQNWLSDSGLPPQKMAIDRVDIGERGLVASQNLRKGEKLLFVPPSLVISADSEWTNAEAGEVMKRYDVPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYLEASQIRERAIERITNVVGTYEDLRSRIFSKHPQLFPKEVFNDETFKWSFGILFSRLVRLPSMDGRFALVPWADMLNHNCEVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGNKSNGELLLSYGFVPREGTNPSDSVELALSLRKNDKCYEEKLDALKKHGLSTPQCFPVRITGWPMELMAYAYLVVSPPDMRNNFEEMAKAASNKTSTKNDLKYPEIEEDALQFILDSCETSISKYSRFLKESGSMDLDITSPKQLNRKAFLKQLAVDLSTSERRILYRAQYILRRRLRDIRSGELKALRLFSGLRNFFK", "length": 504, "header": "tr|Q9S7D2-1|Q9S7D2_ARATH Isoform 1 of Rubisco methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7D2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2/entry#A0A1I9LLZ4-1", "sequence": { "sequence": "MKRYDVPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYLEASQIRERAIERITNVVGTYEDLRSRIFSKHPQLFPKEVFNDETFKWSFGILFSRLVRLPSMDGRFALVPWADMLNHNCEVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGNKSNGELLLSYGFVPREGTNPSDSVELALSLRKNDKCYEEKLDALKKHGLSTPQCFPVRITGWPMELMAYAYLVVSPPDMRNNFEEMAKAASNKTSTKNDLKYPEIEEDALQFILDSCETSISKYSRFLKESGSMDLDITSPKQLNRKAFLKQLAVDLSTSERRILYRAQYILRRRLRDIRSGELKALRLFSGLRNFFK", "length": 366, "header": "tr|A0A1I9LLZ4-1|A0A1I9LLZ4_ARATH Computationally mapped isoform of Rubisco methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7D2-1" }, "locus": { "chromosome": "3", "start_pos": 2451603, "end_pos": 2455100, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07670.2", "url": "https://www.ensemblgenomes.org/id/AT3G07670.2" }, { "database": "Ensembl Peptide", "id": "AT3G07670.2", "url": "https://www.ensemblgenomes.org/id/AT3G07670.2" } ] } }, { "isoform_ac": "Q9S7D2-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7D2/entry#Q9S7D2-1", "sequence": { "sequence": "MAKACLLQSTLLPAYSPLHKLRNQNITLSFSPLPLSRCRPGIHCSVSAGETTIQSMEEAPKISWGCEIDSLENATSLQNWLSDSGLPPQKMAIDRVDIGERGLVASQNLRKGEKLLFVPPSLVISADSEWTNAEAGEVMKRYDVPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYLEASQIRERAIERITNVVGTYEDLRSRIFSKHPQLFPKEVFNDETFKWSFGILFSRLVRLPSMDGRFALVPWADMLNHNCEVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGNKSNGELLLSYGFVPREGTNPSDSVELALSLRKNDKCYEEKLDALKKHGLSTPQCFPVRITGWPMELMAYAYLVVSPPDMRNNFEEMAKAASNKTSTKNDLKYPEIEEDALQFILDSCETSISKYSRFLKESGSMDLDITSPKQLNRKAFLKQLAVDLSTSERRILYRAQYILRRRLRDIRSGELKALRLFSGLRNFFK", "length": 504, "header": "tr|Q9S7D2-1|Q9S7D2_ARATH Isoform 1 of Rubisco methyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7D2-1" }, "locus": { "chromosome": "3", "start_pos": 2451564, "end_pos": 2455082, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07670.1", "url": "https://www.ensemblgenomes.org/id/AT3G07670.1" }, { "database": "Ensembl Peptide", "id": "AT3G07670.1", "url": "https://www.ensemblgenomes.org/id/AT3G07670.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, 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Cell. 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effector family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190513" }, "gene_names": [], "protein_names": [ { "name": "F-box associated ubiquitination effector family protein", "type": "synonym", "evidence": [ { "id": "NP_190513", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190513" }, { "id": "Q9S7F8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7F8", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8", "locus": {} } ], "crossref": [ { "id": "AT3G49440", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G49440", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824106", "url": "https://www.ncbi.nlm.nih.gov/gene/824106", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49440", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49440", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ANTRLNI", "url": "https://omabrowser.org/oma/group/ANTRLNI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190513", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49440", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49440", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S7F8", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7F8-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEENYYGEFVDCSIPHTPKCVGICINGHLYYKAMGNEYQLMIVRFDIRSEKFKFTTINNYEAVQIQFLLRTLIDYKVKLGALITDLDGMFSRATTCIEFWVLDDVEEHKWWRHYIPPLWESLVENYWLVIVRMTRNGEIVLTSLELYDPFYTFCYNMKRKTITRIKIQGMEAFKGRNIFTFTDHIEDVRLMEAIMATKAG", "length": 200, "header": "tr|Q9S7F8-1|Q9S7F8_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S7F8-1" }, "isoforms": [ { "isoform_ac": "Q9S7F8-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8/entry#Q9S7F8-1", "sequence": { "sequence": "MEENYYGEFVDCSIPHTPKCVGICINGHLYYKAMGNEYQLMIVRFDIRSEKFKFTTINNYEAVQIQFLLRTLIDYKVKLGALITDLDGMFSRATTCIEFWVLDDVEEHKWWRHYIPPLWESLVENYWLVIVRMTRNGEIVLTSLELYDPFYTFCYNMKRKTITRIKIQGMEAFKGRNIFTFTDHIEDVRLMEAIMATKAG", "length": 200, "header": "tr|Q9S7F8-1|Q9S7F8_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S7F8-1" }, "locus": { "chromosome": "3", "start_pos": 18335715, "end_pos": 18336317, 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Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7F8", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7F8", "url": "https://www.uniprot.org/uniprotkb/Q9S7F8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], 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"https://www.ensemblgenomes.org/id/AT3G01750.1" }, { "database": "Ensembl Peptide", "id": "AT3G01750.1", "url": "https://www.ensemblgenomes.org/id/AT3G01750.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 430, "end_pos": 430, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S7I4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7I4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser430" }, { "start_pos": 563, "end_pos": 563, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S7I4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7I4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser563" }, { "start_pos": 566, 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C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I4", "url": "https://www.uniprot.org/uniprotkb/Q9S7I4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9S7I4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7I4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9S7I4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7I4" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", 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Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I7", "url": "https://www.uniprot.org/uniprotkb/Q9S7I7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, 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"https://www.uniprot.org/uniprotkb/Q9S7L6/entry#Q9S7L6-1", "sequence": { "sequence": "MEAYREEALRVKQIAERRFAEKDFTSARSYALKAKSLFPDLEGLSQMVATFEVYLASQTRSGGQIDYYAVLGLKPSAGKREVKKQYKKMAVLLHPDKNKCIGADGAFHLISEAWSFLSNEFNKSTFYYKRKKHIDSTEVQKHSTEYMPGTGTGTGTAVFDRFPPSSERLDTFWTVCTSCKVQYEYLRKYVNKRLSCKNCRGAFIAVETGPAPVSAPFHYTPPSHAPPSHAPPSHAPPSNGYGAHGYDAMSRMPTNSTYFLGHYPGQGHGYDYSTNGSYEWSSYSGTTTSPGNLDLKRVSSVSNGYPYKHSNSVVSGGINKVKDGSNGTCSKKSTPGGLIYPNQISMSAHASANKVGRPGKKSKVFMEAAANGFVENPLRSVSVSKTANTDAKMDQDYKLHIQSSTRRWSAASVLDTRKPLIQKARTDIKQRLEMMRLALEAAAAAEDATPLDEKTVLSCKLGDVTGRKTNGPITVPDSDFHDFDKNRSEESFEPRQIWAIYDEDDGMPRLYCVVREVLSVQPFKIDIAYLSSKTDIEFGSMKWVQYGFTKSCGHFRIRNSDIVDHVNIFSHLLKGKKTGRGGCVRIFPTAGEIWAVYKNWSLNWDGSTPDEVRHQYEMVEILDEYTEQYGVCVTPLVKLEGYKTVYHRSTREDSKKWIPRCEMLRFSHQVPSWFLKDATSGFPENCWDLDPAAIPEELLHIGAGTN", "length": 706, "header": "tr|Q9S7L6-1|Q9S7L6_ARATH Isoform 1 of DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7L6-1" }, "locus": { "chromosome": "2", "start_pos": 1913291, "end_pos": 1916657, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05250.1", "url": "https://www.ensemblgenomes.org/id/AT2G05250.1" }, { "database": "Ensembl Peptide", "id": "AT2G05250.1", "url": "https://www.ensemblgenomes.org/id/AT2G05250.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 474, "start_aa": "Thr", "end_pos": 474, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr474", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 589, "start_aa": "Thr", "end_pos": 589, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr589", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 300, "end_pos": 300, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S7L6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7L6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser300" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9S7L6", "url": "https://www.uniprot.org/uniprotkb/Q9S7L6" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9S7L6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7L6" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7L6", "url": "https://www.uniprot.org/uniprotkb/Q9S7L6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G05230", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05230", "resource": "KEGG Pathway" }, { "id": "ath:AT2G05250", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05250", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9S7L6", "url": "https://www.uniprot.org/uniprotkb/Q9S7L6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 275, "end_pos": 277, "annotation": "n_glycosylation_sequon" }, { "start_pos": 326, "end_pos": 328, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" }, { "start_pos": 599, "end_pos": 601, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S7L6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7L6" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 66, "end_pos": 138, "start_aa": "Asp", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 474, 589 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 300 ], "sequon_annotation_sites": [ { "start_pos": 122, "end_pos": 124 }, { "start_pos": 255, "end_pos": 257 }, { "start_pos": 275, "end_pos": 277 }, { "start_pos": 326, "end_pos": 328 }, { "start_pos": 486, "end_pos": 488 }, { "start_pos": 599, "end_pos": 601 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 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"evidence": [ { "id": "NP_001319445", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319445" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7L7", "url": "https://www.uniprot.org/uniprotkb/Q9S7L7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7L7", "locus": {} } ], "crossref": [ { "id": "28718530", "url": "https://www.ncbi.nlm.nih.gov/gene/28718530", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G01940", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01940", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEGADWG", "url": "https://omabrowser.org/oma/group/MEGADWG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33128", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33128", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33128:SF83", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33128:SF83", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11820", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11820", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001319445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319445", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G01940", "url": 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"Organism-specific" ] }, { "id": "Q9S7Q5", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7Q5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQLLYETYLKFLLFFVFLFVKQLSWAETGTNPLTNISYVNSLGYPFKYPYLSSNGLPVETSFKFPSPLPSMPSDGGNFGKRSIDMGGLEVTQISISNSTSHRVWRTYEGGPDNMGVSIFEPTTIPRNFFKLGFYAQPNNRQLFGWILVAKDVSGSNLRPPVDYTEVGNTTTLLIKQEGPAYFWQPLCPNGYHAVGLYVTTSPMKPSLGQNSISCVRSDLTEQSEADTWVWRIKDMTISSLRPATRGVEATGVFTGTFSCKQLNFLPHPPPLFCLKNTKFDLSSMPSENQTRVLFKTYSPWIYLHPKEDFLPSSVNWVFANGALLHKKGNESIPVPIHPNGSNLPQGGCNDDLFWLDYLVDKKAREKVKRGDLESTKVYLHIKPMFGATFTDIVVWLFFPYNGNAHLKFLFIKSLSLGNIGEHVGDWEHVTLRISNFNGELWRVYFSEHSGGTLVDACDLEFMQGGNKPVVYSSLHGHAMFSKPGVVLQGGGKSGIRNDMARSDKCFDAGIGYEVIAGPGVVEPPWLNYFRKWGPRVHYRIDIFLNSVAKILPIFLRKGLRKLINKIPLEMRGQDGPTGPKVKVTWTGDEQYS", "length": 592, "header": "tr|Q9S7Q5-1|Q9S7Q5_ARATH Isoform 1 of Vacuolar sorting-associated protein (DUF946) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S7Q5-1" }, "isoforms": [ { "isoform_ac": "Q9S7Q5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5/entry#Q9S7Q5-1", "sequence": { "sequence": "MQLLYETYLKFLLFFVFLFVKQLSWAETGTNPLTNISYVNSLGYPFKYPYLSSNGLPVETSFKFPSPLPSMPSDGGNFGKRSIDMGGLEVTQISISNSTSHRVWRTYEGGPDNMGVSIFEPTTIPRNFFKLGFYAQPNNRQLFGWILVAKDVSGSNLRPPVDYTEVGNTTTLLIKQEGPAYFWQPLCPNGYHAVGLYVTTSPMKPSLGQNSISCVRSDLTEQSEADTWVWRIKDMTISSLRPATRGVEATGVFTGTFSCKQLNFLPHPPPLFCLKNTKFDLSSMPSENQTRVLFKTYSPWIYLHPKEDFLPSSVNWVFANGALLHKKGNESIPVPIHPNGSNLPQGGCNDDLFWLDYLVDKKAREKVKRGDLESTKVYLHIKPMFGATFTDIVVWLFFPYNGNAHLKFLFIKSLSLGNIGEHVGDWEHVTLRISNFNGELWRVYFSEHSGGTLVDACDLEFMQGGNKPVVYSSLHGHAMFSKPGVVLQGGGKSGIRNDMARSDKCFDAGIGYEVIAGPGVVEPPWLNYFRKWGPRVHYRIDIFLNSVAKILPIFLRKGLRKLINKIPLEMRGQDGPTGPKVKVTWTGDEQYS", "length": 592, "header": "tr|Q9S7Q5-1|Q9S7Q5_ARATH Isoform 1 of Vacuolar sorting-associated protein (DUF946) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S7Q5-1" }, "locus": { "chromosome": "3", "start_pos": 307782, "end_pos": 309560, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01880.1", "url": "https://www.ensemblgenomes.org/id/AT3G01880.1" }, { "database": "Ensembl Peptide", "id": "AT3G01880.1", "url": "https://www.ensemblgenomes.org/id/AT3G01880.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7Q5", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7Q5", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01880", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01880", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9S7Q5", "url": "https://www.uniprot.org/uniprotkb/Q9S7Q5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 288, "end_pos": 290, "annotation": "n_glycosylation_sequon" }, { "start_pos": 329, "end_pos": 331, "annotation": "n_glycosylation_sequon" }, { "start_pos": 339, "end_pos": 341, "annotation": "n_glycosylation_sequon" }, { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" }, { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 168, "end_pos": 170 }, { "start_pos": 288, "end_pos": 290 }, { "start_pos": 329, "end_pos": 331 }, { "start_pos": 339, "end_pos": 341 }, { "start_pos": 35, "end_pos": 37 }, { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9S7R2-1", "uniprot_ac": "Q9S7R2", "uniprot_id": "Q9S7R2_ARATH", "mass": { "chemical_mass": 63517.0, "monoisotopic_mass": 63517.0 }, "refseq": { "ac": "NP_566157", "name": "Major facilitator superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566157" }, "gene_names": [ { "name": "F28J7.26", "type": "synonym", "evidence": [ { "id": "NP_566157", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566157" }, { "id": "Q9S7R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" } ] } ], "protein_names": [ { "name": "Major facilitator superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_566157", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566157" }, { "id": "Q9S7R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7R2", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2", "locus": {} } ], "crossref": [ { "id": "AT3G01930", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G01930", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd17354", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17354", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "821218", "url": "https://www.ncbi.nlm.nih.gov/gene/821218", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010658", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010658", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056555", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056555", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G01930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SGHDQEI", "url": "https://omabrowser.org/oma/group/SGHDQEI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LQZ4", "url": "https://www.orthodb.org/?gene=A0A1I9LQZ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F4JD50", "url": "https://www.orthodb.org/?gene=F4JD50", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9S7R2", "url": "https://www.orthodb.org/?gene=Q9S7R2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576:SF73", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576:SF73", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06813", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566157", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566157", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G01930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G01930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQZ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQZ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQZ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JD50", "url": "https://www.uniprot.org/uniprotkb/F4JD50", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JD50-1", "url": "https://www.uniprot.org/uniprotkb/F4JD50-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7R2", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7R2-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARTTRERVKSFINNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQLSRLGVAKDLGDSVGFLAGTLSEILPLWAALLVGSVQNLVGYGWVWLIVTGRAPILPLWAMCILIFVGNNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAILSQVYTMIHSSDRASLIFMVAVAPSVVVVPLMFFIRPVGGHRQIRSSDATSFTVIYAVCILLAAYLMAVMLVEDFIDLSHSIIIAFTVVLFAILLVPIFIPIATSCFTASTDPCDTLEEPLLGDQQGQDPGQSTTPDHGPELIFSEVEDEKPKEVDLLPAVERHKRIAQLQAKLMQAAAEGAVRVKRRRGPHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLIASSIYDREAERQAQGSLFNPDDVLRCRGSICYFLTSLIMSGFCLIAAALSMILVQRTKPVYTNLYGKTRN", "length": 584, "header": "tr|Q9S7R2-1|Q9S7R2_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7R2-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2/entry#A0A1I9LQZ4-1", "sequence": { "sequence": "MARTTRERVKSFINNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQLSRLGVAKDLGDSVGFLAGTLSEILPLWAALLVGSVQNLVGYGWVWLIVTGRAPILPLWAMCILIFVGNNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAILSQVYTMIHSSDRASLIFMVAVAPSVVVVPLMFFIRPVGGHRQIRSSDATSFTVIYAVCILLAAYLMAVMLVEDFIDLSHSIIIAFTVVLFAILLVPIFIPIATSCFTASTDPCDTLEEPLLGDQQGQDPGQSTTPDHGPELIFSEVEDEKPKEVDLLPAVERHKRIAQLQAKLMQAAAEGAVRVKRRRGPHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRYDTVPEE", "length": 436, "header": "tr|A0A1I9LQZ4-1|A0A1I9LQZ4_ARATH Computationally mapped isoform of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7R2-1" }, "locus": { "chromosome": "3", "start_pos": 319806, "end_pos": 321663, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01930.3", "url": "https://www.ensemblgenomes.org/id/AT3G01930.3" }, { "database": "Ensembl Peptide", "id": "AT3G01930.3", "url": "https://www.ensemblgenomes.org/id/AT3G01930.3" } ] } }, { "isoform_ac": "F4JD50-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2/entry#F4JD50-1", "sequence": { "sequence": "MCILIFVGNNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAILSQVYTMIHSSDRASLIFMVAVAPSVVVVPLMFFIRPVGGHRQIRSSDATSFTVIYAVCILLAAYLMAVMLVEDFIDLSHSIIIAFTVVLFAILLVPIFIPIATSCFTASTDPCDTLEEPLLGDQQGQDPGQSTTPDHGPELIFSEVEDEKPKEVDLLPAVERHKRIAQLQAKLMQAAAEGAVRVKRRRGPHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLIASSIYDREAERQAQGSLFNPDDVLRCRGSICYFLTSLIMSGFCLIAAALSMILVQRTKPVYTNLYGKTRN", "length": 471, "header": "tr|F4JD50-1|F4JD50_ARATH Computationally mapped isoform of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7R2-1" }, "locus": { "chromosome": "3", "start_pos": 319061, "end_pos": 321663, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01930.1", "url": "https://www.ensemblgenomes.org/id/AT3G01930.1" }, { "database": "Ensembl Peptide", "id": "AT3G01930.1", "url": "https://www.ensemblgenomes.org/id/AT3G01930.1" } ] } }, { "isoform_ac": "Q9S7R2-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2/entry#Q9S7R2-1", "sequence": { "sequence": "MARTTRERVKSFINNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQLSRLGVAKDLGDSVGFLAGTLSEILPLWAALLVGSVQNLVGYGWVWLIVTGRAPILPLWAMCILIFVGNNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAILSQVYTMIHSSDRASLIFMVAVAPSVVVVPLMFFIRPVGGHRQIRSSDATSFTVIYAVCILLAAYLMAVMLVEDFIDLSHSIIIAFTVVLFAILLVPIFIPIATSCFTASTDPCDTLEEPLLGDQQGQDPGQSTTPDHGPELIFSEVEDEKPKEVDLLPAVERHKRIAQLQAKLMQAAAEGAVRVKRRRGPHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLIASSIYDREAERQAQGSLFNPDDVLRCRGSICYFLTSLIMSGFCLIAAALSMILVQRTKPVYTNLYGKTRN", "length": 584, "header": "tr|Q9S7R2-1|Q9S7R2_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7R2-1" }, "locus": { "chromosome": "3", "start_pos": 319061, "end_pos": 321690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01930.2", "url": "https://www.ensemblgenomes.org/id/AT3G01930.2" }, { "database": "Ensembl Peptide", "id": "AT3G01930.2", "url": "https://www.ensemblgenomes.org/id/AT3G01930.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7R2", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7R2", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01930", "resource": "KEGG Pathway" } ], "orthologs": [], 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"domain_list": [ { "evidence": [ { "id": "Q9S7R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" }, { "id": "PF23262", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NFD4 C-terminal", "eco_id": "ECO_0000259", "start_pos": 363, "end_pos": 575, "start_aa": "Ala", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "Q9S7R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7R2" }, { "id": "PF06813", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Nodulin-like", "eco_id": "ECO_0000259", "start_pos": 16, "end_pos": 263, "start_aa": "Arg", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"NP_001325701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325701" }, { "id": "Q9S7R9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7R9", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9", "locus": {} } ], "crossref": [ { "id": "821295", "url": "https://www.ncbi.nlm.nih.gov/gene/821295", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006565", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006565", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009072", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009072", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037818", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037818", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G02160", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G02160", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WFQEGED", "url": "https://omabrowser.org/oma/group/WFQEGED/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S7R9", "url": "https://www.orthodb.org/?gene=Q9S7R9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46338", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46338", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46338:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46338:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07524", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07524", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001325701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325701", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G02160", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G02160", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S7R9", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7R9-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLHVMLGEVVTKFLNMNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAFPETELCDRSEETNAATIEGEIPSKENGSSLPSMQLSFDGGGRLEIHKSSKDVGESTEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNHHIPILEASAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKRSMCLAKNRSFQEEGWFQEGEDKREKTSEIKEKRERIDSQLSTQM", "length": 397, "header": "tr|Q9S7R9-1|Q9S7R9_ARATH Isoform 1 of Bromodomain transcription factor OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7R9-1" }, "isoforms": [ { "isoform_ac": "Q9S7R9-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7R9/entry#Q9S7R9-1", "sequence": { "sequence": 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"title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta 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Classification" ] }, { "id": "ath:AT4G12510", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12510", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ath:AT4G12520", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12520", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MTTHAWS", "url": "https://omabrowser.org/oma/group/MTTHAWS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S7U3", "url": "https://www.orthodb.org/?gene=Q9S7U3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14547", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14547", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_567392", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567392", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G12510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT4G12520", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12520", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7U3-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKPKPKSTGSCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVCGKKVPSGFVCA", "length": 129, "header": "tr|Q9S7U3-1|Q9S7U3_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7U3-1" }, "isoforms": [ { "isoform_ac": "Q9S7U3-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3/entry#Q9S7U3-1", "sequence": { "sequence": "MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKPKPKSTGSCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVCGKKVPSGFVCA", "length": 129, "header": "tr|Q9S7U3-1|Q9S7U3_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7U3-1" }, "locus": { "chromosome": "4", "start_pos": 7417068, "end_pos": 7417873, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12510.1", "url": "https://www.ensemblgenomes.org/id/AT4G12510.1" }, { "database": "Ensembl Peptide", "id": "AT4G12510.1", "url": "https://www.ensemblgenomes.org/id/AT4G12510.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12510", "resource": "KEGG Pathway" }, { "id": "ath:AT4G12520", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12520", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U3", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S7U3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7U3" }, { "id": "SM00499", "database": "SMART", "url": 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"phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9S7V6-1", "uniprot_ac": "Q9S7V6", "uniprot_id": "Q9S7V6_ARATH", "mass": { "chemical_mass": 56811.0, "monoisotopic_mass": 56811.0 }, "refseq": { "ac": "NP_187436", "name": "DGCR14-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187436" }, 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR019148", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G07790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YKAWNTV", "url": "https://omabrowser.org/oma/group/YKAWNTV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S7V6", "url": "https://www.orthodb.org/?gene=Q9S7V6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12940", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12940", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12940:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12940:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09751", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09751", "database": "Pfam", 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"MFLSPGHSPRQISSPSPSSYSDDTLRSTPRSSSSEIIPRNPRKRMRVLDEDAYVEAIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQIRDAQLKIIERRGKKANHHVGDTEGKTQTPGSTFLRNFTPLDEFDGKTPRTPGVSGREFHGVEVDAGDGDEDIDLNLSLDEFFRRYTSEDNESFSKILEKVNRKKKEKYGFLLEGEKEDGKSIEDVKRDRITDGYGTSDQPPSTLEGWKYTAKNLLMYHPADRGEAPLTEAERAVRLLGLTKEIVKGNTRFHGKTMDSRPREDGSVEILYTPIAGSSPMHISGRDRDKSKRYDLDDLRKTPNPFYVESDKRADNGYSFVRTPSPAPGLDESPFITWGEIDGTPMRLDLEDTPIDIGGSADGPHYNIPSAPPRDVRAHSLSRDASRKLRERSNSMFKKPPLPSPHRSGSASPNVRTLSPAAQKFFRKAIAKSSSTVDESLRASYRGASPRGASPGAVTPKSVRSISRFGKDGTSSETRSP", "length": 508, "header": "tr|Q9S7V6-1|Q9S7V6_ARATH Isoform 1 of DGCR14-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7V6-1" }, "isoforms": [ { "isoform_ac": "Q9S7V6-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7V6/entry#Q9S7V6-1", "sequence": { "sequence": 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Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7V6", "url": "https://www.uniprot.org/uniprotkb/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { 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signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": 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Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a 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"title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9S7V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S7V6" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De 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complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "Q9S7V6", "url": "https://www.uniprot.org/uniprotkb/Q9S7V6" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "Q9S7V6", "url": "https://www.uniprot.org/uniprotkb/Q9S7V6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "Q9S7V6", "url": "https://www.uniprot.org/uniprotkb/Q9S7V6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 486 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 13, 14, 16, 19, 21, 118, 121, 122, 128, 137, 140, 329, 431, 444, 481, 486, 507 ], "sequon_annotation_sites": [ { "start_pos": 126, "end_pos": 128 }, { "start_pos": 165, "end_pos": 167 }, { "start_pos": 180, "end_pos": 182 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 17 }, { "field": "total_sites", "count": 17 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9S7X5-1", "uniprot_ac": "Q9S7X5", "uniprot_id": "Q9S7X5_ARATH", "mass": { "chemical_mass": 55319.0, "monoisotopic_mass": 55319.0 }, "refseq": { "ac": "NP_001319496", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319496" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9S7X5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001319496", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319496" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7X5", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5", "locus": {} } ], "crossref": [ { "id": "AT3G07730", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G07730", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819964", "url": "https://www.ncbi.nlm.nih.gov/gene/819964", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G07730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RMSETLW", "url": "https://omabrowser.org/oma/group/RMSETLW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34194", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34194", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34194:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34194:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001319496", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319496", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LMC1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LMC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7X5", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S7X5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKKKAIVIDDGYTRFMVNEMSEKIDVPIICLDEDDDDDDLMVDKEYNVFLDHLRRGDKKSSSTRLEVDNGASDIRRLKIFSCDSKRSKLGNENPVKNRVNQQSKRKTVGVEVERVKIREIIQRDNRVAERRKRRIAELEAAKTSRDVPSLETQQEDIQQRDNKVRKLSESKAETLRRDDVPLVKTQEDIQRDNRVAERRKRKCDDALIKDVPLVRTEEDKRVAVEIDHVERVHRVTEVNDVDETSSRSKEVFVGRRKKNEGSEAVVDKDYMRYLTWLVDSLSDSTTEPMENLQKDDMDTLKESTMVPELDPLVEVKVEPHDDWSDYIIAMGDSPFLDGEECTPFVASKKVVDLDEGSKENESSSSWFRKELMDVLKNPYDEGEMKQLHRYVSIHKKMTRCRELRKGRGSDYETDELGQSYLESFPDFEKEYKLVVGVDKARALKLLRGFFFYLKYVSHDGVFKPWEKTQSWQP", "length": 473, "header": "tr|Q9S7X5-1|Q9S7X5_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7X5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LMC1-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5/entry#A0A1I9LMC1-1", "sequence": { "sequence": "MKKKAIVIDDGYTRFMVNEMSEKIDVPIICLDEDDDDDDLMVDKEYNVFLDHLRRGDKKSSSTRLEVDNGASDIRRLKIFSCDSKRSKLGNENPVKNRVNQQSKRKTVGVEVERVKIREIIQRDNRVAERRKRKCDDALIKDVPLVRTEEDKRVAVEIDHVERVHRVTEVNDVDETSSRSKEVFVGRRKKNEGSEAVVDKDYMRYLTWLVDSLSDSTTEPMENLQKDDMDTLKESTMVPELDPLVEVKVEPHDDWSDYIIAMGDSPFLDGEECTPFVASKKVVDLDEGSKENESSSSWFRKELMDVLKNPYDEGEMKQLHRYVSIHKKMTRCRELRKGRGSDYETDELGQSYLESFPDFEKEYKLVVGVDKARALKLLRGFFFYLKYVSHDGVFKPWEKTQSWQP", "length": 405, "header": "tr|A0A1I9LMC1-1|A0A1I9LMC1_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7X5-1" }, "locus": { "chromosome": "3", "start_pos": 2467931, "end_pos": 2469622, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07730.2", "url": "https://www.ensemblgenomes.org/id/AT3G07730.2" }, { "database": "Ensembl Peptide", "id": "AT3G07730.2", "url": "https://www.ensemblgenomes.org/id/AT3G07730.2" } ] } }, { "isoform_ac": "Q9S7X5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5/entry#Q9S7X5-1", "sequence": { "sequence": "MKKKAIVIDDGYTRFMVNEMSEKIDVPIICLDEDDDDDDLMVDKEYNVFLDHLRRGDKKSSSTRLEVDNGASDIRRLKIFSCDSKRSKLGNENPVKNRVNQQSKRKTVGVEVERVKIREIIQRDNRVAERRKRRIAELEAAKTSRDVPSLETQQEDIQQRDNKVRKLSESKAETLRRDDVPLVKTQEDIQRDNRVAERRKRKCDDALIKDVPLVRTEEDKRVAVEIDHVERVHRVTEVNDVDETSSRSKEVFVGRRKKNEGSEAVVDKDYMRYLTWLVDSLSDSTTEPMENLQKDDMDTLKESTMVPELDPLVEVKVEPHDDWSDYIIAMGDSPFLDGEECTPFVASKKVVDLDEGSKENESSSSWFRKELMDVLKNPYDEGEMKQLHRYVSIHKKMTRCRELRKGRGSDYETDELGQSYLESFPDFEKEYKLVVGVDKARALKLLRGFFFYLKYVSHDGVFKPWEKTQSWQP", "length": 473, "header": "tr|Q9S7X5-1|Q9S7X5_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7X5-1" }, "locus": { "chromosome": "3", "start_pos": 2467862, "end_pos": 2469801, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07730.1", "url": "https://www.ensemblgenomes.org/id/AT3G07730.1" }, { "database": "Ensembl Peptide", "id": "AT3G07730.1", "url": "https://www.ensemblgenomes.org/id/AT3G07730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S7X5", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S7X5", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07730", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9S7X5", "url": "https://www.uniprot.org/uniprotkb/Q9S7X5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 360, "end_pos": 362, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 360, "end_pos": 362 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"MANTAAGWSPVLAPIYSPVNTKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEVVTPKQRNRSFSVFGSLADDSKLNPDEESNDSAEVASIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVEYDFRETSKDLGTDHV", "length": 170, "header": "tr|Q9S7X9-1|Q9S7X9_ARATH Isoform 1 of Zim17-type zinc finger protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9S7X9-1" }, "locus": { "chromosome": "1", "start_pos": 25810321, "end_pos": 25811180, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G68730.1", "url": "https://www.ensemblgenomes.org/id/AT1G68730.1" }, { "database": "Ensembl Peptide", "id": "AT1G68730.1", "url": "https://www.ensemblgenomes.org/id/AT1G68730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo 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"url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G27620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G27620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9S808", "url": "https://www.uniprot.org/uniprotkb/Q9S808" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "acyltransferase activity, transferring groups other than amino-acyl groups", "id": "GO:0016747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016747", "evidence": [ { "database": "UniProtKB", "id": "Q9S808", "url": "https://www.uniprot.org/uniprotkb/Q9S808" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": 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"https://www.uniprot.org/uniprotkb/Q9S828" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9S828", "locus": {} } ], "crossref": [ { "id": "820302", "url": "https://www.ncbi.nlm.nih.gov/gene/820302", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR055900", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055900", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G03930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G03930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DWIMKQW", "url": "https://omabrowser.org/oma/group/DWIMKQW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF24289", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24289", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] 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GN= PE=4 SV=1 CANONICAL=Q9S828-1" }, "isoforms": [ { "isoform_ac": "Q9S828-1", "url": "https://www.uniprot.org/uniprotkb/Q9S828/entry#Q9S828-1", "sequence": { "sequence": "MRPPISSGRIGDGGLDSCPEKKEEEKDSTSRLCSDLSDLRIERIGSTPAFQWISVYTKRPPMKQRFHHNIANSRLSHHAEKGKRDGLFISCVASEANLWALVMDAGTGFTSQVYKFSSTFLPKDWIMKQWEKNYYISSIAGANNGSSLVVMSKGTRYIQQSYKTGDSIPLKWMDKKWKEGFHVTSMTTGGSRWGVVMSRNSGFSEQVMEVDFLNPSEDINRRLESGYMITSMAATADQAALILSIPRRKITDEIQETLRTSSFPSSYVKDKWGKNMFITSICYGRTV", "length": 287, "header": "tr|Q9S828-1|Q9S828_ARATH Isoform 1 of Kinase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S828-1" }, "locus": { "chromosome": "3", "start_pos": 1011310, "end_pos": 1012810, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03930.1", "url": "https://www.ensemblgenomes.org/id/AT3G03930.1" }, { "database": "Ensembl Peptide", "id": "AT3G03930.1", "url": "https://www.ensemblgenomes.org/id/AT3G03930.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 47, "start_aa": "Thr", "end_pos": 47, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr47", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "start_pos": 134, "end_pos": 134, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S828", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S828" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Tyr134" }, { "start_pos": 135, "end_pos": 135, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S828", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S828" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Tyr135" }, { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S828", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S828" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser137" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S828", "url": "https://www.uniprot.org/uniprotkb/Q9S828" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9S828", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S828" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S828", "url": "https://www.uniprot.org/uniprotkb/Q9S828" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G03930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G03930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9S828", "url": "https://www.uniprot.org/uniprotkb/Q9S828" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "Q9S828", "url": "https://www.uniprot.org/uniprotkb/Q9S828" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S828", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S828" }, { "id": "PF24289", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24289" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF7477", "eco_id": "ECO_0000259", "start_pos": 43, "end_pos": 287, "start_aa": "Arg", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 47 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 134, 135, 137 ], "sequon_annotation_sites": [ { "start_pos": 144, "end_pos": 146 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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}, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], 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"Protein Classification" ] }, { "id": "IPR039321", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039321", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G76440", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G76440", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PGIEKNQ", "url": "https://omabrowser.org/oma/group/PGIEKNQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9S842", "url": "https://www.orthodb.org/?gene=Q9S842", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34661", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34661", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34661:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34661:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001031287", "url": 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R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9S9K1", "url": "https://www.uniprot.org/uniprotkb/Q9S9K1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S9K1", "url": "https://www.uniprot.org/uniprotkb/Q9S9K1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G65210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G65210", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 85, "end_pos": 87, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S9K1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S9K1" }, { "id": "PF14683", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14683" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rhamnogalacturonan lyase", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 242, "start_aa": "His", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 85, "end_pos": 87 } ] }, 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "Q9S9L0-1", "uniprot_ac": "Q9S9L0", "uniprot_id": "Q9S9L0_ARATH", "mass": { "chemical_mass": 65105.0, "monoisotopic_mass": 65105.0 }, "refseq": { "ac": "NP_680229", "name": "Ulp1 protease family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680229" }, "gene_names": [], "protein_names": [ { "name": "Ulp1 protease family protein", "type": "synonym", "evidence": [ { "id": "NP_680229", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680229" }, { "id": "Q9S9L0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NEIRNSC", "url": "https://omabrowser.org/oma/group/NEIRNSC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF02902", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02902", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_680229", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680229", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G28235", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G28235", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S9L0-1", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYPQWSDSAENHDTALDNLLKDIIHNRLQSHAWTHVAARRKRKQNQESSNEDGESKVIESTPADDVSHKKQRTGKAHIKVDEEEKTSLLDIWNMLEKMNVTISDMDKNASSRLDGLEKKVTCLEASVKTRFEAVETDMRVLKESQPPVVSNEAATSNNNDEYEANSNQCSWIVEEKPGSVDGLPIQRVVKKTVNSVKNKEAATKVLTKKKVAKSDKKKTIVNVEKVEKPKPEMKKTVVKVEKVDSPKPLQKKSVAAPTTKTFDDDVVDVTDKVNADNLKMASSSEETFSNPTDQMANKATADALRALQEGLDNLDGITSKRRRVPQLAGSQKYPYVGNSTVKRIITDVPSSSSVPEHLQPVSDDQFDRLKDWLEPDFEKEGLNTNNFNARFYWQIMTPRNDWPTERYGWLKDYHMGAAMSLFRRRFNRDPSKYPNQRITFLDQDLISTMLKDYKQFQPDYRCFKFREYYEDQVNGTAHCEAATNKKWFVDVDHLYAYLFVNGNHWVALDIDLTKKRVNVYDSIPSLTTDTEMAIQCMFVMTMIPAMLSSFIPSKQRRRSYSKLELLIS", "length": 568, "header": "tr|Q9S9L0-1|Q9S9L0_ARATH Isoform 1 of Ulp1 protease family protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9S9L0-1" }, "isoforms": [ { "isoform_ac": "Q9S9L0-1", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0/entry#Q9S9L0-1", "sequence": { "sequence": "MYPQWSDSAENHDTALDNLLKDIIHNRLQSHAWTHVAARRKRKQNQESSNEDGESKVIESTPADDVSHKKQRTGKAHIKVDEEEKTSLLDIWNMLEKMNVTISDMDKNASSRLDGLEKKVTCLEASVKTRFEAVETDMRVLKESQPPVVSNEAATSNNNDEYEANSNQCSWIVEEKPGSVDGLPIQRVVKKTVNSVKNKEAATKVLTKKKVAKSDKKKTIVNVEKVEKPKPEMKKTVVKVEKVDSPKPLQKKSVAAPTTKTFDDDVVDVTDKVNADNLKMASSSEETFSNPTDQMANKATADALRALQEGLDNLDGITSKRRRVPQLAGSQKYPYVGNSTVKRIITDVPSSSSVPEHLQPVSDDQFDRLKDWLEPDFEKEGLNTNNFNARFYWQIMTPRNDWPTERYGWLKDYHMGAAMSLFRRRFNRDPSKYPNQRITFLDQDLISTMLKDYKQFQPDYRCFKFREYYEDQVNGTAHCEAATNKKWFVDVDHLYAYLFVNGNHWVALDIDLTKKRVNVYDSIPSLTTDTEMAIQCMFVMTMIPAMLSSFIPSKQRRRSYSKLELLIS", "length": 568, "header": "tr|Q9S9L0-1|Q9S9L0_ARATH Isoform 1 of Ulp1 protease family protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9S9L0-1" }, "locus": { "chromosome": "5", "start_pos": 10201271, "end_pos": 10203335, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G28235.1", "url": "https://www.ensemblgenomes.org/id/AT5G28235.1" }, { "database": "Ensembl Peptide", "id": "AT5G28235.1", "url": "https://www.ensemblgenomes.org/id/AT5G28235.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 259, "end_pos": 259, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S9L0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S9L0" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Thr259" }, { "start_pos": 261, "end_pos": 261, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9S9L0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S9L0" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Thr261" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9S9L0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S9L0" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G28235", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G28235", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type peptidase activity", "id": "GO:0008234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008234", "evidence": [ { "database": "UniProtKB", "id": "Q9S9L0", "url": "https://www.uniprot.org/uniprotkb/Q9S9L0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, 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Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "Q9S9M7", "url": "https://www.uniprot.org/uniprotkb/Q9S9M7" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9S9M7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S9M7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9S9M7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9S9M7" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S9M7", "url": "https://www.uniprot.org/uniprotkb/Q9S9M7" } ], "reference": [ { "type": 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"MTMMFDLTQDLVKEILSRVPITSLGAVRSTCKGWNALSKDRILCKAKPKQQFHQGFMLSDYRLRSMRFNISGTFKENGEEFVNLSVKEIGNFLNKVEISHMYYCGGILLCVTTDTRLVIWNPYLGQIRWIQLKTETMYSTFCLRYDNNKNHKILRFLDNKQGSYEIYDLKSYSWRAFDVIPKWDIDDDGQSASVKGNTYFRTIDETPNLLICFDFTAERFGKLLDPPFQHGWMSLSWVREEKLVALYQHLDTSMIEIWITTKIEPNALSWTSFLKCYIEQLIALDFWFDIDYNNFFIDEEKKLAVVIDKVESEDCKRSNSHINSYIIGDDGYLKKMNSLGNTARSYTAIMLSSCYVSSLVQIDDPIARRRRRERNSKRKEKKRKGTTNNKV", "length": 391, "header": "sp|Q9S9T0-1|FBK80_ARATH Isoform 1 of F-box/kelch-repeat protein At4g05080 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9S9T0-1" }, "isoforms": [ { "isoform_ac": "Q9S9T0-1", "url": "https://www.uniprot.org/uniprotkb/Q9S9T0/entry#Q9S9T0-1", "sequence": { "sequence": 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L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9S9T0", "url": "https://www.uniprot.org/uniprotkb/Q9S9T0" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis 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"https://omabrowser.org/oma/group/SWWIASS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33116", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33116", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33116:SF84", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33116:SF84", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13966", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13966", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G04650", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G04650", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9S9V5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRARLDPLSRSTAHQPNALSLLGTCEPEITVYKAPEIEVKLDNFNEKTDIYSFGIVFLSLALFWI", "length": 332, "header": "tr|Q9S9V5-1|Q9S9V5_ARATH Isoform 1 of RNA-directed DNA polymerase (Reverse transcriptase)-related family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S9V5-1" }, "isoforms": [ { "isoform_ac": "Q9S9V5-1", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5/entry#Q9S9V5-1", "sequence": { "sequence": "MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRARLDPLSRSTAHQPNALSLLGTCEPEITVYKAPEIEVKLDNFNEKTDIYSFGIVFLSLALFWI", "length": 332, "header": "tr|Q9S9V5-1|Q9S9V5_ARATH Isoform 1 of RNA-directed DNA polymerase (Reverse transcriptase)-related family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9S9V5-1" }, "locus": { "chromosome": "4", "start_pos": 2353989, "end_pos": 2355213, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G04650.1", "url": "https://www.ensemblgenomes.org/id/AT4G04650.1" }, { "database": "Ensembl Peptide", "id": "AT4G04650.1", "url": "https://www.ensemblgenomes.org/id/AT4G04650.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G04650", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G04650", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA-directed DNA polymerase activity", "id": "GO:0003964", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003964", "evidence": [ { "database": "UniProtKB", "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "stromule", "id": "GO:0010319", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010319", "evidence": [ { "database": "UniProtKB", "id": "Q9S9V5", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9S9V5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S9V5" }, { "id": "PF13966", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13966" } ], "ann_type": "Domain_Extent_Annotation", 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"Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "FBL9", "url": "https://www.uniprot.org/uniprotkb/Q9S9V8", "locus": {} } ], "crossref": [ { "id": "Q9S9V8", "url": "https://alphafold.ebi.ac.uk/entry/Q9S9V8", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G05497", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G05497", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22164", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22164", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "830176", "url": "https://www.ncbi.nlm.nih.gov/gene/830176", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein 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