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RER1C", "organism": "Arabidopsis", "refseq_name": "Rer1 family protein", "refseq_ac": "NP_565550", "gene_names_uniprotkb": "ATRER1C1; RER1C; ATRER1C; T20D16.6; T20D16_6", "gene_names_refseq": "ATRER1C1; ATRER1C; T20D16.6; T20D16_6", "protein_names_uniprotkb": "Protein RER1C; AtRER1C", "protein_names_refseq": "Rer1 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G23310)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;10737146;14593172;25561503;27862469", "class_list": "", "function": "Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22177", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum;GO:0006621 protein retention in ER lumen", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9ZWI7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9ZWJ3-1", "uniprot_id": "U85A2_ARATH", "mass": 54364.0, "length": 481, "protein_name": "UDP-glycosyltransferase 85A2", "gene_name": "UGT85A2", "organism": "Arabidopsis", "refseq_name": "UDP-glucosyl transferase 85A2", "refseq_ac": "NP_173653", "gene_names_uniprotkb": "UGT85A2; AtUGT85A2; T16E15.3; UDP-glucosyl transferase 85A2", "gene_names_refseq": "AtUGT85A2; UDP-glucosyl transferase 85A2; UGT85A2", "protein_names_uniprotkb": "UDP-glycosyltransferase 85A2; 2.4.1.-", "protein_names_refseq": "UDP-glucosyl transferase 85A2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22360)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11042215;11130712;14593172;17498920;19423640;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2M0;Q8W4G1", "ec_number_list": "", "go_molecular_function": "GO:0015020 glucuronosyltransferase activity;GO:0080043 quercetin 3-O-glucosyltransferase activity;GO:0080044 quercetin 7-O-glucosyltransferase activity;GO:0035251 UDP-glucosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0010494 cytoplasmic stress granule", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9ZWJ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A0A7EPL0-1", "uniprot_id": "PIAL1_ARATH", "mass": 93475.0, "length": 847, "protein_name": "E4 SUMO-protein ligase PIAL1", "gene_name": "PIAL1", "organism": "Arabidopsis", "refseq_name": "zinc ion binding protein", "refseq_ac": "NP_172366", "gene_names_uniprotkb": "PIAL1; EMB3001; F7G19.21", "gene_names_refseq": "F7G19.21; F7G19_21; PIAL1; PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 1; embryo defective 3001", "protein_names_uniprotkb": "E4 SUMO-protein ligase PIAL1; 2.3.2.-; Protein EMBRYO DEFECTIVE 3001; Protein INHIBITOR OF ACTIVATED STAT-LIKE 1", "protein_names_refseq": "zinc ion binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08910)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;25415977;27113777;27862469", "class_list": "", "function": "Together with MOM1 and PIAL2, regulates transcriptional gene silencing (TGS) independently of changes in DNA methylation (PubMed:27113777). E4-type SUMO ligase that promotes SUMO chain formation in a SCE1-dependent manner and thus contributes to a pathway for proteolytic removal of sumoylation substrates (PubMed:25415977). Involved in stress responses (e.g. osmotic, salt and abscisic acid ABA) and sulfur metabolism (PubMed:25415977)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4HXS5;O04038", "ec_number_list": "", "go_molecular_function": "GO:0061665 SUMO ligase activity;GO:0008270 zinc ion binding;GO:0019789 SUMO transferase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0016925 protein sumoylation;GO:0060966 regulation of gene silencing by regulatory ncRNA", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A0A7EPL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFV2-1", "uniprot_id": "PQT3L_ARATH", "mass": 99083.0, "length": 892, "protein_name": "E3 ubiquitin ligase PQT3-like", "gene_name": "MQL5.29", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "MQL5.29; MQL5.29; MQL5_29", "gene_names_refseq": "", "protein_names_uniprotkb": "E3 ubiquitin ligase PQT3-like; 2.3.2.27", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47430)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10718197;11130714;14593172;18463617;19245862;19376835;19423640;20466843;21768351;22438062;23111157;23172892;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;28011693;29167316;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 23, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRK5;F4JX50;Q8L7L2;Q9FHH9", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "B9DFV2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGR6-1", "uniprot_id": "Y4291_ARATH", "mass": 101593.0, "length": 913, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g29180", "gene_name": "RHS16", "organism": "Arabidopsis", "refseq_name": "root hair specific 16", "refseq_ac": "NP_001190865", "gene_names_uniprotkb": "RHS16; F19B15.210; F19B15_210; root hair specific 16", "gene_names_refseq": "F19B15.210; F19B15_210; RHS16; root hair specific 16", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At4g29180; 2.7.11.1", "protein_names_refseq": "root hair specific 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29180)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 11, "predicted_n_glycosites": 11, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZE6", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "C0LGR6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JRB0-1", "uniprot_id": "HHO5_ARATH", "mass": 41679.0, "length": 363, "protein_name": "Transcription factor HHO5", "gene_name": "HHO5; UIF1", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": "NP_568018", "gene_names_uniprotkb": "HHO5; UIF1; C7A10.180; UIF1", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor HHO5; MYB-domain transcription factor HHO5; Protein HRS1 HOMOLOG 5; Protein ULT1 INTERACTING FACTOR 1", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37180)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;19423640;26903506;27862469;8893552;9461215", "class_list": "", "function": "Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DF77;O23168;P92984;Q08A94;Q94BW2", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0006355 regulation of DNA-templated transcription;GO:0048449 floral organ formation;GO:0090701 specification of plant organ identity", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JRB0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A178VEK7-1", "uniprot_id": "DUO1_ARATH", "mass": 34065.0, "length": 300, "protein_name": "Transcription factor DUO1", "gene_name": "DUO1", "organism": "Arabidopsis", "refseq_name": "myb-like HTH transcriptional regulator family protein", "refseq_ac": "NP_191605", "gene_names_uniprotkb": "DUO1; MYB125; T8B10.120", "gene_names_refseq": "DUO POLLEN 1; DUO1", "protein_names_uniprotkb": "Transcription factor DUO1; AtMYB125; Myb-related protein 125; Protein DUO POLLEN 1", "protein_names_refseq": "myb-like HTH transcriptional regulator family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60460)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;15239831;15618418;15694308;19300502;21285328;21441434;22608506;24876252;25057814;27624837;27862469", "class_list": "", "function": "Transcription activator that acts as a positive regulator of male germline development by promoting both gametic cell specification and cell cycle progression (PubMed:15618418, PubMed:15694308, PubMed:19300502, PubMed:21285328). Binds to canonical MYB sites 5'-AACCGTC-3', 5'-AAACCGC-3' and 5'-AACCGT-3' in promoters to trigger the expression of male germline-specific or enriched genes (e.g. MGH3, GEX2 and GCS1), including those required for fertilization (PubMed:19300502, PubMed:21285328). Required for sperm cell specification leading to pollen maturation by activating a germline-specific regulon (PubMed:15618418, PubMed:15694308, PubMed:19300502, PubMed:21285328). Involved in pollen mitosis entry at G2-M transition via the regulation of CYCB1-1, DAZ1 and DAZ2 expression (PubMed:15618418, PubMed:19300502, PubMed:24876252)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M213", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0048555 generative cell nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0044839 cell cycle G2/M phase transition;GO:0055047 generative cell mitosis;GO:0048235 pollen sperm cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A0A178VEK7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J8C6-1", "uniprot_id": "VIP1L_ARATH", "mass": 118924.0, "length": 1050, "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1", "gene_name": "ATVIP1; VIP1", "organism": "Arabidopsis", "refseq_name": "Phosphoglycerate mutase-like family protein", "refseq_ac": "NP_001030614", "gene_names_uniprotkb": "ATVIP1; VIP1; AtVIP1; QVE7; T22N4.6; T22N4_6; T4P13.1; T4P13_1; VIH2", "gene_names_refseq": "Arabidopsis homolog of yeast Vip1 1; AtVIP1; T22N4.6; T22N4_6; T4P13.1; T4P13_1", "protein_names_uniprotkb": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1; 2.7.4.24; Arabidopsis homolog protein of yeast VIP1 1; AtVIP1; Probable protein QUANTITATIVE VITAMIN E-7; Protein VIP HOMOLOG 2; VIP1 homolog protein 1", "protein_names_refseq": "Phosphoglycerate mutase-like family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01310)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "11130713;14593172;17077148;18463617;19376835;20466843;21768351;22223895;22631563;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25231822;25561503;25901085;26091701;26187819;27862469;28011693;29167316;30833711", "class_list": "", "function": "Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6) at position 1 to produce PP-InsP5 which is in turn phosphorylated by IP6Ks to produce (PP)2-InsP4. Alternatively, phosphorylates PP-InsP5 at position 1, produced by IP6Ks from InsP6, to produce (PP)2-InsP4 (PubMed:25231822). Probably involved in vitamin E homeostasis via the regulation of gamma-tocopherol biosynthesis (PubMed:17077148). Catalyzes the conversion of InsP7 to InsP8. Regulates jasmonic acid (JA) perception and plant defenses against herbivorous insects (e.g. P.rapae) and necrotrophic fungi (e.g. M.brassicae, B.cinerea and A.brassicicola) by triggering the production of jasmonate-induced pools of InsP8 and subsequent activation of SCF(COI1) E3 ubiquitin ligase complexes with JAZ proteins (e.g. TIFY10A/JAZ1) (PubMed:25901085)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WSV1;Q9MAD6;Q9SRH8", "ec_number_list": "2.7.4.24", "go_molecular_function": "GO:0000828 inositol hexakisphosphate kinase activity;GO:0000829 diphosphoinositol pentakisphosphate kinase activity;GO:0052723 inositol hexakisphosphate 1-kinase activity;GO:0033857 5-diphosphoinositol pentakisphosphate 1-kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006020 inositol metabolic process;GO:0050832 defense response to fungus;GO:0032958 inositol phosphate biosynthetic process;GO:1905036 positive regulation of antifungal innate immune response;GO:0009861 jasmonic acid and ethylene-dependent systemic resistance", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4J8C6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IHS2-1", "uniprot_id": "SYD_ARATH", "mass": 389864.0, "length": 3574, "protein_name": "Chromatin structure-remodeling complex protein SYD", "gene_name": "SYD", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_001077971", "gene_names_uniprotkb": "SYD; CHR3; SPLAYED; T3B23", "gene_names_refseq": "CHR3; CHROMATIN REMODELING COMPLEX SUBUNIT R 3; CHROMATIN REMODELING COMPLEX SUBUNIT R; SPLAYED; SYD", "protein_names_uniprotkb": "Chromatin structure-remodeling complex protein SYD; 3.6.4.-; ATP-dependent helicase SYD; Protein CHROMATIN REMODELING 3; Protein SPLAYED", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28290)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "10617197;11818058;15833920;16640604;16854978;17293567;17317660;18433157;18591352;19079584;19376835;20466843;21768351;22060019;22323601;23111157;23328941;23572148;23660473;23776212;24265739;24601666;25561503;26091701;26187819;27862469;28011693;28154133;29167316;30833711", "class_list": "", "function": "Catalytic component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. Controls stem cell fate via the transcription regulation of WUS in the shoot apical meristem, by modulating its promoter. LFY-dependent repressor of the meristem identity switch from vegetative to reproductive development probably by modulating chromatin state. Involved in the regulation of floral homeotic gene expression in response to environmental stimuli. Required for carpel and ovule development, and for cotyledon separation via the regulation of CUC2 transcription. Regulates the promoters of several genes downstream of the jasmonate (JA) and ethylene (ET) signaling pathways. Required for resistance against the necrotrophic pathogen B.cinerea but not the biotrophic pathogen P.syringae., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 7, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 7, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 7, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 39, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "F4IHS3;F4IHS4;Q5BN47;Q8L9D7;Q9AUB4;Q9SL27", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000785 chromatin", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009611 response to wounding;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 3.9, "record_id": "F4IHS2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IGZ2-1", "uniprot_id": "SMXL8_ARATH", "mass": 101611.0, "length": 910, "protein_name": "Protein SMAX1-LIKE 8", "gene_name": "SMXL8", "organism": "Arabidopsis", "refseq_name": "Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_973646", "gene_names_uniprotkb": "SMXL8; SMAX1-like 8; T07M07.2; T7M7.2; T7M7_2", "gene_names_refseq": "SMAX1-like 8; SMXL8; T7M7.2; T7M7_2", "protein_names_uniprotkb": "Protein SMAX1-LIKE 8; AtD53-like 3; AtSMXL8; Protein D53-like 3; Protein D53-like SMXL 8", "protein_names_refseq": "Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40130)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10207155;10617197;14593172;22060019;23893171;24336200;25179782;25713176;26546446;26546447;27862469", "class_list": "", "function": "Probable component of a transcriptional corepressor complex involved in branching control. Regulates cotyledon expansion and lateral root growth, but not germination or hypocotyl elongation. Promotes auxin transport and PIN1 accumulation in the stem and represses BRC1/TCP18 expression in axillary buds (PubMed:26546446, PubMed:26546447)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q940S4;Q9XEE5", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:1902347 response to strigolactone", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4IGZ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I443-1", "uniprot_id": "BARD1_ARATH", "mass": 79690.0, "length": 714, "protein_name": "BRCA1-associated RING domain protein 1", "gene_name": "BARD1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "BARD1; ATBARD1; F21M11.4; F21M11_4; ROW1", "gene_names_refseq": "", "protein_names_uniprotkb": "BRCA1-associated RING domain protein 1; AtBARD1; Protein REPRESSOR OF WUSCHEL 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04020)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;16957774;18591352;19704708;22629260;23616605;25631790;27862469", "class_list": "", "function": "Binds specifically to H3K4me3 regions of target genes (e.g. WUS and WOX5) promoters to repress their transcription via chromatin remodeling. Required for the shoot apical meristem (SAM) organization and maintenance, by confining WUS expression to the organizing center, and for the quiescent center (QC) development in the root apical meristem (RAM), by repressing WOX5 expression in the root proximal meristem (PubMed:18591352, PubMed:25631790). Plays a role in DNA repair and in cell-cycle control. Required for the repair of DNA double-strand breaks (DSBs), both natural and induced by genotoxic stress, by homologous recombination (HR) (PubMed:16957774)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B5A7D6;B5A7D7;Q9ZWC2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0070531 BRCA1-A complex;GO:0031436 BRCA1-BARD1 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I443-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HU58-1", "uniprot_id": "TAD1_ARATH", "mass": 46493.0, "length": 420, "protein_name": "tRNA-specific adenosine deaminase TAD1", "gene_name": "TAD1", "organism": "Arabidopsis", "refseq_name": "denosine deaminases acting on tRNA", "refseq_ac": "NP_001322031", "gene_names_uniprotkb": "TAD1; AtTAD1; T1N6.17; T1N6_17; ortholog of yeast Tad1", "gene_names_refseq": "AtTAD1; T1N6.17; T1N6_17; TAD1; ortholog of yeast Tad1", "protein_names_uniprotkb": "tRNA-specific adenosine deaminase TAD1; 3.5.4.34; AtTAD1; tRNA-specific adenosine-37 deaminase TAD1", "protein_names_refseq": "denosine deaminases acting on tRNA", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01760)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;17147637;23355609;25315605;27862469", "class_list": "", "function": "Involved in RNA editing. Catalyzes the specific deamination of adenosine-37 in the cytosolic tRNA-Ala. Generates inosine at the position 3'-adjacent to the anticodon tRNA-Ala., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1PFZ4;Q9LQ80", "ec_number_list": "3.5.4.34", "go_molecular_function": "GO:0008251 tRNA-specific adenosine deaminase activity;GO:0042803 protein homodimerization activity;GO:0046872 metal ion binding;GO:0003725 double-stranded RNA binding;GO:0003726 double-stranded RNA adenosine deaminase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006396 RNA processing;GO:0006400 tRNA modification;GO:0006382 adenosine to inosine editing", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4HU58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IAT2-1", "uniprot_id": "THOC2_ARATH", "mass": 207075.0, "length": 1823, "protein_name": "THO complex subunit 2", "gene_name": "THO2", "organism": "Arabidopsis", "refseq_name": "THO2", "refseq_ac": "NP_001185086", "gene_names_uniprotkb": "THO2; AtTHO2; EMB2793; EMBRYO DEFECTIVE 2793; F5A9.21; F5A9.22; F5A9_21", "gene_names_refseq": "AtTHO2; EMB2793; EMBRYO DEFECTIVE 2793; F5A9.21; F5A9_21; THO2", "protein_names_uniprotkb": "THO complex subunit 2; AtTHO2; Protein EMBRYO DEFECTIVE 2793", "protein_names_refseq": "THO2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G24706)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;14593172;17317660;18463617;19376835;20466843;20634427;20668032;21768351;22074104;23111157;23572148;23660473;23776212;24043427;25561503;26091701;27862469;29167316;29654922;30833711", "class_list": "", "function": "Acts as a component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 27, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GUG8;Q9FXJ7;Q9FXJ8", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0000347 THO complex;GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0000445 THO complex part of transcription export complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0006406 mRNA export from nucleus;GO:0008380 RNA splicing;GO:0035196 miRNA processing;GO:1990428 miRNA transport", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "F4IAT2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HU55-1", "uniprot_id": "BSK4_ARATH", "mass": 54039.0, "length": 483, "protein_name": "Serine/threonine-protein kinase BSK4", "gene_name": "BSK4", "organism": "Arabidopsis", "refseq_name": "kinase with tetratricopeptide repeat domain-containing protein", "refseq_ac": "NP_001184886", "gene_names_uniprotkb": "BSK4; T1N6.15; T1N6_15", "gene_names_refseq": "BSK4; T1N6.15; T1N6_15; brassinosteroid-signaling kinase 4", "protein_names_uniprotkb": "Serine/threonine-protein kinase BSK4; 2.7.11.1; Brassinosteroid-signaling kinase 4", "protein_names_refseq": "kinase with tetratricopeptide repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01740)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;12912986;15308754;17586839;17651370;23111157;23496207;26091701;26187819;27862469;30833711", "class_list": "", "function": "Probable serine/threonine kinase that acts as a positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1. Functions redundantly with BSK3, BSK6, BSK7 and BSK8., [UniProtKB, PubMed]; Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQ82", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4HU55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A178WF56-1", "uniprot_id": "CSTM3_ARATH", "mass": 7812.0, "length": 71, "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3", "gene_name": "ATHCYSTM3; CYSTM3", "organism": "Arabidopsis", "refseq_name": "cysteine-rich/transmembrane domain protein B", "refseq_ac": "NP_176002", "gene_names_uniprotkb": "ATHCYSTM3; CYSTM3; T6H22.17; T6H22_17", "gene_names_refseq": "T6H22.17; T6H22_17", "protein_names_uniprotkb": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3; AthCYSTM3", "protein_names_refseq": "cysteine-rich/transmembrane domain protein B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56060)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;27862469;29272523;30701352;30833711", "class_list": "", "function": "Negatively regulates salt stress responses and Na(+) homeostasis (PubMed:29272523, PubMed:30701352). Prevents Na(+) efflux, disturbs reactive oxygen species (ROS) homeostasis, and represses the expression of nuclear salt stress-responsive genes (PubMed:30701352). Involved in resistance to abiotic stress (PubMed:29272523)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8ANL9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0055078 sodium ion homeostasis;GO:1903426 regulation of reactive oxygen species biosynthetic process;GO:1901000 regulation of response to salt stress;GO:1901001 negative regulation of response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A0A178WF56-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HW04-1", "uniprot_id": "DPOE1_ARATH", "mass": 248897.0, "length": 2161, "protein_name": "DNA polymerase epsilon catalytic subunit A", "gene_name": "POL2A; TIL1", "organism": "Arabidopsis", "refseq_name": "DNA polymerase epsilon catalytic subunit", "refseq_ac": "NP_172303", "gene_names_uniprotkb": "POL2A; TIL1; ABA OVERLY SENSITIVE 4; ABO4; EARLY IN SHORT DAYS 7; EMB142; EMB2284; EMB529; EMBRYO DEFECTIVE 142; EMBRYO DEFECTIVE 2284; EMBRYO DEFECTIVE 529; ESD7; POL2A; T23G18.21; T23G18_21; TIL1; TILTED 1", "gene_names_refseq": "ABA OVERLY SENSITIVE 4; ABO4; EARLY IN SHORT DAYS 7; EMB142; EMB2284; EMB529; EMBRYO DEFECTIVE 142; EMBRYO DEFECTIVE 2284; EMBRYO DEFECTIVE 529; ESD7; POL2A; T23G18.21; T23G18_21; TIL1; TILTED 1", "protein_names_uniprotkb": "DNA polymerase epsilon catalytic subunit A; 2.7.7.7; AtPOL2a; DNA polymerase 2 a; DNA polymerase II subunit a; Protein ABA OVERLY SENSITIVE a; Protein EARLY IN SHORT DAYS 7; Protein EMBRYO DEFECTIVE 142; Protein EMBRYO DEFECTIVE 2284; Protein EMBRYO DEFECTIVE 529; Protein TILTED 1", "protein_names_refseq": "DNA polymerase epsilon catalytic subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08260)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;16212602;16278345;19244142;19947980;27862469", "class_list": "", "function": "DNA polymerase II participates in chromosomal DNA replication., [UniProtKB, UniProtKB]; DNA polymerase II, which participates in chromosomal DNA replication. Required for the timing and determination of cell fate during plant embryogenesis and root pole development, by promoting cell cycle and cell type patterning. Necessary for proper shoot (SAM) and root apical meristem (RAM) functions. Involved in maintaining epigenetic states, controlling hypersensitive response (HR), and mediating abscisic acid (ABA) signaling. Required for flowering repression through a mechanism involving epigenetic gene silencing. May participate in processes involved in chromatin-mediated cellular memory., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B3H4I0;Q9SGD5", "ec_number_list": "2.7.7.7;2.7.7.102;2.7.7.49;3.4.23.-;4.2.99.-", "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity;GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0051539 4 iron, 4 sulfur cluster binding", "go_cellular_component": "GO:0008622 epsilon DNA polymerase complex;GO:0005634 nucleus;GO:0048046 apoplast", "go_biological_process": "GO:0006272 leading strand elongation;GO:0006297 nucleotide-excision repair, DNA gap filling;GO:0006287 base-excision repair, gap-filling;GO:0045004 DNA replication proofreading;GO:0000278 mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4HW04-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HWY6-1", "uniprot_id": "MYO11_ARATH", "mass": 173610.0, "length": 1529, "protein_name": "Myosin-11", "gene_name": "XI-E; XIE", "organism": "Arabidopsis", "refseq_name": "Myosin family protein with Dil domain-containing protein", "refseq_ac": "NP_175858", "gene_names_uniprotkb": "XI-E; XIE; ATXIE; MYOSIN XI E; T22H22.1; T22H22_1; XIE", "gene_names_refseq": "ATXIE; MYOSIN XI E; T22H22.1; T22H22_1; XIE", "protein_names_uniprotkb": "Myosin-11; AtXIE; Myosin XI E", "protein_names_refseq": "Myosin family protein with Dil domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54560)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10984423;11130712;11516337;18503043;19369591;21233331;21914656;22631563;27862469", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks, mitochondria and peroxisomes., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZVN3", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0016459 myosin complex", "go_biological_process": "GO:0007015 actin filament organization;GO:0030048 actin filament-based movement;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4HWY6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J117-1", "uniprot_id": "LSF1_ARATH", "mass": 65741.0, "length": 591, "protein_name": "Phosphoglucan phosphatase LSF1, chloroplastic", "gene_name": "LSF1", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_566139", "gene_names_uniprotkb": "LSF1; F4P13.6; F4P13_6; PTPKIS2; like SEX4 1", "gene_names_refseq": "F4P13.6; F4P13_6; LSF1; like SEX4 1", "protein_names_uniprotkb": "Phosphoglucan phosphatase LSF1, chloroplastic; 3.1.3.-; Phosphoglucan phosphatase like sex Four1; Protein LIKE SEX4 1", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01510)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;17631522;20018601;25561503;27862469", "class_list": "", "function": "Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Participates in the regulation of the initial steps of starch degradation at the granule surface. May release a different set of phosphate groups from those removed by DSP4., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCU3;Q9SSA3", "ec_number_list": "", "go_molecular_function": "GO:0004721 phosphoprotein phosphatase activity;GO:0019203 carbohydrate phosphatase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009569 chloroplast starch grain;GO:0043036 starch grain", "go_biological_process": "GO:0005983 starch catabolic process;GO:0044042 glucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4J117-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IYH6-1", "uniprot_id": "AIPP2_ARATH", "mass": 108865.0, "length": 994, "protein_name": "ASI1-immunoprecipitated protein 2", "gene_name": "AIPP2", "organism": "Arabidopsis", "refseq_name": "RING/FYVE/PHD zinc finger superfamily protein", "refseq_ac": "NP_186939", "gene_names_uniprotkb": "AIPP2; F13E7.16; F13E7_16; PHD3", "gene_names_refseq": "F13E7.16; F13E7_16", "protein_names_uniprotkb": "ASI1-immunoprecipitated protein 2; PHD finger-containing protein 3", "protein_names_refseq": "RING/FYVE/PHD zinc finger superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02890)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;25561503;27862469;28011693;28808009;29654922;33277495;33433058", "class_list": "", "function": "Together with AIPP3/BDT1 and PAIPP2, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) and low-methylated H3K4 histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3 (PubMed:33277495, PubMed:33433058). CPL2 is subsequently recruited to form a BAH-PHD-CPL2 complex (BPC) in order to silence several H3K27me3 and low-methylated H3K4 enriched loci, including AGO5, via the phosphorylation state-dependent inhibition of Pol II release from the transcriptional start site (e.g. Ser5P-Pol II dephosphorylation) (PubMed:33277495). The BPC complex represses flowering by inhibiting the expression of several genes, including AGL6, FT, FUL and SOC1 (PubMed:33277495). Prevents the accumulation of intronic heterochromatin-containing genes (e.g. IBM1, At3g05410 and RPP7) (PubMed:28808009)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M8T1", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042393 histone binding;GO:0061628 histone H3K27me3 reader activity;GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic;GO:0034244 negative regulation of transcription elongation by RNA polymerase II;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4IYH6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MPR5-1", "uniprot_id": "FTSI2_ARATH", "mass": 99864.0, "length": 876, "protein_name": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic", "gene_name": "FTSHI2; MLP-300B", "organism": "Arabidopsis", "refseq_name": "AAA-type ATPase family protein", "refseq_ac": "NP_566541", "gene_names_uniprotkb": "FTSHI2; MLP-300B; ATMLP-300B; EMB2083; MEE36; MYA6.12; T2O4.19", "gene_names_refseq": "EMB2083; embryo defective 2083", "protein_names_uniprotkb": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic; AtFTSHI2; Protein EMBRYO DEFECTIVE 2083; Protein FTSH INACTIVE PROTEASE 2", "protein_names_refseq": "AAA-type ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16290)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;11130713;12185496;14993207;14996218;21286311;22121866;24964212;27862469", "class_list": "", "function": "Required for plastid development during embryogenesis (PubMed:24964212). Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (PubMed:12185496)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004176 ATP-dependent peptidase activity;GO:0016464 chloroplast protein-transporting ATPase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane;GO:0062091 Ycf2/FtsHi complex", "go_biological_process": "GO:0006508 proteolysis;GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "A8MPR5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JEP5-1", "uniprot_id": "MSH5_ARATH", "mass": 91123.0, "length": 807, "protein_name": "DNA mismatch repair protein MSH5", "gene_name": "MSH5", "organism": "Arabidopsis", "refseq_name": "MUTS-homologue 5", "refseq_ac": "NP_188683", "gene_names_uniprotkb": "MSH5; ATMSH5; MQC12.27; MUTS-HOMOLOGUE 5; MUTS-homologue 5", "gene_names_refseq": "ATMSH5; MSH5; MUTS-HOMOLOGUE 5; MUTS-homologue 5", "protein_names_uniprotkb": "DNA mismatch repair protein MSH5; AtMSH5; MutS protein homolog 5", "protein_names_refseq": "MUTS-homologue 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20475)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;11130713;18318687;18379590;18812090;21771883;27862469", "class_list": "", "function": "Involved in meiotic recombination in association with MSH4. Required for reciprocal recombination and proper segregation of homologous chromosomes at meiosis. Promotes homologous recombination through facilitating chiasma formation during prophase I. Involved in the control of class I crossovers formation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A4URL6;Q56XI7;Q6NLQ0;Q9LTP4", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0003690 double-stranded DNA binding;GO:0030983 mismatched DNA binding;GO:0140664 ATP-dependent DNA damage sensor activity", "go_cellular_component": "GO:0000794 condensed nuclear chromosome;GO:0005634 nucleus;GO:0005829 cytosol;GO:0043073 germ cell nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0045143 homologous chromosome segregation;GO:0007131 reciprocal meiotic recombination;GO:0051026 chiasma assembly;GO:0010777 meiotic mismatch repair involved in reciprocal meiotic recombination;GO:0006298 mismatch repair", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JEP5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "uniprot_id": "CNDD2_ARATH", "mass": 157118.0, "length": 1410, "protein_name": "Condensin-1 complex subunit CAP-D2", "gene_name": "CAP-D2", "organism": "Arabidopsis", "refseq_name": "binding protein", "refseq_ac": "NP_001325687", "gene_names_uniprotkb": "CAP-D2; F24I3.140", "gene_names_refseq": "", "protein_names_uniprotkb": "Condensin-1 complex subunit CAP-D2; AtCap-D2; Protein CHROMOSOME-ASSOCIATED POLYPEPTIDE D-2", "protein_names_refseq": "binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57060)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;16856987;20466843;22855829;23776212;23929493;25065716;27862469", "class_list": "", "function": "Essential protein (PubMed:23929493). Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes (By similarity). The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Required for fertility, growth and euchromatin organization, but not for sister chromatid cohesion (PubMed:23929493). Necessary to maintain normal structural integrity of the meiotic chromosomes during the two nuclear divisions of gametogenesis, especially to maintain compaction of the centromeric repeats and 45S rDNA (PubMed:25065716). Also seems to be involved in crossover formation during meiotic prophase I (PubMed:25065716). Prevents centromeric and pericentromeric heterochromatin repeats association (PubMed:23929493). Contributes to the induction of stress-responsive genes in response to stress treatment (PubMed:16856987)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4J245;Q9M1J4", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000796 condensin complex;GO:0000779 condensed chromosome, centromeric region;GO:0005694 chromosome", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0051301 cell division;GO:0007076 mitotic chromosome condensation;GO:0006325 chromatin organization;GO:0010032 meiotic chromosome condensation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A0A1I9LM04-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFG5-1", "uniprot_id": "CARK5_ARATH", "mass": 45658.0, "length": 408, "protein_name": "Protein CYTOSOLIC ABA RECEPTOR KINASE 5", "gene_name": "CARK5", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_001030893", "gene_names_uniprotkb": "CARK5; F25L23.210; MAZ; PTI13", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein CYTOSOLIC ABA RECEPTOR KINASE 5; 2.7.10.-; PTI1-3; PTI1-like tyrosine-protein kinase 3; Pto-interacting protein 1-3; RLCK CARK5; RLCK MAZZA; Receptor-like cytoplasmic kinase CARK5; Receptor-like cytoplasmic kinase MAZZA", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G59350)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130713;14593172;17040918;17317660;17644812;19376835;19423640;23111157;25561503;27862469;33909893;35388459;39673241", "class_list": "", "function": "Receptor-like cytoplasmic kinase (RLCK) that triggers abscisic acid (ABA) signaling in response to dehydration by phosphorylating and activating ABA receptors (e.g. PYL8/RCAR3, PYR1/RCAR11, PYL1/RCAR12, PYL3/RCAR13 and PYL2/RCAR14) to support their monomerization and enhance their ABA binding affinity; they in turn repress PP2C protein phosphatases acting as negative regulators of ABA responses (PubMed:35388459). Regulates many developmental processes, including stomatal patterning and spacing, as well as root development, together with CLAVATA1 family receptor-like kinases (RLKs) and via the perception of CLV3/EMBRYO SURROUNDING REGION (ESR)-related (CLE) peptides (e.g. CLV3, CLE40 and CLE45) (PubMed:33909893). Together with CARK7, negative regulator of the reactive oxygen stress (ROS) signaling mediated by the kinase OXI1 in response to pathogen-associated molecular patterns (PAMPs, e.g. flagellin), and associated with specific genes expression (PubMed:39673241)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHY7;Q940H1;Q9LX36", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.10.2;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0019901 protein kinase binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:1901653 cellular response to peptide;GO:2000037 regulation of stomatal complex patterning;GO:2000280 regulation of root development;GO:0010375 stomatal complex patterning", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "B9DFG5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JCC1-1", "uniprot_id": "PR40B_ARATH", "mass": 113569.0, "length": 992, "protein_name": "Pre-mRNA-processing protein 40B", "gene_name": "PRP40B", "organism": "Arabidopsis", "refseq_name": "pre-mRNA-processing protein 40B", "refseq_ac": "NP_001325767", "gene_names_uniprotkb": "PRP40B; ATPRP40B; MED35B; MED35_2; MMB12.15", "gene_names_refseq": "ATPRP40B; PRP40B; pre-mRNA-processing protein 40B", "protein_names_uniprotkb": "Pre-mRNA-processing protein 40B; AtPRP40b", "protein_names_refseq": "pre-mRNA-processing protein 40B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19670)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10907853;11130713;17272265;18463617;19376835;19467629;20466843;22021418;23572148;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "Binds the phosphorylated C-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries (PubMed:10907853). May be involved in pre-mRNA splicing (Probable)., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LM86;Q9LJM8", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0070063 RNA polymerase binding", "go_cellular_component": "GO:0005685 U1 snRNP;GO:0005634 nucleus;GO:0071004 U2-type prespliceosome", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0045292 mRNA cis splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4JCC1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JCU0-1", "uniprot_id": "SUA_ARATH", "mass": 112567.0, "length": 1007, "protein_name": "SUPPRESSOR OF ABI3-5", "gene_name": "SUA", "organism": "Arabidopsis", "refseq_name": "suppressor of abi3-5", "refseq_ac": "NP_001190084", "gene_names_uniprotkb": "SUA; F24B22.190; RSN1; suppressor of abi3-5", "gene_names_refseq": "SUA; suppressor of abi3-5", "protein_names_uniprotkb": "SUPPRESSOR OF ABI3-5; REQUIRED FOR SNC4-1D protein 1; Splicing factor SUA", "protein_names_refseq": "suppressor of abi3-5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54230)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;20525852;22060019;23111157;25267732;25561503;27862469;30833711", "class_list": "", "function": "Splicing factor that controls alternative splicing of the developmental regulator ABI3. Reduces splicing of a cryptic intron in ABI3, leading to a decreased in ABI3-beta transcript (PubMed:20525852). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed:25267732)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "D5L2Y2;Q8VYR8;Q9M383", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0043484 regulation of RNA splicing;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JCU0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J4C8-1", "uniprot_id": "EVN_ARATH", "mass": 63136.0, "length": 569, "protein_name": "Dolichol kinase EVAN", "gene_name": "DOK1; EVN", "organism": "Arabidopsis", "refseq_name": "phosphatidate cytidylyltransferase family protein", "refseq_ac": "NP_190090", "gene_names_uniprotkb": "DOK1; EVN; AtDOK1; F14D17.110; dolichol kinase 1", "gene_names_refseq": "AtDOK1; DOK1; dolichol kinase 1", "protein_names_uniprotkb": "Dolichol kinase EVAN; 2.7.1.108", "protein_names_refseq": "phosphatidate cytidylyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45040)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;23111157;25919390;27862469", "class_list": "", "function": "Essential for pollen development. Involved in protein N-glycosylation in the endoplasmic reticulum (ER), especially in the female gametophyte. Mediates pollen tube (PT) reception in synergids through protein glycosylation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8VXX8;Q9LXH2", "ec_number_list": "2.7.1.108", "go_molecular_function": "GO:0004168 dolichol kinase activity;GO:0016779 nucleotidyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006487 protein N-linked glycosylation;GO:0043048 dolichyl monophosphate biosynthetic process;GO:0009555 pollen development;GO:0010483 pollen tube reception", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4J4C8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JAA5-1", "uniprot_id": "SKI2_ARATH", "mass": 151184.0, "length": 1347, "protein_name": "DExH-box ATP-dependent RNA helicase DExH11", "gene_name": "SKI2", "organism": "Arabidopsis", "refseq_name": "RNA helicase, ATP-dependent, SK12/DOB1 protein", "refseq_ac": "NP_190280", "gene_names_uniprotkb": "SKI2; F13I12.10; HELPS; T6H20.10", "gene_names_refseq": "", "protein_names_uniprotkb": "DExH-box ATP-dependent RNA helicase DExH11; 3.6.4.13; AtHELPS; AtSKI2; Protein SKI2 homolog", "protein_names_refseq": "RNA helicase, ATP-dependent, SK12/DOB1 protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G46960)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;21535471;22511887;23111157;23776212;24265739;27862469;30833711", "class_list": "", "function": "Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C) (PubMed:22511887). Involved in the regulation of potassium deprivation stress response (PubMed:21535471)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SD77;Q9STG8", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0055087 Ski complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay;GO:0006351 DNA-templated transcription;GO:0006813 potassium ion transport;GO:0035864 response to potassium ion;GO:0016441 post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JAA5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGP9-1", "uniprot_id": "IMK3_ARATH", "mass": 84687.0, "length": 784, "protein_name": "Probable leucine-rich repeat receptor-like protein kinase IMK3", "gene_name": "IMK3; MRLK", "organism": "Arabidopsis", "refseq_name": "meristematic receptor-like kinase", "refseq_ac": "NP_001319765", "gene_names_uniprotkb": "IMK3; MRLK; F18O21.60; IMK3; MRLK", "gene_names_refseq": "IMK3; MRLK; meristematic receptor-like kinase", "protein_names_uniprotkb": "Probable leucine-rich repeat receptor-like protein kinase IMK3; 2.7.11.1; Protein INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 3; Protein MERISTEMATIC RECEPTOR-LIKE KINASE", "protein_names_refseq": "meristematic receptor-like kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56100)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;11910074;14593172;20064227;27862469", "class_list": "", "function": "Can phosphorylate AGL24., [UniProtKB, UniProtKB]", "predicted_glycosites": 10, "predicted_n_glycosites": 9, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "F4IY70;Q56WQ4;Q8GWS6;Q9LYN1", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGP9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1I9LMX5-1", "uniprot_id": "PCEP9_ARATH", "mass": 26206.0, "length": 243, "protein_name": "Precursor of CEP9", "gene_name": "CEP9", "organism": "Arabidopsis", "refseq_name": "DNA-directed RNA polymerase II subunit RPB1-like protein", "refseq_ac": "NP_001325993", "gene_names_uniprotkb": "CEP9; T20E23.210", "gene_names_refseq": "", "protein_names_uniprotkb": "Precursor of CEP9; PCEP9", "protein_names_refseq": "DNA-directed RNA polymerase II subunit RPB1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50610)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;17147637;24179095;24179096;25324386;27862469", "class_list": "", "function": "Extracellular signaling peptide that represses primary root growth rate and significantly inhibits lateral root formation. Modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MF19;Q9SCR4", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:1901698 response to nitrogen compound;GO:0006970 response to osmotic stress;GO:0035864 response to potassium ion;GO:0006995 cellular response to nitrogen starvation;GO:0060359 response to ammonium ion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A1I9LMX5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1I9LN01-1", "uniprot_id": "LAF3_ARATH", "mass": 63785.0, "length": 583, "protein_name": "Protein LONG AFTER FAR-RED 3", "gene_name": "LAF3", "organism": "Arabidopsis", "refseq_name": "Amidohydrolase family", "refseq_ac": "NP_001326017", "gene_names_uniprotkb": "LAF3; F27K19.30; LAF3 ISF1; LAF3 ISF2; LAF3 ISOFORM 2; LONG AFTER FAR-RED 3 ISOFORM 1; LONG AFTER FAR-RED 3", "gene_names_refseq": "LAF3 ISF1; LAF3 ISF2; LAF3 ISOFORM 2; LAF3; LONG AFTER FAR-RED 3 ISOFORM 1; LONG AFTER FAR-RED 3", "protein_names_uniprotkb": "Protein LONG AFTER FAR-RED 3; 3.5.-.-", "protein_names_refseq": "Amidohydrolase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55850)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;14645728;27862469", "class_list": "", "function": "Required for phyA-controlled responses to continuous far-red light (FRc) conditions, including the inhibition of hypocotyl elongation and the regulation of XTH15/XTR7 expression., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "F4IY42;Q7Y048;Q7Y049;Q93ZE1;Q9LY60", "ec_number_list": "", "go_molecular_function": "GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0009704 de-etiolation;GO:0009845 seed germination;GO:0010218 response to far red light", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A1I9LN01-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGP2-1", "uniprot_id": "MEE39_ARATH", "mass": 98678.0, "length": 878, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase MEE39", "gene_name": "MEE39", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_190217", "gene_names_uniprotkb": "MEE39; F18L15.50", "gene_names_refseq": "MEE39; maternal effect embryo arrest 39", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase MEE39; 2.7.11.1; Protein MATERNAL EFFECT EMBRYO ARREST 39", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G46330)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;15634699;20064227;22060019;27862469", "class_list": "", "function": "Receptor-like serine/threonine-kinase required during the endosperm development in seeds., [UniProtKB, PubMed]", "predicted_glycosites": 8, "predicted_n_glycosites": 8, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNU0;Q9SNA4", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "GO:0009793 embryo development ending in seed dormancy;GO:0009960 endosperm development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGP2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IXE7-1", "uniprot_id": "IDM1_ARATH", "mass": 131329.0, "length": 1189, "protein_name": "Increased DNA methylation 1", "gene_name": "IDM1; ROS4", "organism": "Arabidopsis", "refseq_name": "Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein", "refseq_ac": "NP_001326242", "gene_names_uniprotkb": "IDM1; ROS4; IDM1; K15M2.12; REPRESSOR OF SILENCING 4; ROS4; increased DNA methylation 1", "gene_names_refseq": "IDM1; REPRESSOR OF SILENCING 4; ROS4; increased DNA methylation 1", "protein_names_uniprotkb": "Increased DNA methylation 1; 2.3.1.-; Histone H3 acetyltransferase IDM1; Protein ROS4; Repressor of silencing 4", "protein_names_refseq": "Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14980)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10907853;11130713;22700931;22733760;24920332;25002145;25684209;27862469", "class_list": "", "function": "Histone H3 acetyltransferase that binds methylated DNA at chromatin sites lacking histone H3K4 di- or trimethylation and catalyzes H3K18 and H3K23 acetylation (PubMed:22700931, PubMed:22733760). Prevents the transcriptional silencing of transgenes and of some endogenous genes (PubMed:22700931, PubMed:22733760). Requires the presence of IDM2 for efficient H3K18 acetylation, but not for H3K23 acetylation (PubMed:25002145)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LKA7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042393 histone binding;GO:0004402 histone acetyltransferase activity;GO:0010385 double-stranded methylated DNA binding;GO:0043993 histone H3K18 acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0080188 gene silencing by siRNA-directed DNA methylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4IXE7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2RVQ5-1", "uniprot_id": "AGL16_ARATH", "mass": 27428.0, "length": 240, "protein_name": "Agamous-like MADS-box protein AGL16", "gene_name": "AGL16", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 16", "refseq_ac": "NP_001319775", "gene_names_uniprotkb": "AGL16; AGAMOUS-like 16; F28O9.80", "gene_names_refseq": "AGAMOUS-like 16; AGL16", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL16", "protein_names_refseq": "AGAMOUS-like 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57230)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11115127;11130713;12837945;12949148;15805477;17704216;18579782;20598091;24876250;27862469", "class_list": "", "function": "Probable transcription factor involved in the regulation of flowering time in long-day photoperiod. Participates in the repression of FT expression and floral transition, by interacting closely with the FLC-SVP pathways (PubMed:24876250). Functions in the satellite meristemoid lineage of stomatal development (PubMed:17704216)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XYY8;Q9FPP0;Q9M2M4", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009908 flower development;GO:0010440 stomatal lineage progression", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A2RVQ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J339-1", "uniprot_id": "RPP1_ARATH", "mass": 136132.0, "length": 1194, "protein_name": "Probable disease resistance protein RPP1", "gene_name": "RPP1", "organism": "Arabidopsis", "refseq_name": "Disease resistance protein (TIR-NBS-LRR class) family", "refseq_ac": "NP_001326419", "gene_names_uniprotkb": "RPP1; F14L2_30; cog1", "gene_names_refseq": "RPP1; cog1; recognition of peronospora parasitica 1", "protein_names_uniprotkb": "Probable disease resistance protein RPP1; 3.2.2.6; Probable NAD(+) hydrolase RPP1; Protein RECOGNITION OF PERONOSPORA PARASITICA 1", "protein_names_refseq": "Disease resistance protein (TIR-NBS-LRR class) family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44480)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;20831409;25561503;27862469;31439792;31439793", "class_list": "", "function": "TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis (By similarity). Probably acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792, PubMed:31439793)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXN9", "ec_number_list": "3.2.2.6;3.2.2.-", "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating;GO:0030275 LRR domain binding;GO:0140376 innate immune receptor activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006952 defense response;GO:0050832 defense response to fungus;GO:0002758 innate immune response-activating signaling pathway;GO:0002239 response to oomycetes;GO:0034052 positive regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4J339-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J7T2-1", "uniprot_id": "EAF1B_ARATH", "mass": 206412.0, "length": 1907, "protein_name": "Chromatin modification-related protein EAF1 B", "gene_name": "ATEAF1B; EAF1B", "organism": "Arabidopsis", "refseq_name": "Helicase/SANT-associated, DNA binding protein", "refseq_ac": "NP_189131", "gene_names_uniprotkb": "ATEAF1B; EAF1B; K7P8.16", "gene_names_refseq": "", "protein_names_uniprotkb": "Chromatin modification-related protein EAF1 B; ESA1-associated factor 1 B", "protein_names_refseq": "Helicase/SANT-associated, DNA binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24870)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11130713;18463617;20466843;23111157;23328941;25561503;27862469;28011693;29654922;30833711", "class_list": "", "function": "Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9LRX4", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0010485 histone H4 acetyltransferase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0035267 NuA4 histone acetyltransferase complex;GO:0048046 apoplast", "go_biological_process": "GO:2000028 regulation of photoperiodism, flowering;GO:0009909 regulation of flower development;GO:0048510 regulation of timing of transition from vegetative to reproductive phase;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4J7T2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1I9LQ53-1", "uniprot_id": "A0A1I9LQ53_ARATH", "mass": 74156.0, "length": 672, "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_001326721", "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "Leucine-rich repeat protein kinase family protein", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50230)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130713;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A1I9LQ53-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFA8-1", "uniprot_id": "INVC_ARATH", "mass": 74722.0, "length": 664, "protein_name": "Alkaline/neutral invertase C, mitochondrial", "gene_name": "INVC; N-INVC", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "INVC; N-INVC; F5E6.17; F5E6_17; N-InvC; neutral invertase C", "gene_names_refseq": "", "protein_names_uniprotkb": "Alkaline/neutral invertase C, mitochondrial; 3.2.1.26; A/N-INVC", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06500)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;19423640;21441406;22060019;23135328;27862469", "class_list": "", "function": "Invertase that cleaves sucrose into glucose and fructose., [UniProtKB, UniProtKB]; Mitochondrial invertase that cleaves sucrose into glucose and fructose and is involved in the regulation of aerial tissue development and floral transition. May be modulating hormone balance in relation to the radicle emergence., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWN9;Q7Y209;Q9C8Z1", "ec_number_list": "", "go_molecular_function": "GO:0004575 sucrose alpha-glucosidase activity;GO:0033926 endo-alpha-N-acetylgalactosaminidase activity;GO:0004564 beta-fructofuranosidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion", "go_biological_process": "GO:0007623 circadian rhythm;GO:0005987 sucrose catabolic process;GO:0010029 regulation of seed germination;GO:0048510 regulation of timing of transition from vegetative to reproductive phase;GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "B9DFA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1YKT1-1", "uniprot_id": "TCP18_ARATH", "mass": 49676.0, "length": 433, "protein_name": "Transcription factor TCP18", "gene_name": "BRC1; TCP18", "organism": "Arabidopsis", "refseq_name": "TCP family transcription factor", "refseq_ac": "NP_001118656", "gene_names_uniprotkb": "BRC1; TCP18; ATTCP18; AtBRC1; BRANCHED 1; BRC1; K24M9.4; TBL1; TCP18", "gene_names_refseq": "ATTCP18; AtBRC1; BRANCHED 1; BRC1; TCP18", "protein_names_uniprotkb": "Transcription factor TCP18; Protein BRANCHED 1; Protein TEOSINTE BRANCHED 1-LIKE 1", "protein_names_refseq": "TCP family transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18550)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;11130713;17307924;17452340;27862469;30865619", "class_list": "", "function": "Transcription factor that prevents axillary bud outgrowth and delays early axillary bud development (PubMed:17307924, PubMed:17452340, PubMed:30865619). Indirectly required for the auxin-induced control of apical dominance (PubMed:17307924, PubMed:17452340)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AQW3;Q9LII4", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010075 regulation of meristem growth;GO:0010223 secondary shoot formation;GO:2000032 regulation of secondary shoot formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A1YKT1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J8D3-1", "uniprot_id": "TPLAT_ARATH", "mass": 130908.0, "length": 1176, "protein_name": "Protein TPLATE", "gene_name": "TPLATE", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": "NP_186827", "gene_names_uniprotkb": "TPLATE; F28J7.11; F28J7_11; F4P13.33; T22", "gene_names_refseq": "F28J7.11; F28J7_11; TPLATE", "protein_names_uniprotkb": "Protein TPLATE", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01780)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130713;14593172;15469496;17189342;17317660;19245862;19376835;21187379;21768351;22074104;23111157;23572148;23660473;23776212;24601666;25561503;26091701;27419465;27862469;29167316", "class_list": "", "function": "Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84W49;Q9S7T0", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006897 endocytosis;GO:0000911 cytokinesis by cell plate formation;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "F4J8D3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I8I0-1", "uniprot_id": "SUN4_ARATH", "mass": 67272.0, "length": 596, "protein_name": "SUN domain-containing protein 4", "gene_name": "SUN4", "organism": "Arabidopsis", "refseq_name": "Galactose-binding protein", "refseq_ac": "NP_177292", "gene_names_uniprotkb": "SUN4; AtSUN4; F26A9.26; F26A9_26; SUN-domain protein 4", "gene_names_refseq": "AtSUN4; F26A9.26; F26A9_26; SUN-domain protein 4; SUN4", "protein_names_uniprotkb": "SUN domain-containing protein 4; AtSUN4", "protein_names_refseq": "Galactose-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71360)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;25217773;25561503;25740919;27862469", "class_list": "", "function": "Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. [TAIR]., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WQI7;Q9C9H3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006997 nucleus organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4I8I0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0SUT9-1", "uniprot_id": "JMJ16_ARATH", "mass": 134993.0, "length": 1209, "protein_name": "Putative lysine-specific demethylase JMJ16", "gene_name": "JMJ16; PKDM7D", "organism": "Arabidopsis", "refseq_name": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "refseq_ac": "NP_001184940", "gene_names_uniprotkb": "JMJ16; PKDM7D; F22O13.10; F22O13_10; PKDM7D", "gene_names_refseq": "F22O13.10; F22O13_10; PKDM7D", "protein_names_uniprotkb": "Putative lysine-specific demethylase JMJ16; 1.14.11.-; AtJMJ16; Jumonji domain-containing protein 16; Lysine-specific histone demethylase JMJ16; Protein JUMONJI 16; [histone H3]-trimethyl-L-lysine(4) monodemethylase JMJ16", "protein_names_refseq": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08620)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;18713399;20202164;22074104;27862469;30712008;31038749;32572214", "class_list": "", "function": "Functions as a histone H3 'Lys-4' (H3K4me) demethylase involved in the negative regulation of gene expression (PubMed:30712008, PubMed:32572214). Active on H3K4me1, H3K4me2 and H3K4me3 (PubMed:30712008, PubMed:32572214). Not active on mono-, di- and trimethylated H3K9, H3K27 and H3K36 in somatic cells (PubMed:30712008, PubMed:32572214). However, also active on H3K9 when in complex with MMD1, a meiocyte-specific histone reader (PubMed:32572214). Together with MMD1, promotes gene expression in male meiocytes in an H3K9me3-dependent manner, and contributes to meiotic chromosome condensation by triggering some condensin promoters (e.g. CAP-D3 and CAP-H) (PubMed:32572214). Together with JMJ14 and JMJ17, required for plant growth and development (PubMed:31038749). Represses leaf senescence in an age-dependent manner by demethylating H3K4me3 activating histone marks at senescence-associated genes (SAGs) loci, including WRKY53 and SAG201, thus preventing their premature expression (PubMed:30712008)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FRS3", "ec_number_list": "1.14.11.-;1.14.11.67", "go_molecular_function": "GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity;GO:0008270 zinc ion binding;GO:0032183 SUMO binding;GO:0032454 histone H3K9 demethylase activity;GO:0032453 histone H3K4 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:1903409 reactive oxygen species biosynthetic process;GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "C0SUT9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H7A9-1", "uniprot_id": "PXG7_ARATH", "mass": 23851.0, "length": 210, "protein_name": "Probable peroxygenase 7", "gene_name": "PXG7", "organism": "Arabidopsis", "refseq_name": "Caleosin-related family protein", "refseq_ac": "NP_001117339", "gene_names_uniprotkb": "PXG7; CLO7; F26F24.33; F26F24.9; F26F24_33; F26F24_9", "gene_names_refseq": "F26F24.33; F26F24_33", "protein_names_uniprotkb": "Probable peroxygenase 7; 1.11.2.3; AtPXG7; Caleosin-7", "protein_names_refseq": "Caleosin-related family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23240)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11197322;11431566;24043427;27862469", "class_list": "", "function": "Probable calcium-binding peroxygenase. May be involved in pollination., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I4P7;Q8LE27;Q9LR37", "ec_number_list": "", "go_molecular_function": "GO:0016298 lipase activity;GO:0005509 calcium ion binding;GO:0004497 monooxygenase activity;GO:1990137 plant seed peroxygenase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3H7A9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVY0-1", "uniprot_id": "CER1_ARATH", "mass": 72406.0, "length": 625, "protein_name": "Very-long-chain aldehyde decarbonylase CER1", "gene_name": "CER1", "organism": "Arabidopsis", "refseq_name": "Fatty acid hydroxylase superfamily", "refseq_ac": "NP_001184890", "gene_names_uniprotkb": "CER1; CER22; ECERIFERUM 1; ECERIFERUM 22; T6A9.16; T7I23.10", "gene_names_refseq": "AT1G02200; CER1; CER22; ECERIFERUM 1; ECERIFERUM 22; POSSIBLE ALDEHYDE DECARBONYLASE; T6A9.16", "protein_names_uniprotkb": "Very-long-chain aldehyde decarbonylase CER1; 4.1.99.5; Protein ECERIFERUM 1", "protein_names_refseq": "Fatty acid hydroxylase superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02205)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;19819982;19892830;21386033;22773744;27862469;8718622;9112770", "class_list": "", "function": "Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex. Involved in epicuticular wax biosynthesis and pollen fertility., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HVX9;O22681;O23679;Q0WV76;Q39045", "ec_number_list": "4.1.99.5", "go_molecular_function": "GO:0005506 iron ion binding;GO:0016491 oxidoreductase activity;GO:0071771 aldehyde oxygenase (deformylating) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:0009611 response to wounding;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0050832 defense response to fungus;GO:0010025 wax biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4HVY0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGF5-1", "uniprot_id": "RGI5_ARATH", "mass": 116725.0, "length": 1072, "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI5", "gene_name": "RGI5", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": "NP_174673", "gene_names_uniprotkb": "RGI5; F12G12.7; F12G12_7; RGFR5", "gene_names_refseq": "F12G12.7; F12G12_7", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase RGI5; 2.7.11.1; Protein RECEPTOR OF RGF1 5; Protein RGF1 INSENSITIVE 5", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G34110)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;20064227;26091701;27229311;27229312;27862469", "class_list": "", "function": "Together with RGI1, RGI2, RGI3 and RGI4, acts as a receptor of RGF1, a peptide hormone that maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT) (PubMed:27229311, PubMed:27229312). Links RGF1 signal with its downstream components (PubMed:27229311)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 12, "predicted_n_glycosites": 12, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 12, "binding_glycan_count": 0, "secondary_ac_list": "Q9FX19", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0038023 signaling receptor activity;GO:0001653 peptide receptor activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009755 hormone-mediated signaling pathway;GO:0010074 maintenance of meristem identity;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGF5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I7Y4-1", "uniprot_id": "BSK11_ARATH", "mass": 57611.0, "length": 507, "protein_name": "Serine/threonine-protein kinase BSK11", "gene_name": "BSK11", "organism": "Arabidopsis", "refseq_name": "kinase with tetratricopeptide repeat domain-containing protein", "refseq_ac": "NP_175512", "gene_names_uniprotkb": "BSK11; F8A12.21; F8A12_21", "gene_names_refseq": "BSK11; F8A12.21; F8A12_21; brassinosteroid-signaling kinase 11", "protein_names_uniprotkb": "Serine/threonine-protein kinase BSK11; 2.7.11.1; Brassinosteroid-signaling kinase 11", "protein_names_refseq": "kinase with tetratricopeptide repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50990)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12912986;23496207;27862469", "class_list": "", "function": "Probable serine/threonine kinase that acts as a positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1., [UniProtKB, UniProtKB]; Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6I1", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4I7Y4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I240-1", "uniprot_id": "JMJ17_ARATH", "mass": 137055.0, "length": 1208, "protein_name": "Lysine-specific demethylase JMJ17", "gene_name": "JMJ17", "organism": "Arabidopsis", "refseq_name": "transcription factor jumonji (jmjC) domain-containing protein", "refseq_ac": "NP_001319304", "gene_names_uniprotkb": "JMJ17; F2K11.14; F2K11_14", "gene_names_refseq": "F2K11.14; F2K11_14", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ17; 1.14.11.67; AtJMJ17; Jumonji domain-containing protein 17; Lysine-specific histone demethylase JMJ17; Protein JUMONJI 17; [histone H3]-trimethyl-L-lysine(4) monodemethylase JMJ17", "protein_names_refseq": "transcription factor jumonji (jmjC) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63490)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;18713399;27862469;31038749", "class_list": "", "function": "Functions as a histone H3 'Lys-4' (H3K4me) demethylase involved in the regulation of gene expression (PubMed:31038749). Active on H3K4me1, H3K4me2 and H3K4me3 (PubMed:31038749). Repressor of the abscisic acid (ABA) signaling pathway, especially during stomatal closure regulation (PubMed:31038749). Negative regulator of responses to dehydration stress by binding directly to the chromatin of SRK2E/OST1 and demethylating H3K4me3 to regulates its expression (PubMed:31038749). Together with JMJ14 and JMJ16, required for plant growth and development (PubMed:31038749)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94BQ7;Q9SH34", "ec_number_list": "1.14.11.-;1.14.11.67", "go_molecular_function": "GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity;GO:0032453 histone H3K4 demethylase activity;GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:0048589 developmental growth;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4I240-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I6M1-1", "uniprot_id": "POLIA_ARATH", "mass": 117234.0, "length": 1050, "protein_name": "DNA polymerase I A, chloroplastic/mitochondrial", "gene_name": "POLGAMMA2; POLIA", "organism": "Arabidopsis", "refseq_name": "polymerase gamma 2", "refseq_ac": "NP_175498", "gene_names_uniprotkb": "POLGAMMA2; POLIA; F8A12.8; F8A12_8; PolIA; polymerase I A; polymerase gamma 2", "gene_names_refseq": "F8A12.8; F8A12_8; POLGAMMA2; PolIA; polymerase I A; polymerase gamma 2", "protein_names_uniprotkb": "DNA polymerase I A, chloroplastic/mitochondrial; 2.7.7.7; AtPolI-like A; DNA polymerase PolI-like B; POLGAMMA2; Polymerase gamma 2", "protein_names_refseq": "polymerase gamma 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50840)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12837951;14593172;15993837;16169894;21427281;23167278;27862469", "class_list": "", "function": "In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity (By similarity). Required for DNA replication and accumulation in plastids and mitochondria. May be required for DNA repair in both organelles., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W105;Q9C6J5", "ec_number_list": "2.7.7.7;2.7.7.102;2.7.7.49;3.4.23.-;4.2.99.-", "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0003677 DNA binding;GO:0008408 3'-5' exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006302 double-strand break repair;GO:0006264 mitochondrial DNA replication;GO:0033259 plastid DNA replication;GO:0006281 DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I6M1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HXP9-1", "uniprot_id": "MYO9_ARATH", "mass": 174626.0, "length": 1538, "protein_name": "Myosin-9", "gene_name": "EDR1; XI-C; XIC", "organism": "Arabidopsis", "refseq_name": "Myosin family protein with Dil domain-containing protein", "refseq_ac": "NP_172349", "gene_names_uniprotkb": "EDR1; XI-C; XIC; ATEDR1; ATXIC; ENHANCED DISEASE RESISTANCE 1; F22O13.200; F22O13.20; F22O13_200; F22O13_20; MAPKK KINASE EDR1; MYOSIN XI C; XIC", "gene_names_refseq": "ATXIC; F22O13.200; F22O13_200; MYOSIN XI C; XIC", "protein_names_uniprotkb": "Myosin-9; AtXIC; Myosin XI C", "protein_names_refseq": "Myosin family protein with Dil domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08730)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10984423;11130712;11516337;14993207;19369591;21233331;21914656;26187819;27862469", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks and mitochondria., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FRR5", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0016459 myosin complex", "go_biological_process": "GO:0007015 actin filament organization;GO:0030048 actin filament-based movement;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4HXP9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGE0-1", "uniprot_id": "Y1765_ARATH", "mass": 112902.0, "length": 1014, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07650", "gene_name": "DSI-1VOC", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat transmembrane protein kinase", "refseq_ac": "NP_172244", "gene_names_uniprotkb": "DSI-1VOC; ATDSI-1VOC; F24B9.28; F24B9.29; F24B9_29", "gene_names_refseq": "F24B9.29; F24B9_29", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At1g07650; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat transmembrane protein kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07645); (ath:AT1G07650)", "pathway_count": 2, "publication_count": 15, "publication_id_list": "11130712;14593172;19376835;20064227;21768351;23111157;23572148;23660473;23776212;24043427;25561503;26091701;27862469;28011693;29654922", "class_list": "", "function": "", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "Q94JZ3;Q9LQN8;Q9LQN9", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0033612 receptor serine/threonine kinase binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0031667 response to nutrient levels", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "C0LGE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HQM3-1", "uniprot_id": "NCER1_ARATH", "mass": 86771.0, "length": 779, "protein_name": "Neutral ceramidase 1", "gene_name": "ATNCER1; NCER1", "organism": "Arabidopsis", "refseq_name": "Neutral/alkaline non-lysosomal ceramidase", "refseq_ac": "NP_172218", "gene_names_uniprotkb": "ATNCER1; NCER1; F22G5.28; F22G5_28", "gene_names_refseq": "F22G5.28; F22G5_28", "protein_names_uniprotkb": "Neutral ceramidase 1; 3.5.1.23; Acylsphingosine deacylase 1; AtNCER1; N-CDase 1; N-acylsphingosine amidohydrolase 1; NCDase 1", "protein_names_refseq": "Neutral/alkaline non-lysosomal ceramidase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07380)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;26150824;27862469", "class_list": "", "function": "Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. Regulates sphingolipid homeostasis. Promotes oxidative stress resistance., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNV7", "ec_number_list": "3.5.1.23", "go_molecular_function": "GO:0017040 N-acylsphingosine amidohydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0046512 sphingosine biosynthetic process;GO:0046514 ceramide catabolic process;GO:0034599 cellular response to oxidative stress;GO:0042759 long-chain fatty acid biosynthetic process;GO:0090156 intracellular sphingolipid homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4HQM3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGE4-1", "uniprot_id": "Y1124_ARATH", "mass": 97022.0, "length": 882, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g12460", "gene_name": "F5O11.21; F5O11_21; T12C24.1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F5O11.21; F5O11_21; T12C24.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At1g12460; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12460)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19423640;20064227;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 11, "predicted_n_glycosites": 11, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "B9DI39;Q84WP1;Q9LN92;Q9LN98", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGE4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVW5-1", "uniprot_id": "VAD1_ARATH", "mass": 67702.0, "length": 598, "protein_name": "Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic", "gene_name": "VAD1", "organism": "Arabidopsis", "refseq_name": "GRAM domain family protein", "refseq_ac": "NP_171714", "gene_names_uniprotkb": "VAD1; T7I23.28; T7I23_28; VASCULAR ASSOCIATED DEATH1", "gene_names_refseq": "T7I23.28; T7I23_28; VAD1; VASCULAR ASSOCIATED DEATH1", "protein_names_uniprotkb": "Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic", "protein_names_refseq": "GRAM domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02120)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;15269331;17720753;19376835;21768351;23111157;23660473;25561503;27532006;27862469;28011693;29654922", "class_list": "", "function": "Involved in ethylene- and salicylic acid-dependent cell death control associated with cells in the vicinity of vascular bundles., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0043069 negative regulation of programmed cell death;GO:0009751 response to salicylic acid;GO:0009626 plant-type hypersensitive response;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4HVW5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I171-1", "uniprot_id": "MD15A_ARATH", "mass": 146345.0, "length": 1335, "protein_name": "Mediator of RNA polymerase II transcription subunit 15a", "gene_name": "MED15A; NRB4", "organism": "Arabidopsis", "refseq_name": "mediator of RNA polymerase II transcription subunit 15a-like protein", "refseq_ac": "NP_173030", "gene_names_uniprotkb": "MED15A; NRB4; F7H2.12; F7H2_12; MED15_2; Non-Recognition-of-BTH 4", "gene_names_refseq": "F7H2.12; F7H2_12; NRB4; Non-Recognition-of-BTH 4", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 15a", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 15a-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15780)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;17560376;22021418;27862469;30833711", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WT7;Q9LMQ6", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045723 positive regulation of fatty acid biosynthetic process;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4I171-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HQE2-1", "uniprot_id": "RTEL1_ARATH", "mass": 116632.0, "length": 1040, "protein_name": "Regulator of telomere elongation helicase 1 homolog", "gene_name": "RTEL1", "organism": "Arabidopsis", "refseq_name": "RAD3-like DNA-binding helicase protein", "refseq_ac": "NP_178113", "gene_names_uniprotkb": "RTEL1; F18B13.3; F18B13_3; F19K16.9", "gene_names_refseq": "F18B13.3; F18B13_3", "protein_names_uniprotkb": "Regulator of telomere elongation helicase 1 homolog; 5.6.2.-", "protein_names_refseq": "RAD3-like DNA-binding helicase protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79950)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;18463617;20466843;21081662;23660473;23776212;24043427;25516598;25561503;25595823;27760121;27862469;30833711", "class_list": "", "function": "A probable ATP-dependent DNA helicase implicated in DNA replication, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates (PubMed:25516598, PubMed:25595823). Also plays a role in preserving the stability of 45S rDNA repeats (PubMed:27760121)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9CA97;Q9SSD8", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0090657 telomeric loop disassembly;GO:1904430 negative regulation of t-circle formation;GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4HQE2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ICB6-1", "uniprot_id": "IBS1_ARATH", "mass": 79535.0, "length": 709, "protein_name": "Protein IMPAIRED IN BABA-INDUCED STERILITY 1", "gene_name": "IBS1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_001321210", "gene_names_uniprotkb": "IBS1; F6A14.22; F6A14_22", "gene_names_refseq": "F6A14.22; F6A14_22; IBS1; IMPAIRED IN BABA-INDUCED STERILITY 1", "protein_names_uniprotkb": "Protein IMPAIRED IN BABA-INDUCED STERILITY 1; 2.7.11.-", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18670)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;15308754;15722464;17317660;22209872;25561503;27862469", "class_list": "", "function": "Required for beta-aminobutyric acid (BABA)-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) via priming for salicylate (SA)-dependent defense responses such as pathogenesis-related PR-1 gene expression and trailing necrosis. Involved in BABA-mediated sterility (PubMed:15722464, PubMed:22209872). Necessary for the inheritance of BABA-priming to next generation, especially for the primed to be primed phenotype which consists in an enhanced second BABA-priming in transgenerationally primed plants (PubMed:22209872)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9T8", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity;GO:0004674 protein serine/threonine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0042742 defense response to bacterium;GO:1900426 positive regulation of defense response to bacterium;GO:0032968 positive regulation of transcription elongation by RNA polymerase II;GO:0002229 defense response to oomycetes;GO:2000031 regulation of salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4ICB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1P8AQ95-1", "uniprot_id": "STMP4_ARATH", "mass": 10464.0, "length": 97, "protein_name": "Secreted transmembrane peptide 4", "gene_name": "STMP4", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_001321237", "gene_names_uniprotkb": "STMP4; F5I14", "gene_names_refseq": "", "protein_names_uniprotkb": "Secreted transmembrane peptide 4; Phytocytokine STMP4; Precursor of secreted transmembrane peptide 4", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65486)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;27862469;31001913;34535661", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (By similarity). Prevents general growth and development (PubMed:31001913)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009751 response to salicylic acid;GO:0009723 response to ethylene;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A1P8AQ95-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2RVU1-1", "uniprot_id": "MWL1_ARATH", "mass": 19317.0, "length": 175, "protein_name": "Protein MODIFYING WALL LIGNIN-1", "gene_name": "MWL1", "organism": "Arabidopsis", "refseq_name": "chitin synthase, putative (DUF1218)", "refseq_ac": "NP_001321400", "gene_names_uniprotkb": "MWL1; F27M3.8; F27M3_8", "gene_names_refseq": "F27M3.8; F27M3_8", "protein_names_uniprotkb": "Protein MODIFYING WALL LIGNIN-1; MWL-1", "protein_names_refseq": "chitin synthase, putative (DUF1218)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31720)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;26930070;27862469", "class_list": "", "function": "Together with MWL2, contributes to secondary cell wall biology, specifically lignin biosynthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8AQR9;Q9C6W2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009507 chloroplast;GO:0012505 endomembrane system", "go_biological_process": "GO:0009808 lignin metabolic process;GO:0009809 lignin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A2RVU1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A9LNK9-1", "uniprot_id": "CPSF_ARATH", "mass": 70015.0, "length": 631, "protein_name": "30-kDa cleavage and polyadenylation specificity factor 30", "gene_name": "CPSF30", "organism": "Arabidopsis", "refseq_name": "cleavage and polyadenylation specificity factor 30", "refseq_ac": "NP_174334", "gene_names_uniprotkb": "CPSF30; ATCPSF30; F26G16.5; F26G16.6; F26G16_6; OXT6", "gene_names_refseq": "ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30; ATCPSF30; CPSF30; F26G16.6; F26G16_6; cleavage and polyadenylation specificity factor 30", "protein_names_uniprotkb": "30-kDa cleavage and polyadenylation specificity factor 30; 3.1.21.-; AtC3H11; Protein OXIDATIVE STRESS TOLERANT 6; Zinc finger CCCH domain-containing protein 11", "protein_names_refseq": "cleavage and polyadenylation specificity factor 30", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30460)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "11130712;16282318;16500995;16897494;17576667;18221561;18331819;18479511;18545667;19376835;19573236;20214900;20466843;20888817;21768351;23111157;23136375;23328941;23660473;23776212;24706550;25561503;27862469;30833711", "class_list": "", "function": "Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation. May interact with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition (By similarity). Mediates poly(A) site selection (PubMed:23136375). Binds RNA in a calcium-dependent manner (PubMed:16500995, PubMed:17576667, PubMed:20214900). Exhibits endonuclease activity with an ability to nick and degrade linear as well as circular single-stranded RNA that leaves RNA 3' ends with hydroxyl groups, thus mediating processing of the pre-mRNA as a prelude to the polyadenylation (PubMed:17576667). Involved in the post-transcriptional control, probably via poly(A) addition, of the responses of plants to stress, especially genes mediating tolerance to oxidative stress (PubMed:18545667). Plays a role in the regulation of salicylic acid (SA) production via the control of messenger RNA 3' end processing, thus being a key component of programmed cell death and plant immune responses required for resistance to virulent Pseudomonas syringae pv tomato DC3000 (Pst) (PubMed:24706550)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9Q5;Q9S9Q6", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0005516 calmodulin binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005847 mRNA cleavage and polyadenylation specificity factor complex", "go_biological_process": "GO:0006396 RNA processing;GO:0006979 response to oxidative stress;GO:0000398 mRNA splicing, via spliceosome;GO:0048024 regulation of mRNA splicing, via spliceosome;GO:0043068 positive regulation of programmed cell death", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "A9LNK9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HS99-1", "uniprot_id": "REC1_ARATH", "mass": 198774.0, "length": 1797, "protein_name": "Protein REDUCED CHLOROPLAST COVERAGE 1", "gene_name": "REC1", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": "NP_171639", "gene_names_uniprotkb": "REC1; F6F3.12; F6F3_12", "gene_names_refseq": "F6F3.12; F6F3_12", "protein_names_uniprotkb": "Protein REDUCED CHLOROPLAST COVERAGE 1", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01320)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;14593172;19376835;21768351;23172892;23660473;23776212;25561503;26862170;27862469;28011693;29167316;29654922", "class_list": "", "function": "May act as the scaffold of a protein complex, which sequesters key factors that are required for the G2 to M transition in meristematic tissues (By similarity). Together with REC2, REC3 and FMT/CLU, contributes to the establishment of the cellular volume devoted to the chloroplast compartment (PubMed:26862170)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 20, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8H2C0;Q9LNJ1", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0010906 regulation of glucose metabolic process;GO:0019750 chloroplast localization", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4HS99-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MQL1-1", "uniprot_id": "TRF1B_ARATH", "mass": 120444.0, "length": 1082, "protein_name": "TNF receptor-associated factor homolog 1b", "gene_name": "MUSE13; TRAF1B", "organism": "Arabidopsis", "refseq_name": "TRAF-like superfamily protein", "refseq_ac": "NP_001077454", "gene_names_uniprotkb": "MUSE13; TRAF1B; F19P19.26; F19P19_26; MUSE13", "gene_names_refseq": "F19P19.26; F19P19_26", "protein_names_uniprotkb": "TNF receptor-associated factor homolog 1b; Protein MUTANT SNC1-ENHANCING 13", "protein_names_refseq": "TRAF-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04300)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;22223895;23111157;23328941;25561503;26867179;27862469;28011693;28351989", "class_list": "", "function": "Functions redundantly with TRAF1A in the regulation of plant immune response. Contributes to the turnover of the nucleotide-binding domain and leucine-rich repeat-containing (NB-LRR) immune receptors SNC1 and RPS2. May associate with an E3 ubiquitin-protein ligase complex, which modulates ubiquitination and subsequent degradation of NB-LRR immune sensors to maintain their homeostasis (PubMed:26867179). Functions redundantly with TRAF1A in the regulation of autophagosome formation. Required for SINAT1- and SINAT2-mediated ubiquitination and destabilization of ATG6. Functions as a molecular adapter that helps to regulate autophagy by modulating ATG6 stability (PubMed:28351989)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I479;P93826;P93827;Q0WNI3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0045087 innate immune response;GO:1905037 autophagosome organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "A8MQL1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DGU7-1", "uniprot_id": "TPK1_ARATH", "mass": 29879.0, "length": 267, "protein_name": "Thiamine pyrophosphokinase 1", "gene_name": "TPK1", "organism": "Arabidopsis", "refseq_name": "thiamine pyrophosphokinase1", "refseq_ac": "NP_001321569", "gene_names_uniprotkb": "TPK1; F22D16.12; F22D16_12; thiamin pyrophosphokinase1", "gene_names_refseq": "F22D16.12; F22D16_12; TPK1; thiamin pyrophosphokinase1", "protein_names_uniprotkb": "Thiamine pyrophosphokinase 1; 2.7.6.2; AtTPK1; Thiamine kinase 1", "protein_names_refseq": "thiamine pyrophosphokinase1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02880)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;17611796;18463617;19423640;20466843;23111157;23572148;25561503;27862469", "class_list": "", "function": "Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP) (PubMed:17611796). TPP is an active cofactor for enzymes involved in glycolysis and energy production (PubMed:17611796). Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (PubMed:17611796)., [UniProtKB, PubMed]; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP). TPP is an active cofactor for enzymes involved in glycolysis and energy production. Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93Z45;Q9SRY1", "ec_number_list": "2.7.6.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004788 thiamine diphosphokinase activity;GO:0030975 thiamine binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0009229 thiamine diphosphate biosynthetic process;GO:0006772 thiamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B9DGU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MRD9-1", "uniprot_id": "PDS5D_ARATH", "mass": 93511.0, "length": 826, "protein_name": "Sister chromatid cohesion protein PDS5 homolog D", "gene_name": "PDS5D", "organism": "Arabidopsis", "refseq_name": "Tudor/PWWP/MBT superfamily protein", "refseq_ac": "NP_001319432", "gene_names_uniprotkb": "PDS5D; F23A5.16; F23A5_16; SL2", "gene_names_refseq": "F23A5.16; F23A5_16", "protein_names_uniprotkb": "Sister chromatid cohesion protein PDS5 homolog D; AtPDS5D; Precocious dissociation of sisters protein 5-D", "protein_names_refseq": "Tudor/PWWP/MBT superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80810)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;14593172;18463617;19376835;20466843;21768351;23111157;23660473;23776212;25561503;26648949;26826387;27862469;29654922;30833711", "class_list": "", "function": "Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8ARR1;Q9SAI0", "ec_number_list": "", "go_molecular_function": "GO:0140670 cohesin unloader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0007064 mitotic sister chromatid cohesion;GO:0035825 homologous recombination", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "A8MRD9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I460-1", "uniprot_id": "MYO8_ARATH", "mass": 169493.0, "length": 1500, "protein_name": "Myosin-8", "gene_name": "XI-B; XIB", "organism": "Arabidopsis", "refseq_name": "myosin XI B", "refseq_ac": "NP_171912", "gene_names_uniprotkb": "XI-B; XIB; ATXIB; F20D22.7; F20D22_7; MYOSIN XI B; MYOSIN XI-8; XI-8; XI-B; XIB; myosin XI B", "gene_names_refseq": "ARABIDOPSIS THALIANA MYOSIN XI B; ATXIB; F20D22.7; F20D22_7; MYOSIN XI B; MYOSIN XI-8; XI-8; XI-B; XIB; myosin XI B", "protein_names_uniprotkb": "Myosin-8; AtXIB; Myosin XI B", "protein_names_refseq": "myosin XI B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04160)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10984423;11130712;11516337;17288617;18178669;19060218;20581304;21233331;26187819;27862469;30833711", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64491", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0016459 myosin complex", "go_biological_process": "GO:0007015 actin filament organization;GO:0030048 actin filament-based movement;GO:0048767 root hair elongation", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4I460-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I907-1", "uniprot_id": "GLYR2_ARATH", "mass": 37781.0, "length": 358, "protein_name": "Glyoxylate/succinic semialdehyde reductase 2, chloroplastic", "gene_name": "GLYR2", "organism": "Arabidopsis", "refseq_name": "glyoxylate reductase 2", "refseq_ac": "NP_564030", "gene_names_uniprotkb": "GLYR2; AtGLYR2; F11A6.12; GLYOXYLATE REDUCTASE 2; GR2; glyoxylate reductase 2", "gene_names_refseq": "AtGLYR2; F11A6.12; GLYOXYLATE REDUCTASE 2; GLYR2; GR2; glyoxylate reductase 2", "protein_names_uniprotkb": "Glyoxylate/succinic semialdehyde reductase 2, chloroplastic; 1.1.1.79; 1.1.1.n11; AtGLYR2; AtGR2; SSA reductase 2", "protein_names_refseq": "glyoxylate reductase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17650)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;18495639;18495640;19453511;27862469", "class_list": "", "function": "Catalyzes the NADPH-dependent reduction of glyoxylate to glycolate as well as succinic semialdehyde (SSA) to gamma-hydroxybutyrate in vitro. May function in redox homeostasis and play a role in oxidative stress tolerance by detoxifying glyoxylate and SSA generated in glycolate metabolism and GABA metabolism, respectively., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RWF1", "ec_number_list": "1.1.1.79;1.1.1.n11;1.1.1.81", "go_molecular_function": "GO:0030267 glyoxylate reductase (NADPH) activity;GO:0051287 NAD binding;GO:0050661 NADP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4I907-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HRI2-1", "uniprot_id": "HEI10_ARATH", "mass": 34765.0, "length": 304, "protein_name": "E3 ubiquitin-protein ligase CCNB1IP1 homolog", "gene_name": "HEI10", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_175754", "gene_names_uniprotkb": "HEI10; F22G10.16; T3F20.19", "gene_names_refseq": "F22G10.16; HEI10; homolog of human HEI10 (Enhancer of cell Invasion No.10)", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase CCNB1IP1 homolog; 2.3.2.27; RING finger-containing protein HEI10; RING-type E3 ubiquitin transferase HEI10", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53490)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;22844245;27862469", "class_list": "", "function": "Ubiquitin E3 ligase required for class I crossover (CO) formation during meiosis., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8L1;Q9LPG5", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005712 chiasma;GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0007131 reciprocal meiotic recombination;GO:0051321 meiotic cell cycle;GO:0051026 chiasma assembly;GO:0035825 homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4HRI2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDQ6-1", "uniprot_id": "NIH_ARATH", "mass": 174510.0, "length": 1576, "protein_name": "DExH-box ATP-dependent RNA helicase DExH2", "gene_name": "NIH", "organism": "Arabidopsis", "refseq_name": "nuclear DEIH-boxhelicase", "refseq_ac": "NP_172152", "gene_names_uniprotkb": "NIH; DNA HELICASE; F12K11.4; F12K11_4; nuclear DEIH-boxhelicase", "gene_names_refseq": "DEIH-BOX RNA/DNA HELICASE; F12K11.4; F12K11_4; NIH; nuclear DEIH-boxhelicase", "protein_names_uniprotkb": "DExH-box ATP-dependent RNA helicase DExH2; 3.6.4.12; 3.6.4.13; DEIH-box RNA/DNA helicase", "protein_names_refseq": "nuclear DEIH-boxhelicase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06670)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10471743;11130712;20466843;24265739;27862469;30833711", "class_list": "", "function": "May function as an ATP-dependent RNA/DNA helicase. Binds DNA in vitro in a non-specific manner., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHK6;Q9SMG9", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006259 DNA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IDQ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1P8ASY1-1", "uniprot_id": "JHS1_ARATH", "mass": 147286.0, "length": 1331, "protein_name": "DNA replication ATP-dependent helicase/nuclease JHS1", "gene_name": "EMB2411; JHS1", "organism": "Arabidopsis", "refseq_name": "DNA replication helicase", "refseq_ac": "NP_001184943", "gene_names_uniprotkb": "EMB2411; JHS1; EMB2411; F7G19.26; emb2411; embryo defective 2411", "gene_names_refseq": "emb2411; embryo defective 2411", "protein_names_uniprotkb": "DNA replication ATP-dependent helicase/nuclease JHS1; DNA 5'-3' helicase JHS1; Protein EMBRYO DEFECTIVE 2411; Protein JING HE SHENG 1", "protein_names_refseq": "DNA replication helicase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08840)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;15266054;18463617;20466843;26951435;27862469", "class_list": "", "function": "Essential protein required during embryogenesis (PubMed:15266054). Key enzyme involved in DNA replication and damage repair, shoot apical meristem (SAM) maintenance, and development (PubMed:26951435). Involved in Okazaki fragments processing. Possesses different enzymatic activities, such as single-stranded DNA (ssDNA)-dependent ATPase, 5'-3' helicase and endonuclease activities. While the ATPase and endonuclease activities are well-defined and play a key role in Okazaki fragments processing and DSB repair, the 5'-3' DNA helicase activity is subject to debate. According to various reports, the helicase activity is absent to weak and its function is unclear., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]; Key enzyme involved in DNA replication and DNA repair. Involved in Okazaki fragments processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. Also involved in 5'-end resection of DNA during double-strand break (DSB) repair by mediating the cleavage of 5'-ssDNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8ASV1;F4HXR6;O04043;O04044", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0006281 DNA repair;GO:0006260 DNA replication;GO:0006974 DNA damage response;GO:0071932 replication fork reversal;GO:0010073 meristem maintenance", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A1P8ASY1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HRJ4-1", "uniprot_id": "M3K3A_ARATH", "mass": 66447.0, "length": 609, "protein_name": "Mitogen-activated protein kinase kinase kinase 3", "gene_name": "MAP3KA; MAPKKK3", "organism": "Arabidopsis", "refseq_name": "mitogen-activated protein kinase kinase kinase 3", "refseq_ac": "NP_001031181", "gene_names_uniprotkb": "MAP3KA; MAPKKK3; F22G10.18; MAP KINASE KINASE KINASE 3; MAP3KA; MAPKKK3; MEK KINASE; T3F20.12", "gene_names_refseq": "F22G10.18; MAP KINASE KINASE KINASE 3; MAP3KA; MAPKKK3; MEK KINASE; mitogen-activated protein kinase kinase kinase 3", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase kinase 3; 2.7.11.25; AtMAP3Kalpha; MAP3K alpha protein kinase", "protein_names_refseq": "mitogen-activated protein kinase kinase kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53570)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10095117;10375615;11130712;14593172;19376835;23111157;23572148;23776212;25561503;27532006;27679653;27862469;28011693", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4HRJ5;F4HRJ8;O82649;Q56ZS2;Q8W582;Q9LPH2;Q9ZRF7", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0004709 MAP kinase kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0002221 pattern recognition receptor signaling pathway;GO:0000165 MAPK cascade;GO:1900424 regulation of defense response to bacterium;GO:1900150 regulation of defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4HRJ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVA6-1", "uniprot_id": "TAF6B_ARATH", "mass": 59275.0, "length": 527, "protein_name": "Transcription initiation factor TFIID subunit 6b", "gene_name": "TAF6B", "organism": "Arabidopsis", "refseq_name": "TBP-ASSOCIATED FACTOR 6B", "refseq_ac": "NP_001031187", "gene_names_uniprotkb": "TAF6B; F20D21.18; F20D21_18; TAF6B1; TAF6B2; TAF6B3; TAF6B4; TBP-ASSOCIATED FACTOR 6B1; TBP-ASSOCIATED FACTOR 6B2; TBP-ASSOCIATED FACTOR 6B3; TBP-ASSOCIATED FACTOR 6B; TBP-associated factor 6B4", "gene_names_refseq": "F20D21.18; F20D21_18; TAF6B1; TAF6B2; TAF6B3; TAF6B4; TAF6B; TBP-ASSOCIATED FACTOR 6B1; TBP-ASSOCIATED FACTOR 6B2; TBP-ASSOCIATED FACTOR 6B3; TBP-ASSOCIATED FACTOR 6B; TBP-associated factor 6B4", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 6b; AtTAF6b; TBP-associated factor 6b", "protein_names_refseq": "TBP-ASSOCIATED FACTOR 6B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54360)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15527982;16039640;17340043;27862469", "class_list": "", "function": "TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Not redundant with TAF6., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HVA7;F4HVA8;F4HVA9;F4HVB0;Q6S7A0;Q6S7A1;Q6S7A2;Q8W4N6;Q9SLJ8", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0046982 protein heterodimerization activity;GO:0016251 RNA polymerase II general transcription initiation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005669 transcription factor TFIID complex;GO:0000124 SAGA complex;GO:0046695 SLIK (SAGA-like) complex", "go_biological_process": "GO:0051123 RNA polymerase II preinitiation complex assembly;GO:0006367 transcription initiation at RNA polymerase II promoter", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4HVA6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I893-1", "uniprot_id": "ILA_ARATH", "mass": 294075.0, "length": 2696, "protein_name": "Protein ILITYHIA", "gene_name": "ILA", "organism": "Arabidopsis", "refseq_name": "ILITYHIA", "refseq_ac": "NP_001185313", "gene_names_uniprotkb": "ILA; F13O11.10; F13O11.35; F13O11_35; ILITHYIA", "gene_names_refseq": "F13O11.35; F13O11_35; ILA; ILITHYIA", "protein_names_uniprotkb": "Protein ILITYHIA", "protein_names_refseq": "ILITYHIA", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G64790)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "11130712;17915010;18433157;18463617;18686298;19245862;19376835;20360018;20374526;20466843;21768351;21998587;23111157;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25561503;26091701;26187819;27419465;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Involved in immunity against bacterial infection and in non-host resistance (PubMed:20360018). Required for embryo development (PubMed:17915010). Required for systemic acquired resistance, but functions in an salicylic acid-independent manner (PubMed:20360018). Required for bacterium-triggered stomatal closure response (PubMed:21998587)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I894;Q9XIR5", "ec_number_list": "", "go_molecular_function": "GO:0019887 protein kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006417 regulation of translation;GO:0045087 innate immune response;GO:0042742 defense response to bacterium;GO:0034198 cellular response to amino acid starvation;GO:0009682 induced systemic resistance", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "F4I893-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I3V6-1", "uniprot_id": "SHW1_ARATH", "mass": 21367.0, "length": 192, "protein_name": "Protein SHORT HYPOCOTYL IN WHITE LIGHT 1", "gene_name": "SHW1", "organism": "Arabidopsis", "refseq_name": "short hypocotyl in white light1", "refseq_ac": "NP_564981", "gene_names_uniprotkb": "SHW1; T17F3", "gene_names_refseq": "SHORT HYPOCOTYL IN WHITE LIGHT1; SHW1", "protein_names_uniprotkb": "Protein SHORT HYPOCOTYL IN WHITE LIGHT 1", "protein_names_refseq": "short hypocotyl in white light1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69935)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;18375596;19704523;23111157;26187819;26474641;27862469", "class_list": "", "function": "Negative regulator of photomorphogenesis modulating both light and abscisic acid (ABA) signaling pathways (PubMed:18375596, PubMed:19704523, PubMed:26474641). Negatively regulates the light-mediated inhibition of hypocotyl elongation, probably in a PHYB-mediated signaling pathway, but promotes flowering time (especially in long days) and lateral root formation (PubMed:18375596, PubMed:19704523). Enhances light-regulated gene expression (PubMed:18375596). Promotes COP1-mediated degradation of HY5 during seedling development (e.g. hypocotyl growth) through enhanced ubiquitination in the darkness. Also involved in root gravitropism (PubMed:18375596, PubMed:26474641)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WTQ6;Q8LGA9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0031965 nuclear membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009642 response to light intensity;GO:0009738 abscisic acid-activated signaling pathway;GO:0009787 regulation of abscisic acid-activated signaling pathway;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4I3V6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I313-1", "uniprot_id": "SCY2A_ARATH", "mass": 100056.0, "length": 913, "protein_name": "SCY1-like protein 2 A", "gene_name": "SCYL2A", "organism": "Arabidopsis", "refseq_name": "kinase family with ARM repeat domain-containing protein", "refseq_ac": "NP_173700", "gene_names_uniprotkb": "SCYL2A; F19G10.17; F19G10_17", "gene_names_refseq": "F19G10.17; F19G10_17", "protein_names_uniprotkb": "SCY1-like protein 2 A; Inactive protein kinase SCYL2A", "protein_names_refseq": "kinase family with ARM repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22870)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;19245862;25561503;27862469;28751315", "class_list": "", "function": "Probably inactive kinase (PubMed:28751315). Component of the AP2-containing clathrin coat that regulates clathrin-dependent trafficking at plasma membrane, TGN and endosomal system (PubMed:28751315). Together with SCYL2B, required for cell growth, plant growth and development (PubMed:28751315)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23135", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0032050 clathrin heavy chain binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005737 cytoplasm;GO:0032588 trans-Golgi network membrane;GO:0031902 late endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4I313-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "uniprot_id": "MDN1_ARATH", "mass": 611889.0, "length": 5400, "protein_name": "Midasin", "gene_name": "MDN1", "organism": "Arabidopsis", "refseq_name": "midasin-like protein", "refseq_ac": "NP_001322748", "gene_names_uniprotkb": "MDN1; DSR1; F5A8.11", "gene_names_refseq": "AtMDN1; F5A8.11; F5A8_11; MDN1; MIDASIN 1", "protein_names_uniprotkb": "Midasin; AtMDN1; Dynein-related AAA-ATPase MDN1; MIDAS-containing protein 1; Protein DWARF AND SHORT ROOT 1", "protein_names_refseq": "midasin-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67120)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;18273534;18463617;20466843;23328941;23572950;23660473;23776212;25561503;27824150;27862469;29167316;30833711", "class_list": "", "function": "Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits. Functions at successive maturation steps to remove ribosomal factors at critical transition points, first driving the exit of early pre-60S particles from the nucleolus and then driving late pre-60S particles from the nucleus (By similarity). Required for female gametophyte development (PubMed:23572950). Involved in the expression regulation of genes related to plant growth and development (PubMed:27824150)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "B0FU84;F4HRR8;Q0WV24;Q9ZW94", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0009506 plasmodesma", "go_biological_process": "GO:0048638 regulation of developmental growth;GO:0000027 ribosomal large subunit assembly;GO:0009553 embryo sac development;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "A0A1P8AUY4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGG6-1", "uniprot_id": "Y5189_ARATH", "mass": 98563.0, "length": 876, "protein_name": "Probable LRR receptor-like protein kinase At1g51890", "gene_name": "T14L22.10; T14L22_10", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "T14L22.10; T14L22_10", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable LRR receptor-like protein kinase At1g51890; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51890)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;16678099;20064227;23111157;27862469", "class_list": "", "function": "", "predicted_glycosites": 20, "predicted_n_glycosites": 18, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 20, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZB0", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGG6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I096-1", "uniprot_id": "MED13_ARATH", "mass": 208462.0, "length": 1921, "protein_name": "Mediator of RNA polymerase II transcription subunit 13", "gene_name": "GCT; MED13", "organism": "Arabidopsis", "refseq_name": "RNA polymerase II transcription mediator", "refseq_ac": "NP_001185237", "gene_names_uniprotkb": "GCT; MED13; CCT; CENTER CITY; F7A10.14; GCT; GRAND CENTRAL; MAB2; MACCHI-BOU 2; MED13_1", "gene_names_refseq": "CCT; CENTER CITY; GCT; GRAND CENTRAL; MAB2; MACCHI-BOU 2", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 13; Protein GRAND CENTRAL; Protein MACCHI-BOU 2", "protein_names_refseq": "RNA polymerase II transcription mediator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55325)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;17272265;20023166;21257604;22021418;22247249;27862469", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Acts closely together with MAB12. Involved in the regulation of embryo patterning and cotyledon organogenesis. May act through transient repression of specific genes such as the ones responsive to auxin., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4I095;Q9C8A3", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016592 mediator complex", "go_biological_process": "GO:0040034 regulation of development, heterochronic;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0090213 regulation of radial pattern formation;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4I096-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDI6-1", "uniprot_id": "BRG2_ARATH", "mass": 40085.0, "length": 358, "protein_name": "Probable BOI-related E3 ubiquitin-protein ligase 2", "gene_name": "BRG2", "organism": "Arabidopsis", "refseq_name": "zinc ion binding protein", "refseq_ac": "NP_565200", "gene_names_uniprotkb": "BRG2; BOI-related gene 2; YUP8H12R.27; YUP8H12R_27", "gene_names_refseq": "BOI-related gene 2; BRG2; YUP8H12R.27; YUP8H12R_27", "protein_names_uniprotkb": "Probable BOI-related E3 ubiquitin-protein ligase 2; 2.3.2.27; RING-type E3 ubiquitin transferase BRG2", "protein_names_refseq": "zinc ion binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79110)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;20921156;23482857;27862469", "class_list": "", "function": "Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IDI7;O64540;Q0WLS3;Q0WLZ6;Q8LAY3", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006952 defense response;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0043067 regulation of programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IDI6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A4FVP6-1", "uniprot_id": "NAC16_ARATH", "mass": 63407.0, "length": 564, "protein_name": "NAC domain-containing protein 16", "gene_name": "NAC016", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 16", "refseq_ac": "NP_001077648", "gene_names_uniprotkb": "NAC016; F23M19.14; F23M19_14; NTL3; anac016", "gene_names_refseq": "F23M19.14; F23M19_14; NAC domain containing protein 16; NAC016; anac016", "protein_names_uniprotkb": "NAC domain-containing protein 16; ANAC016; Protein NTM1-like 3", "protein_names_refseq": "NAC domain containing protein 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G34180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;15029955;17158162;22074104;23926065;27862469", "class_list": "", "function": "Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcriptional activator that promotes leaf senescence by up-regulating senescence-associated genes in response to developmental and stress-induced senescence signals. Functions in salt and oxidative stress-responsive signaling pathways. Binds to the promoter of NAC029/NAP and NAC059/ORS1 genes (PubMed:23926065)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFG7;Q9XIC4", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:1900057 positive regulation of leaf senescence;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A4FVP6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IED2-1", "uniprot_id": "NAC13_ARATH", "mass": 59322.0, "length": 528, "protein_name": "NAC domain-containing protein 13", "gene_name": "NAC013; NAC13", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "NAC013; NAC13; ANAC013; ANAC13; F9L11.7; F9L11_7; NAC domain protein 13; NTL1", "gene_names_refseq": "", "protein_names_uniprotkb": "NAC domain-containing protein 13; ANAC013; Protein NTM1-like 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32870)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15029955;17158162;24045019;25348421;27862469", "class_list": "", "function": "Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in oxidative stress tolerance by mediating regulation of mitochondrial retrograde signaling during mitochondrial dysfunction. Interacts directly with the mitochondrial dysfunction DNA consensus motif 5'-CTTGNNNNNCA[AC]G-3', a cis-regulatory elements of several mitochondrial retrograde regulation-induced genes, and triggers increased oxidative stress tolerance., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94CC7;Q9MAQ1", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0031930 mitochondria-nucleus signaling pathway;GO:0010224 response to UV-B;GO:0010114 response to red light;GO:1900409 positive regulation of cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4IED2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "uniprot_id": "KTN81_ARATH", "mass": 112385.0, "length": 1019, "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1", "gene_name": "KTN80.1; KTN801", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": "NP_001323134", "gene_names_uniprotkb": "KTN80.1; KTN801; T28P6.17; T28P6_17", "gene_names_refseq": "T28P6.17; T28P6_17", "protein_names_uniprotkb": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11160)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;18223036;18552200;25561503;27862469;28978669;29654922", "class_list": "", "function": "May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). Microtubule severing may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669)., [UniProtKB, HAMAP, PubMed]; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays., [UniProtKB, HAMAP, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SXA3", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0008352 katanin complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0051013 microtubule severing;GO:0007019 microtubule depolymerization;GO:0051510 regulation of unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A1P8AW69-1", "record_type": "protein" }, { "uniprot_canonical_ac": "D7SFH9-1", "uniprot_id": "LRL26_ARATH", "mass": 123825.0, "length": 1118, "protein_name": "Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4", "gene_name": "LRK10L-2.6; SNC4", "organism": "Arabidopsis", "refseq_name": "suppressor of npr1-1 constitutive 4", "refseq_ac": "NP_176870", "gene_names_uniprotkb": "LRK10L-2.6; SNC4; F1O19.6; F1O19_6; GDPDL2; SNC4", "gene_names_refseq": "F1O19.6; F1O19_6; GDPDL2; Glycerophosphodiester phosphodiesterase (GDPD) like 2; SNC4; suppressor of npr1-1 constitutive 4", "protein_names_uniprotkb": "Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4; ATGDPDL2; Glycerophosphodiester phosphodiesterase-like 2; Probable receptor-like serine/threonine-protein kinase LRK10L-2.6", "protein_names_refseq": "suppressor of npr1-1 constitutive 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66980)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11526204;12805585;18718934;20508139;21323773;25267732;25561503;27862469;29654922", "class_list": "", "function": "Atypical receptor-like kinase involved in disease resistance., [UniProtKB, PubMed]", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZI0", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0008889 glycerophosphodiester phosphodiesterase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006952 defense response;GO:0045087 innate immune response;GO:0006968 cellular defense response;GO:0006071 glycerol metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "D7SFH9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVS0-1", "uniprot_id": "BTSL2_ARATH", "mass": 144923.0, "length": 1259, "protein_name": "Zinc finger protein BRUTUS-like At1g74770", "gene_name": "BTSL1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "BTSL1; F25A4.26; F25A4.27; F25A4_26", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein BRUTUS-like At1g74770", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74770)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;15644464;20466843;27862469", "class_list": "", "function": "Probable E3 ubiquitin-protein ligase that may regulate the response to iron deficiency and thus contributes to iron homeostasis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVS5;Q9SSG0;Q9SSG1", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "GO:0006879 intracellular iron ion homeostasis;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0098711 iron ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4HVS0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MS41-1", "uniprot_id": "CCR4D_ARATH", "mass": 47085.0, "length": 417, "protein_name": "Carbon catabolite repressor protein 4 homolog 4", "gene_name": "CCR4-4; HESP", "organism": "Arabidopsis", "refseq_name": "DNAse I-like superfamily protein", "refseq_ac": "NP_001077640", "gene_names_uniprotkb": "CCR4-4; HESP; F27M3.27; F27M3_27; HESP; T8E3.7", "gene_names_refseq": "F27M3.27; F27M3_27", "protein_names_uniprotkb": "Carbon catabolite repressor protein 4 homolog 4; 3.1.13.4; AtHESP; AtHesperin; CCR4 homolog 4; Protein HESPERIN", "protein_names_refseq": "DNAse I-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31500)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;14993207;22223895;26619288;27862469;31093672", "class_list": "", "function": "Acts as a catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover (By similarity). Transcriptional regulator of circadian rhythms with poly(A)-degrading activity that affects the expression and rhythmicity of the clock core oscillator genes TOC1 and CCA1 (PubMed:26619288). Deadenylation may be a mechanism involved in the regulation of the circadian clock (PubMed:26619288). May play a negative role in response against oxidative stress (PubMed:26619288). Possesses magnesium-dependent poly(A)-specific exoribonuclease activity in vitro and is almost inactive with poly(U), poly(C) and poly(G) as substrates (PubMed:26619288)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q304C9;Q3ED42;Q3ED43;Q84JM1;Q9C559", "ec_number_list": "", "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046872 metal ion binding;GO:0003730 mRNA 3'-UTR binding;GO:0004532 RNA exonuclease activity;GO:0004535 poly(A)-specific ribonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042752 regulation of circadian rhythm;GO:0048511 rhythmic process;GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A8MS41-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGJ9-1", "uniprot_id": "Y2278_ARATH", "mass": 82002.0, "length": 742, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g02780", "gene_name": "T20F6.8; T20F6_8", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_178381", "gene_names_uniprotkb": "T20F6.8; T20F6_8", "gene_names_refseq": "T20F6.8; T20F6_8", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At2g02780; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02780)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O64505;Q84WD0", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0004713 protein tyrosine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0045088 regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "C0LGJ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IS91-1", "uniprot_id": "RSA1_ARATH", "mass": 150913.0, "length": 1340, "protein_name": "Protein SHORT ROOT IN SALT MEDIUM 1", "gene_name": "RSA1", "organism": "Arabidopsis", "refseq_name": "ATP/GTP-binding protein family", "refseq_ac": "NP_178414", "gene_names_uniprotkb": "RSA1; SHORT ROOT IN SALT MEDIUM 1; T18E12.18; T18E12_18; emb1579; embryo defective 1579", "gene_names_refseq": "RSA1; SHORT ROOT IN SALT MEDIUM 1; T18E12.18; T18E12_18; emb1579; embryo defective 1579", "protein_names_uniprotkb": "Protein SHORT ROOT IN SALT MEDIUM 1; AtRSA1; Protein EMBRYO DEFECTIVE 1579", "protein_names_refseq": "ATP/GTP-binding protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G03150)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10617197;14593172;15266054;18433157;18463617;19376835;20466843;21768351;23111157;23328941;23572148;23660473;23776212;24009530;25561503;26091701;26187819;27862469;28154133;29167316;29654922;30833711", "class_list": "", "function": "Required for salt tolerance and sodium (Na) homeostasis after salt stress. Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Binds calcium., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 10, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 10, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 10, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 22, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "O81059;Q0WQ79;Q8W4H5", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0055078 sodium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 3.4, "record_id": "F4IS91-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IIS5-1", "uniprot_id": "KN5A_ARATH", "mass": 116223.0, "length": 1042, "protein_name": "Kinesin-like protein KIN-5A", "gene_name": "KIN5A; RSW7", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_180430", "gene_names_uniprotkb": "KIN5A; RSW7; LPH; RSW7; T8O18.9; T8O18_9", "gene_names_refseq": "T8O18.9; T8O18_9", "protein_names_uniprotkb": "Kinesin-like protein KIN-5A; AtKRP125c; Protein LOOPHOLE; Protein RADIALLY SWOLLEN 7", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28620)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11472632;12361973;16448571;16530461;17652157;22038119;26745275;27862469", "class_list": "", "function": "Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle (PubMed:17652157). Required during mitotic cytokinesis (PubMed:26745275)., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIB3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0008574 plus-end-directed microtubule motor activity;GO:0016787 hydrolase activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005819 spindle;GO:0005874 microtubule;GO:0005876 spindle microtubule;GO:0072686 mitotic spindle", "go_biological_process": "GO:0090307 mitotic spindle assembly;GO:0000281 mitotic cytokinesis;GO:0007018 microtubule-based movement;GO:0007052 mitotic spindle organization;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IIS5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E5KGE0-1", "uniprot_id": "BRIZ1_ARATH", "mass": 55215.0, "length": 488, "protein_name": "BRAP2 RING ZnF UBP domain-containing protein 1", "gene_name": "BRIZ1", "organism": "Arabidopsis", "refseq_name": "zinc finger (ubiquitin-hydrolase) domain-containing protein", "refseq_ac": "NP_181746", "gene_names_uniprotkb": "BRIZ1; RING-HCa; T24P15.7; T24P15_7", "gene_names_refseq": "BRAP2 RING ZnF UBP domain-containing protein 1; BRIZ1; T24P15.7; T24P15_7", "protein_names_uniprotkb": "BRAP2 RING ZnF UBP domain-containing protein 1; 2.3.2.27", "protein_names_refseq": "zinc finger (ubiquitin-hydrolase) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42160)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11910074;14593172;15644464;20810661;23111157;23328941;27862469", "class_list": "", "function": "RING-type ubiquitin E3 ligase required for seed germination and post-germination growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48524;Q8GWY2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016787 hydrolase activity;GO:0046982 protein heterodimerization activity;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0007265 Ras protein signal transduction;GO:0016567 protein ubiquitination;GO:0010029 regulation of seed germination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "E5KGE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ISL7-1", "uniprot_id": "TI236_ARATH", "mass": 240344.0, "length": 2166, "protein_name": "Protein TIC236, chloroplastic", "gene_name": "EMB2410; TIC236", "organism": "Arabidopsis", "refseq_name": "embryo defective 2410", "refseq_ac": "NP_001324007", "gene_names_uniprotkb": "EMB2410; TIC236; EMB2410; F3N11.11; F3N11_11; emb2410; embryo defective 2410", "gene_names_refseq": "F3N11.11; F3N11_11; emb2410; embryo defective 2410", "protein_names_uniprotkb": "Protein TIC236, chloroplastic; 236 kDa translocon at the inner-envelope-membrane of chloroplasts; Protein EMBRYO DEFECTIVE 2410", "protein_names_refseq": "embryo defective 2410", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25660)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;15266054;18463617;20466843;24924143;27862469;30464337", "class_list": "", "function": "Part of the inner chloroplast membrane translocon complex (TIC) which associates with the outer chloroplast membrane translocon complex (TOC) and forms a supercomplex involved in protein precursor import into the chloroplast stroma (PubMed:30464337). Required for the import of HSP93, TIC40 and RBCS protein precursors in the chloroplast stroma (PubMed:30464337). Links the outer and inner membrane translocons of the chloroplast envelope (PubMed:30464337)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SL97", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0031972 chloroplast intermembrane space", "go_biological_process": "GO:0009306 protein secretion", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4ISL7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ITL6-1", "uniprot_id": "RTE1_ARATH", "mass": 27932.0, "length": 250, "protein_name": "Protein REVERSION-TO-ETHYLENE SENSITIVITY1", "gene_name": "RTE1", "organism": "Arabidopsis", "refseq_name": "protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778)", "refseq_ac": "NP_180177", "gene_names_uniprotkb": "RTE1; AtRTE1; T19L18.12; T19L18_12", "gene_names_refseq": "AtRTE1; REVERSION-TO-ETHYLENE SENSITIVITY1; RTE1; T19L18.12; T19L18_12", "protein_names_uniprotkb": "Protein REVERSION-TO-ETHYLENE SENSITIVITY1", "protein_names_refseq": "protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26070)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;11910074;14593172;16682642;17644624;17999643;18643990;19369589;20952388;27862469", "class_list": "", "function": "Acts at an early step in the ethylene signaling pathway. Positively regulates ETR1, leading to the negative regulation of ethylene responses., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80989;Q8GZ39", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009723 response to ethylene;GO:0010104 regulation of ethylene-activated signaling pathway;GO:0010105 negative regulation of ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4ITL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IIU4-1", "uniprot_id": "AIR9_ARATH", "mass": 186862.0, "length": 1708, "protein_name": "187-kDa microtubule-associated protein AIR9", "gene_name": "AIR9", "organism": "Arabidopsis", "refseq_name": "Outer arm dynein light chain 1 protein", "refseq_ac": "NP_181015", "gene_names_uniprotkb": "AIR9; T29F13.11; T29F13_11; T29F13", "gene_names_refseq": "AIR9; AUXIN-INDUCED IN ROOT CULTURES 9; T29F13.11; T29F13_11", "protein_names_uniprotkb": "187-kDa microtubule-associated protein AIR9; Auxin-induced in root cultures protein 9", "protein_names_refseq": "Outer arm dynein light chain 1 protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34680)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10080694;10617197;17027491;17317660;18463617;19376835;20374526;20466843;21768351;22060019;23111157;23572148;23660473;23776212;25561503;25908862;26091701;27419465;27532006;27862469;28011693;29654922;30833711", "class_list": "", "function": "Microtubule-associated protein that may be involved in the maturation of cell plates and proper insertion of cross-walls after cytokinesis., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 23, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O64588;Q00NU6;Q0WPR3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0009524 phragmoplast", "go_biological_process": "GO:0051301 cell division;GO:0009733 response to auxin;GO:0010102 lateral root morphogenesis", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "F4IIU4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IH25-1", "uniprot_id": "BOP1_ARATH", "mass": 85383.0, "length": 753, "protein_name": "Ribosome biogenesis protein BOP1 homolog", "gene_name": "ATPEP1; BOP1", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": "NP_181567", "gene_names_uniprotkb": "ATPEP1; BOP1; PEIP1; T3G21.13; T3G21_13", "gene_names_refseq": "T3G21.13; T3G21_13", "protein_names_uniprotkb": "Ribosome biogenesis protein BOP1 homolog; AtPEIP1; Pescadillo-interacting protein 1; Protein BLOCK OF CELL PROLIFERATION 1", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40360)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;17272265;23909681;25443833;26940494;27862469", "class_list": "", "function": "Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (By similarity). Plays an essential role in cell growth and survival through its regulation of ribosome biogenesis and mitotic progression (PubMed:26940494)., [UniProtKB, HAMAP, PubMed]; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIY9", "ec_number_list": "", "go_molecular_function": "GO:0043021 ribonucleoprotein complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0030687 preribosome, large subunit precursor;GO:0070545 PeBoW complex", "go_biological_process": "GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0007276 gamete generation;GO:0051302 regulation of cell division;GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IH25-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IS56-1", "uniprot_id": "ILK1_ARATH", "mass": 54415.0, "length": 479, "protein_name": "Integrin-linked protein kinase 1", "gene_name": "ILK1", "organism": "Arabidopsis", "refseq_name": "Integrin-linked protein kinase family", "refseq_ac": "NP_181913", "gene_names_uniprotkb": "ILK1; APK1; F18O19.4", "gene_names_refseq": "F18O19.4", "protein_names_uniprotkb": "Integrin-linked protein kinase 1; 2.7.11.1; Ankyrin protein kinase 1", "protein_names_refseq": "Integrin-linked protein kinase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43850)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12650621;23572148;23660473;23776212;25561503;27208244;27862469;28011693", "class_list": "", "function": "Functions as a link between plant defense pathways, stress responses and potassium homeostasis. Promotes osmotic stress sensitivity, responses to the bacterial-derived pathogen-associated molecular pattern (PAMP) flg22, and resistance to bacterial pathogens. Promotes the accumulation of POT5/HAK5, a potassium transporter that mediates high-affinity uptake during potassium deficiency., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IS57;Q8LL75;Q9SDB3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0009898 cytoplasmic side of plasma membrane;GO:0005737 cytoplasm", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0007165 signal transduction;GO:0045087 innate immune response;GO:0046777 protein autophosphorylation;GO:0007229 integrin-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IS56-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IHS9-1", "uniprot_id": "UXT1_ARATH", "mass": 37444.0, "length": 342, "protein_name": "UDP-xylose transporter 1", "gene_name": "LOG1; UXT1", "organism": "Arabidopsis", "refseq_name": "Nucleotide/sugar transporter family protein", "refseq_ac": "NP_850120", "gene_names_uniprotkb": "LOG1; UXT1; ATLOG1; LONELY GUY 1; T1B3.18", "gene_names_refseq": "", "protein_names_uniprotkb": "UDP-xylose transporter 1", "protein_names_refseq": "Nucleotide/sugar transporter family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28315)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;25053812;25804536;27862469", "class_list": "", "function": "Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Nucleotide-sugar transporter that transports UDP-xylose and UMP in a strict counter-exchange mode., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3LFB1", "ec_number_list": "3.2.2.n1", "go_molecular_function": "GO:0015297 antiporter activity;GO:0005464 UDP-xylose transmembrane transporter activity;GO:0102682 cytokinin riboside 5'-monophosphate phosphoribohydrolase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0015790 UDP-xylose transmembrane transport;GO:0009834 plant-type secondary cell wall biogenesis;GO:1900030 regulation of pectin biosynthetic process;GO:0009691 cytokinin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IHS9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C5H8J1-1", "uniprot_id": "EME1B_ARATH", "mass": 62193.0, "length": 551, "protein_name": "Crossover junction endonuclease EME1B", "gene_name": "EME1B", "organism": "Arabidopsis", "refseq_name": "essential meiotic endonuclease 1B", "refseq_ac": "NP_179804", "gene_names_uniprotkb": "EME1B; ATEME1B; T26C19.20; T26C19_20", "gene_names_refseq": "ATEME1B; EME1B; T26C19.20; T26C19_20; essential meiotic endonuclease 1B", "protein_names_uniprotkb": "Crossover junction endonuclease EME1B; 3.1.22.-; AtEME1B; Essential meiotic endonuclease 1B", "protein_names_refseq": "essential meiotic endonuclease 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22140)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;19339504;20466843;27862469", "class_list": "", "function": "Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meiotic recombination events that are insensitive to crossover interference., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIF0", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0048476 Holliday junction resolvase complex", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0006302 double-strand break repair", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "C5H8J1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IFN6-1", "uniprot_id": "DPOE2_ARATH", "mass": 244993.0, "length": 2138, "protein_name": "DNA polymerase epsilon catalytic subunit B", "gene_name": "POL2B; TIL2", "organism": "Arabidopsis", "refseq_name": "DNA polymerase epsilon catalytic subunit", "refseq_ac": "NP_180280", "gene_names_uniprotkb": "POL2B; TIL2; POL2B; T20P8.17; T20P8_17; TIL2; TILTED 2", "gene_names_refseq": "POL2B; T20P8.17; T20P8_17; TIL2; TILTED 2", "protein_names_uniprotkb": "DNA polymerase epsilon catalytic subunit B; 2.7.7.7; AtPOL2b; DNA polymerase 2 b; DNA polymerase II subunit b; Protein TILTED 2", "protein_names_refseq": "DNA polymerase epsilon catalytic subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27120)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;16212602;16278345;19947980;22060019;27862469", "class_list": "", "function": "DNA polymerase II participates in chromosomal DNA replication., [UniProtKB, UniProtKB, UniProtKB]; DNA polymerase II, which participates in chromosomal DNA replication (By similarity). Involved in the determination of cell fate during plant embryogenesis. Contributes to the flowering time repression., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZVC8", "ec_number_list": "2.7.7.7;2.7.7.102;2.7.7.49;3.4.23.-;4.2.99.-", "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity;GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0051539 4 iron, 4 sulfur cluster binding", "go_cellular_component": "GO:0008622 epsilon DNA polymerase complex;GO:0005634 nucleus", "go_biological_process": "GO:0006272 leading strand elongation;GO:0006297 nucleotide-excision repair, DNA gap filling;GO:0006287 base-excision repair, gap-filling;GO:0045004 DNA replication proofreading;GO:0000278 mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IFN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IRB4-1", "uniprot_id": "MYB88_ARATH", "mass": 54508.0, "length": 484, "protein_name": "Transcription factor MYB88", "gene_name": "MYB88", "organism": "Arabidopsis", "refseq_name": "myb domain protein 88", "refseq_ac": "NP_001030957", "gene_names_uniprotkb": "MYB88; AtMYB88; T20F6.4; T20F6_4; myb domain protein 88", "gene_names_refseq": "AtMYB88; MYB88; T20F6.4; T20F6_4; myb domain protein 88", "protein_names_uniprotkb": "Transcription factor MYB88; AtMYB88; Myb-related protein 88", "protein_names_refseq": "myb domain protein 88", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02820)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;11597504;16155180;20675570;21105921;21772250;22915737;24123248;24571519;24687979;26391711;26578065;26578169;27862469;9839469", "class_list": "", "function": "Transcription factor that binds to DNA in promoters cis-regulatory element 5'-GGCGCGC-3' of cell cycle genes, including cyclins, cyclin-dependent kinases (CDKs), and components of the pre-replication complex (PubMed:20675570, PubMed:24687979). Binds to DNA in promoters cis-regulatory element 5'-AGCCG-3' of auxin regulated genes (e.g. PIN3 and PIN7) (PubMed:26578169). Together with FAMA and MYB124, ensures that stomata contain just two guard cells (GCs) by enforcing a single symmetric precursor cell division before stomatal maturity (PubMed:24571519). Represses the expression of the mitosis-inducing factors CDKB1-1 and CDKA-1, specifically required for the last guard mother cells (GMC) symmetric divisions in the stomatal pathway (PubMed:20675570, PubMed:24687979). Represses CYCA2-3 in newly formed guard cells (PubMed:21772250). Together with MYB88, regulates stomata spacing by restricting divisions late in the stomatal cell lineage thus limiting the number of GMC divisions (PubMed:16155180). In collaboration with CDKB1-1 and CDKB1-2, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248). Involved in sensing and/or transducing abiotic stress (e.g. drought and salt), probably via the positive regulation of NAC019 (PubMed:21105921). Regulates female reproduction being required for entry into megasporogenesis, probably via the regulation of cell cycle genes (PubMed:22915737). Plays a minor role in lateral roots (LRs) initiation (PubMed:26578065). Involved complementarily in establishing the gravitropic set-point angles of lateral roots by regulating the transcription of PIN3 and PIN7 in gravity-sensing cells of primary and lateral roots (PubMed:26578169)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IRB5;O64502;Q94GA5", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0050891 multicellular organismal-level water homeostasis;GO:1902806 regulation of cell cycle G1/S phase transition;GO:0032875 regulation of DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "F4IRB4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IN23-1", "uniprot_id": "BZP34_ARATH", "mass": 35806.0, "length": 321, "protein_name": "Basic leucine zipper 34", "gene_name": "BZIP34", "organism": "Arabidopsis", "refseq_name": "Basic-leucine zipper (bZIP) transcription factor family protein", "refseq_ac": "NP_565970", "gene_names_uniprotkb": "BZIP34; ATBZIP34; MHK10.10; MHK10_10", "gene_names_refseq": "ATBZIP34; BZIP34; MHK10.10; MHK10_10", "protein_names_uniprotkb": "Basic leucine zipper 34; AtbZIP34; bZIP protein 34", "protein_names_refseq": "Basic-leucine zipper (bZIP) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42380)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11906833;14593172;17719007;19449183;27862469;27896439", "class_list": "", "function": "Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "F4IN22;Q8S9M0;Q9SLC1", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4IN23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A7UL74-1", "uniprot_id": "CTF7_ARATH", "mass": 38988.0, "length": 345, "protein_name": "Protein CHROMOSOME TRANSMISSION FIDELITY 7", "gene_name": "CTF7", "organism": "Arabidopsis", "refseq_name": "protein CTF7", "refseq_ac": "NP_194868", "gene_names_uniprotkb": "CTF7; AtCTF7; ECO1; F3L17.7", "gene_names_refseq": "AtCTF7; CHROMOSOME TRANSMISSION FIDELITY 7; CTF7; ECO1; F3L17.7", "protein_names_uniprotkb": "Protein CHROMOSOME TRANSMISSION FIDELITY 7; 2.3.1.-; Cohesion establishment factor CTF7; Protein ESTABLISHMENT OF COHESION 1", "protein_names_refseq": "protein CTF7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31400)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;20671110;22060019;23750584;26813623;27862469", "class_list": "", "function": "Acetyltransferase required for the establishment of sister chromatid cohesion (PubMed:20671110). Involved in preservation of genome integrity and meiosis (PubMed:20671110, PubMed:23750584). Required for DNA repair and for the regulation of chromosome segregation during mitotic cell division (PubMed:20671110, PubMed:23750584). Knock-down mutants are extremely dwarf (PubMed:20671110). Regulator of sister chromatid cohesion in meiosis which negatively regulates cohesin association with chromatin, acting as an antagonist of WAPL1 and WAPL2 (PubMed:26813623)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49589", "ec_number_list": "", "go_molecular_function": "GO:0061733 protein-lysine-acetyltransferase activity;GO:0008270 zinc ion binding;GO:0016407 acetyltransferase activity;GO:0016746 acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000785 chromatin", "go_biological_process": "GO:0006281 DNA repair;GO:0051301 cell division;GO:0000724 double-strand break repair via homologous recombination;GO:0045132 meiotic chromosome segregation;GO:0000070 mitotic sister chromatid segregation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A7UL74-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JJL0-1", "uniprot_id": "ENDO4_ARATH", "mass": 34204.0, "length": 299, "protein_name": "Endonuclease 4", "gene_name": "ENDO4", "organism": "Arabidopsis", "refseq_name": "endonuclease 4", "refseq_ac": "NP_001328107", "gene_names_uniprotkb": "ENDO4; F18E5; endonuclease 4", "gene_names_refseq": "ENDO4; endonuclease 4", "protein_names_uniprotkb": "Endonuclease 4; 3.1.30.1; AtENDO4; Deoxyribonuclease ENDO4; Single-stranded-nucleate endonuclease ENDO4", "protein_names_refseq": "endonuclease 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21585)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;17651368;23620482;27862469", "class_list": "", "function": "Endonuclease that can use single-stranded RNA and DNA as substrates (PubMed:23620482). In contradiction with PubMed:23620482, cannot hydrolyze single-stranded DNA and does not cleave mismatches (PubMed:17651368)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 5, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004519 endonuclease activity;GO:0004521 RNA endonuclease activity;GO:0000014 single-stranded DNA endodeoxyribonuclease activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006308 DNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JJL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGQ7-1", "uniprot_id": "Y4245_ARATH", "mass": 100692.0, "length": 898, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g20450", "gene_name": "F9F13.100; F9F13_100", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_193778", "gene_names_uniprotkb": "F9F13.100; F9F13_100", "gene_names_refseq": "F9F13.100; F9F13_100", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At4g20450; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20450)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;20064227;23111157;27862469", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 10, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "Q9SUN4", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "C0LGQ7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2RVK7-1", "uniprot_id": "RP41L_ARATH", "mass": 27448.0, "length": 256, "protein_name": "Exosome complex component RRP41-like", "gene_name": "RRP41L", "organism": "Arabidopsis", "refseq_name": "3'-5'-exoribonuclease family protein", "refseq_ac": "NP_001320075", "gene_names_uniprotkb": "RRP41L; F27G19.90; F27G19_90; RRP41 like; SLG", "gene_names_refseq": "F27G19.90; F27G19_90; RRP41 like; RRP41L", "protein_names_uniprotkb": "Exosome complex component RRP41-like; Protein SLOWER GROWTH; Ribosomal RNA-processing protein 41-like", "protein_names_refseq": "3'-5'-exoribonuclease family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27490)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11910074;23132787;25561503;27862469", "class_list": "", "function": "Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity (By similarity). Plays an important role in seed germination and early seedling growth by mediating specific cytoplasmic mRNA decay of transcripts coding for the abscisic acid (ABA) biosynthetic enzymes NCED5 and NCED6, and the ABA signaling transcription factors ABI3 and ABI4 (PubMed:23132787)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWJ0;Q9SZS4", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0008408 3'-5' exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0000176 nuclear exosome (RNase complex);GO:0000177 cytoplasmic exosome (RNase complex)", "go_biological_process": "GO:0071028 nuclear mRNA surveillance;GO:0006364 rRNA processing;GO:0016075 rRNA catabolic process;GO:0034475 U4 snRNA 3'-end processing;GO:0071051 poly(A)-dependent snoRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A2RVK7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JTP5-1", "uniprot_id": "STY46_ARATH", "mass": 64811.0, "length": 575, "protein_name": "Serine/threonine-protein kinase STY46", "gene_name": "STY46", "organism": "Arabidopsis", "refseq_name": "ACT-like protein tyrosine kinase family protein", "refseq_ac": "NP_568041", "gene_names_uniprotkb": "STY46; F20M13.30; F20M13_30", "gene_names_refseq": "F20M13.30; F20M13_30; STY46; serine/threonine/tyrosine kinase 46", "protein_names_uniprotkb": "Serine/threonine-protein kinase STY46; 2.7.11.1; Serine/threonine/tyrosine-protein kinase 46", "protein_names_refseq": "ACT-like protein tyrosine kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38470)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10617198;16429265;17090544;18433157;18463617;19245862;19376835;21768351;21799034;23111157;23172892;23328941;23572148;23660473;23776212;23820729;24601666;25561503;26091701;27419465;27532006;27862469;29167316;29654922;30833711", "class_list": "", "function": "Serine/threonine protein kinase that specifically phosphorylates chloroplast precursor proteins in the cytosol within the cleavable presequences (transit peptides). May be part of a cytosolic regulatory network involved in chloroplast protein import. Does not phosphorylate mitochondrion precursor proteins. Specific for ATP and does not utilize other NTPs (PubMed:16429265, PubMed:17090544). Plays a role in chloroplast biogenesis and differentiation in cotyledons, possibly through phosphorylation of chloroplast preproteins (PubMed:21799034)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56Z78;Q9SZM7", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0007165 signal transduction;GO:0071456 cellular response to hypoxia;GO:0009658 chloroplast organization;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4JTP5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1A6M1-1", "uniprot_id": "PTAC5_ARATH", "mass": 44020.0, "length": 387, "protein_name": "Protein disulfide isomerase pTAC5, chloroplastic", "gene_name": "PTAC5", "organism": "Arabidopsis", "refseq_name": "plastid transcriptionally active 5", "refseq_ac": "NP_001328389", "gene_names_uniprotkb": "PTAC5; F18A5.60; F18A5_60", "gene_names_refseq": "F18A5.60; F18A5_60; PTAC5; plastid transcriptionally active 5", "protein_names_uniprotkb": "Protein disulfide isomerase pTAC5, chloroplastic; 5.3.4.1; Protein PLASTID TRANSCRIPTIONALLY ACTIVE 5; pTAC5", "protein_names_refseq": "plastid transcriptionally active 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13670)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;16326926;19376835;23922206;24019900;25561503;27862469;30833711", "class_list": "", "function": "Exhibits zinc-dependent disulfide isomerase activity. Required for seedling and chloroplast development under heat stress, probably by maintaining plastid-encoded RNA polymerase (PEP)-dependent transcription., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8B4I4;Q9SVP5", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003756 protein disulfide isomerase activity;GO:0140096 catalytic activity, acting on a protein", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0009408 response to heat;GO:0009416 response to light stimulus;GO:0009658 chloroplast organization;GO:0042793 plastid transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A1A6M1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JP52-1", "uniprot_id": "PQT3_ARATH", "mass": 91306.0, "length": 826, "protein_name": "E3 ubiquitin ligase PARAQUAT TOLERANCE 3", "gene_name": "PQT3", "organism": "Arabidopsis", "refseq_name": "DWNN domain, a CCHC-type zinc finger", "refseq_ac": "NP_001190750", "gene_names_uniprotkb": "PQT3; DL4740W; FCAALL.426; dl4740w", "gene_names_refseq": "DL4740W; FCAALL.426", "protein_names_uniprotkb": "E3 ubiquitin ligase PARAQUAT TOLERANCE 3; 2.3.2.27", "protein_names_refseq": "DWNN domain, a CCHC-type zinc finger", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17410)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;18463617;19245862;20466843;23111157;25561503;27676073;27862469;29654922;30833711;9461215", "class_list": "", "function": "E3 ubiquitin ligase acting as a negative regulator of oxidative stress tolerance, probably by mediating 26S proteasome-mediated degradation of PRMT13/PRMT4B, thus preventing APX1 and GPX1 accumulation via the reduction of histone H3 methylation (H3R17me2a). Confers sensitivity to cadmium CdCl(2) and salt NaCl stresses., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JP50;O23583;O23584;Q0WV36", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0061659 ubiquitin-like protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0006979 response to oxidative stress;GO:0042542 response to hydrogen peroxide;GO:0046686 response to cadmium ion;GO:1902884 positive regulation of response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4JP52-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JPW1-1", "uniprot_id": "BASS5_ARATH", "mass": 44582.0, "length": 407, "protein_name": "Probable sodium/metabolite cotransporter BASS5, chloroplastic", "gene_name": "BASS5; BAT5", "organism": "Arabidopsis", "refseq_name": "bile acid transporter 5", "refseq_ac": "NP_001319909", "gene_names_uniprotkb": "BASS5; BAT5; BASS5; BAT5; F16J13.100; F16J13_100; bile acid transporter 5", "gene_names_refseq": "BASS5; BAT5; BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5; F16J13.100; F16J13_100; bile acid transporter 5", "protein_names_uniprotkb": "Probable sodium/metabolite cotransporter BASS5, chloroplastic; Bile acid transporter 5; Bile acid-sodium symporter family protein 5", "protein_names_refseq": "bile acid transporter 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G12030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;14993207;19542295;19633020;27862469", "class_list": "", "function": "Plastidic transporter involved in the biosynthesis of aliphatic glucosinolates by translocating the biosynthetic intermediates of Met-derived glucosinolates across chloroplast membranes. Transports short chain (C2) alpha-keto acids, such as 4-methylsulfanyl-2-oxobutanoic acid, from the cytosol to the chloroplast where they are subjected to chain elongation cycles. Also functions in the transport of chain-elongated (C3 to C8) Met derivatives from the chloroplast to the cytosol. Does not seem to be involved in the transport of indole-derived glucosinolates., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94A17;Q9SZ68", "ec_number_list": "", "go_molecular_function": "GO:0008028 monocarboxylic acid transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009611 response to wounding;GO:0009753 response to jasmonic acid;GO:0019761 glucosinolate biosynthetic process;GO:0033506 glucosinolate biosynthetic process from homomethionine", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JPW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JNA9-1", "uniprot_id": "RPP4_ARATH", "mass": 130429.0, "length": 1147, "protein_name": "Disease resistance protein RPP4", "gene_name": "RPP4", "organism": "Arabidopsis", "refseq_name": "Disease resistance protein (TIR-NBS-LRR class) family", "refseq_ac": "NP_193420", "gene_names_uniprotkb": "RPP4; CHS2; DL4460C; FCAALL.47; dl4460c", "gene_names_refseq": "DL4460C; FCAALL.47; RPP4; recognition of peronospora parasitica 4", "protein_names_uniprotkb": "Disease resistance protein RPP4; 3.2.2.6; Protein CHILLING-SENSITIVE 2; Protein RECOGNITION OF PERONOSPORA PARASITICA 4", "protein_names_refseq": "Disease resistance protein (TIR-NBS-LRR class) family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16860)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11846877;11910074;14593172;20699401;27862469;9461215", "class_list": "", "function": "TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis isolates Emoy2 and Emwa1 (downy mildew disease) (PubMed:11846877). Plays a role in the regulation of temperature response during plant growth and survival (PubMed:20699401)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23527;O23528;Q8GW40;Q8L843;Q8S4Q0", "ec_number_list": "3.2.2.6;3.2.2.-", "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating;GO:0030275 LRR domain binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JNA9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JNY0-1", "uniprot_id": "APE2_ARATH", "mass": 67825.0, "length": 610, "protein_name": "DNA-(apurinic or apyrimidinic site) endonuclease 2", "gene_name": "APE2", "organism": "Arabidopsis", "refseq_name": "endonuclease/exonuclease/phosphatase family protein", "refseq_ac": "NP_195329", "gene_names_uniprotkb": "APE2; T19K4.180; T19K4_180", "gene_names_refseq": "T19K4.180; T19K4_180", "protein_names_uniprotkb": "DNA-(apurinic or apyrimidinic site) endonuclease 2; 3.1.-.-; Apurinic-apyrimidinic endonuclease 2", "protein_names_refseq": "endonuclease/exonuclease/phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36050)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;19172180;19423640;23111157;25228464;25569774;27862469", "class_list": "", "function": "Exhibits apurinic/apyrimidinic (AP) endonuclease activity in vitro (PubMed:25569774). By contrast, another report show that APE2 has no biochemical activity (PubMed:25228464). Unable to catalyze the conversion of 3'-phosphor-alpha,beta-unsaturated aldehyde (3'-PUA) to 3'-OH (PubMed:25228464, PubMed:25569774). Has no in vitro 3'-phosphatase activity (PubMed:25228464, PubMed:25569774). Redundant with APE1L and at least one functional allele is required for seed viability (PubMed:19172180). Has a strong non-specific affinity to DNA (PubMed:25228464)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z270;O65642;Q8W4I0", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity;GO:0008081 phosphoric diester hydrolase activity;GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity;GO:0004527 exonuclease activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus", "go_biological_process": "GO:0006281 DNA repair;GO:0006284 base-excision repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JNY0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JIN3-1", "uniprot_id": "DNJ29_ARATH", "mass": 74825.0, "length": 661, "protein_name": "DnaJ protein ERDJ2B", "gene_name": "ATERDJ2B; ERDJ2B", "organism": "Arabidopsis", "refseq_name": "DnaJ / Sec63 Brl domains-containing protein", "refseq_ac": "NP_567621", "gene_names_uniprotkb": "ATERDJ2B; ERDJ2B; C29; F7J7.120; F7J7_120", "gene_names_refseq": "ATERDJ2B; F7J7.120; F7J7_120", "protein_names_uniprotkb": "DnaJ protein ERDJ2B; AtDjC29; AtERdj2B; AtJ29; Chaperone protein dnaJ 29; Endoplasmic reticulum dnaJ domain-containing protein 2B; Translocation protein SEC63 homolog ERDJ2B", "protein_names_refseq": "DnaJ / Sec63 Brl domains-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11599562;14593172;18718935;22899711;27862469", "class_list": "", "function": "Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O49559;Q949Z5", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005789 endoplasmic reticulum membrane;GO:0031207 Sec62/Sec63 complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane;GO:0015031 protein transport;GO:0006614 SRP-dependent cotranslational protein targeting to membrane", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JIN3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JUU5-1", "uniprot_id": "S2P_ARATH", "mass": 56824.0, "length": 513, "protein_name": "Membrane-bound transcription factor site-2 protease homolog", "gene_name": "S2P", "organism": "Arabidopsis", "refseq_name": "Peptidase M50 family protein", "refseq_ac": "NP_001328927", "gene_names_uniprotkb": "S2P; F1C12.220; F1C12_220", "gene_names_refseq": "F1C12.220; F1C12_220", "protein_names_uniprotkb": "Membrane-bound transcription factor site-2 protease homolog; 3.4.24.-; Endopeptidase S2P", "protein_names_refseq": "Peptidase M50 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20310)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;20876872;27862469", "class_list": "", "function": "Metalloprotease that catalyzes the second step (site-2 cleavage) in the proteolytic activation of various factors, after site-1 cleavage. Part of a regulated intramembrane proteolysis (RIP) cascade. After ER stress, cleaves BZIP17 and BZIP28 proteins which function as stress sensors and transducers in ER stress signaling pathway. The N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65444", "ec_number_list": "", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0006508 proteolysis;GO:0009651 response to salt stress;GO:0031293 membrane protein intracellular domain proteolysis;GO:0071475 cellular hyperosmotic salinity response;GO:1905897 regulation of response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4JUU5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JQH3-1", "uniprot_id": "AMPP1_ARATH", "mass": 71993.0, "length": 645, "protein_name": "Aminopeptidase P1", "gene_name": "APP1", "organism": "Arabidopsis", "refseq_name": "aminopeptidase P1", "refseq_ac": "NP_195394", "gene_names_uniprotkb": "APP1; AP22.64; AP22_64; ATAPP1; C7A10.600; aminopeptidase P1", "gene_names_refseq": "AP22.64; AP22_64; APP1; ARABIDOPSIS THALIANA AMINOPEPTIDASE P1; ATAPP1; aminopeptidase P1", "protein_names_uniprotkb": "Aminopeptidase P1; 3.4.11.9; AtAPP1", "protein_names_refseq": "aminopeptidase P1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11891249;18463617;20466843;22223895;27862469;30833711;9461215", "class_list": "", "function": "Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro (By similarity). Aminopeptidase that binds to the auxin transport inhibitor N-1-naphthylphthalamic acid (NPA). May play a negative role in the regulation of PIN auxin transport proteins (PubMed:11891249)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23206;Q6Q8B7;Q8H1P6", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0030145 manganese ion binding;GO:0004177 aminopeptidase activity;GO:0070006 metalloaminopeptidase activity;GO:0010013 N-1-naphthylphthalamic acid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006508 proteolysis;GO:0009926 auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JQH3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C6KIE6-1", "uniprot_id": "XLG2_ARATH", "mass": 97183.0, "length": 861, "protein_name": "Extra-large guanine nucleotide-binding protein 2", "gene_name": "XLG2", "organism": "Arabidopsis", "refseq_name": "extra-large GTP-binding protein 2", "refseq_ac": "NP_195165", "gene_names_uniprotkb": "XLG2; F10M10.160; F10M10_160", "gene_names_refseq": "F10M10.160; F10M10_160; XLG2; extra-large GTP-binding protein 2", "protein_names_uniprotkb": "Extra-large guanine nucleotide-binding protein 2; Extra-large G protein 2; Extra-large GTP-binding protein 2", "protein_names_refseq": "extra-large GTP-binding protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34390)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;17999646;19376835;19825634;21768351;22074104;22232549;23111157;25561503;27043937;27419465;27862469;28011693;29654922", "class_list": "", "function": "Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (By similarity). Binds GTP with specificity. Plays a role in the root morphogenesis by regulation of the cell proliferation. Acts as a positive regulator in resistance to pathogen that triggers the salicylic acid (SA) pathway. Promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo leading to the activation of floral integrator genes., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ04", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008270 zinc ion binding;GO:0001664 G protein-coupled receptor binding;GO:0031683 G-protein beta/gamma-subunit complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0071944 cell periphery;GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway;GO:0009617 response to bacterium;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0034052 positive regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "C6KIE6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JGZ1-1", "uniprot_id": "MED16_ARATH", "mass": 138187.0, "length": 1278, "protein_name": "Mediator of RNA polymerase II transcription subunit 16", "gene_name": "MED16; SFR6", "organism": "Arabidopsis", "refseq_name": "sensitive to freezing 6", "refseq_ac": "NP_001190676", "gene_names_uniprotkb": "MED16; SFR6; AtSFR6; IEN1; MED16_1; MED16; MEDIATOR 16; SENSITIVE TO FREEZING 6; SFR6; T1J1.2; T1J1_2; YID1", "gene_names_refseq": "AtSFR6; IEN1; INSENSITIVE TO EXOGENOUS NAD+ 1; MED16; MEDIATOR 16; SENSITIVE TO FREEZING 6; SFR6; T1J1.2; T1J1_2; YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1; YID1", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 16; Protein SENSITIVE TO FREEZING 6", "protein_names_refseq": "sensitive to freezing 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04920)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12753580;17560376;18614706;19067974;22021418;22494141;27862469;30833711", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the regulation of the circadian clock, in the control of flowering time, in freezing- and osmotic-stress tolerance and in both salicylic acid- and jasmonate-mediated defense gene expression., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JGZ2;Q9M0Y7", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006970 response to osmotic stress;GO:0006355 regulation of DNA-templated transcription;GO:0032922 circadian regulation of gene expression;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JGZ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2RVM0-1", "uniprot_id": "TIC32_ARATH", "mass": 34740.0, "length": 322, "protein_name": "Short-chain dehydrogenase TIC 32, chloroplastic", "gene_name": "TIC32-IVA; TIC32", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": "NP_001119035", "gene_names_uniprotkb": "TIC32-IVA; TIC32; AtTic32-IVa; F16G20.130; F16G20_130; Tic32-IVa", "gene_names_refseq": "AtTic32-IVa; F16G20.130; F16G20_130; Tic32-IVa; translocon at the inner envelope membrane of chloroplasts 32-IVa", "protein_names_uniprotkb": "Short-chain dehydrogenase TIC 32, chloroplastic; 1.1.1.-; AtTIC32; Translocon at the inner envelope membrane of chloroplasts 32", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;15033972;15180984;20100520;25561503;27862469", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H4I7;O81739;Q0WTU0;Q8L9T6", "ec_number_list": "", "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A2RVM0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JGP4-1", "uniprot_id": "KN14D_ARATH", "mass": 89194.0, "length": 790, "protein_name": "Kinesin-like protein KIN-14D", "gene_name": "ATK5; KIN14D", "organism": "Arabidopsis", "refseq_name": "kinesin 5", "refseq_ac": "NP_001329202", "gene_names_uniprotkb": "ATK5; KIN14D; ATK5; C17L7.110; C17L7_110; C6L9.1; kinesin 5", "gene_names_refseq": "ATK5; C17L7.110; C17L7_110; kinesin 5", "protein_names_uniprotkb": "Kinesin-like protein KIN-14D; AtKIN14b", "protein_names_refseq": "kinesin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G05190)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11472632;15659646;16448571;17220198;18088313;22038119;22060019;27862469", "class_list": "", "function": "Kinesin that supports microtubule movement in an ATP-dependent manner and that functions as a minus-end directed motor as well as a plus-end tracking protein. During mitosis, is involved in early spindle assembly. Participates in the capture of antiparallel interpolar microtubules and helps in generating force to coalign microtubules., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WP75;Q6NQ77;Q9M0X6", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex;GO:0005876 spindle microtubule", "go_biological_process": "GO:0051301 cell division;GO:0007018 microtubule-based movement;GO:0000226 microtubule cytoskeleton organization;GO:0051225 spindle assembly", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JGP4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A4FVP2-1", "uniprot_id": "TPS03_ARATH", "mass": 65753.0, "length": 565, "protein_name": "Terpenoid synthase 3, chloroplastic", "gene_name": "TPS03", "organism": "Arabidopsis", "refseq_name": "terpene synthase 03", "refseq_ac": "NP_001031651", "gene_names_uniprotkb": "TPS03; ATTPS03; DL4395W; FCAALL.18; dl4395w; terpene synthase 03", "gene_names_refseq": "ATTPS03; DL4395W; FCAALL.18; TPS03; terpene synthase 03", "protein_names_uniprotkb": "Terpenoid synthase 3, chloroplastic; (E)-beta-ocimene synthase; (E,E)-alpha-farnesene synthase; 4.2.3.106; 4.2.3.46; AtTPS03", "protein_names_refseq": "terpene synthase 03", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16740)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;11710601;11910074;12207221;12566586;12624761;12777052;16297850;17905899;20463089;27862469;9461215", "class_list": "", "function": "Predominantly involved in sesquiterpenes (C15) biosynthesis. Using FPP as substrate, the major product is (E,E)-alpha-farnesene with minor amounts of (Z,E)-alpha-farnesene and (E,E)-beta-farnesene. Using GPP as substrate, could also be able in vitro to synthesize monoterpene (C10) with (E)-beta-ocimene as the major product and with (Z)-beta-ocimene and myrcene as minor products., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23517;Q84NE5;Q8GWA8;Q8LE37;Q9FVI5", "ec_number_list": "4.2.3.106;4.2.3.46;4.2.3.15;4.2.3.105", "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0010333 terpene synthase activity;GO:0052578 alpha-farnesene synthase activity;GO:0034768 (E)-beta-ocimene synthase activity;GO:0050551 myrcene synthase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009611 response to wounding;GO:0009625 response to insect;GO:0046246 terpene biosynthetic process;GO:0009753 response to jasmonic acid;GO:0016102 diterpenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A4FVP2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JI44-1", "uniprot_id": "NDX_ARATH", "mass": 101566.0, "length": 913, "protein_name": "Nodulin homeobox", "gene_name": "NDX", "organism": "Arabidopsis", "refseq_name": "sequence-specific DNA binding transcription factor ATNDX", "refseq_ac": "NP_192218", "gene_names_uniprotkb": "NDX; AtNDX; F4C21.1; Nodulin Homeobox; T4I9.3; T4I9_3", "gene_names_refseq": "AtNDX; NDX; Nodulin Homeobox; T4I9.3; T4I9_3", "protein_names_uniprotkb": "Nodulin homeobox; AtNDX1; NDX1 homeobox protein homolog", "protein_names_refseq": "sequence-specific DNA binding transcription factor ATNDX", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G03090)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;19734295;23111157;23641115;23776212;25561503;27862469;30833711", "class_list": "", "function": "Regulates COOLAIR, a set of antisense transcripts originating from the 3' end of FLOWERING LOCUS C (FLC). Associates with single-stranded DNA that is part of an RNA-DNA hybrid, or R-loop, that covers the COOLAIR promoter. R-loop stabilization mediated by NDX inhibits COOLAIR transcription, which in turn modifies FLC expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JI45;Q7GAL2;Q9ZTA5", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005739 mitochondrion", "go_biological_process": "GO:0060195 negative regulation of antisense RNA transcription;GO:0009845 seed germination;GO:0009908 flower development;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JI44-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JUY5-1", "uniprot_id": "GAMT1_ARATH", "mass": 41564.0, "length": 376, "protein_name": "Gibberellic acid methyltransferase 1", "gene_name": "GAMT1", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": "NP_001119061", "gene_names_uniprotkb": "GAMT1; AtGAMT1; M3E9.150; M3E9_150", "gene_names_refseq": "AtGAMT1; GAMT1; M3E9.150; M3E9_150; gibberellin methyltransferase 1", "protein_names_uniprotkb": "Gibberellic acid methyltransferase 1; 2.1.1.275; Gibberellin A(9) O-methyltransferase", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26420)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;17220201;27862469", "class_list": "", "function": "Methylates the carboxyl group of several gibberellins (GAs). Substrate preference is GA9 > GA20 > GA3 > GA4 > GA34 > GA51 > GA1 > GA19 > GA12. No activity with diterpenes abietic acid and ent-kaurenoic acid., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H6L1;O65592;Q56Z47", "ec_number_list": "2.1.1.275", "go_molecular_function": "GO:0046872 metal ion binding;GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0010341 gibberellin carboxyl-O-methyltransferase activity;GO:0102117 gibberellin A9 carboxyl methyltransferase activity;GO:0008168 methyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4JUY5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MQY1-1", "uniprot_id": "NAC68_ARATH", "mass": 53599.0, "length": 473, "protein_name": "NAC domain-containing protein 68", "gene_name": "NAC68; NTM1", "organism": "Arabidopsis", "refseq_name": "NAC with transmembrane motif1", "refseq_ac": "NP_001078343", "gene_names_uniprotkb": "NAC68; NTM1; ANAC068; F11O4.4; F11O4_4; NAC with transmembrane motif1; NTL12; NTM1", "gene_names_refseq": "ANAC068; Arabidopsis NAC domain containing protein 68; F11O4.4; F11O4_4; NAC with transmembrane motif1; NTM1", "protein_names_uniprotkb": "NAC domain-containing protein 68; ANAC068; Protein NAC WITH TRANSMEMBRANE MOTIF 1; Protein NTM1-like 12", "protein_names_refseq": "NAC with transmembrane motif1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G01540)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;15029955;17098812;17158162;27862469", "class_list": "", "function": "Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVG8;O82591", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031965 nuclear membrane;GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0051302 regulation of cell division;GO:0009736 cytokinin-activated signaling pathway;GO:0009965 leaf morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A8MQY1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JS25-1", "uniprot_id": "SRFR1_ARATH", "mass": 118107.0, "length": 1052, "protein_name": "Suppressor of RPS4-RLD 1", "gene_name": "SRFR1", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": "NP_195462", "gene_names_uniprotkb": "SRFR1; F6G17.110; F6G17_110; SNC5; SUPPRESSOR OF RPS4-RLD 1", "gene_names_refseq": "F6G17.110; F6G17_110; SRFR1; SUPPRESSOR OF RPS4-RLD 1", "protein_names_uniprotkb": "Suppressor of RPS4-RLD 1; AtSNC5; Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 5", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37460)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;11910074;14593172;15469494;18774967;19525323;19649196;20466843;20862316;21079790;22158819;22223895;24689742;27862469", "class_list": "", "function": "Negative regulator of effector-triggered immunity associated with the EDS1 resistance pathway (PubMed:15469494, PubMed:18774967, PubMed:19525323, PubMed:19649196, PubMed:20862316, PubMed:21079790). May localize its interactors to a microsomal membrane (PubMed:22158819). May therefore negatively regulate RPS4 and SNC1 translocation to the nucleus (PubMed:21079790). Contributes to the regulation of RPS2 and RPS4 protein levels and negatively regulates SNC1 stability (PubMed:20862316)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GYX1;Q9SZU6", "ec_number_list": "", "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0031348 negative regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4JS25-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JHA2-1", "uniprot_id": "RSH1C_ARATH", "mass": 98690.0, "length": 884, "protein_name": "Putative GTP diphosphokinase RSH1, chloroplastic", "gene_name": "RSH1", "organism": "Arabidopsis", "refseq_name": "RELA/SPOT homolog 1", "refseq_ac": "NP_567226", "gene_names_uniprotkb": "RSH1; AT-RSH1; ATRSH1; RELA-SPOT HOMOLOG 1; SPOT HOMOLOG 1; SPOT homolog 1; T2H3.10; T2H3_10", "gene_names_refseq": "AT-RSH1; ATRSH1; RELA-SPOT HOMOLOG 1; RELA/SPOT HOMOLOG 1; RELA/SPOT homolog 1; RSH1; T2H3.10; T2H3_10", "protein_names_uniprotkb": "Putative GTP diphosphokinase RSH1, chloroplastic; 2.7.6.5; AtRSH1; RelA/SpoT homolog 1; ppGpp synthetase RSH1", "protein_names_refseq": "RELA/SPOT homolog 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;10725385;11846877;18535838;27862469", "class_list": "", "function": "May be involved in a rapid plant ppGpp (guanosine 3'-diphosphate 5'-diphosphate)-mediated response to pathogens and other stresses (By similarity). Unable to functionally complement E.coli relA mutants., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUY0;Q9M112;Q9M5P7", "ec_number_list": "2.7.6.5", "go_molecular_function": "GO:0005524 ATP binding;GO:0005525 GTP binding;GO:0016301 kinase activity;GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity;GO:0008728 GTP diphosphokinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009611 response to wounding;GO:0015969 guanosine tetraphosphate metabolic process;GO:0010150 leaf senescence;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JHA2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JQZ3-1", "uniprot_id": "REN1_ARATH", "mass": 100627.0, "length": 920, "protein_name": "Rho GTPase-activating protein REN1", "gene_name": "REN1", "organism": "Arabidopsis", "refseq_name": "Rho GTPase activation protein (RhoGAP) with PH domain-containing protein", "refseq_ac": "NP_001320057", "gene_names_uniprotkb": "REN1; F22K18.2200; F22K18.220; F22K18_220; ROP1 ENHANCER 1", "gene_names_refseq": "F22K18.220; F22K18_220; REN1; ROP1 ENHANCER 1", "protein_names_uniprotkb": "Rho GTPase-activating protein REN1; Protein ROP1 ENHANCER 1; Rho-type GTPase-activating protein REN1", "protein_names_refseq": "Rho GTPase activation protein (RhoGAP) with PH domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24580)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;19108776;22631563;23111157;23328941;27862469", "class_list": "", "function": "Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. Maintains the global inactivation of ARAC11/ROP1 at the apex in pollen tubes in order to regulate the polar cell growth., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SB53", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005938 cell cortex;GO:0045177 apical part of cell;GO:0016324 apical plasma membrane;GO:0070382 exocytic vesicle", "go_biological_process": "GO:0007165 signal transduction;GO:0043547 positive regulation of GTPase activity;GO:0035024 negative regulation of Rho protein signal transduction;GO:0009846 pollen germination;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JQZ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGW2-1", "uniprot_id": "PAM74_ARATH", "mass": 98530.0, "length": 884, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase PAM74", "gene_name": "MTH12.9; PAM74", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_001318839", "gene_names_uniprotkb": "MTH12.9; PAM74; MTH12.9; MTH12_9", "gene_names_refseq": "MTH12.9; MTH12_9", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase PAM74; 2.7.11.1; Protein PHOTOSYNTHESIS AFFECTED MUTANT 74", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59650)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;20064227;21423366;27862469;9405937", "class_list": "", "function": "Required for accurate photosynthesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 14, "predicted_n_glycosites": 12, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 14, "binding_glycan_count": 0, "secondary_ac_list": "F4KJ90;Q9FN96", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGW2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K128-1", "uniprot_id": "CHR23_ARATH", "mass": 122887.0, "length": 1064, "protein_name": "Probable ATP-dependent DNA helicase CHR23", "gene_name": "CHR23", "organism": "Arabidopsis", "refseq_name": "homeotic protein regulator", "refseq_ac": "NP_197432", "gene_names_uniprotkb": "CHR23; AtCHR23; F7K24.60; F7K24_60; MINU2; chromatin remodeling 23", "gene_names_refseq": "AtCHR23; CHR23; F7K24.60; F7K24_60; chromatin remodeling 23", "protein_names_uniprotkb": "Probable ATP-dependent DNA helicase CHR23; 3.6.4.12; AtCHR23; Protein CHROMATIN REMODELING 23; Protein MINUSCULE 2", "protein_names_refseq": "homeotic protein regulator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19310)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;14593172;16547115;23062007;24265739;24666886;24839909;25561503;27862469;28011693", "class_list": "", "function": "Probable chromatin-remodeling factor that is functionally redundant with CHR12 in root and shoot stem cell initiation and root apical meristem (RAM) and shoot apical meristem (SAM) maintenance. Can associate with the promoter region of WOX5 (PubMed:23062007). May promote seed maturation and repress initiation of germination (PubMed:24839909). May repress plant growth (PubMed:24666886)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0040029 epigenetic regulation of gene expression;GO:0031507 heterochromatin formation;GO:0009826 unidimensional cell growth;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4K128-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0SVK0-1", "uniprot_id": "DOG1_ARATH", "mass": 32470.0, "length": 291, "protein_name": "Protein DELAY OF GERMINATION 1", "gene_name": "DOG1", "organism": "Arabidopsis", "refseq_name": "delay of germination 1", "refseq_ac": "NP_001330541", "gene_names_uniprotkb": "DOG1; ATDOG1; DELAY OF GERMINATION 1; GAAS5; GLUCOSE SENSING QTL 5; GSQ5; K15I22.3; K15I22_3", "gene_names_refseq": "ATDOG1; DELAY OF GERMINATION 1; DOG1; GAAS5; GLUCOSE SENSING QTL 5; GSQ5; K15I22.3; K15I22_3; germination ability after storage 5", "protein_names_uniprotkb": "Protein DELAY OF GERMINATION 1; GLUCOSE SENSING QTL 5", "protein_names_refseq": "delay of germination 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45830)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10048488;11130714;17065317;17329563;18410483;21569772;21803937;22829147;25114251;25568310;25852712;26620523;26684465;26729600;27035986;27862469", "class_list": "", "function": "Required for the induction of seed dormancy (PubMed:17065317, PubMed:22829147, PubMed:26620523). The level of DOG1 protein in freshly harvested seeds determines the level of seed dormancy (PubMed:22829147). Determines the temperature window for germination by regulating the expression of micropylar endosperm-weakening genes through temperature control of the gibberellins metabolism (PubMed:25114251). Regulates seed dormancy and flowering time through an influence on levels of microRNAs miR156 and miR172 (PubMed:27035986). Regulator of seed maturation interfering with abscisic acid signaling components and activating ABI5 (PubMed:26729600). In cv. Cvi-1, enhances glucose induction of ABI4 (PubMed:18410483)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WQP5;Q9FJ53", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway;GO:0010162 seed dormancy process;GO:0010182 sugar mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "A0SVK0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JZW1-1", "uniprot_id": "PBL13_ARATH", "mass": 56172.0, "length": 494, "protein_name": "Serine/threonine-protein kinase PBL13", "gene_name": "PBL13", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_198408", "gene_names_uniprotkb": "PBL13; K2K18.3; K2K18_3", "gene_names_refseq": "K2K18.3; K2K18_3", "protein_names_uniprotkb": "Serine/threonine-protein kinase PBL13; 2.7.11.1; PBS1-like protein 13; Ser/Thr protein kinase ACIK1b", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10718197;11130714;16673935;20413097;24924143;26432875;27862469", "class_list": "", "function": "Involved in defense responses. Acts as a negative regulator of plant immune responses., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 44, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56YK6;Q9FH10", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0006952 defense response;GO:0050777 negative regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JZW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A9QM73-1", "uniprot_id": "SMG7_ARATH", "mass": 117006.0, "length": 1059, "protein_name": "Nonsense-mediated mRNA decay factor SMG7", "gene_name": "SMG7", "organism": "Arabidopsis", "refseq_name": "Telomerase activating protein Est1", "refseq_ac": "NP_001190336", "gene_names_uniprotkb": "SMG7; F7K24.150; F7K24_150; F7K24", "gene_names_refseq": "F7K24.150; F7K24_150; SMG7", "protein_names_uniprotkb": "Nonsense-mediated mRNA decay factor SMG7; Protein SMG7; SMG7 homolog", "protein_names_refseq": "Telomerase activating protein Est1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19400)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;18544632;21119056;22379136;22974464;23111157;24601666;25561503;27862469;28154133;29073135;29167316", "class_list": "", "function": "Plays multiple roles in growth and development. Involved in nonsense-mediated mRNA decay (NMD). May provide a link to the mRNA degradation machinery to initiate NMD and serve as an adapter for UPF proteins function. Required for meiotic progression through anaphase II of pollen mother cells. May counteract cyclin-dependent kinase (CDK) activity at the end of meiosis. May play a role in plant defense through its involvement in NMD. Together with EXA1, helps to restrict cell death induction during pathogen infection in a salicylic acid- (SA) and reactive oxygen species- (ROS) independent manner (PubMed:29073135)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 10, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 10, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 10, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0042162 telomeric DNA binding;GO:0070034 telomerase RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body;GO:0005697 telomerase holoenzyme complex", "go_biological_process": "GO:0006952 defense response;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0090306 meiotic spindle assembly;GO:0051321 meiotic cell cycle;GO:0012501 programmed cell death", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "A9QM73-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DGI8-1", "uniprot_id": "BZP63_ARATH", "mass": 34311.0, "length": 314, "protein_name": "Basic leucine zipper 63", "gene_name": "BZIP63; BZO2H3", "organism": "Arabidopsis", "refseq_name": "bZIP transcription factor family protein", "refseq_ac": "NP_001031962", "gene_names_uniprotkb": "BZIP63; BZO2H3; AtbZIP63; BZO2H3; T32B20.4; T32B20_4", "gene_names_refseq": "Arabidopsis thaliana basic leucine zipper 63; AtbZIP63; BZO2H3; T32B20.4; T32B20_4", "protein_names_uniprotkb": "Basic leucine zipper 63; AtbZIP63; Basic leucine zipper O2 homolog 3; Basic leucine zipper OPAQUE 2 homolog 3; bZIP protein 63", "protein_names_refseq": "bZIP transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G28770)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "11130714;11906833;12569427;12657652;14593172;15469500;16709202;16731568;16810321;16957775;18841482;19423640;20047775;20080816;23572148;25561503;26091701;26263501;27862469;28011693;29348240;30833711", "class_list": "", "function": "Transcription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KA11;Q712P1;Q940U4;Q9FUD2;Q9LKT9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0046982 protein heterodimerization activity;GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0071333 cellular response to glucose stimulus;GO:0009267 cellular response to starvation;GO:0009649 entrainment of circadian clock;GO:0071215 cellular response to abscisic acid stimulus", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "B9DGI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DGD6-1", "uniprot_id": "ACS_ARATH", "mass": 81889.0, "length": 743, "protein_name": "Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal", "gene_name": "ACS", "organism": "Arabidopsis", "refseq_name": "acetyl-CoA synthetase", "refseq_ac": "NP_001031974", "gene_names_uniprotkb": "ACS; F5H8.15; acetyl-CoA synthetase", "gene_names_refseq": "ACS; acetyl-CoA synthetase", "protein_names_uniprotkb": "Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal; 6.2.1.1; Acetate--CoA ligase; Acetyl-CoA synthetase", "protein_names_refseq": "acetyl-CoA synthetase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G36880)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "10859180;11130714;12051672;12805634;14581625;14593172;18433157;18463617;19245862;19376835;19423640;20466843;21768351;22438062;23111157;23328941;23572148;23660473;23776212;23820729;24924143;25561503;26091701;26187819;27419465;27862469;28011693;29167316;30833711", "class_list": "", "function": "Catalyzes the production of acetyl-CoA, an activated form of acetate that can be used for lipid synthesis or for energy generation. May play a limited role in the biosynthesis of lipids., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49063;Q9LTG4", "ec_number_list": "6.2.1.1;6.2.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0016208 AMP binding;GO:0003987 acetate-CoA ligase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009514 glyoxysome;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006083 acetate metabolic process;GO:0006631 fatty acid metabolic process;GO:0006085 acetyl-CoA biosynthetic process;GO:0019427 acetyl-CoA biosynthetic process from acetate", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "B9DGD6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JZG9-1", "uniprot_id": "TERC_ARATH", "mass": 41900.0, "length": 384, "protein_name": "Thylakoid membrane protein TERC, chloroplastic", "gene_name": "PDE149; TERC", "organism": "Arabidopsis", "refseq_name": "integral membrane TerC family protein", "refseq_ac": "NP_001331346", "gene_names_uniprotkb": "PDE149; TERC; ATTERC; MXC9.9; MXC9_9; PDE149; PIGMENT DEFECTIVE 149; TELLURITE RESISTANCE C", "gene_names_refseq": "ATTERC; MXC9.9; MXC9_9; PDE149; PIGMENT DEFECTIVE 149; TELLURITE RESISTANCE C", "protein_names_uniprotkb": "Thylakoid membrane protein TERC, chloroplastic; AtTerC; Protein PIGMENT DEFECTIVE 149; Protein TELLURITE RESISTANCE C", "protein_names_refseq": "integral membrane TerC family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G12130)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;18429937;24612058;25561503;27862469;29654922;9501997", "class_list": "", "function": "Integral thylakoid membrane protein that plays a crucial role in thylakoid membrane biogenesis and thylakoid formation in early chloroplast development (PubMed:18429937). Is essential for de novo synthesis of photosystem II (PSII) core proteins and required for efficient insertion of thylakoid membrane proteins, presumably via interaction with ALB3. May assist synthesis of thylakoid membrane proteins at the membrane insertion step (PubMed:24612058)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCU5;Q8VY96;Q9FMP9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009534 chloroplast thylakoid;GO:0016020 membrane", "go_biological_process": "GO:0010027 thylakoid membrane organization;GO:0090351 seedling development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JZG9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B6EUB3-1", "uniprot_id": "PDS5A_ARATH", "mass": 181210.0, "length": 1605, "protein_name": "Sister chromatid cohesion protein PDS5 homolog A", "gene_name": "PDS5A", "organism": "Arabidopsis", "refseq_name": "binding protein", "refseq_ac": "NP_001119390", "gene_names_uniprotkb": "PDS5A; MNJ7.28", "gene_names_refseq": "", "protein_names_uniprotkb": "Sister chromatid cohesion protein PDS5 homolog A; AtPDS5A; PDS5; Precocious dissociation of sisters protein 5-A", "protein_names_refseq": "binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47690)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "10048488;11130714;17272265;18433157;18463617;19245862;19376835;20466843;21768351;22060019;22440515;23111157;23328941;23572148;23660473;23776212;23820729;24924143;25387881;25561503;26091701;26187819;26648949;27419465;27532006;27862469;30833711", "class_list": "", "function": "Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949)., [UniProtKB, PubMed, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 38, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H5K3;Q0WNL7;Q9FIL0", "ec_number_list": "", "go_molecular_function": "GO:0140670 cohesin unloader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0000785 chromatin;GO:0009536 plastid", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0007064 mitotic sister chromatid cohesion;GO:0035825 homologous recombination", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "B6EUB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFX7-1", "uniprot_id": "HMA8_ARATH", "mass": 94260.0, "length": 883, "protein_name": "Copper-transporting ATPase PAA2, chloroplastic", "gene_name": "PAA2", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_001031920", "gene_names_uniprotkb": "PAA2; ATHMA8; F13M11; HEAVY METAL ATPASE 8; HMA8; P-type ATPase of Arabidopsis 2; T6G21", "gene_names_refseq": "ARABIDOPSIS HEAVY METAL ATPASE 8; ATHMA8; HEAVY METAL ATPASE 8; HMA8; P-type ATPase of Arabidopsis 2; PAA2", "protein_names_uniprotkb": "Copper-transporting ATPase PAA2, chloroplastic; 7.2.2.9; Protein HEAVY METAL ATPASE 8", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21930)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;15772282;19423640;27862469", "class_list": "", "function": "Mediates copper transfer across the chloroplast thylakoid membrane. Required for copper delivery into the thylakoids lumen, which is essential for the function of copper proteins., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7Y051;Q9C594", "ec_number_list": "7.2.2.9", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0005507 copper ion binding;GO:0005375 copper ion transmembrane transporter activity;GO:0043682 P-type divalent copper transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006825 copper ion transport;GO:0055070 copper ion homeostasis;GO:0009767 photosynthetic electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B9DFX7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFS6-1", "uniprot_id": "SNX2B_ARATH", "mass": 64282.0, "length": 572, "protein_name": "Sorting nexin 2B", "gene_name": "SNX2B", "organism": "Arabidopsis", "refseq_name": "sorting nexin 2B", "refseq_ac": "NP_001331853", "gene_names_uniprotkb": "SNX2B; SNX2b; T28J14.60; T28J14_60; sorting nexin 2B", "gene_names_refseq": "SNX2b; T28J14.60; T28J14_60; sorting nexin 2B", "protein_names_uniprotkb": "Sorting nexin 2B", "protein_names_refseq": "sorting nexin 2B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07120)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "11130714;14555783;16582012;18463617;19376835;19423640;19825596;20466843;21156856;21768351;23111157;23172892;23572148;23660473;23776212;25561503;26091701;27419465;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Plays a role in vesicular protein sorting. Acts at the crossroads between the secretory and endocytic pathways. Is involved in the endosome to vacuole protein transport and, as component of the membrane-associated retromer complex, is also involved in endosome-to-Golgi retrograde transport., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLC3;Q570X1;Q9LYQ3", "ec_number_list": "", "go_molecular_function": "GO:0005543 phospholipid binding;GO:0046982 protein heterodimerization activity;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0016020 membrane;GO:0032585 multivesicular body membrane", "go_biological_process": "GO:0015031 protein transport;GO:0032502 developmental process;GO:0016192 vesicle-mediated transport;GO:0051604 protein maturation;GO:0045324 late endosome to vacuole transport", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "B9DFS6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JW79-1", "uniprot_id": "RDM3_ARATH", "mass": 158039.0, "length": 1493, "protein_name": "Protein RNA-directed DNA methylation 3", "gene_name": "KTF1; RDM3", "organism": "Arabidopsis", "refseq_name": "kow domain-containing transcription factor 1", "refseq_ac": "NP_196049", "gene_names_uniprotkb": "KTF1; RDM3; KTF1; SPT5-LIKE; SPT5L; T19N18.20; T19N18_20", "gene_names_refseq": "KTF1; SPT5-LIKE; SPT5L; T19N18.20; T19N18_20; kow domain-containing transcription factor 1", "protein_names_uniprotkb": "Protein RNA-directed DNA methylation 3; KOW domain-containing transcription factor 1; Protein SPT5-like", "protein_names_refseq": "kow domain-containing transcription factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04290)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;19343051;19410546;21150311;21738482;22060019;25561503;27862469;30833711", "class_list": "", "function": "Effector of RNA-directed DNA methylation (RdDM) triggered by small interfering RNAs (siRNAs, 24-nt RNAs). Functions as an adapter protein that binds scaffold transcripts generated by polymerase V and recruits AGO4 and AGO4-bound siRNAs to form an RdDM effector complex (PubMed:19343051, PubMed:19410546). Promotes the expression of 24-nt RNAs (PubMed:19343051). Required for the initial establishment of DNA methylation (PubMed:21150311). Together with AGO4, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci (PubMed:21738482)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0032044 DSIF complex;GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0006368 transcription elongation by RNA polymerase II;GO:0030422 siRNA processing;GO:0032784 regulation of DNA-templated transcription elongation;GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JW79-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGU5-1", "uniprot_id": "CIK4_ARATH", "mass": 68206.0, "length": 614, "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 4", "gene_name": "CIK4", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_199390", "gene_names_uniprotkb": "CIK4; MRA19.22; MRA19_22", "gene_names_refseq": "MRA19.22; MRA19_22", "protein_names_uniprotkb": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 4; 2.7.11.1; Probable LRR receptor-like serine/threonine-protein kinase CIK4", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45780)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;20064227;27862469;29581511;34651321;9734815", "class_list": "", "function": "Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9FK65", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0015026 coreceptor activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0048653 anther development;GO:0007639 homeostasis of number of meristem cells", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGU5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JXF1-1", "uniprot_id": "GAF1_ARATH", "mass": 64079.0, "length": 581, "protein_name": "Protein GAMETOPHYTE DEFECTIVE 1", "gene_name": "GAF1", "organism": "Arabidopsis", "refseq_name": "Polymerase/histidinol phosphatase-like protein", "refseq_ac": "NP_200806", "gene_names_uniprotkb": "GAF1; AtRPP30; GAMETOPHYTE DEFECTIVE 1; MMN10.23; MMN10_23; RPP30", "gene_names_refseq": "AtRPP30; GAF1; GAMETOPHYTE DEFECTIVE 1; MMN10.23; MMN10_23; RPP30", "protein_names_uniprotkb": "Protein GAMETOPHYTE DEFECTIVE 1; 3.1.26.-; AtRPP30; Probable ribonuclease P protein subunit p30; RNaseP protein p30", "protein_names_refseq": "Polymerase/histidinol phosphatase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59980)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;22509260;25561503;27862469;29654922;30833711;9872454", "class_list": "", "function": "Probable component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). May also be a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences (By similarity). Required for female gametophyte development and male competence (PubMed:22509260)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJD9", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005655 nucleolar ribonuclease P complex;GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0008033 tRNA processing;GO:0006364 rRNA processing;GO:0009553 embryo sac development;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JXF1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGU1-1", "uniprot_id": "Y5374_ARATH", "mass": 106058.0, "length": 959, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g37450", "gene_name": "T25O11.15; T25O11_15", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_198561", "gene_names_uniprotkb": "T25O11.15; T25O11_15", "gene_names_refseq": "T25O11.15; T25O11_15", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At5g37450; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G37450)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;20064227;22060019;27862469", "class_list": "", "function": "", "predicted_glycosites": 11, "predicted_n_glycosites": 11, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "F4K767;Q9FG43", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0045088 regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "C0LGU1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IH31-1", "uniprot_id": "CAN2_ARATH", "mass": 37298.0, "length": 332, "protein_name": "Staphylococcal-like nuclease CAN2", "gene_name": "ATCAN2; CAN2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "ATCAN2; CAN2; AtCaN2; CAN2; Ca2+-dependent nuclease; T3G21.18; T3G21_18; calcium dependent nuclease 2", "gene_names_refseq": "", "protein_names_uniprotkb": "Staphylococcal-like nuclease CAN2; 3.1.31.-; AtCAN2; Ca(2+)-dependent nuclease 2; Calcium-dependent nuclease 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40410)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;14993207;22450164;23102437;24076026;27862469", "class_list": "", "function": "Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RWK9;Q9SIY4", "ec_number_list": "", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004520 DNA endonuclease activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006308 DNA catabolic process;GO:0006401 RNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4IH31-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGL4-1", "uniprot_id": "Y2289_ARATH", "mass": 98965.0, "length": 880, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g28960", "gene_name": "T9I4.4; T9I4_4", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_180462", "gene_names_uniprotkb": "T9I4.4; T9I4_4", "gene_names_refseq": "T9I4.4; T9I4_4", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At2g28960; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28960)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 9, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "O81066", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "C0LGL4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JYC8-1", "uniprot_id": "PTM_ARATH", "mass": 189210.0, "length": 1706, "protein_name": "DDT domain-containing protein PTM", "gene_name": "PTM", "organism": "Arabidopsis", "refseq_name": "PHD type transcription factor with transmembrane domain protein (PTM)", "refseq_ac": "NP_198371", "gene_names_uniprotkb": "PTM; DDP1; K3D20.8; T25C13.90; T25C13_90", "gene_names_refseq": "PHD type transcription factor with transmembrane domains; PTM; T25C13.90; T25C13_90", "protein_names_uniprotkb": "DDT domain-containing protein PTM; DDT domain-containing protein 1; Membrane-bound transcription factor PTM; PHD type transcription factor with transmembrane domains", "protein_names_refseq": "PHD type transcription factor with transmembrane domain protein (PTM)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35210)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;21934661;23691993;25561503;27862469", "class_list": "", "function": "Membrane-bound transcription factor required for the plastid-to-nucleus retrograde signaling. Functions in multiple retrograde pathways. The plastid-to-nucleus signal plays an important role in the coordinated expression of both nuclear- and chloroplast-localized genes that encode photosynthesis-related proteins. In the nucleus, activates ABI4 transcription in a PHD-dependent manner associated with histone modifications. Localized primarily in the chloroplast outer membrane as dormant form and, in response to retrograde signals, is released from the membrane through proteolytic cleavage and its cleaved fragment containing the transcription factor domain is redistributed to the nucleus, where it regulates the expression of particular nuclear genes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JYC9;Q56XE1;Q9LHR7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0031010 ISWI-type complex;GO:0009707 chloroplast outer membrane;GO:0009941 chloroplast envelope;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006508 proteolysis;GO:0045893 positive regulation of DNA-templated transcription;GO:0010019 chloroplast-nucleus signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JYC8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HX15-1", "uniprot_id": "LPAI_ARATH", "mass": 145222.0, "length": 1309, "protein_name": "Phospholipase A I", "gene_name": "PLA1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "PLA1; F8K4.6; F8K4_6", "gene_names_refseq": "", "protein_names_uniprotkb": "Phospholipase A I; 3.1.1.-; AtPLA1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G61850)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12226489;17475618;27862469", "class_list": "", "function": "Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Catalyzes the hydrolysis of the galactolipids monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol (DGDG), and less efficiently the phoshpolipids phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), phosphatidylserine (PS) and phosphatidylinositol (PI). Hydrolyzes phospholipids at both the sn-1 and sn-2 positions. Involved in basal jasmonic acid production and promotes resistance to the necrotrophic fungal pathogen Botrytis cinerea., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O80693", "ec_number_list": "", "go_molecular_function": "GO:0004620 phospholipase activity;GO:0047372 monoacylglycerol lipase activity;GO:0047714 galactolipase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0016042 lipid catabolic process;GO:0009620 response to fungus;GO:0050832 defense response to fungus;GO:0009695 jasmonic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4HX15-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JCX9-1", "uniprot_id": "LNK2_ARATH", "mass": 73593.0, "length": 663, "protein_name": "Protein LNK2", "gene_name": "LNK2", "organism": "Arabidopsis", "refseq_name": "agglutinin-like protein", "refseq_ac": "NP_001190089", "gene_names_uniprotkb": "LNK2; T14E10.70", "gene_names_refseq": "LNK2; night light-inducible and clock-regulated 2", "protein_names_uniprotkb": "Protein LNK2; Night light-inducible and clock-regulated 2", "protein_names_refseq": "agglutinin-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54500)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;23818596;24690904;25012192;25561503;25848001;25848708;27862469;28011693", "class_list": "", "function": "Transcriptional coactivator necessary for expression of the clock genes PRR5 and TOC1 (PubMed:25012192, PubMed:25848708). Antagonizes REV8 function in the regulation of anthocyanin accumulation (PubMed:25848001). Involved in red light input to the clock (PubMed:25012192). Activates clock-controlled genes with afternoon peak (PubMed:23818596). Mediates light inhibition of hypocotyl elongation (PubMed:23818596). Unable to bind to DNA, but recruited to the evening element (EE)-containing region of the PRR5 and TOC1 promoters through its interaction with the DNA binding proteins REV8 and REV4 (PubMed:25012192, PubMed:25848708)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LQ06;A0A1I9LQ07;F4JCX8;F4JCY0;F4JCY1;Q9M1H7", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0032922 circadian regulation of gene expression;GO:0009649 entrainment of circadian clock;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JCX9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JSE7-1", "uniprot_id": "EDR2_ARATH", "mass": 81847.0, "length": 718, "protein_name": "Protein ENHANCED DISEASE RESISTANCE 2", "gene_name": "EDR2", "organism": "Arabidopsis", "refseq_name": "ENHANCED DISEASE RESISTANCE 2", "refseq_ac": "NP_001190769", "gene_names_uniprotkb": "EDR2; ENHANCED DISEASE RESISTANCE 2; F13C5.210; F13C5_210", "gene_names_refseq": "EDR2; ENHANCED DISEASE RESISTANCE 2; F13C5.210; F13C5_210", "protein_names_uniprotkb": "Protein ENHANCED DISEASE RESISTANCE 2", "protein_names_refseq": "ENHANCED DISEASE RESISTANCE 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19040)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;14593172;14993207;16212604;17317660;17612410;20466843;23111157;25561503;27532006;27862469;28011693;30833711", "class_list": "", "function": "Negative regulator of the salicylic acid- (SA-) mediated resistance to pathogens, including the biotrophic powdery mildew pathogens Golovinomyces cichoracearum and Blumeria graminis, and the downy mildew pathogen Hyaloperonospora parasitica, probably by limiting the initiation of cell death and the establishment of the hypersensitive response (HR). Prevents ethylene-induced senescence. Binds to phosphatidylinositol-4-phosphate (PtdIns(4)P) in vitro., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H6R3;F4JSE6;O49417;Q56W91", "ec_number_list": "", "go_molecular_function": "GO:0070273 phosphatidylinositol-4-phosphate binding;GO:0008289 lipid binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0009751 response to salicylic acid;GO:0009626 plant-type hypersensitive response;GO:0009723 response to ethylene;GO:0009873 ethylene-activated signaling pathway;GO:1900056 negative regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4JSE7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0JQ18-1", "uniprot_id": "SOP14_ARATH", "mass": 7777.0, "length": 73, "protein_name": "Serine rich endogenous peptide 14", "gene_name": "PROSCOOP14", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_173702", "gene_names_uniprotkb": "PROSCOOP14; F19G10.22; SCOOP14; STMP2", "gene_names_refseq": "F19G10.22; F19G10_22", "protein_names_uniprotkb": "Serine rich endogenous peptide 14; AtSCOOP14; Phytocytokine SCOOP14; Precursor of serine rich endogenous peptide phytocytokine 14; Secreted transmembrane peptide 2", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22890)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;19423640;27862469;30715439;31001913;33514716;34535661", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:31001913, PubMed:33514716, PubMed:34535661). Inhibits root growth and regulates root meristems (PubMed:31001913, PubMed:34535661). Prevents general growth and development (PubMed:31001913). Exhibits antibacterial effects against Pseudomonas syringae pv. tomato DC3000, Ralstonia solanacearum, Bacillus subtilis and Agrobacterium tumefaciens, thus being an antimicrobial peptide (AMP) (PubMed:31001913)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0006952 defense response;GO:0009409 response to cold;GO:0009617 response to bacterium;GO:0009651 response to salt stress;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0JQ18-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0MES8-1", "uniprot_id": "ABI4_ARATH", "mass": 35671.0, "length": 328, "protein_name": "Ethylene-responsive transcription factor ABI4", "gene_name": "ABI4", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": "NP_181551", "gene_names_uniprotkb": "ABI4; ERF052; GIN6; ISI3; SAN5; SIS5; SUN6; T7M7.16", "gene_names_refseq": "ABA INSENSITIVE 4; ABI4; ABSCISIC ACID-INSENSITIVE PROTEIN 4; ATABI4; GIN6; GLUCOSE INSENSITIVE 6; IMPAIRED SUCROSE INDUCTION 3; ISI3; SALOBRENO 5; SAN5; SIS5; SUCROSE UNCOUPLED 6; SUGAR-INSENSITIVE 5; SUN6; T7M7.16", "protein_names_uniprotkb": "Ethylene-responsive transcription factor ABI4; ERF ABI4; Protein ABSCISIC ACID INSENSITIVE 4; Protein GLUCOSE INSENSITIVE 6; Protein IMPAIRED SUCROSE INDUCTION 3; Protein SALOBRENO 5; Protein SUCROSE UNCOUPLED 6; Protein SUGAR INSENSITIVE 5", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40220)", "pathway_count": 1, "publication_count": 31, "publication_id_list": "10207155;10617197;10629000;10950871;10972884;10972885;11115891;11172073;11439129;11851911;11996676;12136027;12529517;12857824;12970489;15053765;15118859;15502012;16098105;16113213;16339784;16407444;16844907;17031512;17147637;17267444;24451981;27862469;9144963;9418043;9634591", "class_list": "", "function": "Transcription regulator that probably binds to the GCC-box pathogenesis-related promoter element. Also binds to the S-box (5'-CACTTCCA-3') photosynthesis-associated nuclear genes-related (PhANGs-related) promoter element, and thus acts as a transcription inhibitor. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. May have a function in the deetiolation process. Confers sensitivity to abscisic acid (ABA), and regulates the ABA signaling pathway during seed germination, upon nitrate-mediated lateral root inhibition, in hexokinase-dependent sugar responses (including feed-back regulation of photosynthesis and mobilization of storage lipid during germination), and in response to osmotic stress mediated by NaCl, KCl or mannitol. Plays a role in sucrose sensing or signaling, especially at low fluence far red light. Also involved in plant response to glucose treatment, especially at low concentration and in young seedlings. Required for the trehalose-mediated root inhibition and starch accumulation in cotyledons, probably by inhibiting starch breakdown. However, does not seem to be involved in sugar-mediated senescence. Required for the ABA-dependent beta-amino-butyric acid (BABA) signaling pathway. BABA primes ABA synthesis and promotes resistance to drought and salt, and leads to a prime callose accumulation that confers resistance against necrotrophic pathogens such as A.brassicicola and P.cucumerina. Seems to be involved in resistance to S.sclerotiorum probably by regulating the ABA-mediated stomatal closure apparently by antagonistic interaction with oxalate. Negative regulator of low water potential-induced Pro accumulation whose effect is decreased by high levels of sugar., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81138;Q6J9N5", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0005983 starch catabolic process;GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006970 response to osmotic stress;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 3.2, "record_id": "A0MES8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1A6H3-1", "uniprot_id": "RBSK_ARATH", "mass": 40189.0, "length": 379, "protein_name": "Ribokinase", "gene_name": "RBSK", "organism": "Arabidopsis", "refseq_name": "pfkB-like carbohydrate kinase family protein", "refseq_ac": "NP_173159", "gene_names_uniprotkb": "RBSK; F20D23.14; F20D23_14", "gene_names_refseq": "F20D23.14; F20D23_14", "protein_names_uniprotkb": "Ribokinase; 2.7.1.15; AtRBSK; RK", "protein_names_refseq": "pfkB-like carbohydrate kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17160)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;27601466;27862469", "class_list": "", "function": "Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (By similarity) (PubMed:27601466). Can also use xylose and fructose as carbohydrate substrates with a low efficiency (PubMed:27601466). Can use GTP, and, to a lower extent, CTP and UTP as alternative phosphoryl donors (PubMed:27601466)., [UniProtKB, PubMed, HAMAP, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHH5", "ec_number_list": "2.7.1.15", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004747 ribokinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009116 nucleoside metabolic process;GO:0019303 D-ribose catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A1A6H3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2RVJ8-1", "uniprot_id": "HIT4_ARATH", "mass": 50517.0, "length": 434, "protein_name": "Protein HEAT INTOLERANT 4", "gene_name": "HIT4", "organism": "Arabidopsis", "refseq_name": "myosin-H heavy protein", "refseq_ac": "NP_196563", "gene_names_uniprotkb": "HIT4; T31P16.7", "gene_names_refseq": "HEAT INTOLERANT 4; HIT4; T31P16.7; T31P16_7", "protein_names_uniprotkb": "Protein HEAT INTOLERANT 4", "protein_names_refseq": "myosin-H heavy protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10010)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10048488;17272265;19376835;22438062;23408827;23572148;23820729;25329561;25561503;26091701;27862469;30833711", "class_list": "", "function": "Essential protein required for basal thermotolerance, especially during heat-induced chromocentre decondensation, thus regulating transcriptional gene silencing (TGS)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FIA6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0010369 chromocenter", "go_biological_process": "GO:1900034 regulation of cellular response to heat;GO:0009408 response to heat;GO:0045814 negative regulation of gene expression, epigenetic;GO:0010286 heat acclimation;GO:0031452 negative regulation of heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A2RVJ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A3EWL3-1", "uniprot_id": "REV1_ARATH", "mass": 122233.0, "length": 1105, "protein_name": "Translesion synthesis protein REV1", "gene_name": "REV1", "organism": "Arabidopsis", "refseq_name": "DNA-directed DNA polymerase", "refseq_ac": "NP_001119373", "gene_names_uniprotkb": "REV1; K23L20.9; T19K24.14", "gene_names_refseq": "ARABIDOPSIS THALIANA HOMOLOG OF REVERSIONLESS 1; ATREV1; K23L20.9; K23L20_9; REV1", "protein_names_uniprotkb": "Translesion synthesis protein REV1; 2.7.7.-; AtREV1; Rev1-like terminal deoxycytidyl transferase; Template-dependent deoxycytidyl transferase REV1", "protein_names_refseq": "DNA-directed DNA polymerase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44750)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10048488;11130714;14593172;15908599;17827267;18339443;21030509;21455019;27862469", "class_list": "", "function": "Deoxycytidyl transferase involved in DNA damage tolerance (DDT) and translesion synthesis (TLS). Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. Also mediates the insertion of dTMP or dGMP when the opposite base is G, and, with a low efficiency, dGMP insertions opposite G, T, and C, dAMP insertions opposite G, A, and T, and dTMP insertion opposite A. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (e.g. UV and gamma ray), mostly via G to T transversions, and of spontaneous mutations in somatic cells. Confers resistance to ultraviolet-B (UV-B) and various DNA cross-linkers (e.g. mitomycin C MMC and cisplatin). Promotes stem growth., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3EWL4;A3EWL5;A3EWL6;A3EWL7;A3EWL8;O48585;Q5FBB9;Q8RXL1", "ec_number_list": "", "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0060090 molecular adaptor activity;GO:0046872 metal ion binding;GO:0003684 damaged DNA binding;GO:0017125 deoxycytidyl transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0035861 site of double-strand break", "go_biological_process": "GO:0006281 DNA repair;GO:0006974 DNA damage response;GO:0042276 error-prone translesion synthesis;GO:0010224 response to UV-B;GO:0070987 error-free translesion synthesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "A3EWL3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A3KPF2-1", "uniprot_id": "ANM14_ARATH", "mass": 58857.0, "length": 528, "protein_name": "Probable histone-arginine methyltransferase 1.4", "gene_name": "PRMT14", "organism": "Arabidopsis", "refseq_name": "protein arginine methyltransferase 4A", "refseq_ac": "NP_199713", "gene_names_uniprotkb": "PRMT14; CARM1B; K19E20.17; PRMT4A", "gene_names_refseq": "ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4A; ATPRMT4A; K19E20.17; K19E20_17; PRMT4A; protein arginine methyltransferase 4A", "protein_names_uniprotkb": "Probable histone-arginine methyltransferase 1.4; 2.1.1.319; AtPRMT14; AtPRMT4A; Coactivator-associated methyltransferase 1B; Protein arginine N-methyltransferase 4A", "protein_names_refseq": "protein arginine methyltransferase 4A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49020)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10470850;14593172;22223895;27862469", "class_list": "", "function": "Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, and mRNA stability. Recruited to promoters upon gene activation, methylates histone H3 and activates transcription via chromatin remodeling., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E8E0;Q84WN5;Q9FI68", "ec_number_list": "2.1.1.319", "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity;GO:0016274 protein-arginine N-methyltransferase activity;GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity;GO:0035241 protein-arginine omega-N monomethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A3KPF2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A4GNA8-1", "uniprot_id": "PSD3_ARATH", "mass": 70352.0, "length": 635, "protein_name": "Phosphatidylserine decarboxylase proenzyme 3", "gene_name": "PSD3", "organism": "Arabidopsis", "refseq_name": "phosphatidylserine decarboxylase 3", "refseq_ac": "NP_567736", "gene_names_uniprotkb": "PSD3; F20B18.80", "gene_names_refseq": "F20B18.80; F20B18_80; PSD3; phosphatidylserine decarboxylase 3", "protein_names_uniprotkb": "Phosphatidylserine decarboxylase proenzyme 3; 4.1.1.65", "protein_names_refseq": "phosphatidylserine decarboxylase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25970)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;17449644;22223895;23572148;23660473;24601666;25561503;26091701;27419465;27862469;29167316;30833711", "class_list": "", "function": "Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production., [UniProtKB, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZH1", "ec_number_list": "4.1.1.65", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004609 phosphatidylserine decarboxylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016540 protein autoprocessing;GO:0006646 phosphatidylethanolamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A4GNA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A4GSN8-1", "uniprot_id": "NUA_ARATH", "mass": 237040.0, "length": 2093, "protein_name": "Nuclear-pore anchor", "gene_name": "NUA", "organism": "Arabidopsis", "refseq_name": "nuclear pore anchor", "refseq_ac": "NP_001185435", "gene_names_uniprotkb": "NUA; TPR; YUP8H12R.11; YUP8H12R.12; YUP8H12R.8; YUP8H12R.9", "gene_names_refseq": "AtTPR; NUA; TRANSLOCATED PROMOTER REGION; YUP8H12R.12; YUP8H12R_12; nuclear pore anchor", "protein_names_uniprotkb": "Nuclear-pore anchor; AtTPR; Protein TRANSLOCATED PROMOTER REGION", "protein_names_refseq": "nuclear pore anchor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79280)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "11130712;17513499;17535820;18433157;18463617;19253305;19341826;19376835;19704557;19704774;20466843;20872268;21189294;21768351;22457071;22631563;23111157;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Component of the nuclear pore complex. Acts as a docking site for activities required for desumoylation and mRNA export. Required for the proper expression or localization of a subset of miRNAs. Plays a role in meristematic cell division by interacting with spindle assembly checkpoint proteins., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 22, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IDK8;F4IDK9;O64521;O64522;O64524;O64525;Q8H7F1", "ec_number_list": "", "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005643 nuclear pore;GO:0005730 nucleolus;GO:0005739 mitochondrion", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0006406 mRNA export from nucleus;GO:0033234 negative regulation of protein sumoylation;GO:0006606 protein import into nucleus;GO:0009910 negative regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "A4GSN8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A5HEI1-1", "uniprot_id": "SCC2_ARATH", "mass": 206759.0, "length": 1846, "protein_name": "Sister chromatid cohesion protein SCC2", "gene_name": "SCC2", "organism": "Arabidopsis", "refseq_name": "PHD finger family protein", "refseq_ac": "NP_001190317", "gene_names_uniprotkb": "SCC2; EMB2773; T20K14.150", "gene_names_refseq": "ARABIDOPSIS THALIANA SISTER-CHROMATID COHESION 2; ATSCC2; EMB2773; EMBRYO DEFECTIVE 2773; SCC2; SISTER-CHROMATID COHESION 2; T20K14.150; T20K14_150", "protein_names_uniprotkb": "Sister chromatid cohesion protein SCC2; AtSCC2; Protein EMBRYO DEFECTIVE 2773; Protein SISTER-CHROMATID COHESION 2", "protein_names_refseq": "PHD finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15540)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;15266054;19228337;19533160;23820729;27862469;28137757", "class_list": "", "function": "Essential protein required for cell fate determination during embryogenesis (PubMed:15266054, PubMed:19228337, PubMed:28137757). Involved in sister chromatid cohesion during meiosis and mitosis (PubMed:19228337, PubMed:19533160). Forms a complex with SCC4, which is required for the association of the cohesin complex with chromosomes (PubMed:28137757). Plays a structural role in chromatin, especially in centromere organization, chromosomal axis formation, and distribution of the cohesin subunit SCC3 on chromosomes (PubMed:19228337)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A7UDC4;F4K9U3;Q9LF28", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0008270 zinc ion binding;GO:0061775 cohesin loader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0090694 Scc2-Scc4 cohesin loading complex", "go_biological_process": "GO:0007059 chromosome segregation;GO:0051301 cell division;GO:0010468 regulation of gene expression;GO:0034087 establishment of mitotic sister chromatid cohesion;GO:0051321 meiotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A5HEI1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A7WM73-1", "uniprot_id": "HEXO1_ARATH", "mass": 61230.0, "length": 541, "protein_name": "Beta-hexosaminidase 1", "gene_name": "HEXO1", "organism": "Arabidopsis", "refseq_name": "beta-hexosaminidase 1", "refseq_ac": "NP_567017", "gene_names_uniprotkb": "HEXO1; HEX2; T26I12.140", "gene_names_refseq": "ATHEX2; HEXO1; beta-hexosaminidase 1", "protein_names_uniprotkb": "Beta-hexosaminidase 1; 3.2.1.52; AtHEX2; Beta-GlcNAcase 1; Beta-N-acetylhexosaminidase 1; Beta-hexosaminidase 2; N-acetyl-beta-glucosaminidase 1", "protein_names_refseq": "beta-hexosaminidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55260)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;17636254;17644627;21252225;27862469", "class_list": "", "function": "Has a broad substrate specificity. Can use synthetic substrates such as pyridylaminated chitotriose, pyridylaminated chitobiose, p-nitrophenyl-beta-N-acetylglucosaminide, p-nitrophenyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (pNP-GlcNAc), p-nitrophenyl-2-acetamido-2-deoxy-beta-D-galactopyranoside (pNP-GalNAc), 4-methylumbelliferyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc), and 4-methylumbelliferyl-6-sulfo-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc-6SO(4)) as substrates. Removes terminal GlcNAc residues from alpha1,3- and alpha1,6-mannosyl branches of biantennary N-glycans without any strict branch preference. Required for the presence of paucimannosidic N-glycans in glycoproteins of roots and, to a lower extent, of leaves., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 5, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUA8;Q8LFK0;Q9M3C5", "ec_number_list": "", "go_molecular_function": "GO:0015929 hexosaminidase activity;GO:0004563 beta-N-acetylhexosaminidase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0016020 membrane;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009507 chloroplast", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0030203 glycosaminoglycan metabolic process;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A7WM73-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A7XDQ9-1", "uniprot_id": "B3GTK_ARATH", "mass": 77912.0, "length": 684, "protein_name": "Hydroxyproline O-galactosyltransferase GALT2", "gene_name": "GALT2", "organism": "Arabidopsis", "refseq_name": "Galactosyltransferase family protein", "refseq_ac": "NP_001154260", "gene_names_uniprotkb": "GALT2; AGP galactosyltransferase 2; AtGALT2; B3GALT20; T13K14.220; T13K14_220", "gene_names_refseq": "AGP galactosyltransferase 2; AtGALT2; GALT2; T13K14.220; T13K14_220", "protein_names_uniprotkb": "Hydroxyproline O-galactosyltransferase GALT2; 2.4.1.-; AtGALT2; Beta-1,3-galactosyltransferase 20", "protein_names_refseq": "Galactosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21060)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;17630273;18548197;23430255;25974423;26690932;26731606;27862469", "class_list": "", "function": "Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q9SUA8", "ec_number_list": "", "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0035250 UDP-galactosyltransferase activity;GO:1990714 hydroxyproline O-galactosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0012505 endomembrane system", "go_biological_process": "GO:0006493 protein O-linked glycosylation;GO:0010208 pollen wall assembly;GO:0010405 arabinogalactan protein metabolic process;GO:0080147 root hair cell development;GO:0180062 protein O-linked glycosylation via galactose", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A7XDQ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MQA5-1", "uniprot_id": "ESF13_ARATH", "mass": 10283.0, "length": 90, "protein_name": "EMBRYO SURROUNDING FACTOR 1.3", "gene_name": "ESF1.3", "organism": "Arabidopsis", "refseq_name": "EMBRYO SURROUNDING FACTOR-like protein", "refseq_ac": "NP_001077509", "gene_names_uniprotkb": "ESF1.3; F20B24; MEG1.3; T16B5", "gene_names_refseq": "EMBRYO SURROUNDING FACTORS 1.3; ESF1.3", "protein_names_uniprotkb": "EMBRYO SURROUNDING FACTOR 1.3; Maternally expressed family protein 1.3; Maternally expressed gene 1.3", "protein_names_refseq": "EMBRYO SURROUNDING FACTOR-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10717)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;24723605;27862469", "class_list": "", "function": "Maternally-contributed central cell peptide regulating suspensor development and correct auxin distribution in early developing embryos., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0000578 embryonic axis specification;GO:0010098 suspensor development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A8MQA5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MQN2-1", "uniprot_id": "LNK1_ARATH", "mass": 68181.0, "length": 616, "protein_name": "Protein LNK1", "gene_name": "LNK1", "organism": "Arabidopsis", "refseq_name": "dentin sialophosphoprotein-like protein", "refseq_ac": "NP_001078793", "gene_names_uniprotkb": "LNK1; MHJ24.1", "gene_names_refseq": "LNK1; MHJ24.1; MHJ24_1; night light-inducible and clock-regulated 1", "protein_names_uniprotkb": "Protein LNK1; Night light-inducible and clock-regulated 1", "protein_names_refseq": "dentin sialophosphoprotein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64170)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "19423640;23818596;24690904;25012192;25332490;25561503;25848001;25848708;27862469;9501997", "class_list": "", "function": "Transcriptional coactivator necessary for expression of the clock genes PRR5 and TOC1 (PubMed:25012192, PubMed:25848708). Antagonizes REV8 function in the regulation of anthocyanin accumulation (PubMed:25848001). Involved in red light input to the clock (PubMed:25012192). Activates clock-controlled genes with afternoon peak (PubMed:23818596). Mediates light inhibition of hypocotyl elongation (PubMed:23818596)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DGM4;Q9FMI3", "ec_number_list": "", "go_molecular_function": "GO:0070063 RNA polymerase binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0032922 circadian regulation of gene expression;GO:0009649 entrainment of circadian clock;GO:0006354 DNA-templated transcription elongation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8MQN2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E3VNM4-1", "uniprot_id": "TGA10_ARATH", "mass": 51167.0, "length": 460, "protein_name": "Transcription factor TGA10", "gene_name": "TGA10", "organism": "Arabidopsis", "refseq_name": "bZIP transcription factor family protein", "refseq_ac": "NP_001190244", "gene_names_uniprotkb": "TGA10; BZIP65; MOJ9.1; bZIP65", "gene_names_refseq": "TGA10; TGACG (TGA) motif-binding protein 10; bZIP65", "protein_names_uniprotkb": "Transcription factor TGA10; AtbZIP65; Protein TGACG (TGA) motif-binding protein 10; bZIP transcription factor 65", "protein_names_refseq": "bZIP transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06839)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11906833;16731568;20805327;26187819;27717447;27862469;9679202", "class_list": "", "function": "Together with TGA9, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K593;Q93XM5;Q9FL60", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0002237 response to molecule of bacterial origin;GO:0071588 hydrogen peroxide mediated signaling pathway;GO:0048653 anther development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "E3VNM4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MR65-1", "uniprot_id": "FHL_ARATH", "mass": 22376.0, "length": 201, "protein_name": "Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE", "gene_name": "FHL", "organism": "Arabidopsis", "refseq_name": "far-red-elongated hypocotyl1-like protein", "refseq_ac": "NP_001078521", "gene_names_uniprotkb": "FHL; T7H20.250", "gene_names_refseq": "FHL; T7H20.250; T7H20_250; far-red-elongated hypocotyl1-like", "protein_names_uniprotkb": "Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE", "protein_names_refseq": "far-red-elongated hypocotyl1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02200)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130714;16045472;17566111;18033885;19208901;19482971;21097709;21884939;21969386;22303272;22374392;23820729;27862469", "class_list": "", "function": "Can activate transcription (By similarity). Essential for light-regulated PHYA nuclear accumulation and subsequent PHYA phototropic signaling processes (PubMed:17566111, PubMed:21969386, PubMed:22374392). PHYA-specific signal transducer in response to continuous FR lights. Mediates the association of PHYA with HFR1 and LAF1 in the nucleus in response to FR conditions (PubMed:16045472, PubMed:19482971). Contributes to inhibition of hypocotyl elongation in continuous blue light (B) (PubMed:16045472)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "D5MAD5;Q9LZL2", "ec_number_list": "", "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009416 response to light stimulus;GO:0051457 maintenance of protein location in nucleus;GO:0031048 regulatory ncRNA-mediated heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "A8MR65-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MR93-1", "uniprot_id": "ALG12_ARATH", "mass": 57192.0, "length": 497, "protein_name": "Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase", "gene_name": "ALG12", "organism": "Arabidopsis", "refseq_name": "homolog of asparagine-linked glycosylation 12", "refseq_ac": "NP_001077446", "gene_names_uniprotkb": "ALG12; EBS4; T6A9", "gene_names_refseq": "ALG12; EBS4; EMS-MUTAGENIZED BRI1(BRASSINOSTEROID INSENSITIVE 1) SUPPRESSOR 4; homolog of asparagine-linked glycosylation 12", "protein_names_uniprotkb": "Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase; 2.4.1.260; Alpha-1,6-mannosyltransferase ALG12; Asparagine-linked glycosylation protein 12; EMS-mutagenized BRI1 suppressor 4", "protein_names_refseq": "homolog of asparagine-linked glycosylation 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02145)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;17147637;20023196;27862469", "class_list": "", "function": "Mannosyltransferase that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The assembly of dolichol-linked oligosaccharides begins on the cytosolic side of the endoplasmic reticulum membrane and finishes in its lumen. The sequential addition of sugars to dolichol pyrophosphate produces dolichol-linked oligosaccharides containing fourteen sugars, including two GlcNAcs, nine mannoses and three glucoses. Once assembled, the oligosaccharide is transferred from the lipid to nascent proteins by oligosaccharyltransferases. In the lumen of the endoplasmic reticulum, adds the eighth mannose residue in an alpha-1,6 linkage onto Man(7)GlcNAc(2)-PP-dolichol to produce Man(8)GlcNAc(2)-PP-dolichol., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "F4HVW9;F4HVX0;Q0WT37;Q1G329;Q1G330", "ec_number_list": "2.4.1.260", "go_molecular_function": "GO:0000009 alpha-1,6-mannosyltransferase activity;GO:0052917 dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006487 protein N-linked glycosylation;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8MR93-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0Z2L5-1", "uniprot_id": "BZP44_ARATH", "mass": 19073.0, "length": 173, "protein_name": "bZIP transcription factor 44", "gene_name": "BZIP44", "organism": "Arabidopsis", "refseq_name": "basic leucine-zipper 44", "refseq_ac": "NP_177672", "gene_names_uniprotkb": "BZIP44; AtbZIP44; F1B16.8; F1B16_8; bZIP44; basic leucine-zipper 44", "gene_names_refseq": "AtbZIP44; F1B16.8; F1B16_8; bZIP44; basic leucine-zipper 44", "protein_names_uniprotkb": "bZIP transcription factor 44; AtbZIP44", "protein_names_refseq": "basic leucine-zipper 44", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75390)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11906833;14593172;16709202;19423640;23461773;27862469", "class_list": "", "function": "Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FWS7", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "C0Z2L5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MRX0-1", "uniprot_id": "GSOX5_ARATH", "mass": 52104.0, "length": 459, "protein_name": "Flavin-containing monooxygenase FMO GS-OX5", "gene_name": "FMOGS-OX5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "FMOGS-OX5; T28K15.12", "gene_names_refseq": "", "protein_names_uniprotkb": "Flavin-containing monooxygenase FMO GS-OX5; 1.14.13.237; Flavin-monooxygenase glucosinolate S-oxygenase 5", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12140)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;17461789;18799661;27862469", "class_list": "", "function": "Catalyzes the conversion of methylthioalkyl glucosinolates into methylsulfinylalkyl glucosinolates. Specific for 8-methylthiooctyl (8-MTO) glucosinolates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FWW4", "ec_number_list": "1.14.13.237;1.-.-.-", "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0050661 NADP binding;GO:0004497 monooxygenase activity;GO:0004499 N,N-dimethylaniline monooxygenase activity;GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0046620 regulation of organ growth;GO:0046885 regulation of hormone biosynthetic process;GO:0019761 glucosinolate biosynthetic process;GO:0048444 floral organ morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8MRX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MS68-1", "uniprot_id": "PLPD1_ARATH", "mass": 66661.0, "length": 623, "protein_name": "Dihydrolipoyl dehydrogenase 1, chloroplastic", "gene_name": "LPD1", "organism": "Arabidopsis", "refseq_name": "lipoamide dehydrogenase 1", "refseq_ac": "NP_001078165", "gene_names_uniprotkb": "LPD1; K14A17.6", "gene_names_refseq": "LIPOAMIDE DEHYDROGENASE; LPD1; lipoamide dehydrogenase 1; ptlpd1", "protein_names_uniprotkb": "Dihydrolipoyl dehydrogenase 1, chloroplastic; 1.8.1.4; Dihydrolipoamide dehydrogenase 1; E3-1; PDC-E3 1; Protein LIPOAMIDE DEHYDROGENASE 1; Pyruvate dehydrogenase complex E3 subunit 1; ptLPD1", "protein_names_refseq": "lipoamide dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16950)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;11056213;14593172;19423640;20488895;27862469;29654922", "class_list": "", "function": "Lipoamide dehydrogenase is a component of the plastidial pyruvate dehydrogenase complex (PDC)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG34;Q9M5K5", "ec_number_list": "1.8.1.4", "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0004148 dihydrolipoyl dehydrogenase (NADH) activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0045252 oxoglutarate dehydrogenase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0006103 2-oxoglutarate metabolic process;GO:0006086 pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A8MS68-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8MS85-1", "uniprot_id": "SPT61_ARATH", "mass": 185034.0, "length": 1647, "protein_name": "Transcription elongation factor SPT6 homolog", "gene_name": "GTB1; SPT6", "organism": "Arabidopsis", "refseq_name": "global transcription factor group B1", "refseq_ac": "NP_001321759", "gene_names_uniprotkb": "GTB1; SPT6; GTB1; SPT6L; T8F5.22; T8F5_22", "gene_names_refseq": "GLOBAL TRANSCRIPTION FACTOR GROUP B; GTB1; T8F5.22; T8F5_22; global transcription factor group B1", "protein_names_uniprotkb": "Transcription elongation factor SPT6 homolog; AtSPT6", "protein_names_refseq": "global transcription factor group B1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65440)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;18463617;19376835;20139304;20466843;21948524;23328941;23660473;23776212;25561503;27862469;30833711", "class_list": "", "function": "Transcription elongation factor that enhances the transcription elongation by RNA polymerase II (RNAPII) (By similarity). Plays an important role in regulating embryo apical and basal patterning during early embryogenesis, partly through negative regulation of the transcription factors PHABULOSA and PHAVOLUTA., [UniProtKB, UniProtKB]; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80815;Q0WN83", "ec_number_list": "", "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0003746 translation elongation factor activity;GO:0042393 histone binding;GO:0031491 nucleosome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0008023 transcription elongation factor complex;GO:0009506 plasmodesma", "go_biological_process": "GO:0034728 nucleosome organization;GO:0006368 transcription elongation by RNA polymerase II;GO:0140673 transcription elongation-coupled chromatin remodeling;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A8MS85-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8R7E6-1", "uniprot_id": "CERK1_ARATH", "mass": 67315.0, "length": 617, "protein_name": "Chitin elicitor receptor kinase 1", "gene_name": "CERK1", "organism": "Arabidopsis", "refseq_name": "chitin elicitor receptor kinase 1", "refseq_ac": "NP_566689", "gene_names_uniprotkb": "CERK1; LYK1; MIL23.20; RLK1", "gene_names_refseq": "AtCERK1; AtLYK1; CERK1; LYK1; LYSM DOMAIN RECEPTOR-LIKE KINASE 1; LYSM RLK1; LysM-containing receptor-like kinase 1; chitin elicitor receptor kinase 1", "protein_names_uniprotkb": "Chitin elicitor receptor kinase 1; 2.7.11.1; AtCERK1; LysM RLK1; LysM domain receptor-like kinase 1; LysM-containing receptor-like kinase 1", "protein_names_refseq": "chitin elicitor receptor kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21630)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10819329;17317660;18042724;18263776;19249211;19816132;19951949;20610395;22106285;22461667;22654057;22740685;22744984;22891159;24750441;25561503;27317676;27565204;27679653;27862469;29388878;31119298", "class_list": "", "function": "Lysin motif (LysM) receptor kinase that functions as a cell surface receptor in chitin elicitor (chitooligosaccharides) signaling leading to innate immunity toward both biotic and abiotic stresses (e.g. tolerance to salinity, heavy-metal stresses, and Botrytis cinerea infection). Recognizes microbe-derived N-acetylglucosamine (NAG)-containing ligands. Involved in the resistance to pathogenic fungi Alternaria brassicicola and Erysiphe cichoracearum, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patterns (PAMP). Plays an essential role in detecting peptidoglycans (e.g. PGNs) and restricting bacterial growth. Target of the bacterial type III effector E3-ligase protein hopAB2/avrPtoB of Pseudomonas syringae pv. tomato DC3000 that mediates ubiquitination and subsequent proteolysis, thus blocking all defense responses by suppressing PAMP-triggered immunity (PTI). Mediates chitin-induced phosphorylation of PBL27 (PubMed:24750441)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 5, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 5, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 5, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q9LVE3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0045087 innate immune response;GO:0046777 protein autophosphorylation;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "A8R7E6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8R7K9-1", "uniprot_id": "VP35C_ARATH", "mass": 89405.0, "length": 790, "protein_name": "Vacuolar protein sorting-associated protein 35C", "gene_name": "VPS35C", "organism": "Arabidopsis", "refseq_name": "VPS35 homolog C", "refseq_ac": "NP_190699", "gene_names_uniprotkb": "VPS35C; F24M12.350", "gene_names_refseq": "VPS35 homolog C; VPS35C", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 35C; Vesicle protein sorting 35C", "protein_names_refseq": "VPS35 homolog C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51310)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;16582012;18222962;27862469", "class_list": "", "function": "Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Also involved in the efficient sorting of seed storage proteins (By similarity). The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SD18", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030906 retromer, cargo-selective complex;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8R7K9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A9LLI7-1", "uniprot_id": "RP6L2_ARATH", "mass": 97889.0, "length": 870, "protein_name": "Protein RRP6-like 2", "gene_name": "RRP6L2", "organism": "Arabidopsis", "refseq_name": "Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein", "refseq_ac": "NP_198440", "gene_names_uniprotkb": "RRP6L2; MIK22.22", "gene_names_refseq": "MIK22.22; MIK22_22", "protein_names_uniprotkb": "Protein RRP6-like 2; AtRRP6L2", "protein_names_refseq": "Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35910)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "18285452;18463617;20466843;23111157;23328941;23555312;25211139;25561503;27862469;29654922;30833711;9330910", "class_list": "", "function": "Acts as an important epigenetic regulator through multiple silencing mechanisms (PubMed:23555312, PubMed:25211139). Involved in association with RRP6L1 in the silencing of the solo LTR locus. Controls levels of non-coding RNAs (ncRNAs) from the solo LTR locus. Seems to function independently of the RNA-mediated gene silencing (RdDM) pathway (PubMed:23555312). Functions redundantly with RRP6L1 in the regulation of FLC locus. Participates in the maintenance of trimethylated 'Lys-27' (H3K27me3) at FLC locus via the regulation of antisense long non-coding RNAs (lncRNAs) and the regulation of diverse antisense RNAs derived from the FLC locus. Seems not involved in the exosomal RNA degradation (PubMed:25211139). May be involved in poly(A)-mediated RNA degradation (PubMed:18285452)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFL2", "ec_number_list": "", "go_molecular_function": "GO:0000166 nucleotide binding;GO:0003727 single-stranded RNA binding;GO:0000175 3'-5'-RNA exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0000176 nuclear exosome (RNase complex)", "go_biological_process": "GO:0006364 rRNA processing;GO:0071044 histone mRNA catabolic process;GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process;GO:0071038 TRAMP-dependent tRNA surveillance pathway", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "A9LLI7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0F481-1", "uniprot_id": "BIODA_ARATH", "mass": 91935.0, "length": 833, "protein_name": "Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial", "gene_name": "BIO3-BIO1", "organism": "Arabidopsis", "refseq_name": "adenosylmethionine-8-amino-7-oxononanoate transaminase", "refseq_ac": "NP_200567", "gene_names_uniprotkb": "BIO3-BIO1; BIO1; BIO3; BioA; MUA2.18", "gene_names_refseq": "BIO1; MUA2.17; MUA2_17; biotin auxotroph 1", "protein_names_uniprotkb": "Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; 2.6.1.62; 7,8-diaminononanoate synthase; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Bifunctional BIO3-BIO1 protein; DANS; DTB synthetase; DTBS; Diaminopelargonic acid synthase; Protein BIOTIN AUXOTROPH 1; Protein BIOTIN AUXOTROPH 3", "protein_names_refseq": "adenosylmethionine-8-amino-7-oxononanoate transaminase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57590)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11779812;12644697;14593172;16667573;17993549;22547782;23031218;27862469;2909401;40028677;8676868;9679202", "class_list": "", "function": "Bifunctional enzyme that catalyzes two different reactions involved in the biotin biosynthesis., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]; Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]; Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA) (PubMed:22547782). It is the only aminotransferase known to utilize SAM as an amino donor (PubMed:22547782). Can also use spermidine as the amino donor to produce DAPA with KAPA as substrate (PubMed:40028677)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0F482;Q681L5;Q6NQL9;Q9FKL4;Q9FKL5", "ec_number_list": "2.6.1.62;6.3.3.3;2.6.1.127", "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0030170 pyridoxal phosphate binding;GO:0042803 protein homodimerization activity;GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0009102 biotin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "B0F481-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0F9L4-1", "uniprot_id": "GOGC6_ARATH", "mass": 101834.0, "length": 914, "protein_name": "Golgin candidate 6", "gene_name": "GC6", "organism": "Arabidopsis", "refseq_name": "golgin Putative 6", "refseq_ac": "NP_566820", "gene_names_uniprotkb": "GC6; MAG4; MMJ24.8; MMJ24_7", "gene_names_refseq": "GC6; MAG4; MAIGO 4; golgin candidate 6", "protein_names_uniprotkb": "Golgin candidate 6; AtGC6; Protein MAIGO 4", "protein_names_refseq": "golgin Putative 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27530)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10819329;14593172;18182439;18433157;19245862;19376835;20466843;20837504;21768351;22074104;22631563;23111157;23328941;23572148;23660473;23776212;23820729;26091701;26187819;27862469;28011693;30833711", "class_list": "", "function": "Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus. Functions in the anterograde transport of storage protein precursors from the endoplasmic reticulum (ER) to the Golgi complex., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q940C3;Q9LT59", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0009791 post-embryonic development;GO:0061025 membrane fusion;GO:0048211 Golgi vesicle docking", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "B0F9L4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3DNN5-1", "uniprot_id": "CDC16_ARATH", "mass": 61762.0, "length": 543, "protein_name": "Anaphase-promoting complex subunit 6", "gene_name": "APC6", "organism": "Arabidopsis", "refseq_name": "anaphase promoting complex 6", "refseq_ac": "NP_565188", "gene_names_uniprotkb": "APC6; CDC16; F9K20.19", "gene_names_refseq": "APC6; F9K20.19; F9K20_19; anaphase promoting complex 6", "protein_names_uniprotkb": "Anaphase-promoting complex subunit 6; CDC16 homolog; Cell division cycle protein 16 homolog; Cyclosome subunit 6; Protein NOMEGA", "protein_names_refseq": "anaphase promoting complex 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78770)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11910074;14675450;19336465;27862469", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXT0;Q8L5J4;Q8LEK0;Q9ZV95", "ec_number_list": "", "go_molecular_function": "GO:0140767 enzyme-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0045842 positive regulation of mitotic metaphase/anaphase transition;GO:0032875 regulation of DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3DNN5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3GS44-1", "uniprot_id": "LRE_ARATH", "mass": 18337.0, "length": 165, "protein_name": "GPI-anchored protein LORELEI", "gene_name": "LRE", "organism": "Arabidopsis", "refseq_name": "lorelei", "refseq_ac": "NP_001119062", "gene_names_uniprotkb": "LRE; M3E9", "gene_names_refseq": "LORELEI; LRE", "protein_names_uniprotkb": "GPI-anchored protein LORELEI", "protein_names_refseq": "lorelei", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26466)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;19028964;20163554;26052747;27081182;27862469", "class_list": "", "function": "Female gametophyte-specific component of the signaling pathway required for fertilization. Required for reception of the pollen tube by the female gametophyte (PubMed:19028964, PubMed:26052747, PubMed:27081182). Acts specifically at the synergid cell surface for pollen tube reception (PubMed:26052747, PubMed:27081182). Plays a role in double fertilization and early seed development (PubMed:20163554). Component of the FER-regulated Rho GTPase signaling complex. Acts as a chaperone and coreceptor for FER. Required for localization of FER to the plasma membrane (PubMed:26052747)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A0G7ZNQ5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0009567 double fertilization forming a zygote and endosperm;GO:0010183 pollen tube guidance;GO:0010483 pollen tube reception;GO:0010198 synergid death", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B3GS44-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H4Y2-1", "uniprot_id": "STMP3_ARATH", "mass": 8663.0, "length": 80, "protein_name": "Secreted transmembrane peptide 3", "gene_name": "STMP3", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_001117550", "gene_names_uniprotkb": "STMP3; F5I14", "gene_names_refseq": "", "protein_names_uniprotkb": "Secreted transmembrane peptide 3; Phytocytokine STMP3; Precursor of secreted transmembrane peptide 3", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65484)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;27862469;31001913", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009751 response to salicylic acid;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B3H4Y2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H5A8-1", "uniprot_id": "RVE7_ARATH", "mass": 41542.0, "length": 372, "protein_name": "Protein REVEILLE 7", "gene_name": "RVE7", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": "NP_001117304", "gene_names_uniprotkb": "RVE7; EPR1; F15H18.16", "gene_names_refseq": "EARLY-PHYTOCHROME-RESPONSIVE1; EPR1; F15H18.16; F15H18_16; REVEILLE 7; RVE7", "protein_names_uniprotkb": "Protein REVEILLE 7; Early-phytochrome-responsive 1; MYB-related transcription factor EPR1", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18330)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14523250;14593172;19805390;27862469", "class_list": "", "function": "Transcription factor involved in phytochrome A-mediated cotyledon opening. Controlled by the central oscillator mediated by LHY and CCA1. Part of a regulatory circadian feedback loop. Regulates its own expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZP5;Q9LPQ1", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3H5A8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H5A9-1", "uniprot_id": "PCEP6_ARATH", "mass": 11222.0, "length": 101, "protein_name": "Precursor of CEP6", "gene_name": "CEP6", "organism": "Arabidopsis", "refseq_name": "DNA-directed RNA polymerase II subunit RPB1-like protein", "refseq_ac": "NP_001119514", "gene_names_uniprotkb": "CEP6; MUD21", "gene_names_refseq": "", "protein_names_uniprotkb": "Precursor of CEP6; PCEP6", "protein_names_refseq": "DNA-directed RNA polymerase II subunit RPB1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66816)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24179095;24179096;25324386;27862469;9679202", "class_list": "", "function": "Extracellular signaling peptide that represses primary root growth rate. Modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0006995 cellular response to nitrogen starvation;GO:0048364 root development;GO:1901371 regulation of leaf morphogenesis;GO:1902025 nitrate import;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3H5A9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H5J1-1", "uniprot_id": "GLV10_ARATH", "mass": 10052.0, "length": 88, "protein_name": "Protein GOLVEN 10", "gene_name": "GLV10", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor", "refseq_ac": "NP_001119414", "gene_names_uniprotkb": "GLV10; CLEL7; MFG13; RGF5", "gene_names_refseq": "CLE-like7; CLEL7; GLV10; GOLVEN 10; RGF5; root meristem growth factor 5", "protein_names_uniprotkb": "Protein GOLVEN 10; AtRGF5; CLAVATA3/ESR (CLE)-related protein CLEL7; CLE-Like protein 7; Root meristem growth factor 5", "protein_names_refseq": "root meristem growth factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51451)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20798316;22307643;23370719;27001831;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that maintains the postembryonic root stem cell niche (PubMed:20798316). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (PubMed:22307643, PubMed:23370719)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008284 positive regulation of cell population proliferation;GO:0030154 cell differentiation;GO:0010082 regulation of root meristem growth;GO:0048527 lateral root development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3H5J1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H5K9-1", "uniprot_id": "NEDD1_ARATH", "mass": 84757.0, "length": 782, "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": "NP_001119176", "gene_names_uniprotkb": "NEDD1; GCP-WD; K18J17.16", "gene_names_refseq": "DEVELOPMENTALLY DOWN-REGULATED GENE 1; K18J17.16; K18J17_16; NEDD1; NEURAL PRECURSOR CELL EXPRESSED", "protein_names_uniprotkb": "Protein NEDD1; Neural precursor cell expressed developmentally down-regulated protein 1 homolog; Protein GCP-WD", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05970)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10470850;14593172;19383896;23111157;25438942;25561503;27862469;28154133", "class_list": "", "function": "Regulates microtubules organization in a centrosome-independent manner. Required for the spindle to be positioned correctly and for the function of gamma-tubulin in organizing phragmoplast microtubules (PubMed:19383896). Component of active gamma-tubulin ring complexes (gamma-TuRCs) associated with cortical microtubules in interphase cells (PubMed:25438942). Mediates gamma-TuRC recruitment to the nucleation sites and is important for determining the ratio of branched to parallel nucleation (PubMed:25438942). May mediate the localization of GCP2 and GCP3 to the nuclear envelope (PubMed:19383896)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 1, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 7, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 7, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 7, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "B6EUA6;Q9FI89", "ec_number_list": "", "go_molecular_function": "GO:0140496 gamma-tubulin complex binding", "go_cellular_component": "GO:0005828 kinetochore microtubule;GO:0005635 nuclear envelope;GO:0005815 microtubule organizing center;GO:0000776 kinetochore;GO:0009524 phragmoplast", "go_biological_process": "GO:0010968 regulation of microtubule nucleation;GO:0060236 regulation of mitotic spindle organization;GO:0032467 positive regulation of cytokinesis;GO:0000919 cell plate assembly;GO:0009553 embryo sac development", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "B3H5K9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H5Q2-1", "uniprot_id": "GLV8_ARATH", "mass": 12671.0, "length": 111, "protein_name": "Protein GOLVEN 8", "gene_name": "GLV8", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor-like protein", "refseq_ac": "NP_001118555", "gene_names_uniprotkb": "GLV8; CLEL5; F14P3", "gene_names_refseq": "GLV8; GOLVEN 8", "protein_names_uniprotkb": "Protein GOLVEN 8; CLAVATA3/ESR (CLE)-related protein CLEL5; CLE-Like protein 5", "protein_names_refseq": "root meristem growth factor-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02242)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;22307643;23111157;23370719;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that promotes root hairs formation and growth (PubMed:23370719). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0010082 regulation of root meristem growth;GO:0048766 root hair initiation;GO:0080147 root hair cell development;GO:2000023 regulation of lateral root development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B3H5Q2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K0E8-1", "uniprot_id": "ISPG_ARATH", "mass": 82256.0, "length": 741, "protein_name": "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic", "gene_name": "HDS; ISPG", "organism": "Arabidopsis", "refseq_name": "4-hydroxy-3-methylbut-2-enyl diphosphate synthase", "refseq_ac": "NP_200868", "gene_names_uniprotkb": "HDS; ISPG; CHLOROPLAST BIOGENESIS 4; CLB4; CONSTITUTIVE SUBTILISIN 3; CSB3; GCPE; HDS; ISPG; MUP24.15; MUP24.2; MUP24_15", "gene_names_refseq": "4-hydroxy-3-methylbut-2-enyl diphosphate synthase; CHLOROPLAST BIOGENESIS 4; CLB4; CONSTITUTIVE SUBTILISIN 3; CSB3; GCPE; HDS; ISPG; MUP24.15; MUP24_15", "protein_names_uniprotkb": "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1.17.7.1; Protein CHLOROPLAST BIOGENESIS 4; Protein CONSTITUTIVE SUBTILISIN 3", "protein_names_refseq": "4-hydroxy-3-methylbut-2-enyl diphosphate synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60600)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;11943178;14593172;15133149;15650872;15863698;16167903;16480720;18236010;18948055;23572148;25561503;27862469;9330910", "class_list": "", "function": "Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Is essential for chloroplast development and required for the salicylic acid (SA)-mediated disease resistance to biotrophic pathogens., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GZR7;Q8LPQ4;Q8RXG8;Q9FF59", "ec_number_list": "1.17.7.1", "go_molecular_function": "GO:0005506 iron ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009617 response to bacterium;GO:0016114 terpenoid biosynthetic process;GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4K0E8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H754-1", "uniprot_id": "APD3_ARATH", "mass": 45067.0, "length": 404, "protein_name": "E3 ubiquitin-protein ligase APD3", "gene_name": "APD3", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_001324023", "gene_names_uniprotkb": "APD3; F16M14.15", "gene_names_refseq": "ABERRANT POLLEN DEVELOPMENT 3; APD3; F16M14.15; F16M14_15", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase APD3; 2.3.2.27; Protein ABERRANT POLLEN DEVELOPMENT 3", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38220)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;22897245;27862469", "class_list": "", "function": "Involved in pollen mitosis II (PMII) regulation during male gametogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8AYU1;O80447", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0043066 negative regulation of apoptotic process;GO:0045931 positive regulation of mitotic cell cycle;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B3H754-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3H7I1-1", "uniprot_id": "SOP12_ARATH", "mass": 8240.0, "length": 78, "protein_name": "Serine rich endogenous peptide 12", "gene_name": "PROSCOOP12", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_001119372", "gene_names_uniprotkb": "PROSCOOP12; K15C23; SCOOP12", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine rich endogenous peptide 12; AtSCOOP12; Phytocytokine SCOOP12; Precursor of serine rich endogenous peptide phytocytokine 12", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44585)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "27862469;30715439;33514716;34535661;35401621;35639812", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including root growth prevention, phospholipid signaling pathway activation (e.g. accumulation of phosphatidic acid (PA), but transient reduction of phosphatidylinositol 4,5-bisphosphate (PIP(2)) levels) and reactive oxygen species (ROS) response regulation (PubMed:30715439, PubMed:33514716, PubMed:34535661). Moderates primary root growth, and regulates root meristems and cell elongation; this root growth regulation is associated with the modulation of ROS metabolism and alteration of cell wall structure, and depends on variations in many genes expression (PubMed:34535661, PubMed:35639812). Promotes ROS (e.g. superoxide anion O(2) and hydrogen peroxide H(2)O(2)) production and MAPK (e.g. MPK3, MPK4 and MPK6) activation in a MIK2-dependent manner, thus leading to the up-regulation of immune-related marker genes (e.g. WRKY30, WRKY33 and CYP81F2) (PubMed:34535661, PubMed:35639812). Involved in biotic and oxidative stress responses; acts as a negative regulator of defense against necrotrophic pathogens such as the bacteria Erwinia amylovora and the fungus Alternaria brassicicola (PubMed:30715439). Able to prime defense responses against the pathogenic bacteria Pseudomonas syringae pv. tomato DC3000 (PubMed:30715439). Contributes to the triggering of defense responses toward generalist herbivores such as Spodoptera littoralis, probably via the activation of jasmonate and indole glucosinolate biosynthesis (PubMed:35401621). Triggers the expression of several PROSCOOP genes (e.g. PROSCOOP3, PROSCOOP7, PROSCOOP12 and PROSCOOP13) (PubMed:30715439)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:1903409 reactive oxygen species biosynthetic process;GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:2000378 negative regulation of reactive oxygen species metabolic process;GO:2000377 regulation of reactive oxygen species metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B3H7I1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B3LF48-1", "uniprot_id": "EHD2_ARATH", "mass": 61383.0, "length": 546, "protein_name": "EH domain-containing protein 2", "gene_name": "EHD2", "organism": "Arabidopsis", "refseq_name": "EPS15 homology domain 2", "refseq_ac": "NP_567299", "gene_names_uniprotkb": "EHD2; T1J24.10", "gene_names_refseq": "ATEHD2; EHD2; EPS15 homology domain 2; T1J24.10; T1J24_10", "protein_names_uniprotkb": "EH domain-containing protein 2; 3.6.5.2; AtEHD2", "protein_names_refseq": "EPS15 homology domain 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G05520)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;18547399;19704436;19936242;23111157;26091701;27862469;30833711", "class_list": "", "function": "Involved in endocytosis negative regulation, probably by influencing actin organization. Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes. Exhibits an inhibitory effect on endocytosis when over-expressed., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JGH2;Q9S9W1", "ec_number_list": "3.6.5.2;3.6.5.-;3.6.5.3;3.6.5.4;3.6.5.5;3.6.5.n1", "go_molecular_function": "GO:0005525 GTP binding;GO:0030674 protein-macromolecule adaptor activity;GO:0005509 calcium ion binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0032956 regulation of actin cytoskeleton organization;GO:0051260 protein homooligomerization;GO:0016197 endosomal transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B3LF48-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B5BT18-1", "uniprot_id": "BTAF1_ARATH", "mass": 227055.0, "length": 2045, "protein_name": "TATA-binding protein-associated factor BTAF1", "gene_name": "BTAF1; RGD3", "organism": "Arabidopsis", "refseq_name": "ROOT GROWTH DEFECTIVE 3", "refseq_ac": "NP_190996", "gene_names_uniprotkb": "BTAF1; RGD3; ATBTAF1; BTAF1; CHA16; CHR16; F24B22.240; RGD3; ROOT GROWTH DEFECTIVE 3", "gene_names_refseq": "ATBTAF1; BTAF1; CHA16; CHR16; RGD3; ROOT GROWTH DEFECTIVE 3", "protein_names_uniprotkb": "TATA-binding protein-associated factor BTAF1; 3.6.4.-; AtBTAF1; Protein BTAF1 homolog; Protein ROOT GROWTH DEFECTIVE 3", "protein_names_refseq": "ROOT GROWTH DEFECTIVE 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54280)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14522871;19054368;22060019;24043427;24265739;25561503;27862469", "class_list": "", "function": "Involved in meristem development. Acts as a positive regulator of the CUC-STM pathway in shoot apical meristem (SAM) neo-formation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M378", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0017025 TBP-class protein binding;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:1902185 positive regulation of shoot apical meristem development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B5BT18-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B5X0I6-1", "uniprot_id": "VIP6_ARATH", "mass": 124088.0, "length": 1091, "protein_name": "Protein CTR9 homolog", "gene_name": "VIP6", "organism": "Arabidopsis", "refseq_name": "binding protein", "refseq_ac": "NP_178674", "gene_names_uniprotkb": "VIP6; ELF8", "gene_names_refseq": "EARLY FLOWERING 8; ELF8; F5K7.3; F5K7_3; VERNALIZATION INDEPENDENCE 6; VIP6", "protein_names_uniprotkb": "Protein CTR9 homolog; Protein EARLY FLOWERING 8; Protein VERNALIZATION INDEPENDENCE 6", "protein_names_refseq": "binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06210)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;12750345;14593172;15472079;15520273;20363855;20466843;21799800;22223895;27862469", "class_list": "", "function": "Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the MADS box genes and flowering repressors FLC, AGL27/FLM and AGL31/MAF2 (PubMed:15472079, PubMed:15520273). Required for histone H3 trimethylation on 'Lys-4' H3K4me3 at the FLC and AGL27/FLM loci (PubMed:15520273). Involved in the control of seed dormancy and germination (PubMed:21799800)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8H1;Q8VYL2", "ec_number_list": "", "go_molecular_function": "GO:0000993 RNA polymerase II complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016593 Cdc73/Paf1 complex", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0006368 transcription elongation by RNA polymerase II;GO:0009908 flower development;GO:0009910 negative regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B5X0I6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B5X4Z9-1", "uniprot_id": "STU_ARATH", "mass": 68877.0, "length": 617, "protein_name": "Protein kinase STUNTED", "gene_name": "STU", "organism": "Arabidopsis", "refseq_name": "kinase with adenine nucleotide alpha hydrolases-like domain-containing protein", "refseq_ac": "NP_001318232", "gene_names_uniprotkb": "STU; T24I21.16", "gene_names_refseq": "T24I21.16; T24I21_16", "protein_names_uniprotkb": "Protein kinase STUNTED; 2.7.11.-", "protein_names_refseq": "kinase with adenine nucleotide alpha hydrolases-like domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16750)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;22074104;22492352;27862469", "class_list": "", "function": "Promotes cell proliferation in the gibberellic acid (GA) signaling pathway, acting downstream of RGA, and possibly through a negative regulation of two cyclin-dependent kinase inhibitors SIM and SMR1., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VX47;Q67Z29;Q9SLE3", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0051781 positive regulation of cell division;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009739 response to gibberellin;GO:0010476 gibberellin mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B5X4Z9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B5X582-1", "uniprot_id": "TWIH_ARATH", "mass": 80403.0, "length": 709, "protein_name": "Primase-helicase Twinkle, chloroplastic/mitochondrial", "gene_name": "T5I8.13", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "T5I8.13", "gene_names_refseq": "", "protein_names_uniprotkb": "Primase-helicase Twinkle, chloroplastic/mitochondrial; 2.7.7.-; 5.6.2.3; DNA 5'-3' helicase Twinkle; DNA primase; Twinkle homolog protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19036033;23452619;27862469;37803262", "class_list": "", "function": "Has both DNA primase (PubMed:23452619, PubMed:37803262) and ATP-dependent DNA helicase activities (helicase direction was not shown) (PubMed:23452619). Probably involved in organelle DNA replication. Catalyzes the synthesis of short RNA molecules of 9 to 18 bases from a single-stranded DNA template used as primers for DNA polymerase during DNA replication (PubMed:23452619)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GUI8;Q9SA83", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0003697 single-stranded DNA binding;GO:0003678 DNA helicase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006269 DNA replication, synthesis of primer;GO:0009260 ribonucleotide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B5X582-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B6EUA9-1", "uniprot_id": "PR40A_ARATH", "mass": 109382.0, "length": 958, "protein_name": "Pre-mRNA-processing protein 40A", "gene_name": "PRP40A", "organism": "Arabidopsis", "refseq_name": "pre-mRNA-processing protein 40A", "refseq_ac": "NP_001117438", "gene_names_uniprotkb": "PRP40A; F27F5.2; MED35A; MED35_1; T12C22.20", "gene_names_refseq": "ATPRP40A; F27F5.2; PRP40A; pre-mRNA-processing protein 40A", "protein_names_uniprotkb": "Pre-mRNA-processing protein 40A; AtPRP40a", "protein_names_refseq": "pre-mRNA-processing protein 40A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G44910)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;17560376;19376835;19423640;19467629;20466843;21768351;22021418;23111157;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27419465;27862469;29167316;29654922;30833711", "class_list": "", "function": "Binds the phosphorylated C-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries (Probable). May be involved in pre-mRNA splicing (Probable)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B3H7M9;B9DFP8;Q9LPD8;Q9MAL4", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0070063 RNA polymerase binding", "go_cellular_component": "GO:0005685 U1 snRNP;GO:0005634 nucleus;GO:0016592 mediator complex;GO:0071004 U2-type prespliceosome", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0045292 mRNA cis splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "B6EUA9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B7U179-1", "uniprot_id": "ABAP1_ARATH", "mass": 81361.0, "length": 737, "protein_name": "ARMADILLO BTB ARABIDOPSIS PROTEIN 1", "gene_name": "ABAP1", "organism": "Arabidopsis", "refseq_name": "ARMADILLO BTB protein 1", "refseq_ac": "NP_196810", "gene_names_uniprotkb": "ABAP1; T19L5.20", "gene_names_refseq": "ABAP1; ARMADILLO BTB protein 1; T19L5.20; T19L5_20", "protein_names_uniprotkb": "ARMADILLO BTB ARABIDOPSIS PROTEIN 1; ABAP1", "protein_names_refseq": "ARMADILLO BTB protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;15749712;18818695;26538092;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). In association with TCP24, exerts a negative role in cell proliferation in leaves, possibly by inhibiting mitotic DNA replication., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RY88;Q9FYA4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0031261 DNA replication preinitiation complex;GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:2000104 negative regulation of DNA-templated DNA replication;GO:0008285 negative regulation of cell population proliferation;GO:0042127 regulation of cell population proliferation;GO:0016567 protein ubiquitination;GO:0006261 DNA-templated DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B7U179-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B7ZWR6-1", "uniprot_id": "OEP61_ARATH", "mass": 60757.0, "length": 554, "protein_name": "Outer envelope protein 61", "gene_name": "OEP61", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": "NP_680187", "gene_names_uniprotkb": "OEP61; T6G21.100; TPR7", "gene_names_refseq": "AtTPR7; OEP61; TPR7; outer envelope protein 61; tetratricopeptide repeat 7", "protein_names_uniprotkb": "Outer envelope protein 61; Tetratricopeptide repeat domain-containing protein 7", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21990)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11910074;18463617;20466843;20856808;21612577;22899711;25561503;27862469;30833711", "class_list": "", "function": "Plays a role in protein import into the endoplasmic reticulum (ER). May function as chaperone docking protein during post-translational protein translocation into the ER. Chaperone receptor mediating Hsp70-dependent protein targeting to chloroplasts. Interacts specifically with some chloroplast precursors, but not with mitochondrial precursors. Able to select precursors for delivery to the chloroplast translocase independently of Hsp70., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWM6;Q9C588", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0009536 plastid;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0015031 protein transport;GO:0046967 cytosol to endoplasmic reticulum transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B7ZWR6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B8XCH5-1", "uniprot_id": "QKY_ARATH", "mass": 121413.0, "length": 1081, "protein_name": "Protein QUIRKY", "gene_name": "QKY", "organism": "Arabidopsis", "refseq_name": "C2 calcium/lipid-binding plant phosphoribosyltransferase family protein", "refseq_ac": "NP_177610", "gene_names_uniprotkb": "QKY; F1M20.40; F25A4.30; MCTP15", "gene_names_refseq": "F25A4.35; F25A4_35; QKY; QUIRKY", "protein_names_uniprotkb": "Protein QUIRKY; Multiple C2 domain and transmembrane region protein 15", "protein_names_refseq": "C2 calcium/lipid-binding plant phosphoribosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74720)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;17317660;19180193;20298225;22060019;23111157;24173806;25256344;25561503;27862469;29259105;30833711", "class_list": "", "function": "May be involved in Ca 2(+)-dependent signaling and membrane trafficking. Plays a role in fruit dehiscence (Probable). Components of the machinery involved in organ development mediated by the receptor-like kinase STRUBBELIG (SUB) (PubMed:19180193, PubMed:20298225). Collaboratively with SUB and POQ, regulates cell growth anisotropy during gynoecium development, thus linking together cell-cell communication and cellular growth (PubMed:24173806). Together with SUB/SCM, links RLK-dependent signal transduction and intercellular communication mediated by plasmodesmata (PD) to regulate tissue morphogenesis (PubMed:25256344). May function as a signaling molecule by regulating the trafficking of other regulators (PubMed:29259105)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLK0;Q9CA47;Q9SSF7", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0048729 tissue morphogenesis;GO:0009911 positive regulation of flower development;GO:0010497 plasmodesmata-mediated intercellular transport;GO:0048467 gynoecium development;GO:0051211 anisotropic cell growth", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "B8XCH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFG3-1", "uniprot_id": "ISE2_ARATH", "mass": 132437.0, "length": 1171, "protein_name": "DExH-box ATP-dependent RNA helicase DExH15 chloroplastic", "gene_name": "ISE2", "organism": "Arabidopsis", "refseq_name": "DEAD/DEAH box helicase", "refseq_ac": "NP_177164", "gene_names_uniprotkb": "ISE2; EMB25; F20P5.20; PDE317", "gene_names_refseq": "EMB25; EMBRYO DEFECTIVE 25; F20P5.20; F20P5_20; INCREASED SIZE EXCLUSION LIMIT 2; ISE2; PDE317; PIGMENT DEFECTIVE 317", "protein_names_uniprotkb": "DExH-box ATP-dependent RNA helicase DExH15 chloroplastic; 3.6.4.13; ATP-dependent RNA helicase ISE2; Protein EMBRYO DEFECTIVE 25; Protein INCREASED SIZE EXCLUSION LIMIT 2; Protein PIGMENT DEFECTIVE 317", "protein_names_refseq": "DEAD/DEAH box helicase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70070)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;11779812;11874921;14593172;17601829;18431481;19423640;20434343;20541498;22106293;23660473;24265739;25561503;26147377;27862469;30833711", "class_list": "", "function": "RNA helicase involved in group II intron splicing (PubMed:26147377). Essential protein required during embryogenesis. Involved in post-transcriptional gene silencing. Modulates the determination of cell fate. Necessary for normal plasmodesmata (PD) development and aperture regulation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04538;Q94EZ6", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0010494 cytoplasmic stress granule;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0006397 mRNA processing;GO:0016554 cytidine to uridine editing;GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0016441 post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "B9DFG3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFK5-1", "uniprot_id": "RETIC_ARATH", "mass": 46629.0, "length": 432, "protein_name": "Protein RETICULATA, chloroplastic", "gene_name": "RE", "organism": "Arabidopsis", "refseq_name": "reticulata-like protein, putative (DUF3411)", "refseq_ac": "NP_001031506", "gene_names_uniprotkb": "RE; LCD1", "gene_names_refseq": "LCD1; LOWER CELL DENSITY 1; T8P21.23; T8P21_23", "protein_names_uniprotkb": "Protein RETICULATA, chloroplastic; Protein LOWER CELL DENSITY 1", "protein_names_refseq": "reticulata-like protein, putative (DUF3411)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G37860)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;12848826;14593172;16873448;19423640;23596191;27862469", "class_list": "", "function": "May play a role in leaf development. Required for leaf mesophyll cell division in the early stages of leaf organogenesis (PubMed:12848826, PubMed:16873448). Acts in a developmental pathway that involves PPT1/CUE1 but does not include ASE2/DOV1 (PubMed:16873448)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2Z2;Q8RXC6", "ec_number_list": "", "go_molecular_function": "GO:0000064 L-ornithine transmembrane transporter activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0000302 response to reactive oxygen species;GO:0009648 photoperiodism;GO:0015822 ornithine transport;GO:0009658 chloroplast organization;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "B9DFK5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFU2-1", "uniprot_id": "MAX1_ARATH", "mass": 59425.0, "length": 522, "protein_name": "Cytochrome P450 711A1", "gene_name": "CYP711A1", "organism": "Arabidopsis", "refseq_name": "cytochrome P450, family 711, subfamily A, polypeptide 1", "refseq_ac": "NP_565617", "gene_names_uniprotkb": "CYP711A1; MAX1; T19L18.2; T1D16.2; T1D16_2", "gene_names_refseq": "CYP711A1; MAX1; MORE AXILLARY BRANCHES 1; T1D16.19; T1D16_19; cytochrome P450; family 711; polypeptide 1; subfamily A", "protein_names_uniprotkb": "Cytochrome P450 711A1; 1.14.-.-; Protein MORE AXILLARY BRANCHES 1", "protein_names_refseq": "cytochrome P450, family 711, subfamily A, polypeptide 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26170); (ath:AT2G26340)", "pathway_count": 2, "publication_count": 12, "publication_id_list": "10617197;14593172;15737939;16387852;19423640;20667910;21119045;23204501;25425668;27194725;27862469;32399509", "class_list": "", "function": "Involved in the biosynthesis of strigolactone natural products, bioactive compounds promoting plant fitness and soil microbe interactions, but preventing shoot branching (PubMed:25425668, PubMed:32399509). Converts carlactone to carlactonoic acid by catalyzing consecutive oxidations at C-19 to convert the C-19 methyl group into carboxylic acid (PubMed:25425668). Prefers 11R-carlactone to 11S-carlactone as substrate (PubMed:25425668). Acts downstream of CCD7/MAX3 and CCD8/MAX4 in strigolactone signaling pathway and may be implicated in synthesis of carotenoid-derived branch regulators. Acts as a positive regulator of the flavonoid pathway in the late vegetative stage plant. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds (PubMed:15737939, PubMed:16387852)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64853;Q940L3", "ec_number_list": "1.14.-.-", "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0004497 monooxygenase activity;GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009926 auxin polar transport;GO:0009934 regulation of meristem structural organization;GO:0010223 secondary shoot formation;GO:0016117 carotenoid biosynthetic process;GO:0009963 positive regulation of flavonoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "B9DFU2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DFZ0-1", "uniprot_id": "NTH2_ARATH", "mass": 42415.0, "length": 386, "protein_name": "Endonuclease III homolog 2, chloroplastic", "gene_name": "NTH2", "organism": "Arabidopsis", "refseq_name": "endonuclease III 2", "refseq_ac": "NP_563752", "gene_names_uniprotkb": "NTH2; T20M3.18", "gene_names_refseq": "ATNTH2; NTH2; T20M3.18; T20M3_18; endonuclease III 2", "protein_names_uniprotkb": "Endonuclease III homolog 2, chloroplastic; 3.2.2.-; 4.2.99.18; AtNTH2; Bifunctional DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase 2; DNA glycosylase/AP lyase 2", "protein_names_refseq": "endonuclease III 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05900)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19372224;19423640;20466843;27862469", "class_list": "", "function": "Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines., [UniProtKB, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94EJ4;Q9MA35", "ec_number_list": "4.2.99.18;3.2.2.-;3.2.2.23", "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0019104 DNA N-glycosylase activity;GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006284 base-excision repair;GO:0006289 nucleotide-excision repair;GO:0006285 base-excision repair, AP site formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B9DFZ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DGT7-1", "uniprot_id": "TBA2_ARATH", "mass": 49541.0, "length": 450, "protein_name": "Tubulin alpha-2 chain", "gene_name": "TUBA2", "organism": "Arabidopsis", "refseq_name": "tubulin alpha-2 chain", "refseq_ac": "NP_175423", "gene_names_uniprotkb": "TUBA2; F2J10.11; TUA2", "gene_names_refseq": "F2J10.11; F2J10_11; TUA2; tubulin alpha-2 chain", "protein_names_uniprotkb": "Tubulin alpha-2 chain; 3.6.5.-", "protein_names_refseq": "tubulin alpha-2 chain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04820); (ath:AT1G50010)", "pathway_count": 2, "publication_count": 14, "publication_id_list": "11130712;14593172;1498608;19253305;19423640;22438062;22631563;23111157;23776212;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P29510", "ec_number_list": "3.6.5.2;3.6.5.-;3.6.5.3;3.6.5.4;3.6.5.5;3.6.5.n1", "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0005525 GTP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0045298 tubulin complex;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0000226 microtubule cytoskeleton organization;GO:0007017 microtubule-based process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "B9DGT7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DGY1-1", "uniprot_id": "AB1K7_ARATH", "mass": 78279.0, "length": 695, "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic", "gene_name": "ABC1K7; SIA1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_001319495", "gene_names_uniprotkb": "ABC1K7; SIA1; AtSIA1; F17A17.4; MLP3.15; SIA1; salt-induced ABC1 kinase 1", "gene_names_refseq": "AtSIA1; SIA1; salt-induced ABC1 kinase 1", "protein_names_uniprotkb": "Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic; 2.7.11.1; ABC1-LIKE KINASE 7; AtSIA1; Salt-induced ABC1 kinase 1, chloroplastic", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07700)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;19423640;22274653;22694836;23111157;24117441;25809944;27862469", "class_list": "", "function": "Involved in resistance to oxidative stress. Influences responses to reactive oxygen species (ROS) production. Regulates plastoglobules formation in thylakoids. Together with OSA1, regulates iron distribution within the chloroplast and mediates the oxidative stress response (PubMed:24117441). Together with ABC1K8, influences chloroplast lipid synthesis/accumulation and modulates chloroplast membrane composition in response to stress (PubMed:25809944)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8V3;Q8RXL3;Q93ZL4;Q9SFD6;Q9SSE3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0010287 plastoglobule", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0034599 cellular response to oxidative stress;GO:1901031 regulation of response to reactive oxygen species;GO:1990641 response to iron ion starvation;GO:0046467 membrane lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B9DGY1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DHQ0-1", "uniprot_id": "TBA5_ARATH", "mass": 49654.0, "length": 450, "protein_name": "Tubulin alpha-5 chain", "gene_name": "TUBA5", "organism": "Arabidopsis", "refseq_name": "tubulin alpha-5", "refseq_ac": "NP_197479", "gene_names_uniprotkb": "TUBA5; T29J13.200; TUA5", "gene_names_refseq": "ALPHA TUBULIN; T29J13.200; TUA5; tubulin alpha-5", "protein_names_uniprotkb": "Tubulin alpha-5 chain; 3.6.5.-", "protein_names_refseq": "tubulin alpha-5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19770); (ath:AT5G19780)", "pathway_count": 2, "publication_count": 9, "publication_id_list": "11130714;14593172;1498608;18433157;19245862;19376835;19423640;20466843;27862469", "class_list": "", "function": "Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P20363", "ec_number_list": "3.6.5.2;3.6.5.-;3.6.5.3;3.6.5.4;3.6.5.5;3.6.5.n1", "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0005525 GTP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0045298 tubulin complex;GO:0009506 plasmodesma", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0000226 microtubule cytoskeleton organization;GO:0007017 microtubule-based process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B9DHQ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9DHT4-1", "uniprot_id": "ARIA_ARATH", "mass": 78186.0, "length": 710, "protein_name": "ARM REPEAT PROTEIN INTERACTING WITH ABF2", "gene_name": "ARIA", "organism": "Arabidopsis", "refseq_name": "ARM repeat protein interacting with ABF2", "refseq_ac": "NP_850852", "gene_names_uniprotkb": "ARIA; F7K24.80; F7K24_80", "gene_names_refseq": "ARIA; ARM repeat protein interacting with ABF2; F7K24.80; F7K24_80", "protein_names_uniprotkb": "ARM REPEAT PROTEIN INTERACTING WITH ABF2; ARIA", "protein_names_refseq": "ARM repeat protein interacting with ABF2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19330)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15516505;15749712;17317660;19423640;20466843;26538092;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts as a positive regulator of ABA response via the modulation of the transcriptional activity of ABF2, a transcription factor which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. Negative regulator of seed germination and young seedling growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56ZQ9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009651 response to salt stress;GO:0009737 response to abscisic acid;GO:0010187 negative regulation of seed germination", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B9DHT4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B9TSP7-1", "uniprot_id": "FACR6_ARATH", "mass": 61626.0, "length": 548, "protein_name": "Fatty acyl-CoA reductase 6, chloroplastic", "gene_name": "FAR6", "organism": "Arabidopsis", "refseq_name": "fatty acid reductase 6", "refseq_ac": "NP_001326776", "gene_names_uniprotkb": "FAR6; T8M16.30", "gene_names_refseq": "AtFAR6; FAR6; fatty acid reductase 6", "protein_names_uniprotkb": "Fatty acyl-CoA reductase 6, chloroplastic; 1.2.1.84; AtFAR6", "protein_names_refseq": "fatty acid reductase 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56700)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;16980563;19062129;22166367;22189440;23505340;27862469", "class_list": "", "function": "Catalyzes the reduction of fatty acyl-CoA and -ACP (acyl carrier protein) substrates to fatty alcohols (PubMed:19062129, PubMed:22166367). Triggers the accumulation of C16 and, to a lower extent, of C18 fatty alcohols; converts palmitoyl-acyl carrier protein to the corresponding C16:0 alcohol with NAD(P)H as electron donor (PubMed:22166367). Also triggers the formation of some C16:0 and C18:0 aldehydes (PubMed:22166367). May be involved in the generation of C30 primary alcohol (PubMed:16980563)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1B1CQJ6;Q9LET6", "ec_number_list": "1.2.1.84", "go_molecular_function": "GO:0080019 alcohol-forming very long-chain fatty acyl-CoA reductase activity;GO:0102965 alcohol-forming long-chain fatty acyl-CoA reductase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009611 response to wounding;GO:0035336 long-chain fatty-acyl-CoA metabolic process;GO:0010345 suberin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "B9TSP7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGD9-1", "uniprot_id": "Y1756_ARATH", "mass": 96926.0, "length": 871, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07560", "gene_name": "F22G5.6", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F22G5.6", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At1g07560; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07560)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 12, "predicted_n_glycosites": 11, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 12, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNX9", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "C0LGD9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGF4-1", "uniprot_id": "FEI1_ARATH", "mass": 64916.0, "length": 591, "protein_name": "LRR receptor-like serine/threonine-protein kinase FEI 1", "gene_name": "FEI1", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_001185122", "gene_names_uniprotkb": "FEI1; 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T21E2.2", "gene_names_refseq": "LIK1; LysM RLK1-interacting kinase 1", "protein_names_uniprotkb": "Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat transmembrane protein kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14840)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10907853;14593172;17644812;18686298;20064227;23111157;23660473;23776212;25561503;27419465;27862469", "class_list": "", "function": "", "predicted_glycosites": 15, "predicted_n_glycosites": 15, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 15, "binding_glycan_count": 0, "secondary_ac_list": "Q94EW5;Q9LH71", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0045088 regulation of innate immune response;GO:0009861 jasmonic acid and ethylene-dependent systemic resistance", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "C0LGN2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGQ4-1", "uniprot_id": "MDIS2_ARATH", "mass": 75820.0, "length": 678, "protein_name": "Protein MALE DISCOVERER 2", "gene_name": "MDIS2", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_193599", "gene_names_uniprotkb": "MDIS2; F28A21.50; MRH1", "gene_names_refseq": "F28A21.50; F28A21_50; MRH1; morphogenesis of root hair 1", "protein_names_uniprotkb": "Protein MALE DISCOVERER 2; 2.7.11.1; AtMDIS2; Probable LRR receptor-like serine/threonine-protein kinase MRH1; Protein MORPHOGENESIS OF ROOT HAIR 1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18640)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;16367956;20064227;23776212;26863186;27862469", "class_list": "", "function": "Involved in the pollen tube perception of the female signal by binding an unidentified female attractant (PubMed:26863186). May be involved in the regulation of root hairs development (PubMed:16367956)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M0L9;Q9SN49", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0012505 endomembrane system;GO:0009507 chloroplast;GO:0090406 pollen tube", "go_biological_process": "GO:0048765 root hair cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGQ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGQ5-1", "uniprot_id": "GSO1_ARATH", "mass": 137288.0, "length": 1249, "protein_name": "LRR receptor-like serine/threonine-protein kinase GSO1", "gene_name": "GSO1", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat transmembrane protein kinase", "refseq_ac": "NP_193747", "gene_names_uniprotkb": "GSO1; F1C12.60; SGN3", "gene_names_refseq": "F1C12.60; F1C12_60; GASSHO1; GSO1", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase GSO1; 2.7.11.1; Protein GASSHO 1; Protein SCHENGEN 3", "protein_names_refseq": "Leucine-rich repeat transmembrane protein kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20140)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;18088309;20064227;24123341;25233277;27862469;28104889", "class_list": "", "function": "Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons (PubMed:18088309). In coordination with GSO2, regulates root growth through control of cell division and cell fate specification. Controls seedling root growth by modulating sucrose response after germination (PubMed:24123341). Receptor of the peptide hormones CIF1 and CIF2 required for contiguous Casparian strip diffusion barrier formation in roots (PubMed:28104889). Required for localizing CASP proteins into the Casparian strip following an uninterrupted, ring-like domain, to trigger endodermal differentiation and thus regulate potassium ion (K) homeostasis. Involved in the maintenance of water transport and root pressure. May also be involved in the regulation of suberin accumulation in the endodermis (PubMed:25233277)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 13, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 13, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 13, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 20, "binding_glycan_count": 0, "secondary_ac_list": "Q9SN91", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0048226 Casparian strip", "go_biological_process": "GO:0009611 response to wounding;GO:0045184 establishment of protein localization;GO:0055075 potassium ion homeostasis;GO:0035987 endodermal cell differentiation;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "C0LGQ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGQ9-1", "uniprot_id": "GHR1_ARATH", "mass": 113881.0, "length": 1053, "protein_name": "LRR receptor-like serine/threonine-protein kinase GHR1", "gene_name": "GHR1", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": "NP_001320016", "gene_names_uniprotkb": "GHR1; RCD7; T13K14.100", "gene_names_refseq": "GHR1; GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1; T13K14.100; T13K14_100", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase GHR1; 2.7.11.1; AtGHR1; Protein GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1; Protein RADICAL-INDUCED CELL DEATH 7", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20940)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;19376835;20064227;22730405;27694184;27862469;29463779;30361234", "class_list": "", "function": "Receptor kinase acting as an early component in abscisic acid (ABA) signaling (PubMed:22730405). Required for darkness, ABA, high CO(2) and hydrogen peroxide (H(2)O(2)) induction of S-type anion currents in guard cells leading to stomatal closure, possibly via the phosphorylation and activation of the anion channel SLAC1 and as a scaffolding component (PubMed:22730405, PubMed:27694184, PubMed:30361234). Seems to act in parallel with SRK2E/OST1 in the ABA signaling pathway which regulates stomatal movement (PubMed:22730405). Binds ATP (PubMed:30361234). Involved in the local and/or systemic stomatal responses (e.g. stomatal closure) to light stress (PubMed:29463779)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 14, "predicted_n_glycosites": 14, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 41, "reported_mutagensis": 13, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 14, "binding_glycan_count": 0, "secondary_ac_list": "F4JIJ5;Q9SUB9;T1T4Z8", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0007165 signal transduction;GO:0009416 response to light stimulus;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0071244 cellular response to carbon dioxide", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "C0LGQ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGR3-1", "uniprot_id": "RGI3_ARATH", "mass": 119529.0, "length": 1091, "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI3", "gene_name": "RGI3", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat receptor-like protein kinase family protein", "refseq_ac": "NP_567748", "gene_names_uniprotkb": "RGI3; M3E9.30; RGFR1; RGFR3", "gene_names_refseq": "M3E9.30; M3E9_30", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase RGI3; 2.7.11.1; Protein RECEPTOR OF RGF1 1; Protein RGF1 INSENSITIVE 3", "protein_names_refseq": "Leucine-rich repeat receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26540)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;17317660;20064227;27001831;27229311;27229312;27862469", "class_list": "", "function": "Together with RGI1, RGI2, RGI4 and RGI5, acts as a receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2) (PubMed:27001831, PubMed:27229311, PubMed:27229312). Links RGF peptides signal with their downstream components (PubMed:27001831, PubMed:27229311)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 2, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 2, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 2, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "O65580;Q8W556", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042277 peptide binding;GO:0001653 peptide receptor activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0010074 maintenance of meristem identity;GO:0010078 maintenance of root meristem identity;GO:0010082 regulation of root meristem growth;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "C0LGR3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGR9-1", "uniprot_id": "Y4312_ARATH", "mass": 75235.0, "length": 676, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g31250", "gene_name": "F8F16.70", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F8F16.70", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At4g31250; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31250)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;20064227;20466843;27862469", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 4, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O49575;Q0WRL7;Q67Z85", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "C0LGR9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGS2-1", "uniprot_id": "Y4361_ARATH", "mass": 123664.0, "length": 1136, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g36180", "gene_name": "F23E13.70", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": "NP_195341", "gene_names_uniprotkb": "F23E13.70", "gene_names_refseq": "F23E13.70; F23E13_70", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At4g36180; 2.7.11.1", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36180)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;14593172;17644812;20064227;20374526;25561503;27532006;27862469;29654922;30833711", "class_list": "", "function": "", "predicted_glycosites": 22, "predicted_n_glycosites": 21, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 22, "binding_glycan_count": 0, "secondary_ac_list": "O65510;Q8RXY8", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0090406 pollen tube", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "C0LGS2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGS3-1", "uniprot_id": "Y4372_ARATH", "mass": 84063.0, "length": 768, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g37250", "gene_name": "AP22.22; C7A10.110", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_195442", "gene_names_uniprotkb": "AP22.22; C7A10.110", "gene_names_refseq": "AP22.22; AP22_22", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At4g37250; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37250)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;19423640;20064227;25561503;26187819;27862469;9461215", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 8, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "B9DHS8;O23161;Q8VZC5", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "C0LGS3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGT1-1", "uniprot_id": "Y5129_ARATH", "mass": 68659.0, "length": 613, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g10290", "gene_name": "F18D22.60", "organism": "Arabidopsis", "refseq_name": "leucine-rich repeat transmembrane protein kinase family protein", "refseq_ac": "NP_196591", "gene_names_uniprotkb": "F18D22.60", "gene_names_refseq": "F18D22.60; F18D22_60", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At5g10290; 2.7.11.1", "protein_names_refseq": "leucine-rich repeat transmembrane protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10290)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;17317660;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q8RWK7;Q9LFT7", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0002213 defense response to insect", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGT1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGT6-1", "uniprot_id": "EFR_ARATH", "mass": 113353.0, "length": 1031, "protein_name": "LRR receptor-like serine/threonine-protein kinase EFR", "gene_name": "EFR", "organism": "Arabidopsis", "refseq_name": "EF-TU receptor", "refseq_ac": "NP_001318610", "gene_names_uniprotkb": "EFR; F7C8.70", "gene_names_refseq": "EF-TU receptor; EFR; F7C8.70; F7C8_70", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase EFR; 2.7.11.1; EF-Tu receptor; Elongation factor Tu receptor", "protein_names_refseq": "EF-TU receptor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20480)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130714;14593172;16713565;18158241;19062288;19717464;19763087;20064227;20410299;21693696;21768351;21789174;23572148;24625928;25561503;27317676;27862469;28011693;29649442", "class_list": "", "function": "Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs); phosphorylates BIK1 upon elicitation to regulate immune responses such as defense hormone expression (e.g. jasmonic acid (JA) and salicylic acid (SA)) (PubMed:29649442). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response while interaction with hopD2 decreases the phosphorylation level of EFR upon elf18 treatment. Specific endoplasmic reticulum quality control components (ERD2B, CRT3, UGGT and STT3A) are required for the biogenesis of EFR., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 18, "predicted_n_glycosites": 18, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 26, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 18, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWU8;Q8S9I3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0038023 signaling receptor activity;GO:0106310 protein serine kinase activity;GO:0019199 transmembrane receptor protein kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0016045 detection of bacterium;GO:0009755 hormone-mediated signaling pathway;GO:0002764 immune response-regulating signaling pathway;GO:0002237 response to molecule of bacterial origin;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "C0LGT6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGU0-1", "uniprot_id": "PRK1_ARATH", "mass": 73483.0, "length": 662, "protein_name": "Pollen receptor-like kinase 1", "gene_name": "PRK1", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_198389", "gene_names_uniprotkb": "PRK1; PRKD; RLK; T26D22.9", "gene_names_refseq": "PRK1; T26D22.9; T26D22_9; pollen receptor like kinase 1", "protein_names_uniprotkb": "Pollen receptor-like kinase 1; 2.7.11.1; AtPRK1; LRR receptor-like serine/threonine-protein kinase RLK", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35390)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12139002;18591430;20064227;23024212;27862469", "class_list": "", "function": "Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65240", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045177 apical part of cell;GO:0016324 apical plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGU0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGU7-1", "uniprot_id": "MDIS1_ARATH", "mass": 78476.0, "length": 695, "protein_name": "Protein MALE DISCOVERER 1", "gene_name": "MDIS1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "MDIS1; K15I22.4; K15I22_4", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein MALE DISCOVERER 1; 2.7.11.1; AtMDIS1; Probable LRR receptor-like serine/threonine-protein kinase At5g45840", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 5, "publication_id_list": "10048488;11130714;20064227;26863186;27862469", "class_list": "", "function": "Involved in the pollen tube perception of the female signal., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "F4KEN6;Q9FJ52", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0009507 chloroplast;GO:0090406 pollen tube", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0LGU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGV1-1", "uniprot_id": "RGI2_ARATH", "mass": 123612.0, "length": 1135, "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI2", "gene_name": "RGI2", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat transmembrane protein kinase family protein", "refseq_ac": "NP_199705", "gene_names_uniprotkb": "RGI2; K19E20.5; RCH1; RGFR2; RGFR3", "gene_names_refseq": "K19E20.5; K19E20_5", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase RGI2; 2.7.11.1; Protein RECEPTOR OF RGF1 3; Protein RGF1 INSENSITIVE 2; Protein ROOT CLAVATA-HOMOLOG1 1", "protein_names_refseq": "Leucine-rich repeat transmembrane protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48940)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10470850;12932329;17363254;18980654;20064227;27001831;27229311;27229312;27862469;29339500", "class_list": "", "function": "Together with RGI1, RGI3, RGI4 and RGI5, acts as a receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2) (PubMed:27001831, PubMed:27229311, PubMed:27229312). Links RGF peptides signal with their downstream components (PubMed:27001831, PubMed:27229311)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 16, "predicted_n_glycosites": 16, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 16, "binding_glycan_count": 0, "secondary_ac_list": "Q84RP6;Q9FI77", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042277 peptide binding;GO:0001653 peptide receptor activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0010074 maintenance of meristem identity;GO:0010078 maintenance of root meristem identity;GO:0010082 regulation of root meristem growth;GO:0010449 root meristem growth;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "C0LGV1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGW6-1", "uniprot_id": "ERL1_ARATH", "mass": 106486.0, "length": 966, "protein_name": "LRR receptor-like serine/threonine-protein kinase ERL1", "gene_name": "ERL1", "organism": "Arabidopsis", "refseq_name": "ERECTA-like 1", "refseq_ac": "NP_201029", "gene_names_uniprotkb": "ERL1; ERECTA-like 1; MMI9.14; MMI9_14", "gene_names_refseq": "ERECTA-like 1; ERL1; MMI9.14; MMI9_14", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase ERL1; 2.7.11.1; Protein ERECTA-like kinase 1", "protein_names_refseq": "ERECTA-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G62230)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10718197;11130714;11910074;14985254;16002616;17652352;20064227;22241782;23881395;26320950;27862469;28536146", "class_list": "", "function": "Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Redundantly involved with ER in procambial development regulation. Forms a functional ligand-receptor pair with EPF1 (AC Q8S8I4) (PubMed:22241782). Forms a constitutive complex with TMM involved in the recognition of the stomatal regulatory peptides EPF1, EPF2 and EPFL9/STOMAGEN (PubMed:28536146)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "Q6XAT3;Q8GXT4;Q9LVB3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005102 signaling receptor binding;GO:0005524 ATP binding;GO:0033612 receptor serine/threonine kinase binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009553 embryo sac development;GO:0010103 stomatal complex morphogenesis;GO:0048481 plant ovule development;GO:0090567 reproductive shoot system development;GO:0048827 phyllome development", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "C0LGW6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LGX3-1", "uniprot_id": "HSL2_ARATH", "mass": 110710.0, "length": 993, "protein_name": "LRR receptor-like serine/threonine-protein kinase HSL2", "gene_name": "HSL2", "organism": "Arabidopsis", "refseq_name": "HAESA-like 2", "refseq_ac": "NP_201372", "gene_names_uniprotkb": "HSL2; F6H11.160; MPA24.6", "gene_names_refseq": "HAESA-like 2; HSL2; MPA24.6; MPA24_6", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase HSL2; 2.7.11.1; Protein HAESA-LIKE2", "protein_names_refseq": "HAESA-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65710)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;18660431;18809915;20064227;27862469;9628582", "class_list": "", "function": "Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands., [UniProtKB, PubMed]", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "O49544", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0050829 defense response to Gram-negative bacterium;GO:0010468 regulation of gene expression;GO:0010102 lateral root morphogenesis;GO:0060866 leaf abscission", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LGX3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C0LU16-1", "uniprot_id": "MED21_ARATH", "mass": 15041.0, "length": 139, "protein_name": "Mediator of RNA polymerase II transcription subunit 21", "gene_name": "MED21", "organism": "Arabidopsis", "refseq_name": "mediator 21", "refseq_ac": "NP_192387", "gene_names_uniprotkb": "MED21; MED21_1; SRB7; T4B21.7", "gene_names_refseq": "MED21; T4B21.8; T4B21_8; mediator 21", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 21; Mediator complex subunit 21; RNAPII complex component SRB7", "protein_names_refseq": "mediator 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04780)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;17560376;19286969;22021418;27862469", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for embryo development and defense against necrotrophic fungal pathogens., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WP9;Q9M0Z8;Q9ZS95", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016592 mediator complex;GO:0043078 polar nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "C0LU16-1", "record_type": "protein" }, { "uniprot_canonical_ac": "C8KI33-1", "uniprot_id": "SUV2_ARATH", "mass": 72806.0, "length": 646, "protein_name": "Protein SENSITIVE TO UV 2", "gene_name": "SUV2", "organism": "Arabidopsis", "refseq_name": "protein dimerization", "refseq_ac": "NP_001331674", "gene_names_uniprotkb": "SUV2; ATRIP; HUS2; MRA19.1", "gene_names_refseq": "MRA19.1; MRA19_1; SENSITIVE TO UV 2; SUV2", "protein_names_uniprotkb": "Protein SENSITIVE TO UV 2; ATR interacting protein; AtATRIP; Protein HYDROXYUREA-SENSITIVE 2", "protein_names_refseq": "protein dimerization", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45610)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "19619158;19619159;22060019;25561503;27862469;28154133;28556304;9734815", "class_list": "", "function": "Required for tolerance to DNA-damaging and cross-linking agents such as UVB irradiation, gamma-radiation, aphidicolin, ionizing radiation and hydroxyurea (HU), cisplatin (CDDP) and mitomycin C (MMC) (PubMed:19619158, PubMed:19619159, PubMed:28556304). Involved in cell-cycle G2/M arrest in response to DNA damage (PubMed:19619158, PubMed:19619159). Required for aluminum-dependent gene regulation and root growth inhibition in an ATR-dependent manner by halting cell cycle progression and triggering loss of the quiescent center (QC) (PubMed:28556304)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 4, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 4, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 4, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8BEL4;Q9FK80", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0010332 response to gamma radiation;GO:0006974 DNA damage response;GO:0010212 response to ionizing radiation;GO:0010044 response to aluminum ion;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "C8KI33-1", "record_type": "protein" }, { "uniprot_canonical_ac": "D1KF50-1", "uniprot_id": "SRS2L_ARATH", "mass": 129430.0, "length": 1147, "protein_name": "ATP-dependent DNA helicase SRS2-like protein At4g25120", "gene_name": "SRS2", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_001320059", "gene_names_uniprotkb": "SRS2; F13M23.260", "gene_names_refseq": "ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2; ATSRS2; F24A6.8; SRS2; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2", "protein_names_uniprotkb": "ATP-dependent DNA helicase SRS2-like protein At4g25120; 5.6.2.4; AtSRS2; DNA 3'-5' helicase At4g25120", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25120)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;19767619;21081662;27862469", "class_list": "", "function": "ATP-dependent 3'- to 5'-DNA helicase that could disrupt recombinogenic DNA intermediates and facilitate single strand annealing. Unwinds nicked and partial Holliday junctions in vitro. Anneals two single strands into a dsDNA molecule in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JSH5;Q9SW14", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003678 DNA helicase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006310 DNA recombination;GO:0000725 recombinational repair", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "D1KF50-1", "record_type": "protein" }, { "uniprot_canonical_ac": "D2WL32-1", "uniprot_id": "GLGB3_ARATH", "mass": 103525.0, "length": 899, "protein_name": "1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic", "gene_name": "SBE3", "organism": "Arabidopsis", "refseq_name": "Alpha amylase family protein", "refseq_ac": "NP_001154629", "gene_names_uniprotkb": "SBE3; BE1; EMB2729; MQC12.20", "gene_names_refseq": "BE1; BRANCHING ENZYME 1; EMB2729; EMBRYO DEFECTIVE 2729", "protein_names_uniprotkb": "1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic; 2.4.1.18; AtBE1; AtSBE III; Branching enzyme 1; Protein EMBRYO DEFECTIVE 2729; Starch-branching enzyme 3", "protein_names_refseq": "Alpha amylase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20440)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;11910074;17028209;17698298;18431481;20377688;27862469", "class_list": "", "function": "Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Essential during embryogenesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JEP1;Q8GWK4;Q9LTP8", "ec_number_list": "", "go_molecular_function": "GO:0003844 1,4-alpha-glucan branching enzyme activity;GO:0043169 cation binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009501 amyloplast;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0009791 post-embryonic development;GO:0005978 glycogen biosynthetic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "D2WL32-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Y4A3-1", "uniprot_id": "SPHK2_ARATH", "mass": 53890.0, "length": 481, "protein_name": "Sphingosine kinase 2", "gene_name": "SPHK1; SPHK2", "organism": "Arabidopsis", "refseq_name": "Diacylglycerol kinase family protein", "refseq_ac": "NP_001190787", "gene_names_uniprotkb": "SPHK1; SPHK2; F18E5.160; F18E5_160; sphingosine kinase 1", "gene_names_refseq": "SPHK2; sphingosine kinase 2", "protein_names_uniprotkb": "Sphingosine kinase 2; 2.7.1.91", "protein_names_refseq": "Diacylglycerol kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21534)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;21330371;22275366;27862469", "class_list": "", "function": "Involved in the production of sphingolipid metabolites. Phosphorylates sphingosine and various l sphingoid long-chain base (LCB) products, such as phytosphingosine (PHS, 4-hydroxysphinganine), 4-hydroxy-8-sphingenine, 4,8-sphingadienine and D-erythro-dihydrosphingosine, but has a very few activity toward D,L-threo- dihydrosphingosine. Is required for abscisic acid (ABA) signaling that mediates stomatal closure, inhibition of seed germination and root elongation. May function upstream of PLDALPHA1 and phosphatidic acid (PA) in an amplification response to ABA that mediates stomatal closure., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65419", "ec_number_list": "2.7.1.91", "go_molecular_function": "GO:0001727 lipid kinase activity;GO:0005524 ATP binding;GO:0070300 phosphatidic acid binding;GO:0008481 sphingosine kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009705 plant-type vacuole membrane;GO:0016020 membrane", "go_biological_process": "GO:0006665 sphingolipid metabolic process;GO:0046512 sphingosine biosynthetic process;GO:0009737 response to abscisic acid;GO:0071215 cellular response to abscisic acid stimulus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F2Y4A3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HPR5-1", "uniprot_id": "DRP5A_ARATH", "mass": 90616.0, "length": 817, "protein_name": "Dynamin-related protein 5A", "gene_name": "DRP5A", "organism": "Arabidopsis", "refseq_name": "Dynamin related protein 5A", "refseq_ac": "NP_175722", "gene_names_uniprotkb": "DRP5A; F8L10.1", "gene_names_refseq": "DRP5A; Dynamin related protein 5A; F8L10.1; F8L10_1", "protein_names_uniprotkb": "Dynamin-related protein 5A; Protein ARC5-like", "protein_names_refseq": "Dynamin related protein 5A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53140)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14750516;14993207;18809930;24924143;27862469", "class_list": "", "function": "Probable microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May play a role in cell division., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNN8", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0016020 membrane;GO:0009504 cell plate;GO:0009524 phragmoplast", "go_biological_process": "GO:0000911 cytokinesis by cell plate formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4HPR5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HPZ9-1", "uniprot_id": "LIG6_ARATH", "mass": 156322.0, "length": 1396, "protein_name": "DNA ligase 6", "gene_name": "LIG6", "organism": "Arabidopsis", "refseq_name": "DNA LIGASE 6", "refseq_ac": "NP_176845", "gene_names_uniprotkb": "LIG6; F4N21.14", "gene_names_refseq": "AtLIG6; DNA LIGASE 6; F4N21.14; F4N21_14; LIG6", "protein_names_uniprotkb": "DNA ligase 6; 6.5.1.1; AtLIG6; DNA ligase VI; Ligase 1", "protein_names_refseq": "DNA LIGASE 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66730)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11948185;15155891;20584150;23111157;25641249;26074930;27862469", "class_list": "", "function": "DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (Probable). Required to maintain seed viability (e.g. longevity and storability) and during seed germination, probably by repairing DNA damage accumulated during seed development, storage and/or imbibition. Facilitates seed germination in cold conditions (2 degrees Celsius) and under oxidative stress (e.g. menadione, a genotoxic agent). Involved in repair of X-ray-induced damage (PubMed:20584150)., [UniProtKB, PubMed]; Limits stable root transformation by A.tumefaciens T-DNA., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9M5", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003910 DNA ligase (ATP) activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0071897 DNA biosynthetic process;GO:0006273 lagging strand elongation;GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0006979 response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4HPZ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HQ84-1", "uniprot_id": "COG3_ARATH", "mass": 88609.0, "length": 784, "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "organism": "Arabidopsis", "refseq_name": "sec34-like family protein", "refseq_ac": "NP_001117595", "gene_names_uniprotkb": "COG3; T9L24.37", "gene_names_refseq": "T9L24.37; T9L24_37", "protein_names_uniprotkb": "Conserved oligomeric Golgi complex subunit 3; COG complex subunit 3; Component of oligomeric Golgi complex 3", "protein_names_refseq": "sec34-like family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73430)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;25561503;27448097;27862469", "class_list": "", "function": "Acts as a component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking (PubMed:27448097). Involved in pollen tube growth by modulating Golgi morphology and vesicle trafficking homeostasis leading to the deposition of cell wall components and proteins at the pollen tube tip (PubMed:27448097). Required for sporophytic development (PubMed:27448097)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L744;Q9FX37", "ec_number_list": "", "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0140312 cargo adaptor activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0005801 cis-Golgi network;GO:0017119 Golgi transport complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0007030 Golgi organization;GO:0048193 Golgi vesicle transport;GO:0006891 intra-Golgi vesicle-mediated transport;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4HQ84-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HQA1-1", "uniprot_id": "PAF1_ARATH", "mass": 67338.0, "length": 589, "protein_name": "Protein PAF1 homolog", "gene_name": "VIP2", "organism": "Arabidopsis", "refseq_name": "hydroxyproline-rich glycoprotein family protein", "refseq_ac": "NP_178091", "gene_names_uniprotkb": "VIP2; ELF7; F19K16.29; F20B17.16", "gene_names_refseq": "EARLY FLOWERING 7; ELF7; F19K16.29; F19K16_29", "protein_names_uniprotkb": "Protein PAF1 homolog; Protein EARLY FLOWERING 7; Protein VERNALIZATION INDEPENDENCE 2", "protein_names_refseq": "hydroxyproline-rich glycoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79730)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;12750345;14593172;15472079;15520273;20363855;20466843;21799800;23111157;23572148;25561503;27862469", "class_list": "", "function": "Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressors and MAD-box genes FLC, AGL27/FLM and AGL31/MAF2. Required for histone H3 trimethylation on 'Lys-4' H3K4me3 at the FLC and AGL27/FLM loci (PubMed:15520273). Involved in the control of seed dormancy and germination (PubMed:21799800)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RW91;Q9CA82;Q9MA04", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0000993 RNA polymerase II complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016593 Cdc73/Paf1 complex", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II;GO:0000724 double-strand break repair via homologous recombination;GO:0009908 flower development;GO:0009910 negative regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4HQA1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HRT5-1", "uniprot_id": "CRWN1_ARATH", "mass": 129093.0, "length": 1132, "protein_name": "Protein CROWDED NUCLEI 1", "gene_name": "CRWN1", "organism": "Arabidopsis", "refseq_name": "little nuclei1", "refseq_ac": "NP_176892", "gene_names_uniprotkb": "CRWN1; F1N21.5; KAKU2; LINC1", "gene_names_refseq": "(Japanese for nucleus) 2; AtLINC1; CROWDED NUCLEI 1; CRWN1; F1N21.5; KAKU2; LINC1; LITTLE NUCLEI1", "protein_names_uniprotkb": "Protein CROWDED NUCLEI 1; Protein KAKU2; Protein LITTLE NUCLEI 1", "protein_names_refseq": "little nuclei1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67230)", "pathway_count": 1, "publication_count": 31, "publication_id_list": "11130712;11910074;17873096;18433157;18463617;19245862;19253305;19376835;20466843;21768351;23111157;23328941;23396599;23572148;23660473;23776212;24043427;24308514;24667841;24824484;25561503;25740919;26091701;26187819;27419465;27532006;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Required for nucleus structure organization (e.g. size and shape) (PubMed:17873096, PubMed:23396599, PubMed:24308514, PubMed:24824484)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 36, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WKV7;Q8GZ88;Q9FYH0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005654 nucleoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0097298 regulation of nucleus size;GO:0006997 nucleus organization", "synthesized_glycan_count": 0, "hit_score": 3.2, "record_id": "F4HRT5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HRV8-1", "uniprot_id": "ASY1_ARATH", "mass": 67211.0, "length": 596, "protein_name": "Meiosis-specific protein ASY1", "gene_name": "ASY1", "organism": "Arabidopsis", "refseq_name": "DNA-binding HORMA family protein", "refseq_ac": "NP_564896", "gene_names_uniprotkb": "ASY1; F1N21.20", "gene_names_refseq": "ASY1; ASYNAPTIC 1; ATASY1; F1N21.19", "protein_names_uniprotkb": "Meiosis-specific protein ASY1; AtASY1; Protein ASYNAPTIC 1", "protein_names_refseq": "DNA-binding HORMA family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67370)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10855496;11130712;12186950;17785529;18504359;22319460;23820729;27862469;31556459;32558910", "class_list": "", "function": "Required for normal meiosis in male and female gametophytes. Plays a crucial role in coordinating the activity of DMC1, a key member of the homologous recombination machinery (PubMed:18504359). Acts at the interface between the developing chromosome axes and the recombination machinery to ensure DMC1-mediated interhomolog recombination (PubMed:17785529)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FYF5;Q9FYF6;Q9M6R5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000794 condensed nuclear chromosome;GO:0005654 nucleoplasm;GO:0000785 chromatin;GO:0005694 chromosome;GO:0000795 synaptonemal complex", "go_biological_process": "GO:0051598 meiotic recombination checkpoint signaling;GO:0007130 synaptonemal complex assembly;GO:0007129 homologous chromosome pairing at meiosis;GO:0051026 chiasma assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4HRV8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HT77-1", "uniprot_id": "RBA1_ARATH", "mass": 42118.0, "length": 363, "protein_name": "Disease resistance protein RBA1", "gene_name": "RBA1", "organism": "Arabidopsis", "refseq_name": "Toll-Interleukin-Resistance (TIR) domain family protein", "refseq_ac": "NP_175170", "gene_names_uniprotkb": "RBA1; T3F24.3", "gene_names_refseq": "T3F24.3; T3F24_3", "protein_names_uniprotkb": "Disease resistance protein RBA1; 3.2.2.-; 3.2.2.6; NAD(+) hydrolase RBA1; NADP(+) hydrolase RBA1; RBA1; Response to HopBA1 protein", "protein_names_refseq": "Toll-Interleukin-Resistance (TIR) domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G47370)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;27862469;28137883;31439793", "class_list": "", "function": "Disease resistance (R) protein that specifically recognizes the HopBA1 type III effector protein from P.syringae, and triggers cell death (PubMed:28137883). Acts as a NAD(+) hydrolase (NADase): in response to pathogen-recognition, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439793). In addition to ADPR, also generates a cyclization variant of cyclic ADPR (cADPR), termed v-cADPR, for which the cyclizing bond is unknown (PubMed:31439793). Also able to hydrolyze NADP(+), but not other NAD(+)-related molecules (PubMed:31439793)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FX07", "ec_number_list": "3.2.2.6;3.2.2.-", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0003953 NAD+ nucleosidase activity;GO:0050135 NADP+ nucleosidase activity;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0019677 NAD+ catabolic process;GO:0006171 cAMP biosynthetic process;GO:0006182 cGMP biosynthetic process;GO:0006952 defense response;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4HT77-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HTH8-1", "uniprot_id": "KTN82_ARATH", "mass": 129175.0, "length": 1181, "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2", "gene_name": "KTN80.2", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": "NP_001185277", "gene_names_uniprotkb": "KTN80.2; DWA3; F11P17.7", "gene_names_refseq": "DWA3; DWD hypersensitive to ABA 3; F11P17.7; F11P17_7", "protein_names_uniprotkb": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2; DDB1 binding WD40 hypersensitive to ABA 3; DWD hypersensitive to ABA 3", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G61210)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;18223036;18552200;20466843;21421380;23328941;23572148;23660473;25561503;27862469;28978669", "class_list": "", "function": "May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). Microtubule severing may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669). Negative regulator of abscisic acid (ABA) responses (PubMed:21421380). May function as a substrate receptor for cullin-RING ubiquitin ligase 4 complexes (CRL4), a family of E3 ligases involved in protein degradation (PubMed:21421380)., [UniProtKB, HAMAP, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8AV57;F4HTH9;O22725", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0008352 katanin complex;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0015630 microtubule cytoskeleton;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0051013 microtubule severing;GO:0009651 response to salt stress;GO:0007019 microtubule depolymerization;GO:0009737 response to abscisic acid;GO:0051510 regulation of unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4HTH8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HTM3-1", "uniprot_id": "GCS1_ARATH", "mass": 97634.0, "length": 852, "protein_name": "Mannosyl-oligosaccharide glucosidase GCS1", "gene_name": "GCS1", "organism": "Arabidopsis", "refseq_name": "glucosidase 1", "refseq_ac": "NP_001031247", "gene_names_uniprotkb": "GCS1; F12B7.4; KNF; MUC; RSW; T1F15.4", "gene_names_refseq": "GCS1; KNF; KNOPF; T1F15.4; T1F15_4; glucosidase 1", "protein_names_uniprotkb": "Mannosyl-oligosaccharide glucosidase GCS1; 3.2.1.106; Alpha-glucosidase 1; Glucosidase 1; Protein KNOPF; Protein MUNCHKIN", "protein_names_refseq": "glucosidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67490)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11230125;11901167;11910074;17138701;18503769;19995436;23111157;27862469", "class_list": "", "function": "Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor. Required for the accumulation of seed storage proteins, the formation of protein bodies, cell differentiation, cellulose biosynthesis and organization (in cell walls), cell shape determination and organization (e.g. epidermal cells), and embryo development. Involved in root development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "F4HTM2;O64796;Q8GWC8;Q940D4;Q9C5B4;Q9CAG7", "ec_number_list": "3.2.1.106;3.2.1.-", "go_molecular_function": "GO:0004558 alpha-1,4-glucosidase activity;GO:0004573 Glc3Man9GlcNAc2 oligosaccharide glucosidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006487 protein N-linked glycosylation;GO:0009311 oligosaccharide metabolic process;GO:0010053 root epidermal cell differentiation;GO:0090627 plant epidermal cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4HTM3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HU51-1", "uniprot_id": "ACH2_ARATH", "mass": 48155.0, "length": 427, "protein_name": "Acyl-CoA hydrolase 2", "gene_name": "ACH2", "organism": "Arabidopsis", "refseq_name": "acyl-CoA thioesterase II", "refseq_ac": "NP_563632", "gene_names_uniprotkb": "ACH2; T1N6.10; T1N6.9", "gene_names_refseq": "T1N6.10; T1N6.9; T1N6_10; T1N6_9", "protein_names_uniprotkb": "Acyl-CoA hydrolase 2; 3.1.2.20; 3.1.2.2; ACT-II; Acyl-CoA thioesterase II; AtACH2; Hexadecanoyl-CoA hydrolase ACH2", "protein_names_refseq": "acyl-CoA thioesterase II", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01710)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11171266;11910074;14593172;14660652;23505340;27862469", "class_list": "", "function": "Catalyzes the hydrolysis of acyl-CoAs into free fatty acids and coenzyme A (CoASH), regulating their respective intracellular levels (PubMed:11171266, PubMed:14660652). Active with both medium chain and long chain acyl-CoAs (e.g. 12:0-CoA, 14:0-CoA, 16:0-CoA, 18:0-CoA, 16:1-CoA, 18:1-CoA, 18:2-CoA and 20:4-CoA) as substrates, palmitoleoyl-CoA (16:1-CoA) being the favorite substrate (PubMed:11171266, PubMed:14660652)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56XD4;Q8GYW7;Q9LQ87;Q9LQ88", "ec_number_list": "3.1.2.2;3.1.2.20", "go_molecular_function": "GO:0047617 fatty acyl-CoA hydrolase activity;GO:0052815 medium-chain fatty acyl-CoA hydrolase activity;GO:0052816 long-chain fatty acyl-CoA hydrolase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005782 peroxisomal matrix", "go_biological_process": "GO:0006637 acyl-CoA metabolic process;GO:0009062 fatty acid catabolic process;GO:0051289 protein homotetramerization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4HU51-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVG8-1", "uniprot_id": "CSK_ARATH", "mass": 66843.0, "length": 611, "protein_name": "Chloroplast sensor kinase, chloroplastic", "gene_name": "CSK", "organism": "Arabidopsis", "refseq_name": "chloroplast sensor kinase", "refseq_ac": "NP_564908", "gene_names_uniprotkb": "CSK; F12A21.3", "gene_names_refseq": "CSK; F12A21.3; F12A21_3; chloroplast sensor kinase", "protein_names_uniprotkb": "Chloroplast sensor kinase, chloroplastic; 2.7.10.2", "protein_names_refseq": "chloroplast sensor kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67840)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;14993207;18632566;21554328;22039472;23111157;23754813;27862469;31925322", "class_list": "", "function": "Sensor kinase that senses the plastoquinone (PQ) redox state involved in stoichiometry adjustment of both photosystems (e.g. long-term adaptation via transcriptional regulation of reaction center genes of photosystems I and II) and state transitions (e.g. short-term adaptation involving reversible post-translational phosphorylation of light-harvesting complex II, LHC II), thus linking photosynthesis with gene expression in chloroplasts (PubMed:18632566, PubMed:22039472). Autophosphorylates, probably on a tyrosine residue (PubMed:18632566). Probably phosphorylates SIGA/SIG1 in response to plastoquinone redox state modification (PubMed:23754813). Reduced PQ suppresses its autophosphorylation activity. Represses expression of a number of chloroplast-encoded genes (PubMed:31925322)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HVG9;Q94AA5;Q9FXE6", "ec_number_list": "2.7.11.1;2.7.10.-;2.7.10.2;2.7.10.1;2.7.12.1;2.7.12.2", "go_molecular_function": "GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0046872 metal ion binding;GO:0051538 3 iron, 4 sulfur cluster binding;GO:0048038 quinone binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0046777 protein autophosphorylation;GO:0010468 regulation of gene expression;GO:0010109 regulation of photosynthesis;GO:0051776 detection of redox state;GO:0080005 photosystem stoichiometry adjustment", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4HVG8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HVJ3-1", "uniprot_id": "POD1_ARATH", "mass": 70405.0, "length": 624, "protein_name": "Protein POLLEN DEFECTIVE IN GUIDANCE 1", "gene_name": "POD1", "organism": "Arabidopsis", "refseq_name": "POLLEN DEFECTIVE IN GUIDANCE-like protein", "refseq_ac": "NP_176963", "gene_names_uniprotkb": "POD1; T23K23.19", "gene_names_refseq": "POD1; POLLEN DEFECTIVE IN GUIDANCE 1; T23K23.19; T23K23_19", "protein_names_uniprotkb": "Protein POLLEN DEFECTIVE IN GUIDANCE 1", "protein_names_refseq": "POLLEN DEFECTIVE IN GUIDANCE-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67960)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;21954464;25561503;27862469", "class_list": "", "function": "Probable component of the calreticulin 3 (CRT3) complex, acting probably as a co-chaperone involved in protein retention in the endoplasmic reticulum lumen. Required for micropylar pollen tube guidance. Plays an essential role in cell plate orientation or positioning in early embryo patterning., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZM8;Q9C9W2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005788 endoplasmic reticulum lumen;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0035437 maintenance of protein localization in endoplasmic reticulum;GO:0009793 embryo development ending in seed dormancy;GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4HVJ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HW51-1", "uniprot_id": "CHR20_ARATH", "mass": 168176.0, "length": 1479, "protein_name": "Protein CHROMATIN REMODELING 20", "gene_name": "ATRX", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_001184937", "gene_names_uniprotkb": "ATRX; CHR20; F22O13.8", "gene_names_refseq": "ATRX; CHR20; F22O13.8; F22O13_8", "protein_names_uniprotkb": "Protein CHROMATIN REMODELING 20; 3.6.4.-; ATP-dependent helicase ATRX; AtCHR20; Transcriptional regulator ATRX; X-linked helicase II", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08600)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;16547115;24265739;25561503;27862469", "class_list": "", "function": "Involved in transcriptional regulation and chromatin remodeling. Facilitates DNA replication in multiple cellular environments and is required for efficient replication of a subset of genomic loci. Binds to DNA tandem repeat sequences in both telomeres and euchromatin and in vitro binds DNA quadruplex structures. May help stabilizing G-rich regions into regular chromatin structures by remodeling G4 DNA and incorporating H3.3-containing nucleosomes (By similarity). Involved in DNA repair of gamma-irradiation-mediated damages (PubMed:16547115)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HW52;O04048;Q9FRS5", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000781 chromosome, telomeric region", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006325 chromatin organization;GO:0043007 maintenance of rDNA;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4HW51-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HXL0-1", "uniprot_id": "PLIP2_ARATH", "mass": 78346.0, "length": 713, "protein_name": "Phospholipase A1 PLIP2, chloroplastic", "gene_name": "PLIP2", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": "NP_563660", "gene_names_uniprotkb": "PLIP2; T14P4.6", "gene_names_refseq": "T14P4.6; T14P4_6", "protein_names_uniprotkb": "Phospholipase A1 PLIP2, chloroplastic; 3.1.1.26; 3.1.1.32; Galactolipase PLIP2; Protein PLASTID LIPASE 2", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02660)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;19423640;27862469;29666162", "class_list": "", "function": "Sn-1-specific phospholipase A1 that catalyzes the initial step of oxylipins and jasmonate (JA) biosynthesis. Hydrolyzes polyunsaturated acyl groups preferentially from chloroplastic monogalactosyldiacylglycerol (MGDG). May function downstream of abscisic acid (ABA) and provide a link between ABA-mediated abiotic stress responses and oxylipin and JA signalings. In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipids monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol (DGDG), the sulfolipid sulfoquinovosyldiacylglycerol (SQDG), and the phoshpolipids phosphatidylcholine (PC), and phosphatidylglycerol (PG)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DI25;Q8L739;Q94AE2;Q9FWY4", "ec_number_list": "3.1.1.32;3.1.1.26", "go_molecular_function": "GO:0008970 phospholipase A1 activity;GO:0047714 galactolipase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0002213 defense response to insect;GO:0031349 positive regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4HXL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HXU3-1", "uniprot_id": "KNATM_ARATH", "mass": 16439.0, "length": 142, "protein_name": "Protein KNATM", "gene_name": "KNATM", "organism": "Arabidopsis", "refseq_name": "KNOX meinox protein", "refseq_ac": "NP_001154340", "gene_names_uniprotkb": "KNATM; F10B6.16", "gene_names_refseq": "F10B6.16; F10B6_16; KNATM; KNOX Arabidopsis thaliana meinox", "protein_names_uniprotkb": "Protein KNATM; KNOX Arabidopsis thaliana MEINOX protein", "protein_names_refseq": "KNOX meinox protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14760)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;18398054;23271976;27862469", "class_list": "", "function": "Transcriptional regulator involved in leaf proximal/distal patterning. May act by sequestering BELL transcription factors., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HXU1;F4HXU2;Q9LQV5", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0010589 leaf proximal/distal pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4HXU3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HXY7-1", "uniprot_id": "PSS1_ARATH", "mass": 49518.0, "length": 425, "protein_name": "CDP-diacylglycerol--serine O-phosphatidyltransferase 1", "gene_name": "PSS1", "organism": "Arabidopsis", "refseq_name": "phosphatidyl serine synthase family protein", "refseq_ac": "NP_001322771", "gene_names_uniprotkb": "PSS1; AtPSS1; F9L1.4; F9L1_4; phosphatidylserine synthase 1", "gene_names_refseq": "AtPSS1; F9L1.4; F9L1_4; PSS1; phosphatidylserine synthase 1", "protein_names_uniprotkb": "CDP-diacylglycerol--serine O-phosphatidyltransferase 1; 2.7.8.8; Phosphatidylserine synthase 1", "protein_names_refseq": "phosphatidyl serine synthase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15110)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14993207;21554450;27862469", "class_list": "", "function": "Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) is replaced by L-serine., [UniProtKB, UniProtKB]; Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine. Is essential for phosphatidylserine (PS) biosynthesis and PE seems to be the most plausible substrate. Plays an important role in microspore maturation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9XI59", "ec_number_list": "2.7.8.8", "go_molecular_function": "GO:0003882 CDP-diacylglycerol-serine O-phosphatidyltransferase activity;GO:0106245 L-serine-phosphatidylethanolamine phosphatidyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0031965 nuclear membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006646 phosphatidylethanolamine biosynthetic process;GO:0006659 phosphatidylserine biosynthetic process;GO:0009556 microsporogenesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4HXY7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HXZ1-1", "uniprot_id": "BRO1_ARATH", "mass": 95209.0, "length": 846, "protein_name": "Vacuolar-sorting protein BRO1", "gene_name": "BRO1", "organism": "Arabidopsis", "refseq_name": "Endosomal targeting BRO1-like domain-containing protein", "refseq_ac": "NP_172965", "gene_names_uniprotkb": "BRO1; ALIX; F9L1.7; SPHR1", "gene_names_refseq": "F9L1.7; F9L1_7", "protein_names_uniprotkb": "Vacuolar-sorting protein BRO1; AtBRO1; BRO domain-containing protein 1", "protein_names_refseq": "Endosomal targeting BRO1-like domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15130)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;19245862;22639582;24924143;25561503;26324913;26342016;26902184;27862469", "class_list": "", "function": "Class E VPS protein involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles. Fusion between endosomes and the vacuole will then target the cargo proteins to the vacuolar lumen (Probable). Associates with FREE1 and ELC to perform function in the ESCRT-I complex. Binds ubiquitin in vitro (PubMed:26902184). Plays a role in the biogenesis of vacuole and multivesicular bodies (MVBs) (PubMed:26324913, PubMed:26342016). Required for the endosomal location of AMSH3 (PubMed:26324913). Mediates high-affinity phosphate transporter trafficking to maintain phosphate homeostasis. Regulates vacuolar degradation of PHT1-1 (PubMed:26342016)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8H1H8;Q9XI56", "ec_number_list": "", "go_molecular_function": "GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005829 cytosol;GO:0005770 late endosome;GO:0005771 multivesicular body", "go_biological_process": "GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway;GO:0007033 vacuole organization;GO:0036257 multivesicular body organization;GO:0099638 endosome to plasma membrane protein transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4HXZ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HY56-1", "uniprot_id": "RLT1_ARATH", "mass": 191990.0, "length": 1705, "protein_name": "Homeobox-DDT domain protein RLT1", "gene_name": "RLT1", "organism": "Arabidopsis", "refseq_name": "homeobox-1", "refseq_ac": "NP_174164", "gene_names_uniprotkb": "RLT1; HB-1", "gene_names_refseq": "F3M18.14; F3M18_14; HB-1; RINGLET 1; RLT1; homeobox-1", "protein_names_uniprotkb": "Homeobox-DDT domain protein RLT1; Protein HOMEOBOX-1; Protein RINGLET 1", "protein_names_refseq": "homeobox-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28420)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;21768351;22694359;23691993;25561503;26187819;27862469", "class_list": "", "function": "Transcriptional regulator required for the maintenance of the plant vegetative phase. In association with CHR11 or CHR17 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SGP0", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031010 ISWI-type complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0009908 flower development;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4HY56-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HYF3-1", "uniprot_id": "DCYD1_ARATH", "mass": 43900.0, "length": 401, "protein_name": "Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial", "gene_name": "DCD", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "DCD; ACD1; F11A17.2; T1N15.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial; 1-aminocyclopropane-1-carboxylic acid deaminase 1; 3.5.99.7; 4.4.1.15; AtACD1; AtD-CDes1; D-CDES; D-CDes1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48420)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15720402;19508369;21986537;22223895;27862469", "class_list": "", "function": "Catalyzes the production of hydrogen sulfide (H2S) from cysteine. Is mainly responsible for the degradation of cysteine to generate H2S, a regulator of stomatal movement and closure. Has high affinity for D-cysteine., [UniProtKB]; Possesses 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity. Acts as a regulator of ACC levels and causes changes in ethylene levels., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4C7;Q9SX74", "ec_number_list": "4.4.1.15;3.5.99.7", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0050897 cobalt ion binding;GO:0019148 D-cysteine desulfhydrase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:1990170 stress response to cadmium ion;GO:0009693 ethylene biosynthetic process;GO:0019447 D-cysteine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4HYF3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HZD1-1", "uniprot_id": "JMJ24_ARATH", "mass": 107230.0, "length": 944, "protein_name": "E3 ubiquitin-protein ligase JMJ24", "gene_name": "JMJ24", "organism": "Arabidopsis", "refseq_name": "JmjC domain protein JMJ24", "refseq_ac": "NP_001031007", "gene_names_uniprotkb": "JMJ24; F7G19.7", "gene_names_refseq": "F7G19.7; F7G19_7", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase JMJ24; 2.3.2.27; AtJMJ24; Inactive histone demethylase JMJ24; Jumonji domain-containing protein 24; Protein JUMONJI 24", "protein_names_refseq": "JmjC domain protein JMJ24", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09060)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;18713399;19423640;22060019;23776212;25561503;26119694;26798133;26979329;27862469;28011693;28400174;30833711", "class_list": "", "function": "Binds histone H3 but seems to have lost demethylase activity probably due to its inability to bind iron Fe(2+) (PubMed:26979329). Possesses E3 ubiquitin ligase activity and targets directly CMT3 for proteasomal degradation to initiate destabilization of the heterochromatic state (e.g. CHG cytosine methylation and H3K9me2) of endogenous silenced loci (PubMed:26798133, PubMed:26979329). Required for the removal of repressive H3K9me2 histone marks to facilitate the transcription of AtSN1, AtMu1c, solo LTR and SDC, thus counteracting their transcriptional silencing (PubMed:26119694, PubMed:26979329). Mainly required to promote the basal level transcription of silenced loci such as TE and repeats targeted by RNA-dependent DNA methylation (RdDM) for silencing, a specialized branch of the RNA interference (RNAi) pathway (PubMed:26119694, PubMed:26979329, PubMed:28400174). Also cooperates with RNAi pathways for gene silencing both by contributing to the production of 24-nt siRNA to initiate RdDM and by recruiting RDR2 to enable local transcripts to make dsRNA (PubMed:26119694, PubMed:28400174). Antagonizes histone H3K9 demethylase IBM1/JMJ25 function (PubMed:28400174)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFI4;B9DGQ5;C0SUU1;O04024;Q0WLZ4", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0061630 ubiquitin protein ligase activity;GO:0000976 transcription cis-regulatory region binding;GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0031011 Ino80 complex;GO:0000785 chromatin;GO:0048188 Set1C/COMPASS complex;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0010628 positive regulation of gene expression;GO:0090310 negative regulation of DNA methylation-dependent heterochromatin formation;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4HZD1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4HZG9-1", "uniprot_id": "ICP55_ARATH", "mass": 54982.0, "length": 493, "protein_name": "Intermediate cleaving peptidase 55, mitochondrial", "gene_name": "ICP55", "organism": "Arabidopsis", "refseq_name": "Metallopeptidase M24 family protein", "refseq_ac": "NP_001117254", "gene_names_uniprotkb": "ICP55; T31J12.2", "gene_names_refseq": "T31J12.2; T31J12_2", "protein_names_uniprotkb": "Intermediate cleaving peptidase 55, mitochondrial; 3.4.11.-; AtICP55; Protein INTERMEDIATE CLEAVAGE PEPTIDASE 55", "protein_names_refseq": "Metallopeptidase M24 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09300)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;22085399;22495024;25732537;25862457;27862469;28936218", "class_list": "", "function": "Aminopeptidase which cleaves preprotein intermediates that carry destabilizing N-ter amino acid residues after the mitochondrial processing peptidase (MPP) cleavage site and is thus critical for stabilization of the mitochondrial proteome., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HZH0;Q8GYQ0;Q9ZPZ5;W6HYK5", "ec_number_list": "", "go_molecular_function": "GO:0030145 manganese ion binding;GO:0004177 aminopeptidase activity;GO:0070006 metalloaminopeptidase activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006508 proteolysis;GO:0050821 protein stabilization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4HZG9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I065-1", "uniprot_id": "F4I065_ARATH", "mass": 98867.0, "length": 888, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "F27J15.13; F27J15_13", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F27J15.13; F27J15_13", "gene_names_refseq": "", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49100)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4I065-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I0K2-1", "uniprot_id": "SCKL2_ARATH", "mass": 68980.0, "length": 614, "protein_name": "Fructokinase-like 2, chloroplastic", "gene_name": "FLN2", "organism": "Arabidopsis", "refseq_name": "fructokinase-like protein", "refseq_ac": "NP_177080", "gene_names_uniprotkb": "FLN2; F23O10.21; F4N2.16; PAP13; PFKB1", "gene_names_refseq": "F4N2.16; F4N2_16; FLN2; fructokinase-like 2", "protein_names_uniprotkb": "Fructokinase-like 2, chloroplastic; AtFLN2; PEP-associated protein 13; Plastid-encoded RNA polymerase-associated protein 13; pfkB-type carbohydrate kinase family protein 1", "protein_names_refseq": "fructokinase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69200)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;16326926;19376835;20466843;20511297;22770232;23111157;23572148;23776212;23820729;24019900;25561503;27862469;30833711", "class_list": "", "function": "Required for proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C978;Q9LQA2", "ec_number_list": "", "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0000427 plastid-encoded plastid RNA polymerase complex;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0009658 chloroplast organization;GO:0042793 plastid transcription;GO:0009662 etioplast organization", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4I0K2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I1S7-1", "uniprot_id": "ELP2_ARATH", "mass": 92681.0, "length": 838, "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "organism": "Arabidopsis", "refseq_name": "elongator protein 2", "refseq_ac": "NP_175377", "gene_names_uniprotkb": "ELP2; AtELP2; Elongator subunit 2; F13F21.2; F14J22.24; GNS1; elongator protein 2", "gene_names_refseq": "AtELP2; ELP2; Elongator subunit 2; F14J22.24; elongator protein 2", "protein_names_uniprotkb": "Elongator complex protein 2; AtELP2; Elongator component 2; Protein GREEN NPR1 SEEDLING ON SA MEDIUM 1", "protein_names_refseq": "elongator protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49540)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;19500300;20080602;20807211;27862469;9349257", "class_list": "", "function": "Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (By similarity). The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity). Promotes organ development by modulating cell division rate. Prevents abscisic acid (ABA) signaling leading to stomatal closure and seedling growth inhibition. Involved in oxidative stress signaling. Prevents anthocyanin accumulation. Accelerator of defense gene induction required for rapid defense gene induction, and for the establishment of both basal and effector-triggered immunity (ETI), in a NPR1-independent manner, but is not required for systemic acquired resistance (SAR) establishment (PubMed:19500300, PubMed:20807211)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22044;Q0WVT2;Q9XIC1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0033588 elongator holoenzyme complex", "go_biological_process": "GO:0006952 defense response;GO:0006979 response to oxidative stress;GO:0008284 positive regulation of cell population proliferation;GO:0002098 tRNA wobble uridine modification;GO:0031349 positive regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4I1S7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I1T7-1", "uniprot_id": "NP214_ARATH", "mass": 192930.0, "length": 1819, "protein_name": "Nuclear pore complex protein NUP214", "gene_name": "NUP214", "organism": "Arabidopsis", "refseq_name": "Nuclear pore complex protein", "refseq_ac": "NP_001117499", "gene_names_uniprotkb": "NUP214; EMB1011; LNO1; T5A14.5", "gene_names_refseq": "LNO1; LONO 1; T5A14.22; embryo defective 1011", "protein_names_uniprotkb": "Nuclear pore complex protein NUP214; Nucleoporin 214; Protein EMBRYO DEFECTIVE 1011; Protein LNO1; Protein LONO1", "protein_names_refseq": "Nuclear pore complex protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55540)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;15266054;21189294;22898497;23776212;26187819;27862469;28154133", "class_list": "", "function": "Required for normal embryogenesis and seed viability. Involved in the first asymmetrical cell division of the zygote. Regulates the number and planes of cell divisions required for generating the normal embryo proper and suspensor, apical-basal axis, cotyledons and meristem., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 4, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 4, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 4, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "F4I1T6;Q94C88;Q9ZVV0", "ec_number_list": "", "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005634 nucleus;GO:0005643 nuclear pore;GO:0005739 mitochondrion", "go_biological_process": "GO:0015031 protein transport;GO:0010070 zygote asymmetric cell division;GO:0051028 mRNA transport;GO:0006405 RNA export from nucleus;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4I1T7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I2H7-1", "uniprot_id": "TPX2_ARATH", "mass": 90083.0, "length": 790, "protein_name": "Protein TPX2", "gene_name": "TPX2", "organism": "Arabidopsis", "refseq_name": "targeting protein for XKLP2", "refseq_ac": "NP_001184902", "gene_names_uniprotkb": "TPX2; F11M21.29", "gene_names_refseq": "AtTPX2; F21M11.31; F21M11_31; TPX2; targeting protein for XKLP2", "protein_names_uniprotkb": "Protein TPX2; AtTPX2; Targeting protein for XKLP2", "protein_names_refseq": "targeting protein for XKLP2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03780)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;18941054;22150830;24006426;27862469", "class_list": "", "function": "Regulates prospindle assembly during late prophase and at the onset of mitosis, before nuclear envelope breakdown (NEB). Is exported from the nucleus shortly before NEB and organized into two polar crescents. After NEB, is progressively associated with the forming spindle. Probably mediates AUR1 activation and localization to spindle microtubules. Has a microtubule binding capability and is able to trigger microtubule assembly induced by RanGTP in a heterologous system. Not involved in phragmoplast assembly, nuclear envelope reformation, and cortical microtubule assembly at the onset of G1 (PubMed:18941054). Involved in the formation of specific nuclear and perinuclear microtubular arrays in the nuclei of acentrosomal plant cells. Fungi and plants have acentrosomal microtubule arrays because they lack centrosomes. They use other microtubule organizing center (MTOC) structures to organize their microtubules. May function through interaction with importin (PubMed:24006426)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I2H9;Q3EDJ2;Q56XS5;Q9ZWA0", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding;GO:0043539 protein serine/threonine kinase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005819 spindle;GO:0005874 microtubule;GO:0005880 nuclear microtubule", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0051301 cell division;GO:0090307 mitotic spindle assembly;GO:0060236 regulation of mitotic spindle organization;GO:0051225 spindle assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4I2H7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I2J8-1", "uniprot_id": "CATIN_ARATH", "mass": 83434.0, "length": 716, "protein_name": "Splicing factor Cactin", "gene_name": "CTN", "organism": "Arabidopsis", "refseq_name": "cactus-binding carboxy-terminal, cactin", "refseq_ac": "NP_001184904", "gene_names_uniprotkb": "CTN; F21M11.16", "gene_names_refseq": "CACTIN; CTN; F21M11.16; F21M11_16", "protein_names_uniprotkb": "Splicing factor Cactin", "protein_names_refseq": "cactus-binding carboxy-terminal, cactin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03910)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130712;18463617;19245862;19376835;21768351;22631563;23111157;23172892;23328941;23454656;23572148;23660473;23776212;24924143;25561503;26091701;27419465;27862469;28011693;30833711", "class_list": "", "function": "Plays a role in pre-mRNA splicing by facilitating excision of a subset of introns (By similarity). Required for embryogenesis (PubMed:23454656)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZWB1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0045292 mRNA cis splicing, via spliceosome;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "F4I2J8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I2N7-1", "uniprot_id": "RLK7_ARATH", "mass": 107450.0, "length": 977, "protein_name": "Receptor-like protein kinase 7", "gene_name": "RLK7", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": "NP_172468", "gene_names_uniprotkb": "RLK7; F21M12.36", "gene_names_refseq": "F21M12.36; F21M12_36; LRR XI-23; RLK7; receptor-like kinase 7", "protein_names_uniprotkb": "Receptor-like protein kinase 7; 2.7.11.1", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09970)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;20064227;20811905;25188390;27862469", "class_list": "", "function": "Plays a role in pattern-triggered immunity (PTI) signaling induced by pathogen-associated molecular patterns (PAMPs). Acts as a receptor for PIP1 defense peptide. PIP1 is an endogenous secreted peptide that acts as elicitor of immune response and positive regulator of defense response (PubMed:25188390). Involved in the control of seed germination speed, in tolerance to oxidative stress and in maintaining seed longevity (PubMed:20811905)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 12, "predicted_n_glycosites": 12, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 12, "binding_glycan_count": 0, "secondary_ac_list": "O04517;Q56X19;Q8W4B5;Q941F6", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0042277 peptide binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0045087 innate immune response;GO:0046777 protein autophosphorylation;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4I2N7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I316-1", "uniprot_id": "SUN3_ARATH", "mass": 74184.0, "length": 660, "protein_name": "SUN domain-containing protein 3", "gene_name": "SUN3", "organism": "Arabidopsis", "refseq_name": "Galactose-binding protein", "refseq_ac": "NP_683323", "gene_names_uniprotkb": "SUN3; F19G10.15", "gene_names_refseq": "AtSUN3; SUN-domain protein 3; SUN3", "protein_names_uniprotkb": "SUN domain-containing protein 3; AtSUN3", "protein_names_refseq": "Galactose-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22882)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11910074;14593172;25217773;25740919;27862469", "class_list": "", "function": "Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. [TAIR]., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23133;Q8GX04;Q8H7G6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane", "go_biological_process": "GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4I316-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I3P9-1", "uniprot_id": "MURE_ARATH", "mass": 85587.0, "length": 772, "protein_name": "UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic", "gene_name": "MURE", "organism": "Arabidopsis", "refseq_name": "ALBINO OR PALE-GREEN 13", "refseq_ac": "NP_001321888", "gene_names_uniprotkb": "MURE; APG13; F24D7.13; PDE316", "gene_names_refseq": "ALBINO OR PALE-GREEN 13; APG13; ATMURE; F24D7.13; F24D7_13; MURE; PDE316; PIGMENT DEFECTIVE EMBRYO 316", "protein_names_uniprotkb": "UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic; AtMurE; Protein ALBINO OR PALE-GREEN 13; Protein PIGMENT DEFECTIVE EMBRYO 316", "protein_names_refseq": "ALBINO OR PALE-GREEN 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63680)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;16326926;18036201;19376835;20466843;23111157;23572148;23660473;23776212;26091701;27862469;30833711", "class_list": "", "function": "Involved in chloroplast biogenesis. Required for thylakoid membrane development. Seems to be required for plastid-encoded plastid RNA polymerase (PEP)-dependent gene expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAD3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016874 ligase activity;GO:0016881 acid-amino acid ligase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051301 cell division;GO:0008360 regulation of cell shape;GO:0009658 chloroplast organization;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4I3P9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I4F2-1", "uniprot_id": "RHS3_ARATH", "mass": 56130.0, "length": 499, "protein_name": "Serine/threonine-protein kinase RHS3", "gene_name": "RHS3", "organism": "Arabidopsis", "refseq_name": "root hair specific 3", "refseq_ac": "NP_173094", "gene_names_uniprotkb": "RHS3; AGC1-6; F3O9.24", "gene_names_refseq": "F3O9.24; F3O9_24; RHS4; ROOT HAIR SPECIFIC 4; RSH3; root hair specific 3", "protein_names_uniprotkb": "Serine/threonine-protein kinase RHS3; 2.7.11.1; AGC serine/threonine-protein kinase subfamily 1 member 6; Protein ROOT HAIR SPECIFIC 3", "protein_names_refseq": "root hair specific 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16440)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130712;13678909;16973627;17147637;18686298;19448035;23111157;23172892;23328941;23572148;23776212;24043427;24601666;26091701;27862469;29167316;30833711", "class_list": "", "function": "Involved in root hair growth and morphogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0ME72;Q1PFV6;Q9SA43", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0080147 root hair cell development", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "F4I4F2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I562-1", "uniprot_id": "AP3M_ARATH", "mass": 46313.0, "length": 415, "protein_name": "AP-3 complex subunit mu", "gene_name": "AP3M", "organism": "Arabidopsis", "refseq_name": "Clathrin adaptor complexes medium subunit family protein", "refseq_ac": "NP_176052", "gene_names_uniprotkb": "AP3M; F25P12.96; ZIP4", "gene_names_refseq": "AP3M; F25P12.96; F25P12_96; ZIG SUPPRESSOR 4; ZIP4; adaptor protein-3 mu-adaptin", "protein_names_uniprotkb": "AP-3 complex subunit mu; Adaptor protein complex AP-3 subunit mu; Adaptor protein-3 mu-adaptin; Adaptor-related protein complex 3 subunit mu; At-muD-Ad; Mu3-adaptin; Protein ZIG SUPPRESSOR 4", "protein_names_refseq": "Clathrin adaptor complexes medium subunit family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56590)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11598180;14871308;14993207;19884248;21670741;22253225;27862469", "class_list": "", "function": "Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also functions in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FXB1", "ec_number_list": "", "go_molecular_function": "GO:0035615 clathrin adaptor activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005802 trans-Golgi network;GO:0030121 AP-1 adaptor complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006897 endocytosis;GO:0006896 Golgi to vacuole transport;GO:0009630 gravitropism", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I562-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I5N6-1", "uniprot_id": "RIC3_ARATH", "mass": 24256.0, "length": 220, "protein_name": "CRIB domain-containing protein RIC3", "gene_name": "RIC3", "organism": "Arabidopsis", "refseq_name": "ROP-interactive CRIB motif-containing protein 3", "refseq_ac": "NP_171940", "gene_names_uniprotkb": "RIC3; F19P19.8", "gene_names_refseq": "F19P19.8; F19P19_8; RIC3; ROP-interactive CRIB motif-containing protein 3", "protein_names_uniprotkb": "CRIB domain-containing protein RIC3; ROP-interactive CRIB motif-containing protein 3; Target of ROP protein RIC3", "protein_names_refseq": "ROP-interactive CRIB motif-containing protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04450)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11752391;15824136;18591430;19376835;22631563;27862469", "class_list": "", "function": "Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Functions as a downstream effector of ARAC11/ROP1 to activate calcium signaling that leads to F-actin disassembly associated with exocytosis in the tip of the growing pollen tube. Counteracts the ARAC11/ROP1-RIC4 pathway, which promotes apical F-actin assembly associated with vesicle accumulation, to control actin dynamics and pollen tube apical growth., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P93814", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0030834 regulation of actin filament depolymerization;GO:0050850 positive regulation of calcium-mediated signaling;GO:0051650 establishment of vesicle localization;GO:0050848 regulation of calcium-mediated signaling", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4I5N6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I6G4-1", "uniprot_id": "JMJ18_ARATH", "mass": 92809.0, "length": 819, "protein_name": "Lysine-specific demethylase JMJ18", "gene_name": "JMJ18", "organism": "Arabidopsis", "refseq_name": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "refseq_ac": "NP_001185118", "gene_names_uniprotkb": "JMJ18; T17H7.10", "gene_names_refseq": "JMJ18; Jumonji domain-containing protein 18; T17H7.10; T17H7_10", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ18; 1.14.11.-; AtJMJ18; Jumonji domain-containing protein 18; Lysine-specific histone demethylase JMJ18; Protein JUMONJI 18; [histone H3]-trimethyl-L-lysine(4) monodemethylase JMJ18", "protein_names_refseq": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;18463617;18713399;20466843;22536163;23111157;23572148;25561503;27862469", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a specific activity for H3K4me3 and H3K4me2. No activity on H3K9me3/2, H3K27me3/2 and H3K36me3/2. Involved in the control of flowering time by demethylating H3K4me3 at the FLC locus and repressing its expression. The repression of FLC level and reduction in H3K4me3 at the FLC locus results in induction of the flowering activator FT, which is a downstream target of FLC., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4M0;Q9SY24", "ec_number_list": "1.14.11.-;1.14.11.67", "go_molecular_function": "GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity;GO:0032453 histone H3K4 demethylase activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0048573 photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4I6G4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I718-1", "uniprot_id": "CSI3_ARATH", "mass": 231432.0, "length": 2136, "protein_name": "Protein CELLULOSE SYNTHASE INTERACTIVE 3", "gene_name": "CSI3", "organism": "Arabidopsis", "refseq_name": "CELLULOSE SYNTHASE INTERACTIVE 3", "refseq_ac": "NP_001185419", "gene_names_uniprotkb": "CSI3; T5M16.5", "gene_names_refseq": "CELLULOSE SYNTHASE INTERACTIVE 3; CSI3; T5M16.5; T5M16_5", "protein_names_uniprotkb": "Protein CELLULOSE SYNTHASE INTERACTIVE 3", "protein_names_refseq": "CELLULOSE SYNTHASE INTERACTIVE 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77460)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;20616083;22060019;24368796;25262237;27862469;28011693", "class_list": "", "function": "Regulator of the microtubular cytoskeleton (By similarity). Microtubule-associated protein involved in the association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules. Promotes dynamics of CSCs in the plasma membrane in both microtubules-dependent and microtubules-independent manners. Regulates primary cell wall biosynthesis and cellulose microfibrils organization (PubMed:24368796)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXS1;Q9CAQ9", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0010330 cellulose synthase complex", "go_biological_process": "GO:0008360 regulation of cell shape;GO:0009826 unidimensional cell growth;GO:0051211 anisotropic cell growth;GO:0052324 plant-type cell wall cellulose biosynthetic process;GO:2001006 regulation of cellulose biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I718-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I735-1", "uniprot_id": "PDS5B_ARATH", "mass": 159169.0, "length": 1410, "protein_name": "Sister chromatid cohesion protein PDS5 homolog B", "gene_name": "PDS5B", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": "NP_001185420", "gene_names_uniprotkb": "PDS5B; T5M16.19; T5M16_19", "gene_names_refseq": "T5M16.19; T5M16_19", "protein_names_uniprotkb": "Sister chromatid cohesion protein PDS5 homolog B; AtPDS5B; Precocious dissociation of sisters protein 5-B", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77600)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;24946828;26648949;27862469", "class_list": "", "function": "Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949). Required for proximal-distal cell cycle-driven leaf growth in both lamina and petiole (PubMed:24946828)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAP7", "ec_number_list": "", "go_molecular_function": "GO:0140670 cohesin unloader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0009954 proximal/distal pattern formation;GO:0007064 mitotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4I735-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I7C7-1", "uniprot_id": "WAPL1_ARATH", "mass": 103633.0, "length": 930, "protein_name": "Wings apart-like protein 1", "gene_name": "WAPL1", "organism": "Arabidopsis", "refseq_name": "WAPL (Wings apart-like protein regulation of heterochromatin) protein", "refseq_ac": "NP_172573", "gene_names_uniprotkb": "WAPL1; T19D16.5", "gene_names_refseq": "AtWAPL1; T19D16.5; T19D16_5; WAPL1; Wings apart-like protein 1", "protein_names_uniprotkb": "Wings apart-like protein 1; AtWAPL1", "protein_names_refseq": "WAPL (Wings apart-like protein regulation of heterochromatin) protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11060)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;22060019;23028719;23111157;25033056;25561503;26813623;27862469", "class_list": "", "function": "Regulator of sister chromatid cohesion in meiosis which negatively regulates cohesin association with chromatin, acting as an antagonist of CTF7 (PubMed:25033056, PubMed:26813623). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (By similarity). Essential for the prophase removal of cohesin during meiosis thus determining the timely release of meiotic cohesion (PubMed:25033056). Important for proper spindle attachment and assembly during meiosis (PubMed:25033056). Helps to prevent abnormal centromere association during prophase I in meiocytes (PubMed:25033056). Required for early embryonic patterning (PubMed:25033056). Also involved in chromosome segregation during mitosis (PubMed:25033056)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04085", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005694 chromosome", "go_biological_process": "GO:0010789 meiotic sister chromatid cohesion involved in meiosis I;GO:0006281 DNA repair;GO:0051301 cell division;GO:0045132 meiotic chromosome segregation;GO:0000070 mitotic sister chromatid segregation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I7C7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I7I0-1", "uniprot_id": "ALAT1_ARATH", "mass": 59821.0, "length": 543, "protein_name": "Alanine aminotransferase 1, mitochondrial", "gene_name": "ALAAT1", "organism": "Arabidopsis", "refseq_name": "alanine aminotransferas", "refseq_ac": "NP_173173", "gene_names_uniprotkb": "ALAAT1; AOAT4; T13M22.3", "gene_names_refseq": "ALANINE AMINOTRANSFERAS; AlaAT1; T13M22.3; T13M22_3; alanine aminotransferas", "protein_names_uniprotkb": "Alanine aminotransferase 1, mitochondrial; 2.6.1.-; 2.6.1.2; Alanine-2-oxoglutarate aminotransferase 4; AtAlaAT1; AtAlaATc", "protein_names_refseq": "alanine aminotransferas", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17290)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12631323;14593172;14671022;17319845;22223895;27862469;29654922", "class_list": "", "function": "Is the major alanine aminotransferase in roots that catalyzes the conversion of alanine to pyruvate (PubMed:17319845). Involved in the rapid conversion of alanine to pyruvate during recovery from low-oxygen stress (PubMed:17319845)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56Z96;Q94BP8;Q9LKJ4;Q9LN15", "ec_number_list": "2.6.1.-;2.6.1.2;2.6.1.44;2.6.1.4", "go_molecular_function": "GO:0005524 ATP binding;GO:0030170 pyridoxal phosphate binding;GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0001666 response to hypoxia;GO:0071456 cellular response to hypoxia;GO:0046686 response to cadmium ion;GO:0019481 L-alanine catabolic process, by transamination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4I7I0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I902-1", "uniprot_id": "CHS1_ARATH", "mass": 47577.0, "length": 420, "protein_name": "Disease resistance protein CHS1", "gene_name": "CHS1", "organism": "Arabidopsis", "refseq_name": "Disease resistance protein (TIR-NBS class)", "refseq_ac": "NP_001319029", "gene_names_uniprotkb": "CHS1; F1L3.31", "gene_names_refseq": "CHILLING SENSITIVE 1; CHS1; F11A6.20; F11A6_20", "protein_names_uniprotkb": "Disease resistance protein CHS1; 3.2.2.6; Protein CHILLING SENSITIVE 1", "protein_names_refseq": "Disease resistance protein (TIR-NBS class)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17610)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10811971;11130712;12366802;16667557;23617639;23651299;27862469", "class_list": "", "function": "Confers resistance to low temperatures by limiting chloroplast damage and cell death, thus maintaining growth homeostasis (PubMed:16667557, PubMed:23617639, PubMed:23651299). Regulates steryl-esters and sterols accumulation (PubMed:16667557). Limits leaf necrosis associated with virulent bacterial infection (e.g. Pseudomonas syringae pv. tomato DC3000) (PubMed:23617639)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNP4", "ec_number_list": "3.2.2.6;3.2.2.-", "go_molecular_function": "GO:0043531 ADP binding;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0046713 borate transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4I902-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I9A2-1", "uniprot_id": "TNO1_ARATH", "mass": 197632.0, "length": 1767, "protein_name": "Trans-Golgi network-localized SYP41-interacting protein 1", "gene_name": "TNO1", "organism": "Arabidopsis", "refseq_name": "TGN-related, localized SYP41 interacting protein", "refseq_ac": "NP_001185085", "gene_names_uniprotkb": "TNO1; F21J9.12", "gene_names_refseq": "F21J9.12; TGN-localized SYP41 interacting protein; TNO1", "protein_names_uniprotkb": "Trans-Golgi network-localized SYP41-interacting protein 1; TGN-localized SYP41-interacting protein 1", "protein_names_refseq": "TGN-related, localized SYP41 interacting protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G24460)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;11910074;18463617;19376835;20466843;21521696;21768351;23111157;23572148;23660473;23776212;25561503;26091701;26187819;27862469;28399805;29654922;30833711", "class_list": "", "function": "Tethering factor involved in vesicle fusion at the trans-Golgi network (TGN) thus being required for efficient protein trafficking to the vacuole (PubMed:21521696). Implicated in resistance to salt and osmotic stresses (PubMed:21521696). Modulates the cell morphology (e.g. epidermal cell file rotation (CFR) and cell expansion) in mature regions of roots and the base of hypocotyls as well as root skewing, a process leading to root movement within the soil in order to maximize anchorage and nutrient acquisition, probably by regulating microtubule stabilization independently of their orientation (PubMed:28399805)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1BCU1;Q8GXQ6;Q9FYL7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0032588 trans-Golgi network membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0007034 vacuolar transport;GO:0006886 intracellular protein transport;GO:0010226 response to lithium ion;GO:0009651 response to salt stress;GO:0022604 regulation of cell morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "F4I9A2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I9G2-1", "uniprot_id": "ESV1_ARATH", "mass": 48975.0, "length": 426, "protein_name": "Protein EARLY STARVATION 1, chloroplastic", "gene_name": "ESV1", "organism": "Arabidopsis", "refseq_name": "inactive purple acid phosphatase-like protein", "refseq_ac": "NP_174971", "gene_names_uniprotkb": "ESV1; F7F22.5; F7F22_5; RGV1", "gene_names_refseq": "F7F22.5; F7F22_5", "protein_names_uniprotkb": "Protein EARLY STARVATION 1, chloroplastic; AtESV1; Protein REDUCED GRAVITROPIC 1", "protein_names_refseq": "inactive purple acid phosphatase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G42430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;27207856;27862469;29681129;34367195;35665549", "class_list": "", "function": "Binds preferentially to highly ordered alpha-glucans, such as starch and crystalline maltodextrins (PubMed:29681129, PubMed:35665549). Involved in the organization of the starch granule matrix, thus influencing starch turnover by modulating the accessibility of starch polymers to modifying and degrading enzymes involved in phosphorylation, hydrolyzes and synthesis, including starch synthases (SSI and SSIII), starch phosphorylases (PHS1), isoamylase, beta-amylase, glucan water dikinase (GWD) and phosphoglucan water dikinase (PWD) (PubMed:27207856, PubMed:29681129, PubMed:35665549). Prevents GWD- and PWD-mediated starch phosphorylation, and subsequent degradation (PubMed:29681129). Required for the control of starch degradation in leaves and starch distribution in nonphotosynthetic parts (e.g. cells immediately adjacent to veins, columella cells of root caps, stems, flowers and siliques) by limiting the hasty depletion of starch reserves during the night (PubMed:27207856, PubMed:34367195). Promotes gravitropic responses, negative in shoots but positive in roots, by maintaining starch granules (statoliths) accumulation in hypocotyls and roots columella, especially in dark conditions and in the endodermis, where starch is formed from transported glucose-6-phosphates (PubMed:34367195)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHN5", "ec_number_list": "", "go_molecular_function": "GO:2001070 starch binding", "go_cellular_component": "GO:0009570 chloroplast stroma;GO:0043036 starch grain", "go_biological_process": "GO:0005982 starch metabolic process;GO:0009958 positive gravitropism;GO:0009959 negative gravitropism;GO:0032948 regulation of alpha-glucan metabolic process;GO:2000904 regulation of starch metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4I9G2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I9J7-1", "uniprot_id": "Y14_ARATH", "mass": 22438.0, "length": 202, "protein_name": "RNA-binding protein Y14", "gene_name": "Y14", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "refseq_ac": "NP_564591", "gene_names_uniprotkb": "Y14; F5D21.5; RBM8", "gene_names_refseq": "F5D21.5; F5D21_5; Y14", "protein_names_uniprotkb": "RNA-binding protein Y14; AtY14; RNA-binding protein 8A", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51510)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;14593172;16953428;19376835;19435936;21676911;23111157;24416299;25561503;26867216;27862469;29654922;30833711", "class_list": "", "function": "Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). Can increase in vitro the expression from reporter constructs that contain leader introns required for the expression of different genes. In association with MAGO and PYM, participates in intron-mediated enhancement of gene expression (PubMed:21676911). The MAGO-Y14 heterodimer works synergistically with the NMD pathway to regulate male gametophyte development (PubMed:26867216)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LG23;Q94AZ6;Q9C8K3", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006397 mRNA processing;GO:0006417 regulation of translation;GO:0010628 positive regulation of gene expression;GO:0008380 RNA splicing;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4I9J7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4I9R1-1", "uniprot_id": "F4I9R1_ARATH", "mass": 42101.0, "length": 374, "protein_name": "Basic-leucine zipper (BZIP) transcription factor family protein", "gene_name": "T15M6.12", "organism": "Arabidopsis", "refseq_name": "Basic-leucine zipper (bZIP) transcription factor family protein", "refseq_ac": "NP_176108", "gene_names_uniprotkb": "T15M6.12", "gene_names_refseq": "T15M6.12", "protein_names_uniprotkb": "Basic-leucine zipper (BZIP) transcription factor family protein", "protein_names_refseq": "Basic-leucine zipper (bZIP) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G58110)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;18463617;23111157;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4I9R1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IAG2-1", "uniprot_id": "SSY3_ARATH", "mass": 118512.0, "length": 1042, "protein_name": "Starch synthase 3, chloroplastic/amyloplastic", "gene_name": "SS3", "organism": "Arabidopsis", "refseq_name": "starch synthase 3", "refseq_ac": "NP_172637", "gene_names_uniprotkb": "SS3; ATSS3; F25C20.13; F25C20_13; STARCH SYNTHASE III; starch synthase 3", "gene_names_refseq": "ATSS3; F25C20.13; F25C20_13; SS3; STARCH SYNTHASE III; starch synthase 3", "protein_names_uniprotkb": "Starch synthase 3, chloroplastic/amyloplastic; 2.4.1.21; AtSS3; Soluble starch synthase III", "protein_names_refseq": "starch synthase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11720)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;15908598;17217470;18260645;18811962;19666739;22060019;25561503;27862469", "class_list": "", "function": "Involved in the synthesis of glycan chains within amylopectin in leaves. May play a regulatory role in the control of starch accumulation in plastids., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1WAB7;Q306T0;Q9SAA5", "ec_number_list": "2.4.1.21", "go_molecular_function": "GO:0042802 identical protein binding;GO:0004373 alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity;GO:2001070 starch binding;GO:0009011 alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity", "go_cellular_component": "GO:0009501 amyloplast;GO:0009507 chloroplast", "go_biological_process": "GO:0010021 amylopectin biosynthetic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IAG2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IAX0-1", "uniprot_id": "CAOA2_ARATH", "mass": 76674.0, "length": 677, "protein_name": "Amine oxidase [copper-containing] alpha 2, peroxisomal", "gene_name": "CuAOalpha2", "organism": "Arabidopsis", "refseq_name": "Copper amine oxidase family protein", "refseq_ac": "NP_174450", "gene_names_uniprotkb": "CuAOalpha2; CuAO8; F27M3.11; F27M3.12", "gene_names_refseq": "F27M3.11; F27M3_11", "protein_names_uniprotkb": "Amine oxidase [copper-containing] alpha 2, peroxisomal; 1.4.3.21; AtCuAO8; AtCuAOalpha2", "protein_names_refseq": "Copper amine oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31690)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;27862469;28383668;31862580", "class_list": "", "function": "Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:28383668). Involved in putrescine catabolism in peroxisomes in response to salt stress (PubMed:28383668). Regulates arginine-dependent nitric oxide (NO) production, a key signaling molecule regulating a wide range of physiological processes including responses to salt stress, by influencing arginine bioavailability (PubMed:28383668). Modulates primary root growth (PubMed:28383668)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6V8;Q9C6V9", "ec_number_list": "1.4.3.21", "go_molecular_function": "GO:0005507 copper ion binding;GO:0008131 primary methylamine oxidase activity;GO:0048038 quinone binding;GO:0052595 aliphatic amine oxidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0009507 chloroplast", "go_biological_process": "GO:0009611 response to wounding;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009308 amine metabolic process;GO:0006809 nitric oxide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IAX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IAX1-1", "uniprot_id": "CAOA3_ARATH", "mass": 76711.0, "length": 681, "protein_name": "Amine oxidase [copper-containing] alpha 3, peroxisomal", "gene_name": "CuAOalpha3", "organism": "Arabidopsis", "refseq_name": "Copper amine oxidase family protein", "refseq_ac": "NP_174452", "gene_names_uniprotkb": "CuAOalpha3; CuAO2; F27M3.10; F27M3.9", "gene_names_refseq": "F27M3.9; F27M3_9", "protein_names_uniprotkb": "Amine oxidase [copper-containing] alpha 3, peroxisomal; 1.4.3.21; AtCuAO2; AtCuAOalpha3; Copper amine oxidase 2", "protein_names_refseq": "Copper amine oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31710)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11910074;23915037;27862469;31862580", "class_list": "", "function": "Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037). Involved in putrescine catabolism in peroxisomes (PubMed:23915037)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GZ62;Q9C6W0;Q9C6W1", "ec_number_list": "1.4.3.21", "go_molecular_function": "GO:0005507 copper ion binding;GO:0008131 primary methylamine oxidase activity;GO:0048038 quinone binding;GO:0052595 aliphatic amine oxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005777 peroxisome", "go_biological_process": "GO:0009611 response to wounding;GO:0009414 response to water deprivation;GO:0009308 amine metabolic process;GO:0009447 putrescine catabolic process;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4IAX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IB81-1", "uniprot_id": "LYK3_ARATH", "mass": 71445.0, "length": 651, "protein_name": "LysM domain receptor-like kinase 3", "gene_name": "LYK3", "organism": "Arabidopsis", "refseq_name": "protein kinase family protein / peptidoglycan-binding LysM domain-containing protein", "refseq_ac": "NP_175606", "gene_names_uniprotkb": "LYK3; T14L22.13", "gene_names_refseq": "AtLYK3; LYK3; LysM-containing receptor-like kinase 3; T14L22.13; T14L22_13", "protein_names_uniprotkb": "LysM domain receptor-like kinase 3; 2.7.11.-; LysM-containing receptor-like kinase 3", "protein_names_refseq": "protein kinase family protein / peptidoglycan-binding LysM domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51940)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14993207;25561503;27862469", "class_list": "", "function": "Putative Lysin motif (LysM) receptor kinase that may recognize microbe-derived N-acetylglucosamine (NAG)-containing ligands., [UniProtKB]", "predicted_glycosites": 11, "predicted_n_glycosites": 10, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZA7", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0019199 transmembrane receptor protein kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006952 defense response;GO:0045087 innate immune response;GO:0050832 defense response to fungus;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IB81-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ICF4-1", "uniprot_id": "RBL10_ARATH", "mass": 38222.0, "length": 343, "protein_name": "RHOMBOID-like protein 10, chloroplastic", "gene_name": "RBL10", "organism": "Arabidopsis", "refseq_name": "RHOMBOID-like protein 10", "refseq_ac": "NP_001185093", "gene_names_uniprotkb": "RBL10; F4F7.32; RBL8", "gene_names_refseq": "ATRBL10; ATRBL7; AtRBL8; F4F7.32; F4F7_32; RBL10; RBL8; RHOMBOID-like protein 10; RHOMBOID-like protein 7; RHOMBOID-like protein 8", "protein_names_uniprotkb": "RHOMBOID-like protein 10, chloroplastic; 3.4.21.-; AtRBL10", "protein_names_refseq": "RHOMBOID-like protein 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G25290)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;16895613;17181860;17938163;22007993;22416142;22738221;27862469", "class_list": "", "function": "Rhomboid-type serine protease that catalyzes intramembrane proteolysis (PubMed:22416142, PubMed:22738221). Required for correct root growth, floral development, fertility and photoprotection (PubMed:22416142). May be involved in TIC22 processing during its import and in AOS accumulation in the chloroplast membrane (PubMed:22738221)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4ICF5;Q9FRH8", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0046473 phosphatidic acid metabolic process;GO:0006508 proteolysis;GO:0006654 phosphatidic acid biosynthetic process;GO:0019374 galactolipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4ICF4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ICK8-1", "uniprot_id": "IWS1_ARATH", "mass": 57425.0, "length": 502, "protein_name": "Protein IWS1 homolog 1", "gene_name": "IWS1", "organism": "Arabidopsis", "refseq_name": "Transcription elongation factor (TFIIS) family protein", "refseq_ac": "NP_174492", "gene_names_uniprotkb": "IWS1; ATIWS1; F3C3.8; F3C3_8; HIGH NITROGEN INSENSITIVE 9; HIN9; HNI9; SEB1", "gene_names_refseq": "ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6); ATIWS1; F3C3.8; F3C3_8; HIGH NITROGEN INSENSITIVE 9; HNI9; IWS1", "protein_names_uniprotkb": "Protein IWS1 homolog 1; AtIWS1; Interacts with SPT6 protein 1; Protein HIGH NITROGEN INSENSITIVE 9; Protein SUPPRESSOR OF BES-1-D 1", "protein_names_refseq": "Transcription elongation factor (TFIIS) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32130)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;18463617;19245862;19376835;20139304;20466843;21788519;22440515;23111157;23572148;23660473;23776212;24601666;24838002;25561503;27862469;29167316;30833711", "class_list": "", "function": "Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation. Involved in transcription elongation. May function at post-recruitment and elongation steps of transcription. May be recruited by BZR2/BES1 to target genes and promote their expression during transcription elongation process. Required for brassinosteroid (BR)-induced gene expression (PubMed:20139304). Required the for regulation of numerous nitrogen-responsive genes in roots. Acts in roots to repress NRT2.1 transcription in response to high nitrogen supply. This repression is associated with an IWS1-dependent increase of trimethylation on 'Lys-27' H3K27me3 at the NRT2.1 locus (PubMed:21788519)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FVQ8", "ec_number_list": "", "go_molecular_function": "GO:0003746 translation elongation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0023052 signaling;GO:0032784 regulation of DNA-templated transcription elongation;GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "F4ICK8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ICX9-1", "uniprot_id": "TSA1_ARATH", "mass": 84376.0, "length": 759, "protein_name": "TSK-associating protein 1", "gene_name": "TSA1", "organism": "Arabidopsis", "refseq_name": "TSK-associating protein 1", "refseq_ac": "NP_564607", "gene_names_uniprotkb": "TSA1; F19K6.14", "gene_names_refseq": "AtTSA1; F19K6.14; F19K6_14; TSA1; TSK-associating protein 1", "protein_names_uniprotkb": "TSK-associating protein 1", "protein_names_refseq": "TSK-associating protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G52410)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;15964904;17951448;18780803;22102697;22133685;24348487;27862469", "class_list": "", "function": "Involved in seedling development in the dark. May be involved, when interacting with TSK, in the organization of spindle microtubules and may participate, when interacting with GIP1, in structural links between the nuclear envelope and the cytoskeleton., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4ICY0;Q94AE1;Q9C831", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005777 peroxisome;GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0050832 defense response to fungus;GO:0009640 photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4ICX9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDB2-1", "uniprot_id": "PHL_ARATH", "mass": 143310.0, "length": 1325, "protein_name": "Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING", "gene_name": "PHL", "organism": "Arabidopsis", "refseq_name": "nuclear receptor coactivator", "refseq_ac": "NP_001321648", "gene_names_uniprotkb": "PHL; T10D10.14; T10D10.15", "gene_names_refseq": "PHL; PHYTOCHROME-DEPENDENT LATE-FLOWERING; T10D10.14; T10D10_14", "protein_names_uniprotkb": "Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING", "protein_names_refseq": "nuclear receptor coactivator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72390)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;18463617;19376835;20466843;21768351;23111157;23328941;23572148;23776212;24127609;24614229;25561503;26091701;27532006;27862469;28011693;28154133;30833711", "class_list": "", "function": "Triggers photoperiod-monitored flowering by repressing PHYB-dependent flowering negative regulation, probably through physical interactions with PHYB and CO., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 4, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 4, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 4, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 12, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9D6;Q9C9D7", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016604 nuclear body;GO:0000124 SAGA complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0007623 circadian rhythm;GO:0009416 response to light stimulus;GO:0009908 flower development;GO:0048510 regulation of timing of transition from vegetative to reproductive phase", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "F4IDB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDC2-1", "uniprot_id": "SWA2_ARATH", "mass": 117024.0, "length": 1043, "protein_name": "Protein SLOW WALKER 2", "gene_name": "SWA2", "organism": "Arabidopsis", "refseq_name": "CCAAT-binding factor", "refseq_ac": "NP_177388", "gene_names_uniprotkb": "SWA2; EDA25; T10D10.9", "gene_names_refseq": "EDA25; SLOW WALKER2; SWA2; T10D10.9; T10D10_9; embryo sac development arrest 25", "protein_names_uniprotkb": "Protein SLOW WALKER 2; Protein EMBRYO SAC DEVELOPMENT ARREST 25", "protein_names_refseq": "CCAAT-binding factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72440)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;15634699;18463617;19734265;20466843;23660473;23776212;27862469;30338215;30833711", "class_list": "", "function": "Together with NOC2, probably involved in pre-ribosome export from the nucleus to the cytoplasm (PubMed:19734265). Required for coordinated cell cycle progression during female gametophyte and pollen development (PubMed:15634699, PubMed:19734265)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3TIK7;Q9C9E2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0051302 regulation of cell division;GO:0009553 embryo sac development;GO:0009555 pollen development;GO:0010197 polar nucleus fusion", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F4IDC2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDS7-1", "uniprot_id": "VPS18_ARATH", "mass": 112320.0, "length": 988, "protein_name": "Vacuolar sorting protein 18", "gene_name": "VPS18", "organism": "Arabidopsis", "refseq_name": "zinc ion binding protein", "refseq_ac": "NP_172709", "gene_names_uniprotkb": "VPS18; F5O11.22; T12C24.2", "gene_names_refseq": "F5O11.22; F5O11_22", "protein_names_uniprotkb": "Vacuolar sorting protein 18", "protein_names_refseq": "zinc ion binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12470)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12589039;27862469;28011693;29463724", "class_list": "", "function": "Essential protein required during embryogenesis. Believed to act as a core component of the putative HOPS endosomal tethering complex and of the class C core vacuole/endosome tethering (CORVET) complex. CORVET is required for vacuolar transport of SYP22. HOPS is required for the central vacuole formation. Involved in root development (PubMed:29463724). Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways (By similarity)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LN91;Q9LN97", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0030897 HOPS complex;GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0010008 endosome membrane", "go_biological_process": "GO:0048284 organelle fusion;GO:0006886 intracellular protein transport;GO:0007032 endosome organization;GO:0007033 vacuole organization;GO:0006904 vesicle docking involved in exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4IDS7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDU4-1", "uniprot_id": "MBOA1_ARATH", "mass": 52152.0, "length": 462, "protein_name": "Lysophospholipid acyltransferase 1", "gene_name": "LPCAT1", "organism": "Arabidopsis", "refseq_name": "MBOAT (membrane bound O-acyl transferase) family protein", "refseq_ac": "NP_172724", "gene_names_uniprotkb": "LPCAT1; LPLAT1; T12C24.17", "gene_names_refseq": "AtLPLAT1; LPCAT1; LPLAT1; T12C24.17; T12C24_17; lysophosphatidylcholine acyltransferase 1; lysophospholipid acyltransferase 1", "protein_names_uniprotkb": "Lysophospholipid acyltransferase 1; 1-acylglycerophosphocholine O-acyltransferase; 1-acylglycerophosphoethanolamine O-acyltransferase; 1-acylglycerophosphoserine O-acyltransferase; 2.3.1.-; 2.3.1.23; 2.3.1.n6; 2.3.1.n7; AtLPLAT1; LPCAT1; LPEAT; LPGAT; LPSAT; Lysophosphatidylcholine acyltransferase 1; Lysophosphatidylethanolamine acyltransferase; Lysophosphatidylglycerol acyltransferase; Lysophosphatidylserine acyltransferase", "protein_names_refseq": "MBOAT (membrane bound O-acyl transferase) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12640)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;18154737;22233193;22923678;22932756;23150634;24189065;25268378;27862469;31511316", "class_list": "", "function": "Lysophospholipid acyltransferase with broad specificity (PubMed:18154737). Mediates the conversion of lysophosphatidylethanolamine (1-acyl-sn-glycero-3-phosphoethanolamine or LPE) into phosphatidylethanolamine (1,2-diacyl-sn-glycero-3-phosphoethanolamine or PE) (LPEAT activity) (PubMed:18154737). Catalyzes the acylation of lysophosphatidylserine (1-acyl-2-hydroxy-sn-glycero-3-phospho-L-serine or LPS) into phosphatidylserine (1,2-diacyl-sn-glycero-3-phospho-L-serine or PS) (LPSAT activity) (PubMed:18154737). Can convert lysophosphatidylcholine (1-acyl-sn-glycero-3-phosphocholine or LPC) into phosphatidylcholine (1,2-diacyl-sn-glycero-3-phosphocholine or PC) (LPCAT activity) (PubMed:18154737, PubMed:24189065, PubMed:25268378). Exhibits preference for C18-unsaturated acyl-CoA when transferring an acyl group to lysophosphatidylcholine (PubMed:24189065, PubMed:25268378). Can also utilize lysophosphatidylglycerol (LPG) as substrate in vitro (PubMed:18154737). Has neither activity towards lysophosphatidic acid (LPA) nor lysophosphatidylinositol (LPI) (PubMed:18154737). Lysophospholipid acyltransferases catalyze the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle (Probable). The primary function of the Lands cycle is to provide a route for acyl remodeling to modify fatty acid (FA) composition of phospholipids derived from the Kennedy pathway (PubMed:22932756, PubMed:23150634). Is involved in PC acyl editing and phosphocholine headgroup exchange between PC and diacylglycerols. This processes control the majority of acyl fluxes through PC to provide polyunsaturated fatty acids for triacylglycerols synthesis in seeds (PubMed:22932756, PubMed:24189065). Involved with LPCAT2 in the direct incorporation of newly synthesized fatty acids exported form the chloroplast into PC through acyl editing (PubMed:31511316)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RWH4;Q9LN83", "ec_number_list": "2.3.1.23;2.3.1.n6;2.3.1.n7;2.3.1.-;2.3.1.51", "go_molecular_function": "GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity;GO:0071617 lysophospholipid acyltransferase activity;GO:0016746 acyltransferase activity;GO:0106262 1-acylglycerophosphoethanolamine O-acyltransferase activity;GO:0106263 1-acylglycerophosphoserine O-acyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0019432 triglyceride biosynthetic process;GO:0008654 phospholipid biosynthetic process;GO:0030258 lipid modification;GO:0019375 galactolipid biosynthetic process;GO:0045017 glycerolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4IDU4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDW9-1", "uniprot_id": "PTD_ARATH", "mass": 27894.0, "length": 250, "protein_name": "Protein PARTING DANCERS", "gene_name": "PTD", "organism": "Arabidopsis", "refseq_name": "DNA ligase-like protein", "refseq_ac": "NP_563913", "gene_names_uniprotkb": "PTD; F13K23.4", "gene_names_refseq": "F13K23.4; F13K23_4", "protein_names_uniprotkb": "Protein PARTING DANCERS; 3.1.-.-; AtPTD", "protein_names_refseq": "DNA ligase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12790)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;16394097;17208327;21771883;24656236;27862469", "class_list": "", "function": "Required for chromosome segregation during meiosis (PubMed:16394097). During diakinesis and prometaphase I, essential for the formation of class I meiotic crossovers and homologous recombination (PubMed:16394097, PubMed:21771883, PubMed:24656236)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1WW75;Q8L9H8;Q9LPX0", "ec_number_list": "", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome;GO:0009507 chloroplast", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0007059 chromosome segregation;GO:0007140 male meiotic nuclear division;GO:0010845 positive regulation of reciprocal meiotic recombination;GO:0007131 reciprocal meiotic recombination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IDW9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IDY5-1", "uniprot_id": "BTSL1_ARATH", "mass": 144092.0, "length": 1254, "protein_name": "Zinc finger protein BRUTUS-like At1g18910", "gene_name": "F14D16.3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F14D16.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein BRUTUS-like At1g18910", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18910)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;15539473;27862469", "class_list": "", "function": "Probable E3 ubiquitin-protein ligase that may regulate the response to iron deficiency and thus contributes to iron homeostasis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YB6;Q9LMD9", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "GO:0006879 intracellular iron ion homeostasis;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0010039 response to iron ion;GO:0098711 iron ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4IDY5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IE66-1", "uniprot_id": "PRP22_ARATH", "mass": 80515.0, "length": 717, "protein_name": "Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10", "gene_name": "RID1", "organism": "Arabidopsis", "refseq_name": "RNA helicase family protein", "refseq_ac": "NP_173961", "gene_names_uniprotkb": "RID1; T1K7.25", "gene_names_refseq": "RID1; ROOT INITIATION DEFECTIVE 1; T1K7.25; T1K7_25", "protein_names_uniprotkb": "Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10; 3.6.4.13; DEAH RNA helicase homolog PRP22; Protein ROOT INITIATION DEFECTIVE 1", "protein_names_refseq": "RNA helicase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G26370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;23771891;24265739;27532006;27862469", "class_list": "", "function": "Involved in pre-mRNA splicing. Plays a role during development in processes such as meristem maintenance, leaf morphogenesis and root morphogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZC3", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003725 double-stranded RNA binding;GO:0004386 helicase activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0043484 regulation of RNA splicing;GO:0045943 positive regulation of transcription by RNA polymerase I", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IE66-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IEB6-1", "uniprot_id": "F4IEB6_ARATH", "mass": 24315.0, "length": 213, "protein_name": "PLATZ transcription factor family protein", "gene_name": "F6N18.8; F6N18_8", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F6N18.8; F6N18_8", "gene_names_refseq": "", "protein_names_uniprotkb": "PLATZ transcription factor family protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32700)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4IEB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IEM5-1", "uniprot_id": "GCR2_ARATH", "mass": 46451.0, "length": 410, "protein_name": "LanC-like protein GCR2", "gene_name": "GCR2", "organism": "Arabidopsis", "refseq_name": "G protein coupled receptor", "refseq_ac": "NP_175700", "gene_names_uniprotkb": "GCR2; F14G24.19; GPCR", "gene_names_refseq": "F14G24.19; F14G24_19; G protein coupled receptor; G-PROTEIN COUPLED RECEPTOR 2; GCR2; GPCR", "protein_names_uniprotkb": "LanC-like protein GCR2; G protein-coupled receptor 2", "protein_names_refseq": "G protein coupled receptor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G52920)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;17347412;17894782;17991845;18714360;19286934;27862469", "class_list": "", "function": "May play a role in abscisic acid (ABA) signaling., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C929", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0010427 abscisic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0019898 extrinsic component of membrane", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0031179 peptide modification;GO:0009738 abscisic acid-activated signaling pathway;GO:0009787 regulation of abscisic acid-activated signaling pathway;GO:0010231 maintenance of seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4IEM5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IF36-1", "uniprot_id": "FGT1_ARATH", "mass": 143617.0, "length": 1295, "protein_name": "Protein FORGETTER 1", "gene_name": "FGT1", "organism": "Arabidopsis", "refseq_name": "RING/FYVE/PHD zinc finger superfamily protein", "refseq_ac": "NP_178053", "gene_names_uniprotkb": "FGT1; EMB1135; YUP8H12R.3", "gene_names_refseq": "EMB1135; YUP8H12R.3; YUP8H12R_3; embryo defective 1135", "protein_names_uniprotkb": "Protein FORGETTER 1; Protein EMBRYO DEFECTIVE 1135", "protein_names_refseq": "RING/FYVE/PHD zinc finger superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79350)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;15266054;18463617;18684657;19376835;20466843;21768351;23111157;23328941;23660473;23776212;24601666;25561503;26091701;27680998;27862469;29167316;30833711", "class_list": "", "function": "Required for normal embryo development (PubMed:15266054, PubMed:18684657). Necessary to acquire heat stress (HS) memory, by modulating nucleosome occupancy and regulating heat-induced gene expression. Associates globally with the nucleosome-poor regions flanking the transcription units of expressed genes. Binds to the promoter regions, primarily to the proximal promoter just upstream of the transcriptional start sites (TSS) and somewhat more weakly to the region downstream of the transcription termination site (TTS), of actively expressed genes (e.g. HSA32, HSP18.2 and HSP22.0) in a heat-dependent fashion (PubMed:27680998)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64516", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0031490 chromatin DNA binding;GO:0042393 histone binding;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009408 response to heat;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "F4IF36-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IHY7-1", "uniprot_id": "PTA12_ARATH", "mass": 60895.0, "length": 527, "protein_name": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic", "gene_name": "PTAC12", "organism": "Arabidopsis", "refseq_name": "plastid transcriptionally active 12", "refseq_ac": "NP_181011", "gene_names_uniprotkb": "PTAC12; HMR; PAP5; T31E10.2; TAC12", "gene_names_refseq": "HEMERA; HMR; PTAC12; T31E10.2; T31E10_2; TAC12; plastid transcriptionally active 12", "protein_names_uniprotkb": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic; PEP-associated protein 5; Plastid-encoded RNA polymerase-associated protein 5; Protein HEMERA; pTAC12", "protein_names_refseq": "plastid transcriptionally active 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34640)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;11910074;16326926;20603003;21949211;22010110;22895253;22902688;23082802;25944101;27862469;29283431;30635559;33001465;33391315;33824329;36063057", "class_list": "", "function": "Involved in plastid gene expression (PubMed:16326926). Acidic transcriptional coactivator necessary for the transactivation of many PIFs target genes (class B genes), particularly during the regulation of hypocotyl growth (PubMed:25944101). Plays dual opposite roles in regulating hypocotyl growth, preventing it in red and far-red conditions, but promoting it otherwise (PubMed:25944101). Required in the nucleus for the initiation of photomorphogenesis mediated by phytochromes (PHYs) (e.g. PHYA and PHYB) by mediating PHYs localization to photobodies, especially in response to red and far-red light, and implicating phytochrome nuclear bodies as sites of proteolysis for PHYs and PIFs proteins (e.g. PIF1 and PIF3) (PubMed:20603003, PubMed:22895253, PubMed:25944101). Acts downstream of PHYs and upstream of DET1 (PubMed:20603003, PubMed:22895253). Involved in UV tolerance in both roots and hypocotyls, specifically in dark conditions (PubMed:29283431). Element of a PIF4/HMR/MED14-dependent thermoresponsive process; acts as a PIF4 transcriptional coactivator to trigger the thermoresponsive growth-relevant genes (e.g. mainly involved in biosynthesis and signaling of the phytohormone auxin) and promote warm-temperature-dependent (e.g. 27 degrees Celsius) PIF4 and MED14 stabilization and accumulation, being more prominently involved in long days (LD) and continuous red light (Rc) than in short days (SD), thus modulating warm temperature elicitation of MED14-dependent thermomorphogenesis (e.g. hypocotyl elongation) (PubMed:30635559, PubMed:33824329, PubMed:36063057)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64683;Q8GY76", "ec_number_list": "", "go_molecular_function": "GO:0140537 transcription regulator activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000427 plastid-encoded plastid RNA polymerase complex;GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0009266 response to temperature stimulus;GO:0045893 positive regulation of DNA-templated transcription;GO:0009411 response to UV;GO:0030163 protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "F4IHY7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IIM1-1", "uniprot_id": "CSI1_ARATH", "mass": 230706.0, "length": 2150, "protein_name": "Protein CELLULOSE SYNTHASE INTERACTIVE 1", "gene_name": "CSI1", "organism": "Arabidopsis", "refseq_name": "binding protein", "refseq_ac": "NP_179803", "gene_names_uniprotkb": "CSI1; POM2; T16B14.2", "gene_names_refseq": "CSI1; POM-POM 2; POM2; T16B14.2; cellulose synthase-interactive protein 1", "protein_names_uniprotkb": "Protein CELLULOSE SYNTHASE INTERACTIVE 1; Protein POM-POM 2", "protein_names_refseq": "binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22125)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;20616083;21150290;22190487;22294619;22427339;22751327;23111157;23572148;23623553;23776212;24368796;25262237;25535279;25561503;27862469;29654922;7743935", "class_list": "", "function": "Regulator of the microtubular cytoskeleton (PubMed:22427339). Microtubule-associated protein essential for the functional association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules (PubMed:22190487, PubMed:22294619, PubMed:22751327, PubMed:23623553, PubMed:24368796). Promotes dynamics of CSCs in the plasma membrane (PubMed:20616083, PubMed:21150290, PubMed:22190487, PubMed:22294619, PubMed:22751327, PubMed:23623553, PubMed:24368796). Regulates primary cell wall biosynthesis and cellulose microfibrils organization (PubMed:20616083, PubMed:21150290, PubMed:23623553). Required for the regulation of root cell elongation/expansion (PubMed:20616083, PubMed:21150290, PubMed:22294619, PubMed:22427339, PubMed:7743935). Necessary for the formation of ovules, pollen cell wall morphogenesis and pollen tube development (PubMed:22294619). Involved in anther dehiscence, via dehydration-induced microtubule depolymerization and reorganization. May play a role in early gynoecial development (PubMed:22427339)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]; Target of the cellulase synthase (CESA) complexes (CSCs) trafficking inhibitor CESTRIN, which reduces cellulose content and alters anisotropic growth of hypocotyls; CESTRIN treatment inhibits the dynamics of CSCs., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUD1;Q6NPD6;Q8RUY6", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0051592 response to calcium ion;GO:0008360 regulation of cell shape;GO:0009414 response to water deprivation;GO:0070507 regulation of microtubule cytoskeleton organization;GO:0043622 cortical microtubule organization", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "F4IIM1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IMH3-1", "uniprot_id": "NOC4_ARATH", "mass": 65348.0, "length": 577, "protein_name": "Protein NUCLEOLAR COMPLEX ASSOCIATED 4", "gene_name": "NOC4", "organism": "Arabidopsis", "refseq_name": "CCAAT-binding factor", "refseq_ac": "NP_179316", "gene_names_uniprotkb": "NOC4; EMB2762; T23A1.11", "gene_names_refseq": "EMB2762; EMBRYO DEFECTIVE 2762; NOC4; NucleOlar Complex associated 4; T23A1.11; T23A1_11", "protein_names_uniprotkb": "Protein NUCLEOLAR COMPLEX ASSOCIATED 4; AtNoc4; Protein EMBRYO DEFECTIVE 2762", "protein_names_refseq": "CCAAT-binding factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17250)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;15266054;23382868;27862469", "class_list": "", "function": "Essential protein required during embryogenesis (PubMed:15266054, PubMed:23382868). Involved in nucleolar processing of ribosomal RNA (rRNA) 40S and 90S ribosomal subunits and ribosome assembly; early in ribosome biogenesis, especially required during the maturation of 5.8S rRNA (PubMed:23382868). Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22737;Q8VZE1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0031965 nuclear membrane;GO:0030692 Noc4p-Nop14p complex", "go_biological_process": "GO:0006364 rRNA processing;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4IMH3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IN69-1", "uniprot_id": "MD33B_ARATH", "mass": 139564.0, "length": 1275, "protein_name": "Mediator of RNA polymerase II transcription subunit 33B", "gene_name": "MED33B", "organism": "Arabidopsis", "refseq_name": "reduced epidermal fluorescence 4", "refseq_ac": "NP_566125", "gene_names_uniprotkb": "MED33B; F11L15.1; MED24B; MED5B; MED5_1; REF4; T9J23.26", "gene_names_refseq": "F11L15.1; MED33B; REDUCED EPIDERMAL FLUORESCENCE 4; REF4; T9J23.25", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 33B; AtREF4; Protein REDUCED EPIDERMAL FLUORESCENCE 4", "protein_names_refseq": "reduced epidermal fluorescence 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G48110)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;17560376;18430946;22021418;22167189;23328941;23776212;27862469;8709959", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39169;Q9ZU78", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009698 phenylpropanoid metabolic process;GO:2000762 regulation of phenylpropanoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IN69-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IPE3-1", "uniprot_id": "IDD15_ARATH", "mass": 50140.0, "length": 445, "protein_name": "Zinc finger protein SHOOT GRAVITROPISM 5", "gene_name": "SGR5", "organism": "Arabidopsis", "refseq_name": "C2H2-like zinc finger protein", "refseq_ac": "NP_001030949", "gene_names_uniprotkb": "SGR5; F14H20.1; IDD15", "gene_names_refseq": "ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15; ATIDD15; F14H20.1; F14H20_1; IDD15; INDETERMINATE(ID)-DOMAIN 15; SGR5; SHOOT GRAVITROPISM 5", "protein_names_uniprotkb": "Zinc finger protein SHOOT GRAVITROPISM 5; AtIDD15; Protein indeterminate-domain 15", "protein_names_refseq": "C2H2-like zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G01940)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14993207;15236668;16784536;16813575;18259878;24039602;27862469;9210330", "class_list": "", "function": "Transcription factor involved in inflorescence stems gravitropism, probably by regulating starch accumulation in amyloplasts of graviperceptive cells. Required for stem circumnutation movements. Regulates lateral organ morphogenesis and gravitropic responses (PubMed:24039602). Acts cooperatively with IDD16 to control silique and branche orientation (PubMed:24039602). Involved in the establishment of auxin gradients through the regulation of auxin biosynthesis and transport (PubMed:24039602)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H5E9;Q0WVN8;Q2V4B1;Q9ZPT0", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009590 detection of gravity;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009630 gravitropism;GO:0009959 negative gravitropism", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IPE3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IPK2-1", "uniprot_id": "TAF14_ARATH", "mass": 30363.0, "length": 268, "protein_name": "Transcription initiation factor TFIID subunit 14", "gene_name": "TAF14", "organism": "Arabidopsis", "refseq_name": "TBP-associated factor 14", "refseq_ac": "NP_001189547", "gene_names_uniprotkb": "TAF14; T27K22.13; YAF9B", "gene_names_refseq": "T27K22.13; T27K22_13; TAF14; TBP-associated factor 14; YAF9b; homolog of yeast YAF9 b", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 14; AtTAF14; Protein AF-9 homolog b; TBP-associated factor 14", "protein_names_refseq": "TBP-associated factor 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18000)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;15527982;17340043;21282526;23017898;27862469", "class_list": "", "function": "Negative regulator of flowering controlling the H4K5 acetylation levels in the FLC and FT chromatin. Positively regulates FLC expression. Component of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of a NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SL46", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0035267 NuA4 histone acetyltransferase complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IPK2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IPY2-1", "uniprot_id": "SYCM_ARATH", "mass": 63914.0, "length": 563, "protein_name": "Cysteine--tRNA ligase, chloroplastic/mitochondrial", "gene_name": "SYCO", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "SYCO; FIONA; SYCO ARATH; T16B12.16; cysteinyl t-RNA synthetase", "gene_names_refseq": "", "protein_names_uniprotkb": "Cysteine--tRNA ligase, chloroplastic/mitochondrial; 6.1.1.16; CysRS; Cysteinyl-tRNA synthetase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31170)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;10824085;14593172;21135240;22060019;27862469", "class_list": "", "function": "Required for female gametophyte development. Is necessary for the fusion of central cell nuclei and programmed cell death (PCD) of the antipodals., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82267;Q0WLQ1;Q93VX6", "ec_number_list": "6.1.1.16", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004817 cysteine-tRNA ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0042407 cristae formation;GO:0043067 regulation of programmed cell death;GO:0006423 cysteinyl-tRNA aminoacylation;GO:0010197 polar nucleus fusion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4IPY2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IQV7-1", "uniprot_id": "SCY2_ARATH", "mass": 64711.0, "length": 575, "protein_name": "Preprotein translocase subunit SCY2, chloroplastic", "gene_name": "SCY2", "organism": "Arabidopsis", "refseq_name": "SecY protein transport family protein", "refseq_ac": "NP_180711", "gene_names_uniprotkb": "SCY2; EMB2289; T9H9.5", "gene_names_refseq": "EMB2289; EMBRYO DEFECTIVE 2289; SCY2; SECY HOMOLOG 2; T9H9.5; T9H9_5", "protein_names_uniprotkb": "Preprotein translocase subunit SCY2, chloroplastic; Protein EMBRYO DEFECTIVE 2289", "protein_names_refseq": "SecY protein transport family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31530)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;14993207;21051552;27862469", "class_list": "", "function": "Involved in protein export. Probably interacts with other proteins to allow the postimport or conservative sorting pathway for inner membrane proteins in plastids. Central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4F6;Q9SIQ4", "ec_number_list": "", "go_molecular_function": "GO:0005048 signal sequence binding;GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009526 plastid envelope;GO:0031969 chloroplast membrane;GO:0033097 amyloplast membrane", "go_biological_process": "GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation;GO:0009658 chloroplast organization;GO:0010027 thylakoid membrane organization;GO:0072598 protein localization to chloroplast", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4IQV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IRR2-1", "uniprot_id": "SAD2_ARATH", "mass": 119247.0, "length": 1040, "protein_name": "Importin beta-like SAD2", "gene_name": "SAD2", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": "NP_180724", "gene_names_uniprotkb": "SAD2; EMA1; URM9", "gene_names_refseq": "EMA1; SAD2; SUPER SENSITIVE TO ABA AND DROUGHT2; T9H9.18; T9H9_18; UNARMED 9; URM9; enhanced miRNA activity 1", "protein_names_uniprotkb": "Importin beta-like SAD2; Protein ENHANCED MIRNA ACTIVITY 1; Protein SUPER SENSITIVE TO ABA AND DROUGHT 2; Protein UNARMED 9", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31660)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11910074;16889648;17993626;18713401;19234066;21984696;22223895;27862469", "class_list": "", "function": "Functions probably in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with other importin subunits (Probable). Involved in the regulation of the abscisic acid (ABA)-mediated pathway in response to cold or salt stress (PubMed:16889648). Involved in UV-B responses by regulating accumulation of UV-absorbing pigments through mediation of MYB4 nuclear transport (PubMed:17993626). Involved in trichome initiation by controlling GL1, GL2, GL3 and TTG1 transcription and may affect an upstream regulator of GL3 and disrupt complex function (PubMed:18713401, PubMed:19234066). Acts as a negative regulator miRNA activity by regulating miRNA loading into AGO1 complexes (PubMed:21984696)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56W71;Q8GZ12;Q9SIP2", "ec_number_list": "", "go_molecular_function": "GO:0031267 small GTPase binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IRR2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ISV9-1", "uniprot_id": "APD4_ARATH", "mass": 44536.0, "length": 399, "protein_name": "E3 ubiquitin-protein ligase APD4", "gene_name": "APD4", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_001118467", "gene_names_uniprotkb": "APD4; F16M14.13", "gene_names_refseq": "ABERRANT POLLEN DEVELOPMENT 4; APD4", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase APD4; 2.3.2.27; Protein ABERRANT POLLEN DEVELOPMENT 4", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38195)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;16244158;22897245;27862469", "class_list": "", "function": "Involved in pollen mitosis II (PMII) regulation during male gametogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IS12;O80445;Q4PL85;Q84RL2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0043066 negative regulation of apoptotic process;GO:0045931 positive regulation of mitotic cell cycle;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4ISV9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4ITM1-1", "uniprot_id": "RGSL1_ARATH", "mass": 44554.0, "length": 398, "protein_name": "E3 ubiquitin-protein ligase RSL1", "gene_name": "RSL1", "organism": "Arabidopsis", "refseq_name": "RING/U-box protein with C6HC-type zinc finger", "refseq_ac": "NP_180182", "gene_names_uniprotkb": "RSL1; T19L18.6", "gene_names_refseq": "RSL1; Ring finger of Seed Longevity 1; T19L18.6; T19L18_6", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RSL1; 2.3.2.31; Protein RING FINGER OF SEED LONGEVITY 1; RING-type E3 ubiquitin transferase RSL1", "protein_names_refseq": "RING/U-box protein with C6HC-type zinc finger", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26130)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11983057;12446796;24388521;25330042;27495812;27862469", "class_list": "", "function": "Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (PubMed:24388521). Negative regulator of the abscisic acid (ABA) signaling pathway which targets PYL4 and PYR1 ABA receptors in plasma membrane to promote their FREE1/FYVE1-dependent trafficking and degradation upon ubiquitynation; this process involves clathrin-mediated endocytosis and trafficking through the ESCRT pathway (PubMed:25330042, PubMed:27495812). Involved in the maintenance of seed longevity (PubMed:24388521). May enhance gibberellins responses (PubMed:24388521)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80984", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0061630 ubiquitin protein ligase activity;GO:0004523 RNA-DNA hybrid ribonuclease activity;GO:0031624 ubiquitin conjugating enzyme binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0000151 ubiquitin ligase complex;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0000209 protein polyubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009738 abscisic acid-activated signaling pathway;GO:0009788 negative regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4ITM1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IUX6-1", "uniprot_id": "RENT2_ARATH", "mass": 133962.0, "length": 1181, "protein_name": "Regulator of nonsense transcripts UPF2", "gene_name": "UPF2", "organism": "Arabidopsis", "refseq_name": "regulator of nonsense transcripts UPF2", "refseq_ac": "NP_181459", "gene_names_uniprotkb": "UPF2; T16B24.10", "gene_names_refseq": "T16B24.10; T16B24_10", "protein_names_uniprotkb": "Regulator of nonsense transcripts UPF2; AtUpf2; Nonsense mRNA reducing factor UPF2; Up-frameshift suppressor 2 homolog", "protein_names_refseq": "regulator of nonsense transcripts UPF2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39260)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;19602621;20466843;22353561;23328941;25561503;27862469;29654922;30833711", "class_list": "", "function": "Recruited by UPF3 associated with the EJC core at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. In cooperation with UPF3 stimulates both ATPase and RNA helicase activities of UPF1. Binds spliced mRNA (By similarity). Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC). Required for plant development and adaptation to environmental stresses, including plant defense and response to wounding., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80955", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0048471 perinuclear region of cytoplasm;GO:0035145 exon-exon junction complex", "go_biological_process": "GO:0009611 response to wounding;GO:0048571 long-day photoperiodism;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0042742 defense response to bacterium;GO:0009863 salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4IUX6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IV16-1", "uniprot_id": "TPK2_ARATH", "mass": 30214.0, "length": 267, "protein_name": "Thiamine pyrophosphokinase 2", "gene_name": "TPK2", "organism": "Arabidopsis", "refseq_name": "thiamine pyrophosphokinase 2", "refseq_ac": "NP_566026", "gene_names_uniprotkb": "TPK2; F16B22.24", "gene_names_refseq": "F16B22.24; TPK2; thiamin pyrophosphokinase 2", "protein_names_uniprotkb": "Thiamine pyrophosphokinase 2; 2.7.6.2; AtTPK2; Thiamine kinase 2", "protein_names_refseq": "thiamine pyrophosphokinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G44750)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;17611796;27862469", "class_list": "", "function": "Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP) (PubMed:17611796). TPP is an active cofactor for enzymes involved in glycolysis and energy production (PubMed:17611796). Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (PubMed:17611796)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80514;Q94B25", "ec_number_list": "2.7.6.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004788 thiamine diphosphokinase activity;GO:0030975 thiamine binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0009229 thiamine diphosphate biosynthetic process;GO:0006772 thiamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IV16-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IV66-1", "uniprot_id": "RNE_ARATH", "mass": 111552.0, "length": 1001, "protein_name": "Ribonuclease E/G-like protein, chloroplastic", "gene_name": "RNE", "organism": "Arabidopsis", "refseq_name": "RNAse E/G-like protein", "refseq_ac": "NP_001189510", "gene_names_uniprotkb": "RNE; G; T23O15.10", "gene_names_refseq": "RNAse E/G-like; RNEE/G; RNE; RNase E; T23O15.10; T23O15_10", "protein_names_uniprotkb": "Ribonuclease E/G-like protein, chloroplastic; 3.1.26.-; RNase E/G-like protein; RNase E", "protein_names_refseq": "RNAse E/G-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04270)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;18441049;18515828;21105931;22735703;27862469", "class_list": "", "function": "Involved in intercistronic processing of primary transcripts from chloroplast operons. The endonucleolytic activity of the enzyme depends on the number of phosphates at the 5' end, is inhibited by structured RNA, and preferentially cleaves A/U-rich sequences., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4IV67;F4IV69;Q8GZQ4;Q8RWB3;Q9M498;Q9SI08", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004540 RNA nuclease activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006364 rRNA processing;GO:0009658 chloroplast organization;GO:0010239 chloroplast mRNA processing;GO:1901259 chloroplast rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4IV66-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IVI0-1", "uniprot_id": "BUB1_ARATH", "mass": 61123.0, "length": 525, "protein_name": "Mitotic checkpoint serine/threonine-protein kinase BUB1", "gene_name": "BUB1", "organism": "Arabidopsis", "refseq_name": "protein kinase and Mad3-BUB1-I domain-containing protein", "refseq_ac": "NP_179656", "gene_names_uniprotkb": "BUB1; F23N11.4", "gene_names_refseq": "F23N11.4; F23N11_4", "protein_names_uniprotkb": "Mitotic checkpoint serine/threonine-protein kinase BUB1; 2.7.11.1; AtBUB1; Protein BUDDING UNINHIBITED BY BENZYMIDAZOL 1", "protein_names_refseq": "protein kinase and Mad3-BUB1-I domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20635)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;21687678;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that performs 2 crucial functions during mitosis: it is essential for spindle-assembly checkpoint signaling and for correct chromosome alignment. Has a key role in the assembly of checkpoint proteins at the kinetochore. Acts as a substrate for anaphase-promoting complex or cyclosome (APC/C). Necessary for ensuring proper chromosome segregation. Can regulate chromosome segregation in a kinetochore-independent manner. The BUB1-BUB3 complex plays a role in the inhibition of APC/C when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. Kinase activity is essential for inhibition of APC/CCDC20 and for chromosome alignment but does not play a major role in the spindle-assembly checkpoint activity (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8D9", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000776 kinetochore;GO:0000940 outer kinetochore", "go_biological_process": "GO:0007059 chromosome segregation;GO:0051301 cell division;GO:0051754 meiotic sister chromatid cohesion, centromeric;GO:0007094 mitotic spindle assembly checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4IVI0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IVL6-1", "uniprot_id": "GRV2_ARATH", "mass": 279073.0, "length": 2554, "protein_name": "DnaJ homolog subfamily C GRV2", "gene_name": "GRV2", "organism": "Arabidopsis", "refseq_name": "DNAJ heat shock N-terminal domain-containing protein", "refseq_ac": "NP_180257", "gene_names_uniprotkb": "GRV2; F12C20.7; GFS2; KAM2", "gene_names_refseq": "F12C20.7; F12C20_7; GRAVITROPISM DEFECTIVE 2; GRV2; KAM2; KATAMARI2", "protein_names_uniprotkb": "DnaJ homolog subfamily C GRV2; Protein GRAVITROPISM DEFECTIVE 2; Protein GREEN FLUORESCENT SEED 2; Protein KATAMARI2", "protein_names_refseq": "DNAJ heat shock N-terminal domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26890)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10617197;15466218;17259264;17293568;17971043;18463617;18686298;19376835;20466843;23111157;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25561503;26091701;27862469;29167316;30833711", "class_list": "", "function": "Required for endosome formation, vacuolar protein sorting and determination of the embryo growth axis. Necessary for the transport of proteins into protein storage vacuoles (PSVs). Participates in vesicle trafficking from the endosome to the central vacuole. Involved in the regulation of shoot phototropism and gravitropism, probably through the positioning of specialized amyloplasts (statoliths) in endodermal cells., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H5B3;O81018", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0031902 late endosome membrane", "go_biological_process": "GO:2000641 regulation of early endosome to late endosome transport;GO:0000578 embryonic axis specification;GO:0006897 endocytosis;GO:0042594 response to starvation;GO:0051301 cell division", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "F4IVL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IVV0-1", "uniprot_id": "RIC1_ARATH", "mass": 24140.0, "length": 224, "protein_name": "CRIB domain-containing protein RIC1", "gene_name": "RIC1", "organism": "Arabidopsis", "refseq_name": "ROP-interactive CRIB motif-containing protein 1", "refseq_ac": "NP_180904", "gene_names_uniprotkb": "RIC1; F4P9.23", "gene_names_refseq": "F4P9.23; F4P9_23; RIC1; ROP-interactive CRIB motif-containing protein 1", "protein_names_uniprotkb": "CRIB domain-containing protein RIC1; ROP-interactive CRIB motif-containing protein 1; Target of ROP protein RIC1", "protein_names_refseq": "ROP-interactive CRIB motif-containing protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33460)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11752391;15766531;19818614;21535258;22683261;23078108;27862469", "class_list": "", "function": "Functions as a downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Required for cortical microtubule organization. Promotes microtubule bundling and formation of well-ordered microtubule arrays in the neck region of pavement cells. This restricts cell lateral expansion to generate the narrow neck morphology of pavement cells. Its function is inhibited when it interacts with activated ARAC4/ROP2. Represses ARAC4/ROP2 activation and antagonizes the RIC4-actin pathway that promotes the assembly of cortical actin microfilaments. Acts as a downstream effector of ARAC3/ROP6 which functions in a signaling pathway that negatively regulates clathrin-mediated endocytosis and internalization of PIN1 and PIN2. Required for the asymmetric auxin distribution during root gravitropism and vascular patterning. Positively regulates auxin responses, but negatively regulates ABA responses during lateral root development and primary root elongation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22796", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016324 apical plasma membrane;GO:0010005 cortical microtubule, transverse to long axis", "go_biological_process": "GO:0000902 cell morphogenesis;GO:0031122 cytoplasmic microtubule organization;GO:0009860 pollen tube growth;GO:0010215 cellulose microfibril organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4IVV0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IW47-1", "uniprot_id": "TKTC2_ARATH", "mass": 79922.0, "length": 741, "protein_name": "Transketolase-2, chloroplastic", "gene_name": "TKL-2", "organism": "Arabidopsis", "refseq_name": "Transketolase", "refseq_ac": "NP_001324258", "gene_names_uniprotkb": "TKL-2; F4L23.20", "gene_names_refseq": "F4L23.20; TKL2; transketolase 2", "protein_names_uniprotkb": "Transketolase-2, chloroplastic; 2.2.1.1; TK", "protein_names_refseq": "Transketolase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45290)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;14593172;17272265;18431481;18463617;20466843;22214485;22223895;23572148;25561503;26091701;27862469;28011693", "class_list": "", "function": "Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (By similarity). Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process (PubMed:22214485)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22143;Q93ZH6", "ec_number_list": "2.2.1.1", "go_molecular_function": "GO:0046872 metal ion binding;GO:0004802 transketolase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006098 pentose-phosphate shunt;GO:0019253 reductive pentose-phosphate cycle", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4IW47-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IXW2-1", "uniprot_id": "BIG5_ARATH", "mass": 192883.0, "length": 1739, "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 5", "gene_name": "BIG5", "organism": "Arabidopsis", "refseq_name": "HOPM interactor 7", "refseq_ac": "NP_001190006", "gene_names_uniprotkb": "BIG5; BEN1; F7K15_150; MIN7", "gene_names_refseq": "ATMIN7; BEN1; BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1; HOPM interactor 7; MIN7", "protein_names_uniprotkb": "Brefeldin A-inhibited guanine nucleotide-exchange protein 5; ARF guanine-nucleotide exchange factor BIG5; AtMIN7; BIG5; Protein BEN1; Protein BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE 1; Protein HOPM INTERACTOR 7", "protein_names_refseq": "HOPM interactor 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G43300)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "11130713;16840699;18463617;19230664;19376835;20466843;21670267;21768351;22223895;23111157;23328941;23572148;23660473;23737757;23776212;24601666;25561503;26091701;26941089;27532006;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of early endosomal vesicle trafficking, particularly at the trans-Golgi-network/early endosome (TGN/EE), but is also involved in the endocytosis process (PubMed:23737757). Together with VPS45/BEN2 required for polar PIN-FORMED (PIN) proteins localization, for their dynamic repolarization, and consequently for auxin activity gradient formation and auxin-related developmental processes (e.g. embryonic patterning, organogenesis and vasculature venation patterning) (PubMed:23737757). Target of hopM1, a conserved Pseudomonas syringae virulence protein that directs the protein to its own proteasome-mediated degradation. Plays a broad role in PAMP-triggered immunity (PTI), effector-triggered immunity (ETI), and salicylic acid (SA)-regulated immunity., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 25, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IXW1;Q0WM86;Q9LXK4", "ec_number_list": "", "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005769 early endosome;GO:0005829 cytosol;GO:0031901 early endosome membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006897 endocytosis;GO:0006955 immune response;GO:0045087 innate immune response;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4IXW2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IY62-1", "uniprot_id": "UGPA3_ARATH", "mass": 99043.0, "length": 883, "protein_name": "UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic", "gene_name": "UGP3", "organism": "Arabidopsis", "refseq_name": "UDP-glucose pyrophosphorylase 3", "refseq_ac": "NP_567031", "gene_names_uniprotkb": "UGP3; F27K19_220", "gene_names_refseq": "UDP-glucose pyrophosphorylase 3; UGP3", "protein_names_uniprotkb": "UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic; 2.7.7.9; UDP-glucose pyrophosphorylase 3", "protein_names_refseq": "UDP-glucose pyrophosphorylase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56040)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;19286968;27862469", "class_list": "", "function": "Involved in the biosynthesis of sulfolipids in the chloroplast. Catalyzes the first committed step in sulfolipid biosynthesis. Converts glucose 1-phosphate to UDP-glucose, the precursor of the polar head of sulfolipid. In addition to glucose 1-phosphate, can use galactose 1-phosphate, but with much lower activity. No uridyltransferase activity with other hexose monophosphates. Specific for UTP and cannot use ATP, CTP, and GTP., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94B70;Q9LY42", "ec_number_list": "2.7.7.9;2.7.7.23;2.7.7.83", "go_molecular_function": "GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity;GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0006048 UDP-N-acetylglucosamine biosynthetic process;GO:0006011 UDP-alpha-D-glucose metabolic process;GO:0046506 sulfolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IY62-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IYM4-1", "uniprot_id": "DEX1_ARATH", "mass": 99711.0, "length": 896, "protein_name": "Protein DEFECTIVE IN EXINE FORMATION 1", "gene_name": "DEX1", "organism": "Arabidopsis", "refseq_name": "defective in exine formation protein (DEX1)", "refseq_ac": "NP_001118602", "gene_names_uniprotkb": "DEX1; MZB10.12", "gene_names_refseq": "DEFECTIVE IN EXINE FORMATION 1; DEX1", "protein_names_uniprotkb": "Protein DEFECTIVE IN EXINE FORMATION 1", "protein_names_refseq": "defective in exine formation protein (DEX1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09090)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;11743117;14593172;27862469", "class_list": "", "function": "Required for exine pattern formation during pollen development, especially for primexine deposition., [UniProtKB, PubMed]", "predicted_glycosites": 13, "predicted_n_glycosites": 12, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "B3H6A9;F4IYM3;Q84TH7;Q9FV29;Q9FV30;Q9SS78", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0071555 cell wall organization;GO:0010208 pollen wall assembly;GO:0010584 pollen exine formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IYM4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4IZR5-1", "uniprot_id": "XPO1B_ARATH", "mass": 123193.0, "length": 1076, "protein_name": "Protein EXPORTIN 1B", "gene_name": "XPO1B", "organism": "Arabidopsis", "refseq_name": "exportin 1B", "refseq_ac": "NP_566193", "gene_names_uniprotkb": "XPO1B; T17B22.20", "gene_names_refseq": "CRM1B; T17B22.20; T17B22_20; XPO1B; exportin 1B", "protein_names_uniprotkb": "Protein EXPORTIN 1B", "protein_names_refseq": "exportin 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03110)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;18791220;27862469", "class_list": "", "function": "Receptor for the leucine-rich nuclear export signal (NES). Binds cooperatively to the NES on its target protein and to the small GTPase Ran in its active GTP-bound form (By similarity). Required for the maternal-to-embryonic transition and during gametophyte development (PubMed:18791220)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WV73;Q94IV0;Q94KD5;Q9M9N0", "ec_number_list": "", "go_molecular_function": "GO:0031267 small GTPase binding;GO:0005049 nuclear export signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005643 nuclear pore;GO:0005737 cytoplasm;GO:0031965 nuclear membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0000055 ribosomal large subunit export from nucleus;GO:0006611 protein export from nucleus;GO:0051028 mRNA transport;GO:0000056 ribosomal small subunit export from nucleus;GO:0009553 embryo sac development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IZR5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J061-1", "uniprot_id": "IQD5_ARATH", "mass": 46899.0, "length": 422, "protein_name": "Protein IQ-DOMAIN 5", "gene_name": "IQD5", "organism": "Arabidopsis", "refseq_name": "IQ-domain 5", "refseq_ac": "NP_001189946", "gene_names_uniprotkb": "IQD5; MKA23.10", "gene_names_refseq": "IQ-domain 5; IQD5", "protein_names_uniprotkb": "Protein IQ-DOMAIN 5; AtIQD5", "protein_names_refseq": "IQ-domain 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22190)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10907853;15308754;15960618;16368012;17317660;18463617;19245862;19376835;20466843;21768351;23111157;23172892;23572148;23660473;23776212;25561503;26091701;26187819;27532006;27862469;28115582;28534650;29976837;30407556;30833711", "class_list": "", "function": "May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin (CaM) calcium sensor proteins to cortical microtubule arrays, thus being a potential scaffold in cellular signaling and trafficking (PubMed:29976837, PubMed:30407556). Binds to microtubules (MTs) and promotes MT assembly and dynamics to modulate pavement cell (PC) morphogenesis via cellulose deposition-dependent anisotropic cell expansion triggered by cellulose synthase complexes (CSCs) (PubMed:29976837, PubMed:30407556). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VHN2;Q9LIE3", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0070507 regulation of microtubule cytoskeleton organization;GO:0007017 microtubule-based process;GO:0051211 anisotropic cell growth;GO:0090436 leaf pavement cell development", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4J061-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J077-1", "uniprot_id": "PATH1_ARATH", "mass": 85646.0, "length": 782, "protein_name": "Protein PAT1 homolog 1", "gene_name": "PAT1H1", "organism": "Arabidopsis", "refseq_name": "Topoisomerase II-associated protein PAT1", "refseq_ac": "NP_188866", "gene_names_uniprotkb": "PAT1H1; RSD2", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein PAT1 homolog 1; AtPAT1H1; Protein ROOT STEM CELL DEFECTIVE 2", "protein_names_refseq": "Topoisomerase II-associated protein PAT1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22270)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10907853;23111157;23328941;23572148;25561503;26956135;27862469;28011693;28154133;29654922;30833711", "class_list": "", "function": "Activator of mRNA decapping. Involved in mRNA decay via decapping (By similarity). Involved in the regulation of root stem cell niche identity. Maintains root stem cell niche stability through the interaction with the negative regulator of jasmonate signaling AFPH2/NINJA, and the regulation of cell division (PubMed:26956135)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 2, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 2, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 2, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WPV0;Q9LHJ0", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0000932 P-body", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0006397 mRNA processing;GO:0051301 cell division;GO:0019827 stem cell population maintenance;GO:0033962 P-body assembly", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4J077-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J0D2-1", "uniprot_id": "PBL36_ARATH", "mass": 52878.0, "length": 476, "protein_name": "Serine/threonine-protein kinase PBL36", "gene_name": "PBL36", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_001030790", "gene_names_uniprotkb": "PBL36", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine/threonine-protein kinase PBL36; 2.7.11.1; PBS1-like protein 36; Receptor-like cytoplasmic kinase PBL36", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G28690)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11130713;17317660;19376835;21768351;23111157;25561503;26091701;27419465;27862469;29654922;29907700;30833711;31922267;34935965", "class_list": "", "function": "Involved in chitin-triggered immune signaling and is required for reactive oxygen species (ROS) production (PubMed:29907700). Acts downstream of SD129 in defense signaling triggered by the pathogen-associated molecular pattern (PAMP) 3-OH-C10:0, a medium-chain 3-hydroxy fatty acid (PubMed:31922267). Together with PBL34 and PBL35, acts downstream of CLV1 and BAM1/BAM3 to mediate the CLV3 and root-active CLE25/CLE26/CLE45 peptides-triggered signals in maintaining shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, respectively (PubMed:34935965). Required for CLE-mediated suppression of protophloem differentiation in the root (PubMed:34935965)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VMS8;A0A1S5M0M9;B3LFC3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002221 pattern recognition receptor signaling pathway;GO:0006952 defense response;GO:0007165 signal transduction;GO:0007166 cell surface receptor signaling pathway;GO:1901653 cellular response to peptide", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "F4J0D2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J0W4-1", "uniprot_id": "MIRO2_ARATH", "mass": 71408.0, "length": 643, "protein_name": "Mitochondrial Rho GTPase 2", "gene_name": "MIRO2", "organism": "Arabidopsis", "refseq_name": "MIRO-related GTP-ase 2", "refseq_ac": "NP_567139", "gene_names_uniprotkb": "MIRO2; T20O10.250", "gene_names_refseq": "ATCBG; CALCIUM BINDING GTP-ASE; MIRO-related GTP-ase 2; MIRO2", "protein_names_uniprotkb": "Mitochondrial Rho GTPase 2; 3.6.5.-; AtCBG; AtMIRO2; Calcium-binding GTPase; Miro-related GTPase 2", "protein_names_refseq": "MIRO-related GTP-ase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63150)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;16832621;18344283;21494602;25561503;27862469", "class_list": "", "function": "Calcium-binding mitochondrial GTPase involved in calcium signaling during salt stress response (PubMed:16832621). May play a role in the progression of embryonic cell division, development of haploid male and female gametes, and pollen tube growth (PubMed:21494602)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93Z33;Q9LYA8", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0007005 mitochondrion organization;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4J0W4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J220-1", "uniprot_id": "LPPE1_ARATH", "mass": 30595.0, "length": 279, "protein_name": "Lipid phosphate phosphatase epsilon 1, chloroplastic", "gene_name": "LPPE1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "LPPE1; F18B3.200", "gene_names_refseq": "", "protein_names_uniprotkb": "Lipid phosphate phosphatase epsilon 1, chloroplastic; 3.1.3.-; AtLPPE1; Phosphatidic acid phosphatase epsilon 1; Plastidic phosphatidic acid phosphatase epsilon 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50920)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;17652095;22060019;27862469", "class_list": "", "function": "Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a secondary role as PAP in plastids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVK7", "ec_number_list": "", "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0006651 diacylglycerol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4J220-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J264-1", "uniprot_id": "PRFB3_ARATH", "mass": 45969.0, "length": 406, "protein_name": "Peptide chain release factor PrfB3, chloroplastic", "gene_name": "PRFB3", "organism": "Arabidopsis", "refseq_name": "peptide chain release factor", "refseq_ac": "NP_191278", "gene_names_uniprotkb": "PRFB3; F28O9.40", "gene_names_refseq": "PrfB3; peptide chain release factor 3", "protein_names_uniprotkb": "Peptide chain release factor PrfB3, chloroplastic; AtPrfB3", "protein_names_refseq": "peptide chain release factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57190)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;21771930;27862469;30962391", "class_list": "", "function": "Involved in the light- and stress-dependent regulation of stability of 3' processed petB transcripts, thus regulating cytochrome b6 accumulation, a rate-limiting step in photosynthetic electron transport. May be recruited to specifically protect petB transcripts against 3'-5' exonucleolytic attack by masking the 3' ends. Does not function as release factor., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7M2;Q9M2M8", "ec_number_list": "", "go_molecular_function": "GO:0043565 sequence-specific DNA binding;GO:0003730 mRNA 3'-UTR binding;GO:0003747 translation release factor activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0043488 regulation of mRNA stability;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4J264-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J2K2-1", "uniprot_id": "FPGS2_ARATH", "mass": 68921.0, "length": 625, "protein_name": "Folylpolyglutamate synthase", "gene_name": "FPGS2", "organism": "Arabidopsis", "refseq_name": "DHFS-FPGS homolog C", "refseq_ac": "NP_187627", "gene_names_uniprotkb": "FPGS2; ATDFC; DFC; FPGS3; FPGSC; T22K18.1", "gene_names_refseq": "A. THALIANA DHFS-FPGS HOMOLOG C; ATDFC; DFC; DHFS-FPGS homolog C; FPGS2; folylpolyglutamate synthetase 2", "protein_names_uniprotkb": "Folylpolyglutamate synthase; 6.3.2.17; DHFS-FPGS homolog C; FPGS; Folylpoly-gamma-glutamate synthetase; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase", "protein_names_refseq": "DHFS-FPGS homolog C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10160)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;11752472;21070407;21233333;22074104;27862469", "class_list": "", "function": "Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2RVP0;Q8W038;Q9SR80", "ec_number_list": "6.3.2.17", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004326 tetrahydrofolylpolyglutamate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005759 mitochondrial matrix;GO:0005829 cytosol", "go_biological_process": "GO:0006730 one-carbon metabolic process;GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process;GO:0009853 photorespiration;GO:0090351 seedling development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4J2K2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J2U9-1", "uniprot_id": "CFM3A_ARATH", "mass": 100170.0, "length": 881, "protein_name": "CRM-domain containing factor CFM3A, chloroplastic/mitochondrial", "gene_name": "CFM3A", "organism": "Arabidopsis", "refseq_name": "CRM family member 3A", "refseq_ac": "NP_188947", "gene_names_uniprotkb": "CFM3A; MXC7.10", "gene_names_refseq": "ATCFM3A; CFM3A; CRM family member 3A", "protein_names_uniprotkb": "CRM-domain containing factor CFM3A, chloroplastic/mitochondrial; AtCFM3a; Protein CRM FAMILY MEMBER 3A", "protein_names_refseq": "CRM family member 3A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23070)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10819329;18799595;27862469;28011693", "class_list": "", "function": "Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3A and CAF1 or CAF2. Required for seed development. May influence the biogenesis of the mitochondrial small ribosomal subunit., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WV92;Q9LS85", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0000373 Group II intron splicing;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4J2U9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J3N2-1", "uniprot_id": "FTSI5_ARATH", "mass": 152258.0, "length": 1320, "protein_name": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic", "gene_name": "FTSHI5", "organism": "Arabidopsis", "refseq_name": "FtsH extracellular protease family", "refseq_ac": "NP_187084", "gene_names_uniprotkb": "FTSHI5; EMB2458; T6K12.4", "gene_names_refseq": "T6K12.4; T6K12_4; emb2458; embryo defective 2458", "protein_names_uniprotkb": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic; AtFTSHI5; Protein EMBRYO DEFECTIVE 2458; Protein FTSH INACTIVE PROTEASE 5", "protein_names_refseq": "FtsH extracellular protease family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04340)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;21286311;22121866;24964212;27862469", "class_list": "", "function": "Required for plastid development during embryogenesis (PubMed:24964212). Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (Probable)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M8Z0", "ec_number_list": "", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004176 ATP-dependent peptidase activity;GO:0016464 chloroplast protein-transporting ATPase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009506 plasmodesma;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0045454 cell redox homeostasis;GO:0009658 chloroplast organization;GO:0045037 protein import into chloroplast stroma;GO:0080093 regulation of photorespiration", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4J3N2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J3R7-1", "uniprot_id": "SPD1_ARATH", "mass": 75061.0, "length": 684, "protein_name": "Protein SEEDLING PLASTID DEVELOPMENT 1", "gene_name": "SPD1", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": "NP_566373", "gene_names_uniprotkb": "SPD1; F13M14.30", "gene_names_refseq": "SEEDLING PLASTID DEVELOPMENT 1; SPD1", "protein_names_uniprotkb": "Protein SEEDLING PLASTID DEVELOPMENT 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10420)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;21045120;23111157;23572148;23776212;27862469;28011693", "class_list": "", "function": "Required during eoplast (a highly reduced plastid type present during the degreening and dehydration stages of seed maturation) development in embryos and early stages of eoplast redifferentiation during seedling growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWY6;Q940C8;Q9CAE6", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane;GO:0031972 chloroplast intermembrane space", "go_biological_process": "GO:0009657 plastid organization;GO:0010431 seed maturation;GO:0090677 reversible differentiation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4J3R7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J3T8-1", "uniprot_id": "MYTM1_ARATH", "mass": 93378.0, "length": 840, "protein_name": "Phosphatidylinositol-3-phosphatase myotubularin-1", "gene_name": "MTM1", "organism": "Arabidopsis", "refseq_name": "Myotubularin-like phosphatases II superfamily", "refseq_ac": "NP_187666", "gene_names_uniprotkb": "MTM1; F13M14.17; F18K10.13", "gene_names_refseq": "Arabidopsis thaliana myotubularin 1; AtMTM1; MTM1; myotubularin 1", "protein_names_uniprotkb": "Phosphatidylinositol-3-phosphatase myotubularin-1; 3.1.3.64; 3.1.3.95; AtMTM1; Phosphatidylinositol-3,5-bisphosphate 3-phosphatase; Phosphatidylinositol-3-phosphate phosphatase", "protein_names_refseq": "Myotubularin-like phosphatases II superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10550)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;12068129;14593172;18201690;19901554;20967218;22324391;25561503;27862469", "class_list": "", "function": "Phosphatase with phosphoinositide 3'-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P); participates in pathway(s) that transfer gene regulatory signals to the nucleus. Required for recovery after water deprivation, via the accumulation of PtdIns5P upon dehydration; high PtdIns5P levels mediate ATX1 cytoplasmic localization, thus down-regulating the expression of ATX1-dependent genes. Confers sensitivity to soil-water-deficit stress., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84W79;Q9CAF1;Q9LPP2", "ec_number_list": "3.1.3.64;3.1.3.95", "go_molecular_function": "GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity;GO:0004721 phosphoprotein phosphatase activity;GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity;GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0031410 cytoplasmic vesicle;GO:0010008 endosome membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0042631 cellular response to water deprivation;GO:0046856 phosphatidylinositol dephosphorylation;GO:2000070 regulation of response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4J3T8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J8G7-1", "uniprot_id": "VIR_ARATH", "mass": 234225.0, "length": 2138, "protein_name": "Protein virilizer homolog", "gene_name": "VIR", "organism": "Arabidopsis", "refseq_name": "embryo defective 2016", "refseq_ac": "NP_001319481", "gene_names_uniprotkb": "VIR; EMB2016; F18C1.5", "gene_names_refseq": "EMB2016; F18C1.5; F18C1_5; embryo defective 2016", "protein_names_uniprotkb": "Protein virilizer homolog; Protein EMBRYO DEFECTIVE 2016", "protein_names_refseq": "embryo defective 2016", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;15266054;25561503;27862469;28154133;28503769", "class_list": "", "function": "Subunit of the N6-methyltransferase complex, a multiprotein complex that mediates N6-methyladenosine (m6A) methylation at the 5'-[AG]GAC-3' consensus sites of some mRNAs (PubMed:28503769). Associates with MTA, MTB, FIP37 and HAKAI to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769). N6-methyladenosine (m6A) plays a role in mRNA stability, processing, translation efficiency and editing (PubMed:28503769)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 9, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 9, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 9, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "F4J8G6;Q9M9X3", "ec_number_list": "", "go_molecular_function": "GO:0008174 mRNA methyltransferase activity", "go_cellular_component": "GO:0036396 RNA N6-methyladenosine methyltransferase complex;GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0009651 response to salt stress;GO:0001510 RNA methylation;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "F4J8G7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4J9M5-1", "uniprot_id": "CHR12_ARATH", "mass": 126735.0, "length": 1102, "protein_name": "Probable ATP-dependent DNA helicase CHR12", "gene_name": "CHR12", "organism": "Arabidopsis", "refseq_name": "SNF2/Brahma-type chromatin-remodeling protein CHR12", "refseq_ac": "NP_187252", "gene_names_uniprotkb": "CHR12; F2O10.3; MINU1", "gene_names_refseq": "ATCHR12; CHR12; F2O10.3; F2O10_3; chromatin remodeling 12", "protein_names_uniprotkb": "Probable ATP-dependent DNA helicase CHR12; 3.6.4.12; AtCHR12; Protein CHROMATIN REMODELING 12; Protein MINUSCULE 1", "protein_names_refseq": "SNF2/Brahma-type chromatin-remodeling protein CHR12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06010)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130713;16547115;17605754;18463617;20466843;21768351;23062007;23111157;23776212;24265739;24839909;25561503;26187819;27862469;29654922;30833711", "class_list": "", "function": "Probable chromatin-remodeling factor that is functionally redundant with CHR23 in root and shoot stem cell initiation, and root apical meristem (RAM) and shoot apical meristem (SAM) maintenance. Plays an important role in mediating the temporary plant growth arrest induced upon perception of stress (PubMed:17605754, PubMed:23062007). May promote seed maturation and repress initiation of germination (PubMed:24839909)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SFG5", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009408 response to heat;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "F4J9M5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JAU3-1", "uniprot_id": "P4H2_ARATH", "mass": 33019.0, "length": 299, "protein_name": "Prolyl 4-hydroxylase 2", "gene_name": "P4H2", "organism": "Arabidopsis", "refseq_name": "P4H isoform 2", "refseq_ac": "NP_566279", "gene_names_uniprotkb": "P4H2; F24P17.24", "gene_names_refseq": "AT-P4H-2; F24P17.24; F24P17_24; P4H isoform 2; P4H2; PROLYL 4-HYDROXYLASE; prolyl 4-hydroxylase 2", "protein_names_uniprotkb": "Prolyl 4-hydroxylase 2; 1.14.11.2; AtP4H-2; AtP4H2", "protein_names_refseq": "P4H isoform 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06300)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;15528200;21680836;27862469", "class_list": "", "function": "Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins. Has low affinity for the substrates tested in vitro., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q0WP28;Q8L8T9;Q9SQT3", "ec_number_list": "1.14.11.2", "go_molecular_function": "GO:0005506 iron ion binding;GO:0031418 L-ascorbic acid binding;GO:0004656 procollagen-proline 4-dioxygenase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005768 endosome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0080147 root hair cell development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JAU3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JBX1-1", "uniprot_id": "RGF10_ARATH", "mass": 16484.0, "length": 143, "protein_name": "Root meristem growth factor 10", "gene_name": "RGF10", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_001319807", "gene_names_uniprotkb": "RGF10; CLELn; T4C21.60", "gene_names_refseq": "", "protein_names_uniprotkb": "Root meristem growth factor 10; AtCLELn; AtRGF10; CLAVATA3/ESR (CLE)-related protein CLELn; Nuclear CLE-Like protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60650)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;22815541;27001831;27862469", "class_list": "", "function": "Maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT), mainly at the post-transcriptional level (By similarity). Promotes root elongation (PubMed:22815541)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZZ8", "ec_number_list": "", "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus", "go_biological_process": "GO:0030154 cell differentiation;GO:0009733 response to auxin;GO:0048527 lateral root development;GO:2000067 regulation of root morphogenesis;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JBX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JCB2-1", "uniprot_id": "CPL5_ARATH", "mass": 69150.0, "length": 601, "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 5", "gene_name": "CPL5", "organism": "Arabidopsis", "refseq_name": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "refseq_ac": "NP_001118664", "gene_names_uniprotkb": "CPL5; MMB12.6; MMB12.7", "gene_names_refseq": "", "protein_names_uniprotkb": "RNA polymerase II C-terminal domain phosphatase-like 5; 3.1.3.16; AtCPL5; CTD phosphatase-like 5; Carboxyl-terminal phosphatase-like 5; FCP-like 5", "protein_names_refseq": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19595); (ath:AT3G19600)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "10907853;21231936;27862469", "class_list": "", "function": "Mediates the dephosphorylation of 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Positively regulates abscisic acid (ABA) and drought responses, including the regulation of specific genes expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0LW35;Q9LJN6;Q9LJN7", "ec_number_list": "3.1.3.16;3.1.3.27;3.1.3.48;2.7.11.1;2.7.13.3", "go_molecular_function": "GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0009414 response to water deprivation;GO:1902074 response to salt;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4JCB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JCN9-1", "uniprot_id": "PRE4_ARATH", "mass": 10360.0, "length": 92, "protein_name": "Transcription factor PRE4", "gene_name": "PRE4", "organism": "Arabidopsis", "refseq_name": "BANQUO 3", "refseq_ac": "NP_190355", "gene_names_uniprotkb": "PRE4; BHLH161; BNQ3; T23J7.40", "gene_names_refseq": "BANQUO 3; BASIC HELIX-LOOP-HELIX PROTEIN 161; BHLH161; BNQ3", "protein_names_uniprotkb": "Transcription factor PRE4; AtbHLH161; Basic helix-loop-helix protein 161; Protein BANQUO 3; Protein PACLOBUTRAZOL RESISTANCE 4; bHLH 161; bHLH transcription factor bHLH161", "protein_names_refseq": "BANQUO 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47710)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14600211;16527868;20305124;23161888;27862469", "class_list": "", "function": "Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. Regulates light responses by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. May have a regulatory role in various aspects of gibberellin-dependent growth and development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STU2", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0040008 regulation of growth;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009640 photomorphogenesis;GO:0048510 regulation of timing of transition from vegetative to reproductive phase", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JCN9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JEI8-1", "uniprot_id": "NAP1D_ARATH", "mass": 36418.0, "length": 317, "protein_name": "4; Nucleosome assembly protein 1", "gene_name": "4; NAP1", "organism": "Arabidopsis", "refseq_name": "nucleosome assembly protein1;4", "refseq_ac": "NP_001319544", "gene_names_uniprotkb": "4; NAP1; MMM17.22; NFA4", "gene_names_refseq": "4; NAP1; NFA04; NFA4; NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 04; NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 4; nucleosome assembly protein1", "protein_names_uniprotkb": "4; Nucleosome assembly protein 1; 4; AtNAP1; Nucleosome/chromatin assembly factor group A4", "protein_names_refseq": "4; nucleosome assembly protein1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13782)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10907853;19228338;27862469", "class_list": "", "function": "May modulate chromatin structure by regulation of nucleosome assembly/disassembly., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LIC0", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000785 chromatin", "go_biological_process": "GO:0006334 nucleosome assembly;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4JEI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JF14-1", "uniprot_id": "ENOL1_ARATH", "mass": 104853.0, "length": 953, "protein_name": "Protein ENHANCER OF LHP1 1", "gene_name": "EOL1", "organism": "Arabidopsis", "refseq_name": "transducin family protein / WD-40 repeat family protein", "refseq_ac": "NP_189852", "gene_names_uniprotkb": "EOL1; T12K4_110", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein ENHANCER OF LHP1 1", "protein_names_refseq": "transducin family protein / WD-40 repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G42660)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;20466843;23776212;25561503;27862469;28428341;29654922", "class_list": "", "function": "Participates in maintaining the H3K27me3 mark at target genes by interacting with LHP1-PRC2 complexes during replication, thus contributing to H3K27me3 inheritance., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9M298", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0043596 nuclear replication fork;GO:0005634 nucleus", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0006281 DNA repair;GO:0040029 epigenetic regulation of gene expression;GO:0006261 DNA-templated DNA replication;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JF14-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JFU8-1", "uniprot_id": "OBL1_ARATH", "mass": 59607.0, "length": 518, "protein_name": "Triacylglycerol lipase OBL1", "gene_name": "OBL1", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": "NP_566484", "gene_names_uniprotkb": "OBL1", "gene_names_refseq": "", "protein_names_uniprotkb": "Triacylglycerol lipase OBL1; 3.1.1.-; AtOBL1; Oil body lipase 1", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14360)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10819329;14593172;27862469;29178188", "class_list": "", "function": "Acid lipase that can hydrolyze a range of triacylglycerols without a clear preference for acyl-chains (PubMed:29178188). Can also cleave 1,2-diacylglycerol, 1,3-diacylglycerol and 1-monoacylglycerol, but not phosphatidylcholine, phosphatidylethanolamine, or sterol esters (PubMed:29178188). Required for pollen tube growth (PubMed:29178188). Triacylglycerol hydrolysis by OBL1 may provide acyl groups for the synthesis of membrane lipids in growing pollen tubes (Probable)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178V8G3;Q8H1D5;Q93ZZ5;Q9LUL3", "ec_number_list": "3.1.1.-", "go_molecular_function": "GO:0047372 monoacylglycerol lipase activity;GO:0004806 triacylglycerol lipase activity;GO:0120516 diacylglycerol lipase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005811 lipid droplet;GO:0016020 membrane;GO:0090406 pollen tube", "go_biological_process": "GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JFU8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JGR5-1", "uniprot_id": "PFPB2_ARATH", "mass": 62742.0, "length": 569, "protein_name": "Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2", "gene_name": "PFP-BETA2", "organism": "Arabidopsis", "refseq_name": "Phosphofructokinase family protein", "refseq_ac": "NP_192313", "gene_names_uniprotkb": "PFP-BETA2; MEE51; T24H24.15", "gene_names_refseq": "MEE51; T24H24.15; T24H24_15; maternal effect embryo arrest 51", "protein_names_uniprotkb": "Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2; 2.7.1.90; 6-phosphofructokinase, pyrophosphate dependent 2; PFP 2; PPi-PFK 2; Protein MATERNAL EFFECT EMBRYO ARREST 51; Pyrophosphate-dependent 6-phosphofructose-1-kinase 2", "protein_names_refseq": "Phosphofructokinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04040)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;15501181;19376835;19533038;27862469", "class_list": "", "function": "Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81437", "ec_number_list": "2.7.1.90", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003872 6-phosphofructokinase activity;GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0009749 response to glucose;GO:0006002 fructose 6-phosphate metabolic process;GO:0009793 embryo development ending in seed dormancy;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JGR5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JHH5-1", "uniprot_id": "SC15B_ARATH", "mass": 88371.0, "length": 787, "protein_name": "Exocyst complex component SEC15B", "gene_name": "SEC15B", "organism": "Arabidopsis", "refseq_name": "exocyst complex component sec15B", "refseq_ac": "NP_001319844", "gene_names_uniprotkb": "SEC15B; T14P8.16", "gene_names_refseq": "SEC15B; T14P8.16; T14P8_16; exocyst complex component sec15B", "protein_names_uniprotkb": "Exocyst complex component SEC15B; AtSec15b", "protein_names_refseq": "exocyst complex component sec15B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02350)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;18492870;19895414;20870962;21199889;23111157;24307681;25561503;27862469;30833711;35249253", "class_list": "", "function": "Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81298", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0070062 extracellular exosome;GO:0000145 exocyst;GO:0009506 plasmodesma", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006887 exocytosis;GO:0006893 Golgi to plasma membrane transport;GO:0090522 vesicle tethering involved in exocytosis;GO:0009846 pollen germination", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4JHH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JI72-1", "uniprot_id": "F4JI72_ARATH", "mass": 56824.0, "length": 507, "protein_name": "Homeodomain-like superfamily protein", "gene_name": "F4C21.18; F4C21_18", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "F4C21.18; F4C21_18", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeodomain-like superfamily protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G03250)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;25561503;27862469;29654922", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JI72-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JJL3-1", "uniprot_id": "ENDO5_ARATH", "mass": 33610.0, "length": 296, "protein_name": "Endonuclease 5", "gene_name": "ENDO5", "organism": "Arabidopsis", "refseq_name": "endonuclease 5", "refseq_ac": "NP_567631", "gene_names_uniprotkb": "ENDO5; F17L22.60; F18E5.220", "gene_names_refseq": "ENDO5; F17L22.60; endonuclease 5", "protein_names_uniprotkb": "Endonuclease 5; 3.1.30.1; AtENDO5; Deoxyribonuclease ENDO5; Single-stranded-nucleate endonuclease ENDO5", "protein_names_refseq": "endonuclease 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21600)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;17651368;23620482;27862469", "class_list": "", "function": "Hydrolyzes, with low efficiency, only single-stranded DNA and RNA without apparent specificity for bases (PubMed:17651368, PubMed:23620482). Endonuclease that recognizes and cleaves some mismatches with high efficiency, including heteroduplex double-stranded DNA; mostly efficient on T/G, A/G and G/G mismatches, less efficient for T/T and poorly efficient for C/C, A/A, T/C and A/C (PubMed:17651368)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 4, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O65425;Q8LA68", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004519 endonuclease activity;GO:0004521 RNA endonuclease activity;GO:0000014 single-stranded DNA endodeoxyribonuclease activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006308 DNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JJL3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JKB6-1", "uniprot_id": "PRRP3_ARATH", "mass": 64396.0, "length": 576, "protein_name": "Proteinaceous RNase P 3", "gene_name": "PRORP3", "organism": "Arabidopsis", "refseq_name": "proteinaceous RNase P 3", "refseq_ac": "NP_193921", "gene_names_uniprotkb": "PRORP3; T8O5.110", "gene_names_refseq": "PRORP3; T8O5.110; T8O5_110; proteinaceous RNase P 3", "protein_names_uniprotkb": "Proteinaceous RNase P 3; 3.1.26.5", "protein_names_refseq": "proteinaceous RNase P 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21900)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;20473316;22549728;27862469", "class_list": "", "function": "Endonuclease RNase P responsible for the 5' maturation of tRNA precursors. Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49713;Q0WKW9;Q0WVS1", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0004526 ribonuclease P activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0001682 tRNA 5'-leader removal;GO:0043144 sno(s)RNA processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JKB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JKH6-1", "uniprot_id": "REC2_ARATH", "mass": 199116.0, "length": 1819, "protein_name": "Protein REDUCED CHLOROPLAST COVERAGE 2", "gene_name": "REC2", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": "NP_194537", "gene_names_uniprotkb": "REC2; T13J8.190; TSS", "gene_names_refseq": "T13J8.190; T13J8_190", "protein_names_uniprotkb": "Protein REDUCED CHLOROPLAST COVERAGE 2; Protein TPR-domain suppressor of STIMPY", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28080)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10617198;18463617;19245862;19376835;20466843;20733066;21185286;21768351;22060019;23111157;23172892;23572148;23660473;23776212;24043427;24601666;24924143;25561503;26091701;26862170;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Negatively regulates meristematic tissue proliferation by integrating developmental signals with carbon source availability (PubMed:21185286). May act as the scaffold of a protein complex, which sequesters key factors that are required for the G2 to M transition in meristematic tissues (PubMed:21185286). Together with REC2, REC3 and FMT/CLU, contributes to the establishment of the cellular volume devoted to the chloroplast compartment (PubMed:26862170)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 65, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SUD1", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0019750 chloroplast localization", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4JKH6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JKK0-1", "uniprot_id": "SUD1_ARATH", "mass": 123004.0, "length": 1108, "protein_name": "Probable E3 ubiquitin ligase SUD1", "gene_name": "SUD1", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_001119113", "gene_names_uniprotkb": "SUD1; CER9; F28A23.140", "gene_names_refseq": "CER9; ECERIFERUM 9; F28A23.140; F28A23_140; SUD1; SUPPRESSOR OF DRY2 DEFECTS 1", "protein_names_uniprotkb": "Probable E3 ubiquitin ligase SUD1; 2.3.2.27; AtSUD1; Protein ECERIFERUM 9; Protein SUPPRESSOR OF DRY2 DEFFECTS 1; RING-type E3 ubiquitin transferase SUD1; RING/U-box domain-containing protein", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34100)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;22635115;23404890;27862469", "class_list": "", "function": "Probable E3 ubiquitin ligase acting as a positive post-transcriptional regulator of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity. Might be involved in the quality control that degrades misfolded proteins (By similarity)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JKK1;O49494;Q0WLP2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0042335 cuticle development;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0009414 response to water deprivation;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JKK0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JL11-1", "uniprot_id": "IMPA2_ARATH", "mass": 58907.0, "length": 535, "protein_name": "Importin subunit alpha-2", "gene_name": "IMPA2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "IMPA2", "gene_names_refseq": "", "protein_names_uniprotkb": "Importin subunit alpha-2; IMPa-2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16143)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;14593172;18463617;18836040;20466843;23328941;23572148;23582042;23776212;25561503;27862469;30833711;37676567", "class_list": "", "function": "Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (PubMed:37676567). Involved in the maintenance of cell wall integrity under salt stress via interaction with SWO1 (PubMed:37676567). Acts as a cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49600;Q9ASV4", "ec_number_list": "", "go_molecular_function": "GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0009651 response to salt stress;GO:0006607 NLS-bearing protein import into nucleus;GO:0071555 cell wall organization;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4JL11-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JL28-1", "uniprot_id": "EBS_ARATH", "mass": 26566.0, "length": 234, "protein_name": "Chromatin remodeling protein EBS", "gene_name": "EBS", "organism": "Arabidopsis", "refseq_name": "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein", "refseq_ac": "NP_001031695", "gene_names_uniprotkb": "EBS; F1N20.240", "gene_names_refseq": "EARLY BOLTING IN SHORT DAYS; EBS; F1N20.240; F1N20_240", "protein_names_uniprotkb": "Chromatin remodeling protein EBS; Protein EARLY BOLTING IN SHORT DAYS", "protein_names_refseq": "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22140)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;11340178;12837946;14593172;18463617;19245862;19376835;20466843;23111157;23572148;23776212;25281686;25561503;26091701;27862469;28011693;30833711", "class_list": "", "function": "Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulating the transcription of target genes (PubMed:25281686). Negative regulator in developmental processes in a gibberellic acid- (GA-) dependent manner, such as germination, flowering induction, and flower organ specification, probably by modulating developmental gene expression (PubMed:11340178, PubMed:25281686). Involved in the chromatin-mediated repression of floral initiation and controls genes regulating flowering (PubMed:25281686). Negatively regulates the expression of the floral integrator FT epigenetically, by preventing high levels of H3 acetylation, thus maintaining an inactive chromatin conformation at FT locus (PubMed:12837946, PubMed:25281686)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65462;Q56W44;Q8H1R5", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0140678 molecular function inhibitor activity;GO:0140002 histone H3K4me3 reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009791 post-embryonic development;GO:0045814 negative regulation of gene expression, epigenetic;GO:2000028 regulation of photoperiodism, flowering;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "F4JL28-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JLC1-1", "uniprot_id": "MRL7_ARATH", "mass": 38241.0, "length": 331, "protein_name": "Thioredoxin-like fold domain-containing protein MRL7, chloroplastic", "gene_name": "MRL7", "organism": "Arabidopsis", "refseq_name": "polyadenylate-binding protein 2-binding protein", "refseq_ac": "NP_194588", "gene_names_uniprotkb": "MRL7; ECB1; RCB; SVR4", "gene_names_refseq": "AtECB1; ECB1; MRL7; Mesophyll-cell RNAi Library line 7; SUPPRESSOR OF VARIEGATION 4; SVR4; T5F17.40; T5F17_40; early chloroplast biogenesis 1", "protein_names_uniprotkb": "Thioredoxin-like fold domain-containing protein MRL7, chloroplastic; AtECB1; AtMRL7; Protein EARLY CHLOROPLAST BIOGENESIS 1; Protein MESOPHYLL-CELL RNAI LIBRARY LINE 7; Protein REGULATOR OF CHLOROPLAST BIOGENESIS; Protein SUPPRESSOR OF VARIEGATION 4", "protein_names_refseq": "polyadenylate-binding protein 2-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28590)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;21220584;21515910;23956074;24111559;24132784;27862469;31201314;33824329", "class_list": "", "function": "Plays an essential role in early steps of chloroplast development (PubMed:21220584, PubMed:21515910, PubMed:23956074, PubMed:24111559, PubMed:33824329). Involved in the regulation of plastid gene expression (PubMed:21515910, PubMed:23956074, PubMed:24111559). May positively regulate plastid-encoded RNA polymerase (PEP) activity through binding to FSD3 and CITRX/TRXZ (PubMed:23956074). Involved in redox-mediated regulation of chloroplast development (PubMed:23956074, PubMed:24132784). Possesses disulfide reductase activity in vitro (PubMed:23956074). Required for the proper function of the plastid transcriptional machinery and protein accumulation in thylakoid membranes. May function as molecular chaperone to ensure proper organization of the nucleoids in chloroplasts (PubMed:24111559). May mediate some aspect of thylakoid structure or function that controls non-photochemical quenching (NPQ) (PubMed:21220584, PubMed:21515910, PubMed:23956074, PubMed:24111559, PubMed:24132784). Participates in the early light signaling events of photobody biogenesis in chloroplasts (PubMed:31201314). May mediate the degradation of two repressors of chloroplast biogenesis, PIF1 and PIF3 in nucleus (PubMed:31201314). Collaboratively with PTAC12/HMR/PAP5, involved in the regulation of thermoresponsive responses via the stabilization of PIF4 in the daytime to initiate thermomorphogenesis (PubMed:33824329)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67XP3;Q9M0H2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0009266 response to temperature stimulus;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JLC1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JLE5-1", "uniprot_id": "SFH1_ARATH", "mass": 63287.0, "length": 554, "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH1", "gene_name": "SFH1", "organism": "Arabidopsis", "refseq_name": "Sec14p-like phosphatidylinositol transfer family protein", "refseq_ac": "NP_001328041", "gene_names_uniprotkb": "SFH1; COW1; PITP1; SRH1; T4L20.160", "gene_names_refseq": "AtSFH1; CAN OF WORMS1; COW1; SHORT ROOT HAIR 1; SRH1; T4L20.160; T4L20_160", "protein_names_uniprotkb": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH1; AtPITP1; AtSFH1; Phosphatidylinositol transfer protein 1; Protein CAN OF WORMS1; Protein SEC FOURTEEN HOMOLOGS 1; Protein SHORT ROOT HAIR 1", "protein_names_refseq": "Sec14p-like phosphatidylinositol transfer family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34580)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;15546352;15728190;17051233;17335879;23456248;27862469;30833711;9390433", "class_list": "", "function": "Required for transport of secretory proteins from the Golgi complex (By similarity). Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Plays a role in root hair tip elongation as a key regulator of polarized membrane trafficking. May promote the PtdIns(4,5)P2 synthesis and organization in root hair membrane., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65682;Q708J3", "ec_number_list": "", "go_molecular_function": "GO:0008526 phosphatidylinositol transfer activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0035619 root hair tip", "go_biological_process": "GO:0015031 protein transport;GO:0006892 post-Golgi vesicle-mediated transport;GO:0009932 cell tip growth;GO:0010053 root epidermal cell differentiation;GO:0048767 root hair elongation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JLE5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JLP5-1", "uniprot_id": "PLPD2_ARATH", "mass": 60145.0, "length": 567, "protein_name": "Dihydrolipoyl dehydrogenase 2, chloroplastic", "gene_name": "LPD2", "organism": "Arabidopsis", "refseq_name": "dihydrolipoamide dehydrogenase", "refseq_ac": "NP_567487", "gene_names_uniprotkb": "LPD2; FCAALL.61", "gene_names_refseq": "", "protein_names_uniprotkb": "Dihydrolipoyl dehydrogenase 2, chloroplastic; 1.8.1.4; Dihydrolipoamide dehydrogenase 2; E3-2; PDC-E3 2; Protein LIPOAMIDE DEHYDROGENASE 2; Pyruvate dehydrogenase complex E3 subunit 2; ptLPD2", "protein_names_refseq": "dihydrolipoamide dehydrogenase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16155)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11056213;14593172;20488895;27862469;9461215", "class_list": "", "function": "Lipoamide dehydrogenase is a component of the plastidial pyruvate dehydrogenase complex (PDC)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M5K4", "ec_number_list": "1.8.1.4", "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0004148 dihydrolipoyl dehydrogenase (NADH) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0045252 oxoglutarate dehydrogenase complex;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0006103 2-oxoglutarate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JLP5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JLZ6-1", "uniprot_id": "SMO13_ARATH", "mass": 34284.0, "length": 291, "protein_name": "Methylsterol monooxygenase 1-3", "gene_name": "SMO1-3", "organism": "Arabidopsis", "refseq_name": "methylsterol monooxygenase 1-3", "refseq_ac": "NP_567669", "gene_names_uniprotkb": "SMO1-3; T12H17.140", "gene_names_refseq": "", "protein_names_uniprotkb": "Methylsterol monooxygenase 1-3; 1.14.18.11; 1.14.18.9; AtSMO1-3; Sterol 4-alpha-methyl-oxidase 1-3", "protein_names_refseq": "methylsterol monooxygenase 1-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22755)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14653780;27862469;29288621;31341004", "class_list": "", "function": "Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the first methyl group at the C-4 position (By similarity). 4,4-dimethyl-9-beta,19-cyclopropylsterols such as 24-methylenecycloartanol are the preferred substrates (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JLZ3;Q5J909", "ec_number_list": "1.14.18.9;1.14.18.11;1.14.18.10", "go_molecular_function": "GO:0000254 C-4 methylsterol oxidase activity;GO:0005506 iron ion binding;GO:0102177 24-methylenelophenol methyl oxidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016126 sterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JLZ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JN35-1", "uniprot_id": "NTL9_ARATH", "mass": 57250.0, "length": 512, "protein_name": "Protein NTM1-like 9", "gene_name": "NTL9", "organism": "Arabidopsis", "refseq_name": "NAC transcription factor-like 9", "refseq_ac": "NP_001119122", "gene_names_uniprotkb": "NTL9; CBNAC; F8D20.90; F8D20_90; calmodulin-binding NAC protein", "gene_names_refseq": "CBNAC; F8D20.90; F8D20_90; NAC transcription factor-like 9; NTL9; calmodulin-binding NAC protein", "protein_names_uniprotkb": "Protein NTM1-like 9; Calmodulin-binding NAC protein", "protein_names_refseq": "NAC transcription factor-like 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35580)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;14593172;15029955;17158162;17947243;18443413;21768351;22826500;23111157;24329768;25561503;27532006;27862469;28011693", "class_list": "", "function": "Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as a positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81790;Q93ZN0", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0005516 calmodulin binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:1900426 positive regulation of defense response to bacterium;GO:0071470 cellular response to osmotic stress", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "F4JN35-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JNX3-1", "uniprot_id": "CMKMT_ARATH", "mass": 34491.0, "length": 304, "protein_name": "Calmodulin-lysine N-methyltransferase", "gene_name": "CaMKMT", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": "NP_680769", "gene_names_uniprotkb": "CaMKMT; T19K4.120", "gene_names_refseq": "CaM KMT; calmodulin N-methyltransferase", "protein_names_uniprotkb": "Calmodulin-lysine N-methyltransferase; 2.1.1.60; CLNMT; CaM KMT", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35987)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;24260266;24285794;27862469", "class_list": "", "function": "Catalyzes the trimethylation of calmodulin (PubMed:24285794). Regulates roots development probably by modulating auxin signaling responses. May be involved in gravitropism. Involved in abscisic acid (ABA)-mediated and abiotic stress responses, including salt (NaCl), cold, drought and heat stresses (PubMed:24285794)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65636", "ec_number_list": "2.1.1.60", "go_molecular_function": "GO:0018025 calmodulin-lysine N-methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0009408 response to heat;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JNX3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JP36-1", "uniprot_id": "HAP2_ARATH", "mass": 80505.0, "length": 705, "protein_name": "Protein HAPLESS 2", "gene_name": "HAP2", "organism": "Arabidopsis", "refseq_name": "hapless 2", "refseq_ac": "NP_192909", "gene_names_uniprotkb": "HAP2; GCS1; T5C23", "gene_names_refseq": "GCS1; GENERATIVE CELL-SPECIFIC 1; HAP2; HAPLESS 2; T5C23.150; T5C23_150", "protein_names_uniprotkb": "Protein HAPLESS 2; GENERATIVE CELL SPECIFIC 1", "protein_names_refseq": "hapless 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11720)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;15514068;16378100;17079265;20080406;20333238;21209845;23180860;27862469;28137780;30102690", "class_list": "", "function": "Required for male fertility (PubMed:17079265, PubMed:20333238). Plays a role in pollen tube guidance and successful gamete attachment (PubMed:17079265). Essential for the fusion of gametes during double fertilization, where one male gamete fuses with the egg to produce a zygote, and another male gamete fuses with the central cell to produce the endosperm (PubMed:17079265, PubMed:20333238, PubMed:21209845). Mediates the fusion of cell membranes (PubMed:28137780). Not required for pollen tube outgrowth (PubMed:17079265, PubMed:20333238)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 2, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 2, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 2, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q1AP31;Q2PGG6;Q9T0D9", "ec_number_list": "", "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0045026 plasma membrane fusion;GO:0009567 double fertilization forming a zygote and endosperm;GO:0010183 pollen tube guidance;GO:0048235 pollen sperm cell differentiation;GO:0061936 fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F4JP36-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JRS4-1", "uniprot_id": "MORC7_ARATH", "mass": 79573.0, "length": 707, "protein_name": "Protein MICRORCHIDIA 7", "gene_name": "MORC7", "organism": "Arabidopsis", "refseq_name": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "refseq_ac": "NP_194227", "gene_names_uniprotkb": "MORC7; CRH3; F13M23.110", "gene_names_refseq": "F13M23.110; F13M23_110", "protein_names_uniprotkb": "Protein MICRORCHIDIA 7; 3.6.-.-; AtMORC7; CRT1-h3; Protein CRT1-homolog 3", "protein_names_refseq": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24970)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;19704828;23111157;24799676;27171361;27862469", "class_list": "", "function": "Exhibits ATPase activity. Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair. Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing. May also be involved in the regulation of chromatin architecture to maintain gene silencing. Together with MORC4, acts to suppress a wide set of non-methylated protein-coding genes, especially involved in pathogen response. Positive regulators of defense against the oomycete Hyaloperonospora arabidopsidis (Hpa) (PubMed:27171361)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SW29", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0016604 nuclear body", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006281 DNA repair;GO:0006282 regulation of DNA repair;GO:0060966 regulation of gene silencing by regulatory ncRNA;GO:0080188 gene silencing by siRNA-directed DNA methylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JRS4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JSH1-1", "uniprot_id": "APY7_ARATH", "mass": 81683.0, "length": 740, "protein_name": "Probable apyrase 7", "gene_name": "APY7", "organism": "Arabidopsis", "refseq_name": "GDA1/CD39 nucleoside phosphatase family protein", "refseq_ac": "NP_001329939", "gene_names_uniprotkb": "APY7; T18B16.150", "gene_names_refseq": "APY7; AtAPY7; T18B16.150; T18B16_150; apyrase 7", "protein_names_uniprotkb": "Probable apyrase 7; 3.6.1.5; ADPase; ATP-diphosphatase; ATP-diphosphohydrolase; Adenosine diphosphatase; AtAPY7; NTPDase; Nucleoside triphosphate diphosphohydrolase 7", "protein_names_refseq": "GDA1/CD39 nucleoside phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;18463617;20466843;23111157;25561503;27862469", "class_list": "", "function": "Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates (By similarity). Involved in the regulation of pollen and anther development., [UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "O49676", "ec_number_list": "3.6.1.5", "go_molecular_function": "GO:0005524 ATP binding;GO:0017110 nucleoside diphosphate phosphatase activity;GO:0004050 apyrase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "GO:0009134 nucleoside diphosphate catabolic process;GO:0009901 anther dehiscence;GO:0010584 pollen exine formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JSH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JT76-1", "uniprot_id": "VPS54_ARATH", "mass": 113865.0, "length": 1034, "protein_name": "Vacuolar protein sorting-associated protein 54, chloroplastic", "gene_name": "VPS54", "organism": "Arabidopsis", "refseq_name": "VPS54", "refseq_ac": "NP_193684", "gene_names_uniprotkb": "VPS54; F24J7.50", "gene_names_refseq": "ARABIDOPSIS THALIANA VPS54 HOMOLOG; ATVPS54; F24J7.50; F24J7_50; VPS54", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 54, chloroplastic; AtVPS54", "protein_names_refseq": "VPS54", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19490)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;15235115;18583349;21398432;22074104;23111157;23328941;23572148;23660473;23776212;23820729;24601666;25561503;26091701;27862469;29167316;29654922", "class_list": "", "function": "Acts as a component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Probably involved in pollen tube elongation and other polar growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49467;Q0WUR3", "ec_number_list": "", "go_molecular_function": "GO:0019905 syntaxin binding", "go_cellular_component": "GO:0000938 GARP complex;GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0015031 protein transport;GO:0042147 retrograde transport, endosome to Golgi;GO:0006896 Golgi to vacuole transport", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "F4JT76-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JTE7-1", "uniprot_id": "GPP1_ARATH", "mass": 33071.0, "length": 298, "protein_name": "(DL)-glycerol-3-phosphatase 1, mitochondrial", "gene_name": "GPP1", "organism": "Arabidopsis", "refseq_name": "glycerol-3-phosphatase 1", "refseq_ac": "NP_567731", "gene_names_uniprotkb": "GPP1; F14M19.120; PYRP3", "gene_names_refseq": "F14M19.120; F14M19_120; GPP1; glycerol-3-phosphatase 1", "protein_names_uniprotkb": "(DL)-glycerol-3-phosphatase 1, mitochondrial; 3.1.3.104; 3.1.3.21; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate phosphatase; ARPP phosphatase; AtGPP1; AtGpp1/PyrP3; Glycerol-1-phosphatase 1; Haloacid dehalogenase-like hydrolase domain-containing protein GPP1", "protein_names_refseq": "glycerol-3-phosphatase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25840)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11910074;14593172;17136424;27490826;27862469", "class_list": "", "function": "Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3-phosphate (PubMed:17136424). Can also dephosphorylate in vitro 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP (PubMed:27490826)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GW23;Q8L8P9;Q9SW01", "ec_number_list": "3.1.3.21;3.1.3.104;3.1.3.102", "go_molecular_function": "GO:0046872 metal ion binding;GO:0000121 sn-glycerol 1-phosphatase activity;GO:0043136 sn-glycerol 3-phosphatase activity;GO:0043726 5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0016311 dephosphorylation;GO:0006114 glycerol biosynthetic process;GO:0009231 riboflavin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JTE7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JTN2-1", "uniprot_id": "LAZ1_ARATH", "mass": 54711.0, "length": 485, "protein_name": "Protein LAZ1", "gene_name": "LAZ1", "organism": "Arabidopsis", "refseq_name": "organic solute transporter ostalpha protein (DUF300)", "refseq_ac": "NP_568039", "gene_names_uniprotkb": "LAZ1; F22I13.130", "gene_names_refseq": "F22I13.130; F22I13_130; LAZ1; LAZARUS 1", "protein_names_uniprotkb": "Protein LAZ1; Lazarus1", "protein_names_refseq": "organic solute transporter ostalpha protein (DUF300)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38360)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;20830211;23111157;23660473;27862469", "class_list": "", "function": "Required for programmed cell death (PCD) associated with hypersensitive response (HR). Involved both in the induction of EDS1/PAD4 mediated HR and in accelerated cell death in the acd11 mutant. Not required for HR induction elicited through pathways exclusively dependent on CC-NB-LRR resistance proteins., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94AJ4;Q9SVE9", "ec_number_list": "", "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0012505 endomembrane system;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0007033 vacuole organization;GO:0012501 programmed cell death;GO:0098876 vesicle-mediated transport to the plasma membrane;GO:1900458 negative regulation of brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JTN2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JTS8-1", "uniprot_id": "NOV_ARATH", "mass": 306349.0, "length": 2729, "protein_name": "Protein NO VEIN", "gene_name": "NOV", "organism": "Arabidopsis", "refseq_name": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "refseq_ac": "NP_193111", "gene_names_uniprotkb": "NOV; EMB2597; F18A5.130; F18A5.140", "gene_names_refseq": "EMB2597; EMBRYO DEFECTIVE 2597; F18A5.140; F18A5_140; NO VEIN; NOV", "protein_names_uniprotkb": "Protein NO VEIN; Protein EMBRYO DEFECTIVE 2597", "protein_names_refseq": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13750)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;15266054;19880797;20729639;27862469", "class_list": "", "function": "Essential protein required for cell fate determination during embryogenesis (PubMed:15266054). Mediates auxin-dependent coordinated cell-fate specification and patterning in embryos (e.g. cotyledon outgrowth and separation), shoots and roots (e.g. leaf vascular development, cellular patterning and stem cell maintenance in the meristems) (PubMed:19880797, PubMed:20729639). Required for provascular PIN1 expression and region-specific expression of PIN7 in leaf primordia, cell type-specific expression of PIN3, PIN4, and PIN7 in the root, and PIN2 polarity in the root cortex (PubMed:19880797, PubMed:20729639)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVN7;Q9SVN8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0001708 cell fate specification;GO:0019827 stem cell population maintenance;GO:0009793 embryo development ending in seed dormancy;GO:0009926 auxin polar transport;GO:0010305 leaf vascular tissue pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JTS8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JUI3-1", "uniprot_id": "BPC5_ARATH", "mass": 31776.0, "length": 283, "protein_name": "Protein BASIC PENTACYSTEINE5", "gene_name": "BPC5", "organism": "Arabidopsis", "refseq_name": "basic pentacysteine 5", "refseq_ac": "NP_001190957", "gene_names_uniprotkb": "BPC5; BPC5; F19H22.10", "gene_names_refseq": "ATBPC5; BBR/BPC5; BPC5; F19H22.10; F19H22_10; basic pentacysteine 5", "protein_names_uniprotkb": "Protein BASIC PENTACYSTEINE5; AtBPC5; GAGA-motif binding transcriptional activator BBR/BPC5", "protein_names_refseq": "basic pentacysteine 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38910)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;12795701;14731261;14993207;27862469", "class_list": "", "function": "Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E6Y2M5;E6Y2M6;F4JUI4;Q9SVK1", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JUI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JVH1-1", "uniprot_id": "CFM3B_ARATH", "mass": 102031.0, "length": 907, "protein_name": "CRM-domain containing factor CFM3B, chloroplastic", "gene_name": "CFM3B", "organism": "Arabidopsis", "refseq_name": "CRM family member 3B", "refseq_ac": "NP_193187", "gene_names_uniprotkb": "CFM3B; SPRT2; dl3295c", "gene_names_refseq": "ATCFM3B; CFM3B; CRM family member 3B; DL3295C; FCAALL.243", "protein_names_uniprotkb": "CRM-domain containing factor CFM3B, chloroplastic; AtCFM3b; Protein CRM FAMILY MEMBER 3B; Protein SUPPRESSOR OF RFC THREE 2", "protein_names_refseq": "CRM family member 3B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14510)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;18799595;27862469;32143506;9461215", "class_list": "", "function": "Binds specific group II introns in chloroplasts and facilitates their splicing (PubMed:18799595, PubMed:32143506). Exhibits non-specific action during plastid rRNA biogenesis; RFC3 prevents unaccurate splicing to improve the accuracy of plastid rRNA processing (PubMed:32143506). Acts on subgroup IIB introns (PubMed:18799595). The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3B and CAF1 or CAF2 (PubMed:18799595). Required for seed development (PubMed:18799595)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23307", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0006364 rRNA processing;GO:0000373 Group II intron splicing;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JVH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JVI3-1", "uniprot_id": "MTEF5_ARATH", "mass": 55961.0, "length": 493, "protein_name": "Transcription termination factor MTERF5, chloroplastic", "gene_name": "MTERF5", "organism": "Arabidopsis", "refseq_name": "Mitochondrial transcription termination factor family protein", "refseq_ac": "NP_001327961", "gene_names_uniprotkb": "MTERF5; MDA1", "gene_names_refseq": "MDA1; MTERF DEFECTIVE IN Arabidopsis1", "protein_names_uniprotkb": "Transcription termination factor MTERF5, chloroplastic; Mitochondrial transcription termination factor 5; Protein MTERF DEFECTIVE IN ARABIDOPSIS 1; mTERF5", "protein_names_refseq": "Mitochondrial transcription termination factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14605)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;21464319;22905186;23087700;27862469;31128276;9461215", "class_list": "", "function": "Transcription termination factor required for processing and steady-state levels of plastid transcripts (PubMed:22905186). Involved also in chloroplast transcriptional pausing, a general feature of chloroplast genes (PubMed:31128276). Specifically and positively regulates the transcription of chloroplast psbEFLJ encoding for photosystem II (PSII) core subunits psbE, psbF, psbL and psbJ; causes the plastid-encoded RNA polymerase (PEP) complex to pause at psbEFLJ by binding to the +30 to +51 region of double-stranded DNA, and recruits additional pTAC6 to the transcriptionally paused region of psbEFLJ (PubMed:31128276). May play a role in response to abiotic stresses (PubMed:22905186)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006355 regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0006353 DNA-templated transcription termination;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JVI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JVN6-1", "uniprot_id": "TPPII_ARATH", "mass": 152368.0, "length": 1380, "protein_name": "Tripeptidyl-peptidase 2", "gene_name": "TPP2", "organism": "Arabidopsis", "refseq_name": "tripeptidyl peptidase ii", "refseq_ac": "NP_193817", "gene_names_uniprotkb": "TPP2; T13K14.10", "gene_names_refseq": "T13K14.10; T13K14_10; TPP2; tripeptidyl peptidase ii", "protein_names_uniprotkb": "Tripeptidyl-peptidase 2; 3.4.14.10; TPPII; Tripeptidyl-peptidase II", "protein_names_refseq": "tripeptidyl peptidase ii", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20850)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;15908606;19822524;25561503;27862469", "class_list": "", "function": "Serine protease of the proteasome pathway that may function with the 20S proteasome to degrade oxidized proteins generated by environmental stress., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L640;Q9SUC7", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding;GO:0004252 serine-type endopeptidase activity;GO:0008240 tripeptidyl-peptidase activity;GO:0004177 aminopeptidase activity;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0005773 vacuole;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4JVN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JWB3-1", "uniprot_id": "MYTM2_ARATH", "mass": 92588.0, "length": 833, "protein_name": "Phosphatidylinositol-3-phosphatase myotubularin-2", "gene_name": "MTM2", "organism": "Arabidopsis", "refseq_name": "Myotubularin-like phosphatases II superfamily", "refseq_ac": "NP_196074", "gene_names_uniprotkb": "MTM2; T32M21.150", "gene_names_refseq": "AtMTM2; MTM2; T32M21.150; T32M21_150; myotubularin 2", "protein_names_uniprotkb": "Phosphatidylinositol-3-phosphatase myotubularin-2; 3.1.3.64; 3.1.3.95; AtMTM2; Phosphatidylinositol-3,5-bisphosphate 3-phosphatase; Phosphatidylinositol-3-phosphate phosphatase", "protein_names_refseq": "Myotubularin-like phosphatases II superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04540)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12068129;18201690;19901554;22074104;22324391;27862469", "class_list": "", "function": "Phosphatase with phosphoinositide 3'-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P); participates in pathway(s) that transfer gene regulatory signals to the nucleus., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WP53;Q9LZ70", "ec_number_list": "3.1.3.64;3.1.3.95", "go_molecular_function": "GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity;GO:0004721 phosphoprotein phosphatase activity;GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity;GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046856 phosphatidylinositol dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JWB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JY12-1", "uniprot_id": "GFS12_ARATH", "mass": 183399.0, "length": 1639, "protein_name": "Protein GFS12", "gene_name": "GFS12", "organism": "Arabidopsis", "refseq_name": "protein serine/threonine kinase", "refseq_ac": "NP_974804", "gene_names_uniprotkb": "GFS12; BCHD; T28N17.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein GFS12; 2.7.10.-; BEACH domain-containing protein D; BEACH-domain homolog D; GREEN FLUORESCENT SEED 12", "protein_names_refseq": "protein serine/threonine kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18525)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;19392685;23328941;25561503;25618824;27862469;30833711", "class_list": "", "function": "May act predominantly to suppress BCHC1, which itself is a negative factor in protein storage vacuole (PSV) trafficking regulation and plant effector triggered immunity (ETI). Required for ETI, but not for cell death., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B5B8Z0;Q8VZH9", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005769 early endosome;GO:0005770 late endosome;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0042742 defense response to bacterium;GO:2000643 positive regulation of early endosome to late endosome transport;GO:0006623 protein targeting to vacuole", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JY12-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JY24-1", "uniprot_id": "CHR17_ARATH", "mass": 123888.0, "length": 1069, "protein_name": "ISWI chromatin-remodeling complex ATPase CHR17", "gene_name": "CHR17", "organism": "Arabidopsis", "refseq_name": "chromatin remodeling factor17", "refseq_ac": "NP_568365", "gene_names_uniprotkb": "CHR17; T1A4.2; chromatin remodeling factor17", "gene_names_refseq": "CHR17; T1A4.2; chromatin remodeling factor17", "protein_names_uniprotkb": "ISWI chromatin-remodeling complex ATPase CHR17; 3.6.4.-; Protein CHROMATIN REMODELING 17", "protein_names_refseq": "chromatin remodeling factor17", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18620)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;14593172;18463617;20466843;22694359;23776212;24606212;25561503;26187819;27680998;27862469;30833711", "class_list": "", "function": "Possesses intrinsic ATP-dependent nucleosome-remodeling activity. Constitutes the catalytic subunit of several complexes capable of forming ordered nucleosome arrays on chromatin (By similarity). Involved in the formation of nucleosome distribution patterns (PubMed:24606212). Required for the maintenance of the plant vegetative phase. In association with RLT1 or RLT2 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (PubMed:22694359). Necessary to acquire heat stress (HS) memory (PubMed:27680998)., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94C61", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0031491 nucleosome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0031010 ISWI-type complex;GO:0009536 plastid", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0031507 heterochromatin formation;GO:1900036 positive regulation of cellular response to heat;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4JY24-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JY37-1", "uniprot_id": "RUK_ARATH", "mass": 152283.0, "length": 1366, "protein_name": "Serine/threonine-protein kinase RUNKEL", "gene_name": "RUK", "organism": "Arabidopsis", "refseq_name": "kinase family with ARM repeat domain-containing protein", "refseq_ac": "NP_197371", "gene_names_uniprotkb": "RUK; EMB3013; T1A4.80", "gene_names_refseq": "EMB3013; EMBRYO DEFECTIVE 3013; RUK; RUNKEL; T1A4.80; T1A4_80", "protein_names_uniprotkb": "Serine/threonine-protein kinase RUNKEL; 2.7.11.1; Protein EMBRYO DEFECTIVE 3013; Protein RUNKEL", "protein_names_refseq": "kinase family with ARM repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18700)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11089872;11130714;12421698;19268593;23451828;25561503;27862469;30833711", "class_list": "", "function": "Essential protein that regulates phragmoplast microtubule organization during cell plate expansion in cytokinesis during cell division, both somatic and syncytial (PubMed:11089872, PubMed:19268593, PubMed:23451828). Required for endosperm cellularization (PubMed:12421698, PubMed:23451828). In pollen development, involved in cellularization during microsporogenesis by regulating radial microtubules (MT) organization in microspore mother cells (PubMed:23451828). Does not seem to have kinase activity (PubMed:19268593)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016740 transferase activity", "go_cellular_component": "GO:0005819 spindle;GO:0005874 microtubule;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0009524 phragmoplast", "go_biological_process": "GO:0007349 cellularization;GO:0000911 cytokinesis by cell plate formation;GO:0000914 phragmoplast assembly;GO:0009555 pollen development;GO:0009556 microsporogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JY37-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JYE9-1", "uniprot_id": "DHFS_ARATH", "mass": 56904.0, "length": 530, "protein_name": "Dihydrofolate synthetase", "gene_name": "DHFS", "organism": "Arabidopsis", "refseq_name": "Folylpolyglutamate synthetase family protein", "refseq_ac": "NP_198963", "gene_names_uniprotkb": "DHFS; DFA; GLA1", "gene_names_refseq": "A. THALIANA DHFS-FPGS HOMOLOG A; ATDFA; DFA; DHFS-FPGS HOMOLOG A; EMB9; EMBRYO DEFECTIVE 9; GLA1; GLOBULAR ARREST1; MYC6.18; MYC6_18", "protein_names_uniprotkb": "Dihydrofolate synthetase; 6.3.2.12; AtDFA; Protein GLOBULAR ARREST 1", "protein_names_refseq": "Folylpolyglutamate synthetase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41480)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11752472;12535338;14593172;27862469;9405937", "class_list": "", "function": "Conversion of folates to polyglutamate derivatives, including tetrahydrofolate (PubMed:11752472, PubMed:12535338). Required during embryogenesis; from maternal tissues until the globular stage, and from the embryo after the globular stage (PubMed:12535338)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7Y203;Q8W041;Q9FN53", "ec_number_list": "6.3.2.12", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004326 tetrahydrofolylpolyglutamate synthase activity;GO:0008841 dihydrofolate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0046654 tetrahydrofolate biosynthetic process;GO:0006730 one-carbon metabolic process;GO:0009396 folic acid-containing compound biosynthetic process;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4JYE9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JYG0-1", "uniprot_id": "PIAL2_ARATH", "mass": 83109.0, "length": 760, "protein_name": "E4 SUMO-protein ligase PIAL2", "gene_name": "PIAL2", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_198973", "gene_names_uniprotkb": "PIAL2; MBK23.10", "gene_names_refseq": "MBK23.10; MBK23_10; PIAL2; PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 2", "protein_names_uniprotkb": "E4 SUMO-protein ligase PIAL2; 2.3.2.-; Protein INHIBITOR OF ACTIVATED STAT-LIKE 2", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41580)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "25415977;26091701;27113777;27862469;28154133;9330910", "class_list": "", "function": "Together with MOM1 and PIAL1, regulates transcriptional gene silencing (TGS) independently of changes in DNA methylation (PubMed:27113777). E4-type SUMO ligase that promotes SUMO chain formation in a SCE1-dependent manner and thus contributes to a pathway for proteolytic removal of sumoylation substrates (PubMed:25415977). Involved in stress responses and sulfur metabolism (PubMed:25415977)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 17, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 17, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 17, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 18, "binding_glycan_count": 0, "secondary_ac_list": "Q0WP46;Q9FFS2", "ec_number_list": "", "go_molecular_function": "GO:0061665 SUMO ligase activity;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0019789 SUMO transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000785 chromatin", "go_biological_process": "GO:0016925 protein sumoylation;GO:0060966 regulation of gene silencing by regulatory ncRNA", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "F4JYG0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JZC2-1", "uniprot_id": "ENAS1_ARATH", "mass": 76351.0, "length": 680, "protein_name": "Cytosolic endo-beta-N-acetylglucosaminidase 1", "gene_name": "ENGASE1", "organism": "Arabidopsis", "refseq_name": "Glycosyl hydrolase family 85", "refseq_ac": "NP_196165", "gene_names_uniprotkb": "ENGASE1; ENGASE85A; K18I23.27", "gene_names_refseq": "AtENGase85A; ENGase85A; Endo-beta-N-acetyglucosaminidase 85A; K18I23.27; K18I23_27", "protein_names_uniprotkb": "Cytosolic endo-beta-N-acetylglucosaminidase 1; 3.2.1.96; AtENGase85A; ENGase 1; Endo-beta-N-acetyglucosaminidase 85A", "protein_names_refseq": "Glycosyl hydrolase family 85", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05460)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21597164;21796445;27862469;9679202", "class_list": "", "function": "Endoglycosidase that releases N-glycans from glycoproteins by cleaving the beta-1,4-glycosidic bond in the N,N'-diacetylchitobiose core. Involved in the production of high-mannose type N-glycans during plant development and fruit maturation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FLA9", "ec_number_list": "3.2.1.96", "go_molecular_function": "GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005773 vacuole", "go_biological_process": "GO:0006517 protein deglycosylation;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JZC2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JZN6-1", "uniprot_id": "KDSRB_ARATH", "mass": 35835.0, "length": 331, "protein_name": "3-dehydrosphinganine reductase TSC10B", "gene_name": "TSC10B", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": "NP_197421", "gene_names_uniprotkb": "TSC10B; T24G5", "gene_names_refseq": "T24G5.100; T24G5_100; TSC10B", "protein_names_uniprotkb": "3-dehydrosphinganine reductase TSC10B; 1.1.1.102; 3-ketodihydrosphingosine reductase; 3-ketosphinganine reductase; KDS reductase", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19200)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;21421810;23111157;27862469", "class_list": "", "function": "Catalyzes the reduction of 3'-oxosphinganine (3-ketodihydrosphingosine/KDS) to sphinganine (dihydrosphingosine/DHS), the second step of de novo sphingolipid biosynthesis. In plants, sphingolipids seems to play a critical role in mineral ion homeostasis, most likely through their involvement in the ion transport functionalities of membrane systems in the root. Is stereospecific for D-erythro-DHS production and does not produce L-threo-DHS., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "1.1.1.102", "go_molecular_function": "GO:0047560 3-dehydrosphinganine reductase activity;GO:0070402 NADPH binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006666 3-keto-sphinganine metabolic process;GO:0030148 sphingolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4JZN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4JZY1-1", "uniprot_id": "CIP1_ARATH", "mass": 181978.0, "length": 1586, "protein_name": "COP1-interactive protein 1", "gene_name": "CIP1", "organism": "Arabidopsis", "refseq_name": "COP1-interactive protein 1", "refseq_ac": "NP_001330520", "gene_names_uniprotkb": "CIP1; K16L22.7", "gene_names_refseq": "CIP1; COP1-interactive protein 1; K16L22.7; K16L22_7", "protein_names_uniprotkb": "COP1-interactive protein 1", "protein_names_refseq": "COP1-interactive protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41790)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "22060019;23820729;25561503;27372427;27862469;28011693;7753789;9872454", "class_list": "", "function": "Positive regulator of abscisic acid (ABA)-mediated signaling pathways involved in abiotic stress responses (e.g. osmotic stress) and leading to various plant adaptation (e.g. stomata closure)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38843;Q9FJ35", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0005200 structural constituent of cytoskeleton", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0042306 regulation of protein import into nucleus;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4JZY1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K0A6-1", "uniprot_id": "MYO2_ARATH", "mass": 138562.0, "length": 1220, "protein_name": "Myosin-2", "gene_name": "ATM2; VIII-2", "organism": "Arabidopsis", "refseq_name": "myosin 2", "refseq_ac": "NP_001078755", "gene_names_uniprotkb": "ATM2; VIII-2; ARABIDOPSIS THALIANA MYOSIN 1; ARABIDOPSIS THALIANA MYOSIN 4; ATM2; ATM4; ATMYOS1; MDK4.10; MDK4_10; MYOS1; MYOSIN 4; myosin 2", "gene_names_refseq": "ARABIDOPSIS THALIANA MYOSIN 1; ARABIDOPSIS THALIANA MYOSIN 4; ATM2; ATM4; ATMYOS1; MDK4.10; MDK4_10; MYOSIN 4; myosin 2", "protein_names_uniprotkb": "Myosin-2; AtATM2; AtMYOS1", "protein_names_refseq": "myosin 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G54280)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10984423;11130714;11516337;17317660;18179725;18393384;21233331;23111157;23820729;25561503;27862469;29167316;30833711;7811972;9679202", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity). Involved in endocytosis via its action in endosomal trafficking., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNH0;Q39157;Q9FL71", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0016459 myosin complex", "go_biological_process": "GO:0006897 endocytosis;GO:0007015 actin filament organization;GO:0030048 actin filament-based movement", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "F4K0A6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K1A8-1", "uniprot_id": "F4K1A8_ARATH", "mass": 16729.0, "length": 147, "protein_name": "C2H2 and C2HC zinc fingers superfamily protein", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "C2H2 and C2HC zinc fingers superfamily protein", "refseq_ac": "NP_001154741", "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "C2H2 and C2HC zinc fingers superfamily protein", "protein_names_refseq": "C2H2 and C2HC zinc fingers superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26749)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130714;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005689 U12-type spliceosomal complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4K1A8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8RYD9-1", "uniprot_id": "TT16_ARATH", "mass": 29698.0, "length": 252, "protein_name": "Protein TRANSPARENT TESTA 16", "gene_name": "TT16", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_001119264", "gene_names_uniprotkb": "TT16; ABS; AGAMOUS-like 32; AGL32; ARABIDOPSIS BSISTER; MKD15.12; MKD15_12; TRANSPARENT TESTA16", "gene_names_refseq": "ABS; AGAMOUS-like 32; AGL32; ARABIDOPSIS BSISTER; MKD15.12; MKD15_12; TRANSPARENT TESTA16; TT16", "protein_names_uniprotkb": "Protein TRANSPARENT TESTA 16; Arabidopsis BSISTER MADS-box protein", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23260)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11862488;12368498;12837945;16080001;22176531;27233529;27776173;27862469;9501997", "class_list": "", "function": "Transcription factor involved in the developmental regulation of the endothelium and in the accumulation of proanthocyanidins (PAs) or condensed tannins which give the seed its brown pigmentation after oxidation (PubMed:12368498, PubMed:16080001). Necessary for the normal activation of the BANYULS promoter in the endothelium body (PubMed:12368498). Is required, together with AGL11/STK for the maternal control of endothelium formation, which is essential for female gametophyte development and fertilization, and seed formation (PubMed:22176531). Interacts genetically with AGL1/SHP1 and AGL5/SHP2 in a partially antagonistic manner and represses AGL1/SHP1, AGL5/SHP2, and AGL8/FUL during flower development. Is essential for the coordination of cell divisions in ovule, seed coat development and endosperm formation (PubMed:27776173). Mediates the crosstalk between endothelium and nucellus to ensure proper seed formation. Functions redundantly with AGL63/GOA to repress nucellus growth and promote its degeneration. Represses the negative regulator of autophagy and programmed cell death HVA22D in the proximal nucellus (PubMed:27233529). Binds specifically to the CArG box DNA sequence 5'-CC (A/T)6 GG-3' (PubMed:16080001)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q540P5;Q9FMX4", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0008360 regulation of cell shape;GO:0045595 regulation of cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RYD9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O23144-1", "uniprot_id": "PPI1_ARATH", "mass": 68879.0, "length": 612, "protein_name": "Proton pump-interactor 1", "gene_name": "PPI1", "organism": "Arabidopsis", "refseq_name": "proton pump interactor 1", "refseq_ac": "NP_194480", "gene_names_uniprotkb": "PPI1; F27G19.100; F27G19_100; proton pump interactor 1", "gene_names_refseq": "F27G19.100; F27G19_100; PPI1; proton pump interactor 1", "protein_names_uniprotkb": "Proton pump-interactor 1", "protein_names_refseq": "proton pump interactor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27500)", "pathway_count": 1, "publication_count": 32, "publication_id_list": "10617198;12182706;14593172;15308754;16279950;17317660;18304198;19376835;19423640;19688752;19796364;20374526;20733066;21768351;22440515;22631563;23111157;23328941;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27419465;27532006;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Promotes AHA1 plasma membrane ATPase activity by binding to a site different from the 14-3-3 binding site., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B9DFB6;Q9SZS5", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0010155 regulation of proton transport", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "O23144-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9SZJ6-1", "uniprot_id": "AGL21_ARATH", "mass": 26411.0, "length": 228, "protein_name": "Agamous-like MADS-box protein AGL21", "gene_name": "AGL21", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 21", "refseq_ac": "NP_195507", "gene_names_uniprotkb": "AGL21; AGAMOUS-like 21; F20D10.60; F20D10_60", "gene_names_refseq": "AGAMOUS-like 21; AGL21; F20D10.60; F20D10_60", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL21", "protein_names_refseq": "AGAMOUS-like 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37940)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11855641;15805477;21924907;27862469", "class_list": "", "function": "Probable transcription factor., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q548I8", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9SZJ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q84MB2-1", "uniprot_id": "TIF8_ARATH", "mass": 38733.0, "length": 361, "protein_name": "Protein TIFY 8", "gene_name": "TIFY8", "organism": "Arabidopsis", "refseq_name": "TIFY domain protein 8", "refseq_ac": "NP_567898", "gene_names_uniprotkb": "TIFY8; F4D11.230; F4D11_230; TIFY domain protein 8", "gene_names_refseq": "F4D11.230; F4D11_230; TIFY domain protein 8; TIFY8", "protein_names_uniprotkb": "Protein TIFY 8", "protein_names_refseq": "TIFY domain protein 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32570)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;17499004;20360743;24416306;27862469", "class_list": "", "function": "Repressor of jasmonate responses., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65542;Q8LCS4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:2000022 regulation of jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84MB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9SHI2-1", "uniprot_id": "Y1723_ARATH", "mass": 122100.0, "length": 1101, "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230", "gene_name": "F20D23.7; F20D23_7", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": "NP_001322898", "gene_names_uniprotkb": "F20D23.7; F20D23_7", "gene_names_refseq": "F20D23.7; F20D23_7", "protein_names_uniprotkb": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230; 2.7.11.1", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17230)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;11910074;27862469", "class_list": "", "function": "", "predicted_glycosites": 19, "predicted_n_glycosites": 19, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 19, "binding_glycan_count": 0, "secondary_ac_list": "Q8GX06", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9SHI2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q93ZS4-1", "uniprot_id": "CIK1_ARATH", "mass": 70171.0, "length": 632, "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 1", "gene_name": "CIK1; NIK3", "organism": "Arabidopsis", "refseq_name": "NSP-interacting kinase 3", "refseq_ac": "NP_176279", "gene_names_uniprotkb": "CIK1; NIK3; AtNIK3; F8A5.31; F8A5_31; NIK3; NSP-interacting kinase 3", "gene_names_refseq": "AtNIK3; F8A5.31; F8A5_31; NIK3; NSP-interacting kinase 3", "protein_names_uniprotkb": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 1; 2.7.11.1; AtNIK3; LRR receptor-like serine/threonine-protein kinase CIK1; Protein NSP-INTERACTING KINASE 3", "protein_names_refseq": "NSP-interacting kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60800)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15489295;20064227;27862469;29581511;34651321;34935965", "class_list": "", "function": "Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS (PubMed:29581511). Involved in defense response to geminivirus infection (PubMed:15489295)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O22717", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0015026 coreceptor activity;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:0048653 anther development;GO:0007639 homeostasis of number of meristem cells", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93ZS4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22703-1", "uniprot_id": "RZ1B_ARATH", "mass": 34398.0, "length": 292, "protein_name": "Glycine-rich RNA-binding protein RZ1B", "gene_name": "RBGB1; RZ1B", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein", "refseq_ac": "NP_564759", "gene_names_uniprotkb": "RBGB1; RZ1B; AtRZ-1b; F8A5.17; F8A5_17; RZ-1b", "gene_names_refseq": "AtRZ-1b; F8A5.17; F8A5_17; RZ-1b", "protein_names_uniprotkb": "Glycine-rich RNA-binding protein RZ1B; AtRZ-1a", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60650)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;20850334;27862469;30833711", "class_list": "", "function": "Binds RNA and DNA sequences non-specifically. May be involved in tolerance to cold stress., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0048026 positive regulation of mRNA splicing, via spliceosome;GO:0009409 response to cold;GO:0045892 negative regulation of DNA-templated transcription;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O22703-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8W4J8-1", "uniprot_id": "TIF7_ARATH", "mass": 28842.0, "length": 267, "protein_name": "Protein TIFY 7", "gene_name": "TIFY7", "organism": "Arabidopsis", "refseq_name": "TIFY domain/Divergent CCT motif family protein", "refseq_ac": "NP_001031264", "gene_names_uniprotkb": "TIFY7; F5A18.12; F5A18_12; JASMONATE-ZIM-DOMAIN PROTEIN 9; JAZ9", "gene_names_refseq": "F5A18.12; F5A18_12; JASMONATE-ZIM-DOMAIN PROTEIN 9; JAZ9; TIFY7", "protein_names_uniprotkb": "Protein TIFY 7; Jasmonate ZIM domain-containing protein 9", "protein_names_refseq": "TIFY domain/Divergent CCT motif family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70700)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;14593172;17499004;17637675;17637677;17675405;18223147;18547396;19151223;19309455;20360743;21321051;23169619;26258305;27862469;31988260", "class_list": "", "function": "Repressor of jasmonate responses., [UniProtKB, UniProtKB]; Repressor of jasmonate responses. Jasmonoyl-isoleucine (JA-Ile) specifically promotes COI1-TIFY7/JAZ9 interaction (PubMed:19151223). Interacts with and suppresses RHD6 and RSL1 transcription factor activities to negatively regulate jasmonate-stimulated root hair development (PubMed:31988260)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MSB0;F4I6W0;Q0WLN3;Q2V4D4;Q9CAC0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8W4J8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P29381-1", "uniprot_id": "AGL1_ARATH", "mass": 28336.0, "length": 248, "protein_name": "Agamous-like MADS-box protein AGL1", "gene_name": "AGL1; SHP1", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_191437", "gene_names_uniprotkb": "AGL1; SHP1; AGAMOUS-like 1; AGL1; SHATTERPROOF 1; SHP1; T20N10_130", "gene_names_refseq": "AGAMOUS-like 1; AGL1; SHATTERPROOF 1; SHP1", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL1; Protein SHATTERPROOF 1", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G58780)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;15805477;1672119;27776173;27862469", "class_list": "", "function": "Probable transcription factor., [UniProtKB, UniProtKB]; Probable transcription factor. Interacts genetically with TT16/AGL32 in a partially antagonistic manner during flower development. Is essential for the coordination of cell divisions in ovule, seed coat development and endosperm formation (PubMed:27776173)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010047 fruit dehiscence;GO:0048440 carpel development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P29381-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8LAL2-1", "uniprot_id": "IAA26_ARATH", "mass": 30124.0, "length": 269, "protein_name": "Auxin-responsive protein IAA26", "gene_name": "IAA26; PAP1", "organism": "Arabidopsis", "refseq_name": "phytochrome-associated protein 1", "refseq_ac": "NP_188271", "gene_names_uniprotkb": "IAA26; PAP1; IAA26; MDC8.13; PAP1", "gene_names_refseq": "IAA26; PAP1; indole-3-acetic acid inducible 26; phytochrome-associated protein 1", "protein_names_uniprotkb": "Auxin-responsive protein IAA26; Indoleacetic acid-induced protein 26; Phytochrome-associated protein 1", "protein_names_refseq": "phytochrome-associated protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16500)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;11130713;12036262;14593172;14742873;18258861;27862469", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LK75;Q9ZSY7", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LAL2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q949N0-1", "uniprot_id": "NAC53_ARATH", "mass": 62356.0, "length": 549, "protein_name": "NAC domain-containing protein 53", "gene_name": "NAC053", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 53", "refseq_ac": "NP_566376", "gene_names_uniprotkb": "NAC053; AIF; ANAC053; ANTHER INDEHISCENCE FACTOR; F13M14.22; F18K10.7; NTL4; anac053", "gene_names_refseq": "AIF; ANAC053; ANTHER INDEHISCENCE FACTOR; NAC domain containing protein 53; NAC with transmembrane motif 1-like 4; NAC053; NTL4; anac053", "protein_names_uniprotkb": "NAC domain-containing protein 53; ANAC053; Protein ANTHER INDEHISCENCE FACTOR; Protein NTM1-like 4", "protein_names_refseq": "NAC domain containing protein 53", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10500)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;15029955;17158162;22313226;24323506;25219309;27862469", "class_list": "", "function": "Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:24323506, PubMed:25219309, Ref.6). Promotes reactive oxygen species (ROS) production during drought-induced leaf senescence. In response to abscisic acid (ABA)-mediated drought stress signals, binds directly to the promoters of RBOHC and RBOHE genes, encoding ROS biosynthetic enzymes, resulting in ROS accumulation and triggering leaf senescence via programmed cell death (PCD). ROS-induced leaf senescence sustains plant survival under drought conditions (PubMed:22313226). Involved in heat stress response. Modulates PCD through a ROS-mediated positive feedback control under heat stress conditions. This may provide an adaptation strategy for plant survival under extreme heat stress conditions (PubMed:25219309). Acts as a repressor in preventing anther dehiscence during stamen development by suppressing genes that participate in jasmonic acid (JA) biosynthesis, such as DAD1, AOS, AOC3, OPR3 and 4CLL5/OPCL1 (PubMed:24323506)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAH6;Q9SQY1", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0009819 drought recovery;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q949N0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8GXJ1-1", "uniprot_id": "HDA15_ARATH", "mass": 60020.0, "length": 552, "protein_name": "Histone deacetylase 15", "gene_name": "HDA15", "organism": "Arabidopsis", "refseq_name": "histone deacetylase 15", "refseq_ac": "NP_566612", "gene_names_uniprotkb": "HDA15; ATHDA15; MYF24_23; histone deacetylase 15", "gene_names_refseq": "ATHDA15; HDA15; histone deacetylase 15", "protein_names_uniprotkb": "Histone deacetylase 15; 3.5.1.98", "protein_names_refseq": "histone deacetylase 15", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18520)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11130713;11910074;12466527;22363501;23548744;27862469;30979883;31061103;31400169;32878973", "class_list": "", "function": "Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (PubMed:23548744). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (PubMed:23548744). Histone deacetylases act via the formation of large multiprotein complexes (Probable). Represses chlorophyll biosynthesis and photosynthesis in the dark (PubMed:23548744). Is recruited by PIF3 to the promoters of chlorophyll biosynthetic and photosynthetic genes, and represses their transcription by histone deacetylation (PubMed:23548744). Involved in the repression of hypocotyl cell elongation to promote photomorphogenesis (PubMed:31061103). Is recruited by HY5 to the promoters of a subset of cell wall organization and auxin signaling-related genes, and represses gene expression by decreasing the levels of histone H4 acetylation in a light-dependent manner (PubMed:31061103). Promotes abscisic acid (ABA) signaling (PubMed:30979883). Is recruited by MYB96 to the promoters of a subset of Rho GTPase (ROP) genes, which repress ABA signaling at the early stages of signal transduction (PubMed:30979883). Represses ROP expression by removing acetyl groups of histone H3 and H4 from the cognate regions, particularly in the presence of ABA (PubMed:30979883). Represses the plant response to elevated ambient temperature by directly repressing warm temperature-responsive genes (PubMed:31400169)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J8S2;Q3EB46;Q8LD93;Q9LS38", "ec_number_list": "3.5.1.98", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004407 histone deacetylase activity;GO:0141221 histone deacetylase activity, hydrolytic mechanism", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051289 protein homotetramerization;GO:0009408 response to heat;GO:0045814 negative regulation of gene expression, epigenetic;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GXJ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P38418-1", "uniprot_id": "LOX2_ARATH", "mass": 102046.0, "length": 896, "protein_name": "Lipoxygenase 2, chloroplastic", "gene_name": "LOX2", "organism": "Arabidopsis", "refseq_name": "lipoxygenase 2", "refseq_ac": "NP_566875", "gene_names_uniprotkb": "LOX2; ATLOX2; T14D3.80; lipoxygenase 2", "gene_names_refseq": "ARABIODOPSIS THALIANA LIPOXYGENASE 2; ATLOX2; LOX2; lipoxygenase 2", "protein_names_uniprotkb": "Lipoxygenase 2, chloroplastic; 1.13.11.12; AtLOX2", "protein_names_refseq": "lipoxygenase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45140)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "11090221;11117257;11130713;11161062;11874572;11891244;11910074;14593172;14716563;15879447;17313166;17369372;17510065;17545220;18431481;18487634;18949503;23820729;25561503;27862469;7567995;8290626", "class_list": "", "function": "13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Required for the wound-induced synthesis of jasmonic acid (JA) in leaves., [UniProtKB, PubMed, PubMed]; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLR8;Q56WG6;Q8GW45;Q8W4E4;Q9M1U5", "ec_number_list": "1.13.11.-;1.13.11.12", "go_molecular_function": "GO:0003729 mRNA binding;GO:0046872 metal ion binding;GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0016165 linoleate 13S-lipoxygenase activity;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0051707 response to other organism;GO:0034440 lipid oxidation;GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "P38418-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P49678-1", "uniprot_id": "IAA2_ARATH", "mass": 19910.0, "length": 174, "protein_name": "Auxin-responsive protein IAA2", "gene_name": "IAA2", "organism": "Arabidopsis", "refseq_name": "indole-3-acetic acid inducible 2", "refseq_ac": "NP_188943", "gene_names_uniprotkb": "IAA2; MXC7.6", "gene_names_refseq": "IAA2; indole-3-acetic acid inducible 2", "protein_names_uniprotkb": "Auxin-responsive protein IAA2; Indoleacetic acid-induced protein 2", "protein_names_refseq": "indole-3-acetic acid inducible 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23030)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11130713;12036262;14593172;14742873;18258861;27532006;27862469;7658471;8278386;9342315", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22596", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P49678-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9M2R4-1", "uniprot_id": "Q9M2R4_ARATH", "mass": 72421.0, "length": 662, "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_001326829", "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "Leucine-rich repeat protein kinase family protein", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57830)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130713;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VG07", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0016020 membrane;GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9M2R4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LJY0-1", "uniprot_id": "PRK4_ARATH", "mass": 76102.0, "length": 679, "protein_name": "Pollen receptor-like kinase 4", "gene_name": "PRK4", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_188654", "gene_names_uniprotkb": "PRK4; MAL21.21; PRKA; pollen receptor like kinase 4", "gene_names_refseq": "PRK4; pollen receptor like kinase 4", "protein_names_uniprotkb": "Pollen receptor-like kinase 4; 2.7.11.1; AtPRK4", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20190)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10907853;11130713;12139002;14593172;18463617;20064227;23024212;23111157;25398910;27862469", "class_list": "", "function": "Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212). Can phosphorylate ROPGEF1 in vitro (PubMed:23024212)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WQ0", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9LJY0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8LPN7-1", "uniprot_id": "RNG1L_ARATH", "mass": 35705.0, "length": 328, "protein_name": "E3 ubiquitin-protein ligase RING1-like", "gene_name": "BTL08", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": "NP_001326918", "gene_names_uniprotkb": "BTL08; MPN9.19", "gene_names_refseq": "", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RING1-like; 2.3.2.27; RING finger protein 1; RING-type E3 ubiquitin transferase RING1-like", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19950)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11130713;11910074;14593172;20376576;22223895;22631563;23328941;25561503;27862469;28011693", "class_list": "", "function": "E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Promotes polyubiquitination of target proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXE4;Q9LT14", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8LPN7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q3EBC8-1", "uniprot_id": "DCL2_ARATH", "mass": 156865.0, "length": 1388, "protein_name": "Endoribonuclease Dicer homolog 2", "gene_name": "DCL2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "DCL2; ATDCL2; DICER-LIKE 2; T17B22.1; T17B22.28; dicer-like 2", "gene_names_refseq": "", "protein_names_uniprotkb": "Endoribonuclease Dicer homolog 2; 3.1.26.-; AtDCL2; Dicer-like protein 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03300)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;15024409;16040244;16638569;16810317;17586651;17592042;18335032;18353962;18463617;22060019;24265739;26187819;27862469", "class_list": "", "function": "Ribonuclease (RNase) III involved in RNA-mediated post-transcriptional gene silencing (PTGS). Involved in the processing of natural small interfering RNAs (nat-siRNAs, derived from cis-natural antisense transcripts) by cleaving small dsRNAs into 24 nucleotide nat-siRNAs. Plays an essential role in transitive silencing of transgenes by processing secondary siRNAs. This pathway, which requires DCL4 and RDR6, amplifies silencing by using the target RNA as substrate to generate secondary siRNAs, providing an efficient mechanism for long-distance silencing. May participate with DCL3 in the production of 24 nucleotide repeat-associated siRNAs (ra-siRNAs) which derive from heterochromatin and DNA repeats such as transposons. Plays a role in antiviral RNA silencing. Involved in the production of viral siRNAs derived from the turnip crinkle virus (TCV) and tobacco rattle virus (TRV). Targeted by the viral silencing suppressor (VSR) protein 2b of the cucumber mosaic virus (CMV) that inactivates DCL2 function in RNA silencing. Does not seem to be involved in microRNAs (miRNAs) processing., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q1KL57;Q1KL58;Q9M9P8", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004386 helicase activity;GO:0004525 ribonuclease III activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0036464 cytoplasmic ribonucleoprotein granule", "go_biological_process": "GO:0051607 defense response to virus;GO:0030422 siRNA processing;GO:0006995 cellular response to nitrogen starvation;GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation;GO:0010267 ta-siRNA processing", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q3EBC8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q94C11-1", "uniprot_id": "SUGP1_ARATH", "mass": 48693.0, "length": 443, "protein_name": "SURP and G-patch domain-containing protein 1-like protein", "gene_name": "F4F15.230", "organism": "Arabidopsis", "refseq_name": "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein", "refseq_ac": "NP_566957", "gene_names_uniprotkb": "F4F15.230", "gene_names_refseq": "", "protein_names_uniprotkb": "SURP and G-patch domain-containing protein 1-like protein; SF4-like protein; Splicing factor 4-like protein", "protein_names_refseq": "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52120)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130713;14593172;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SUZ3", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q94C11-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9S7I6-1", "uniprot_id": "RPK2_ARATH", "mass": 125230.0, "length": 1151, "protein_name": "LRR receptor-like serine/threonine-protein kinase RPK2", "gene_name": "RPK2", "organism": "Arabidopsis", "refseq_name": "receptor-like protein kinase 2", "refseq_ac": "NP_186862", "gene_names_uniprotkb": "RPK2; CLI1; F14P3.22; F1C9.8; F1C9_8; TOAD2; TOADSTOOL 2; clv3 peptide insensitive 1; receptor-like protein kinase 2", "gene_names_refseq": "CLI1; F1C9.8; F1C9_8; RPK2; TOAD2; TOADSTOOL 2; clv3 peptide insensitive 1; receptor-like protein kinase 2", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase RPK2; 2.7.11.1; Protein TOADSTOOL 2; Receptor-like protein kinase 2", "protein_names_refseq": "receptor-like protein kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02130)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;11910074;17419837;17543866;18158146;20064227;27862469;29581511", "class_list": "", "function": "Key regulator of anther development (e.g. lignification pattern), including tapetum degradation during pollen maturation (e.g. germination capacity). Together with RPK1, required for pattern formation along the radial axis (e.g. the apical embryonic domain cell types that generate cotyledon primordia), and the apical-basal axis (e.g. differentiation of the basal pole during early embryogenesis)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "C0LGM5;Q8GYR1", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0009409 response to cold;GO:0009414 response to water deprivation;GO:0009808 lignin metabolic process;GO:0009846 pollen germination;GO:0010073 meristem maintenance", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9S7I6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9C5W9-1", "uniprot_id": "ARFR_ARATH", "mass": 67662.0, "length": 602, "protein_name": "Auxin response factor 18", "gene_name": "ARF18", "organism": "Arabidopsis", "refseq_name": "auxin response factor 18", "refseq_ac": "NP_567119", "gene_names_uniprotkb": "ARF18; F15G16.220; F21F14.12; auxin response factor 18", "gene_names_refseq": "ARF18; F21F14.12; auxin response factor 18", "protein_names_uniprotkb": "Auxin response factor 18", "protein_names_refseq": "auxin response factor 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61830)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;12036261;14593172;18986826;27862469", "class_list": "", "function": "Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WM85;Q9M355", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9C5W9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6X7J9-1", "uniprot_id": "WOX4_ARATH", "mass": 28675.0, "length": 251, "protein_name": "WUSCHEL-related homeobox 4", "gene_name": "WOX4", "organism": "Arabidopsis", "refseq_name": "WUSCHEL related homeobox 4", "refseq_ac": "NP_175145", "gene_names_uniprotkb": "WOX4; F2G19.11; F2G19_11; WUSCHEL related homeobox 4", "gene_names_refseq": "F2G19.11; F2G19_11; WOX4; WUSCHEL related homeobox 4", "protein_names_uniprotkb": "WUSCHEL-related homeobox 4", "protein_names_refseq": "WUSCHEL related homeobox 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G46480)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14711878;20044450;20729381;21926336;23578929;27862469;28154133", "class_list": "", "function": "Promotes differentiation and/or maintenance of the vascular procambium, the initial cells of the developing vasculature (PubMed:20044450). Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth (PubMed:20729381). Is required for promoting the proliferation of procambial/cambial stem cells but not for repressing their commitment to xylem differentiation in response to the TDIF signal (PubMed:20729381). Acts redundantly with WOX14 downstream of the TDR/PXY receptor kinase to regulate procambial cell proliferation and differentiation in vascular tissue, independently of any role in vascular (PubMed:23578929). Acts as a cambium regulator in the inflorescence stem (PubMed:21926336). Is required for auxin-dependent cambium stimulation in the inflorescence stem (PubMed:21926336)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C632", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0007165 signal transduction;GO:0051301 cell division;GO:0009888 tissue development;GO:0010087 phloem or xylem histogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6X7J9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P35631-1", "uniprot_id": "AP1_ARATH", "mass": 30182.0, "length": 256, "protein_name": "Floral homeotic protein APETALA 1", "gene_name": "AP1", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_177074", "gene_names_uniprotkb": "AP1; AGAMOUS-like 7; AGL7; APETALA1; AtAP1; F4N2.9; F4N2_9", "gene_names_refseq": "AGAMOUS-like 7; AGL7; AP1; APETALA1; AtAP1; F4N2.9; F4N2_9; FLORAL HOMEOTIC PROTEIN APETALA1", "protein_names_uniprotkb": "Floral homeotic protein APETALA 1; Agamous-like MADS-box protein AGL7", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69120)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;11206550;11283333;11973317;1359429;14593172;15805477;16080001;16679456;17428825;17794879;19656343;27862469;8643482;9783581", "class_list": "", "function": "Transcription factor that promotes early floral meristem identity in synergy with LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Is indispensable for normal development of sepals and petals in flowers. Positively regulates the B class homeotic proteins APETALA3 and PISTILLATA with the cooperation of LEAFY and UFO. Interacts with SEPALLATA3 or AP3/PI heterodimer to form complexes that could be involved in genes regulation during floral meristem development. Positively regulates AGAMOUS in cooperation with LEAFY. Displays a redundant function with CAULIFLOWER in the up-regulation of LEAFY. Together with AGL24 and SVP, controls the identity of the floral meristem and regulates expression of class B, C and E genes. Represses flowering time genes AGL24, SVP and SOC1 in emerging floral meristems., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q680D4;Q8LA98;Q9LQA8", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "P35631-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9C7T4-1", "uniprot_id": "BH096_ARATH", "mass": 35972.0, "length": 320, "protein_name": "Transcription factor bHLH96", "gene_name": "BHLH096; BHLH96", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": "NP_177366", "gene_names_uniprotkb": "BHLH096; BHLH96; EN15; T9N14.4; T9N14_4; bHLH096; bHLH96", "gene_names_refseq": "T9N14.4; T9N14_4; bHLH096; bHLH96", "protein_names_uniprotkb": "Transcription factor bHLH96; AtbHLH96; Basic helix-loop-helix protein 96; Transcription factor EN 15; bHLH 96; bHLH transcription factor bHLH096", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72210)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12679534;12897250;14593172;14600211;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9C7T4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9ZRF9-1", "uniprot_id": "RPK1_ARATH", "mass": 59742.0, "length": 540, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase RPK1", "gene_name": "RPK1", "organism": "Arabidopsis", "refseq_name": "receptor-like protein kinase 1", "refseq_ac": "NP_177087", "gene_names_uniprotkb": "RPK1; F23O10.15; F4N2.23; F4N2_23; TOAD1", "gene_names_refseq": "AtRPK1; F4N2.27; F4N2_27; RECEPTOR-LIKE PROTEIN KINASE 1; RPK1; receptor-like protein kinase 1", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase RPK1; 2.7.11.1; Protein TOADSTOOL 1; Receptor-like protein kinase 1", "protein_names_refseq": "receptor-like protein kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69270)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15772289;17543866;18158146;20064227;27862469;9112773", "class_list": "", "function": "Involved in the main abscisic acid-mediated (ABA) signaling pathway and in early ABA perception. Together with RPK2, required for pattern formation along the radial axis (e.g. the apical embryonic domain cell types that generate cotyledon primordia), and the apical-basal axis (e.g. differentiation of the basal pole during early embryogenesis)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQ97", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005777 peroxisome;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9ZRF9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6R0A6-1", "uniprot_id": "MYB63_ARATH", "mass": 33780.0, "length": 294, "protein_name": "Transcription factor MYB63", "gene_name": "MYB63", "organism": "Arabidopsis", "refseq_name": "myb domain protein 63", "refseq_ac": "NP_001321204", "gene_names_uniprotkb": "MYB63; ATMYB63; MYB DOMAIN PROTEIN 63; YUP8H12R.21; YUP8H12R_21; myb domain protein 63", "gene_names_refseq": "ATMYB63; MYB DOMAIN PROTEIN 63; MYB63; YUP8H12R.21; YUP8H12R_21; myb domain protein 63", "protein_names_uniprotkb": "Transcription factor MYB63; AtMYB63; Myb-related protein 63", "protein_names_refseq": "myb domain protein 63", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79180)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11597504;16463103;19122102;19838072;22197883;27862469;9839469", "class_list": "", "function": "Transcriptional activator that binds DNA to the AC cis-elements 5'-ACCTACC-3', 5'-ACCAACC-3' and 5'-ACCTAAC-3' of promoters and specifically activates lignin biosynthetic genes during secondary wall formation mediated by SND1., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64534;Q9SBF8", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009411 response to UV;GO:0009809 lignin biosynthetic process;GO:2000652 regulation of secondary cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6R0A6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O04492-1", "uniprot_id": "DRB1_ARATH", "mass": 45547.0, "length": 419, "protein_name": "Double-stranded RNA-binding protein 1", "gene_name": "DRB1; HYL1", "organism": "Arabidopsis", "refseq_name": "dsRNA-binding domain-like superfamily protein", "refseq_ac": "NP_563850", "gene_names_uniprotkb": "DRB1; HYL1; AtDRB1; DRB1; DSRNA-BINDING PROTEIN 1; F21M12.9; F21M12_9; HYL1; HYPONASTIC LEAVES 1", "gene_names_refseq": "AtDRB1; DRB1; DSRNA-BINDING PROTEIN 1; F21M12.9; F21M12_9; HYL1; HYPONASTIC LEAVES 1", "protein_names_uniprotkb": "Double-stranded RNA-binding protein 1; AtDRB1; Protein HYPONASTIC LEAVES 1; dsRNA-binding protein 1", "protein_names_refseq": "dsRNA-binding domain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09700)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;11148283;14593172;14722360;14972688;15821876;16428603;16889646;17337628;17442570;18632569;19304749;19423640;19861421;20462493;20735118;26227967;27862469", "class_list": "", "function": "Binds double-stranded RNA., [UniProtKB, UniProtKB]; Double-stranded RNA-binding protein involved in RNA-mediated post-transcriptional gene silencing (PTGS). Functions in the microRNAs (miRNAs) biogenesis by assisting DICER-LIKE 1 (DCL1) in the accurate processing from primary miRNAs (pri-miRNAs) to miRNAs in the nucleus. Forms a complex with SERRATE (SE) and DCL1 to promote accurate processing of pri-miRNAs by DCL1. Binds and assist DCL1 for accurate processing of precursor miRNAs (pre-miRNA). Indirectly involved in the production of trans-acting small interfering RNAs (ta-siRNAs) derived from the TAS1, TAS2 or TAS3 endogenous transcripts by participating in the production of their initiating miRNAs. Involved with argonaute 1 (AGO1) in the guide strand selection from miRNA duplexes, presumably by directional loading of the miRNA duplex (guide stand and passenger strand) onto the RNA-induced silencing complex (RISC) for passenger strand degradation. Does not participate in sense transgene-induced post-transcriptional gene silencing (S-PTGS). Involved in several plant development aspects and response to hormones through its role in miRNAs processing., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3F9", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding;GO:0003725 double-stranded RNA binding;GO:0035198 miRNA binding;GO:0004525 ribonuclease III activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0010445 nuclear dicing body", "go_biological_process": "GO:0006396 RNA processing;GO:0031054 pre-miRNA processing;GO:0035196 miRNA processing;GO:0010468 regulation of gene expression;GO:0035279 miRNA-mediated gene silencing by mRNA destabilization", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "O04492-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8RY71-1", "uniprot_id": "ESP_ARATH", "mass": 37008.0, "length": 341, "protein_name": "N-(sulfonatooxy)alkenimidothioic acid sulfate-lyase (epithionitrile-forming)", "gene_name": "ESP", "organism": "Arabidopsis", "refseq_name": "epithiospecifier protein", "refseq_ac": "NP_175806", "gene_names_uniprotkb": "ESP; ESR; F15I1.12; F15I1_12; TASTY; epithiospecifier protein", "gene_names_refseq": "EPITHIOSPECIFYING SENESCENCE REGULATOR; ESP; ESR; F15I1.12; F15I1_12; TASTY; epithiospecifier protein", "protein_names_uniprotkb": "N-(sulfonatooxy)alkenimidothioic acid sulfate-lyase (epithionitrile-forming); 4.8.1.5; 4.8.1.6; AtESP; AtESR; Epithionitrile-specifier protein; Epithiospecifier protein; Protein EPITHIOSPECIFYING SENESCENCE REGULATOR", "protein_names_refseq": "epithiospecifier protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54040)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130712;11752388;13677466;14593172;15845404;17061170;17369373;17390109;17920088;18245336;19224919;22223895;22954730;23999604;27498030;27862469;28479247", "class_list": "", "function": "Specifier protein that contributes to constitutive and herbivore-induced simple nitrile formation (By similarity). Converts glucosinolates both to epithionitriles and to simple nitriles in the presence of myrosinase (PubMed:23999604). Promotes the formation of epithionitriles after hydrolysis of alkenylglucosinolates containing a terminal double bond. Mediates indol-3-ylacetonitrile (IACN) production from indol-3-ylmethylglucosinolate (glucobrassicin) (PubMed:22954730). Triggers the production of 3,4-epithiobutylnitrile from 2-propenylisothiocyanate, product of 2-propenylglucosinolate (sinigrin) catalysis by myrosinase (PubMed:19224919, PubMed:22954730). Seems inactive toward benzylglucosinolate (glucotropaeolin) (PubMed:22954730). Acts as a negative regulator of senescence., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 14, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0LYN4;B0LYN5;B0LYN6;B0LYN7;B0LYN8;B0LYP0;B0LYP2;B0LYP4;B0LYP6;B0LYS4;B0LYT0;B0LYT3;B0LYT8;B0LYT9;B0LYU6;B0LYU8;B0LYV4;B0LYW2;B0LYW3;B0LYW5;B0LYW7;B0LYX3;B0LYX4;B0LYX6;B0LYX7;Q39104;Q93VB6;Q9SYG0", "ec_number_list": "4.8.1.5;4.8.1.6", "go_molecular_function": "GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0030234 enzyme regulator activity;GO:0016829 lyase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0009753 response to jasmonic acid;GO:0010150 leaf senescence;GO:0019762 glucosinolate catabolic process;GO:0080028 nitrile biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RY71-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8RWZ1-1", "uniprot_id": "SUB_ARATH", "mass": 84460.0, "length": 768, "protein_name": "Protein STRUBBELIG", "gene_name": "SUB", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_172580", "gene_names_uniprotkb": "SUB; SCM; SCRAMBLED; SRF9; STRUBBELIG-RECEPTOR FAMILY 9; STRUBBELIG; T19D16.1; T19D16.8; T28P6.18", "gene_names_refseq": "AT1G11140; SCM; SCRAMBLED; SRF9; STRUBBELIG-RECEPTOR FAMILY 9; STRUBBELIG; SUB; T19D16.8", "protein_names_uniprotkb": "Protein STRUBBELIG; Leucine-rich repeat receptor kinase-like protein SUB; Protein SCRAMBLED", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11130)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;14593172;15618487;15951420;16317033;17027738;17397538;18771664;21603601;23368817;24173806;25256344;25561503;27862469", "class_list": "", "function": "Regulates the expression of transcription factors that define the cell fates. Acts in a non-cell-autonomous fashion, functions in a radial inside-out signaling process, and mediates cell morphogenesis and cell fate across clonally distinct cell layers in floral primordia, developing ovules, and root meristems. Seems to be required for the regulation of cell shape and the orientation of the mitotic division plane. Involved in root hair specification, in the formation of the outer integument and the shape of organs such as carpels and petals and is necessary for the shape and height of the stem. Non-functional SUB proteins are retained in the endoplasmic reticulum and degraded by endoplasmic reticulum-associated degradation (ERAD). Collaboratively with QKY and POQ, regulates cell growth anisotropy during gynoecium development, thus linking together cell-cell communication and cellular growth (PubMed:24173806). Together with QKY, links RLK-dependent signal transduction and intercellular communication mediated by plasmodesmata (PD) to regulate tissue morphogenesis (PubMed:25256344)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 3, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 20, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O04081;Q9SXA2", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0016020 membrane", "go_biological_process": "GO:0048729 tissue morphogenesis;GO:0007165 signal transduction;GO:0042127 regulation of cell population proliferation;GO:0000902 cell morphogenesis;GO:0010071 root meristem specification", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8RWZ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q38822-1", "uniprot_id": "IAA3_ARATH", "mass": 21520.0, "length": 189, "protein_name": "Auxin-responsive protein IAA3", "gene_name": "IAA3; SHY2", "organism": "Arabidopsis", "refseq_name": "AUX/IAA transcriptional regulator family protein", "refseq_ac": "NP_171920", "gene_names_uniprotkb": "IAA3; SHY2; F19P19.32; F19P19_32; IAA3; SHORT HYPOCOTYL 2; SHY2", "gene_names_refseq": "F19P19.32; F19P19_32; IAA3; SHORT HYPOCOTYL 2; SHY2; indole-3-acetic acid inducible 3", "protein_names_uniprotkb": "Auxin-responsive protein IAA3; Indoleacetic acid-induced protein 3; Short hypocotyl; Suppressor of HY2", "protein_names_refseq": "AUX/IAA transcriptional regulator family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04240)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11115889;11130712;11884676;12036262;14534134;14593172;14617065;14742873;18258861;19039136;20605455;21149702;23425316;27862469;7658471;9895319", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04741", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q38822-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q94JL3-1", "uniprot_id": "BH112_ARATH", "mass": 43041.0, "length": 393, "protein_name": "Transcription factor bHLH112", "gene_name": "ATBHLH112; BHLH112", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": "NP_001322872", "gene_names_uniprotkb": "ATBHLH112; BHLH112; EN64; T13M11.1; T13M11_1", "gene_names_refseq": "T13M11.1; T13M11_1", "protein_names_uniprotkb": "Transcription factor bHLH112; AtbHLH112; Basic helix-loop-helix protein 112; Transcription factor EN 64; bHLH 112; bHLH transcription factor bHLH112", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G61660)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12679534;12897250;14593172;14600211;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3ECK8;Q8LE61;Q9SYA1", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0042631 cellular response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94JL3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P14712-1", "uniprot_id": "PHYA_ARATH", "mass": 124501.0, "length": 1122, "protein_name": "Phytochrome A", "gene_name": "PHYA", "organism": "Arabidopsis", "refseq_name": "phytochrome A", "refseq_ac": "NP_001117256", "gene_names_uniprotkb": "PHYA; ELONGATED HYPOCOTYL 8; F14J9.23; F14J9_23; FAR RED ELONGATED 1; FAR RED ELONGATED HYPOCOTYL 2; FHY2; FRE1; HY8; phytochrome A", "gene_names_refseq": "ELONGATED HYPOCOTYL 8; F14J9.23; F14J9_23; FAR RED ELONGATED 1; FAR RED ELONGATED HYPOCOTYL 2; FHY2; FRE1; HY8; PHYA; phytochrome A", "protein_names_uniprotkb": "Phytochrome A; Protein ELONGATED HYPOCOTYL 8; Protein FAR RED ELONGATED 1; Protein FAR RED ELONGATED HYPOCOTYL 2", "protein_names_refseq": "phytochrome A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09570)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;12468726;14593172;15465053;15707897;17566111;18390804;18722184;19208901;19482971;21884939;21969386;22895253;23708772;2606345;27862469;31732705;8400877", "class_list": "", "function": "Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Involved in the flowering time regulation. Can phosphorylate FHY1 and, possibly, FHL, in red light conditions; this inactivates their co-shuttling to the nucleus (PubMed:19208901). Regulates phototropic responses both in the nucleus (e.g. hypocotyl elongation and cotyledon opening under high-irradiance conditions and seed germination under very-low-fluence conditions) and in the cytoplasm (e.g. negative gravitropism in blue light and red-enhanced phototropism) (PubMed:17566111). Promotes seed germination, suppression of hypocotyl elongation, and randomization of hypocotyl growth orientation in far-red light; these responses to far-red light are repressed by UNE10/PIF8 (PubMed:31732705). Stabilizes UNE10/PIF8 but sequesters PIF3/PAP3 from its target genes promoters in far-red light (PubMed:31732705)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H6K9", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding;GO:0004672 protein kinase activity;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0000155 phosphorelay sensor kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016607 nuclear speck;GO:0016604 nuclear body", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0009584 detection of visible light;GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P14712-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9C5X0-1", "uniprot_id": "IAA34_ARATH", "mass": 21405.0, "length": 185, "protein_name": "Auxin-responsive protein IAA34", "gene_name": "IAA34", "organism": "Arabidopsis", "refseq_name": "indole-3-acetic acid inducible 34", "refseq_ac": "NP_172959", "gene_names_uniprotkb": "IAA34; T15D22.10; T15D22_10", "gene_names_refseq": "IAA34; T15D22.10; T15D22_10; indole-3-acetic acid inducible 34", "protein_names_uniprotkb": "Auxin-responsive protein IAA34; Indoleacetic acid-induced protein 34", "protein_names_refseq": "indole-3-acetic acid inducible 34", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15050)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12036262;14593172;14742873;27862469", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9Q0", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9C5X0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22040-1", "uniprot_id": "ANP1_ARATH", "mass": 73470.0, "length": 666, "protein_name": "Mitogen-activated protein kinase kinase kinase ANP1", "gene_name": "ANP1; NP1", "organism": "Arabidopsis", "refseq_name": "NPK1-related protein kinase 1", "refseq_ac": "NP_563832", "gene_names_uniprotkb": "ANP1; NP1; ANP1; F7G19.13; F7G19_13; MAP KINASE KINASE KINASE 1; MAPKKK1; NPK1-related protein kinase 1", "gene_names_refseq": "ANP1; F7G19.13; F7G19_13; MAP KINASE KINASE KINASE 1; MAPKKK1; NP1; NPK1-related protein kinase 1", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase kinase ANP1; 2.7.11.25; Arabidopsis NPK1-related kinase 1", "protein_names_refseq": "NPK1-related protein kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09000)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10717008;11130712;11910074;12034900;14593172;27862469;9263451", "class_list": "", "function": "May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04030;O22039;Q8GZ05", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004709 MAP kinase kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0007165 signal transduction;GO:0046777 protein autophosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "O22040-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q17TI5-1", "uniprot_id": "BRX_ARATH", "mass": 38761.0, "length": 344, "protein_name": "Protein BREVIS RADIX", "gene_name": "BRX", "organism": "Arabidopsis", "refseq_name": "DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein", "refseq_ac": "NP_174471", "gene_names_uniprotkb": "BRX; BREVIS RADIX; F5M6.11; F5M6_11; NIP3:1; NLM9", "gene_names_refseq": "1; BREVIS RADIX; BRX; F5M6.11; F5M6_11; NIP3; NLM9; NOD26-like intrinsic protein 3", "protein_names_uniprotkb": "Protein BREVIS RADIX; AtBRX", "protein_names_refseq": "DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31880)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;14593172;15031265;16514016;17006513;19037657;19201913;19465596;20649916;21149702;23569225;25049386;27354416;27862469;28652362", "class_list": "", "function": "Acts as a regulator of cell proliferation and elongation in the root and shoot (PubMed:25049386, PubMed:28652362). Regulates roots architecture and primary root protophloem differentiation (PubMed:25049386, PubMed:28652362). BRX, BAM3, and CLE45 act together to regulate the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem (PubMed:23569225). Probable transcription regulator. Regulated by the auxin response factor ARF5. Polarly localized in vascular cells and subject to endocytic recycling. Required for CPD expression and for correct nuclear auxin response. Mediates cross-talk between the auxin and brassinosteroid pathways. BRX is a target for auxin-induced, proteasome-mediated degradation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q17TI6;Q84JB6;Q9C6S9", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0030154 cell differentiation;GO:0009736 cytokinin-activated signaling pathway;GO:0009734 auxin-activated signaling pathway;GO:0009737 response to abscisic acid;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q17TI5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22152-1", "uniprot_id": "YAB1_ARATH", "mass": 25779.0, "length": 229, "protein_name": "Axial regulator YABBY 1", "gene_name": "AFO; YAB1", "organism": "Arabidopsis", "refseq_name": "Plant-specific transcription factor YABBY family protein", "refseq_ac": "NP_566037", "gene_names_uniprotkb": "AFO; YAB1; ABNORMAL FLORAL ORGANS PROTEIN; ABNORMAL FLORAL ORGANS; AFO; AT; F4L23.30; FILAMENTOUS FLOWER; FIL; YAB1; YABBY1", "gene_names_refseq": "ABNORMAL FLORAL ORGANS PROTEIN; ABNORMAL FLORAL ORGANS; AFO; F4L23.30; FILAMENTOUS FLOWER; FIL; YAB1; YABBY1", "protein_names_uniprotkb": "Axial regulator YABBY 1; Fl-54; Protein ABNORMAL FLORAL ORGANS; Protein FILAMENTOUS FLOWER; Protein antherless", "protein_names_refseq": "Plant-specific transcription factor YABBY family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45190)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10323860;10331982;10457020;10617197;10679447;11092895;11812777;12417699;14555697;15299139;19837869;25527103;27862469;9878633", "class_list": "", "function": "Involved in the abaxial cell fate determination during embryogenesis and organogenesis. Regulates the initiation of embryonic shoot apical meristem (SAM) development (PubMed:10323860, PubMed:10331982, PubMed:10457020, PubMed:11812777, PubMed:12417699, PubMed:19837869, PubMed:9878633, Ref.3, Ref.6). Required during flower formation and development, particularly for the patterning of floral organs. Positive regulator of class B (AP3 and PI) activity in whorls 2 and 3. Negative regulator of class B activity in whorl 1 and of SUP activity in whorl 3. Interacts with class A proteins (AP1, AP2 and LUG) to repress class C (AG) activity in whorls 1 and 2. Contributes to the repression of KNOX genes (STM, KNAT1/BP and KNAT2) to avoid ectopic meristems. Binds DNA without sequence specificity. In vitro, can compete and displace the AP1 protein binding to DNA containing CArG box (PubMed:10323860, PubMed:10331982, PubMed:10457020, PubMed:11812777, PubMed:12417699, PubMed:9878633, Ref.3, Ref.6)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045165 cell fate commitment;GO:0009909 regulation of flower development;GO:0009933 meristem structural organization;GO:0009944 polarity specification of adaxial/abaxial axis;GO:0010093 specification of floral organ identity", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "O22152-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O80860-1", "uniprot_id": "FTSH2_ARATH", "mass": 74157.0, "length": 695, "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "gene_name": "FTSH2; VAR2", "organism": "Arabidopsis", "refseq_name": "FtsH extracellular protease family", "refseq_ac": "NP_001323510", "gene_names_uniprotkb": "FTSH2; VAR2; F7F1.16; F7F1_16; FTSH2; VAR2; VARIEGATED 2", "gene_names_refseq": "F7F1.16; F7F1_16; FTSH2; VAR2; VARIEGATED 2", "protein_names_uniprotkb": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; 3.4.24.-; AtFTSH2; Protein VARIEGATED 2", "protein_names_refseq": "FtsH extracellular protease family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30950)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;10849347;11299370;11717304;11719511;14593172;14630971;14996218;15266057;15918877;16126834;16972866;17714429;18431481;22074104;25561503;27862469", "class_list": "", "function": "Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions, but not involved in thermotolerance., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56Z14;Q94AZ0", "ec_number_list": "", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0008237 metallopeptidase activity;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009579 thylakoid", "go_biological_process": "GO:0006508 proteolysis;GO:0072593 reactive oxygen species metabolic process;GO:0030163 protein catabolic process;GO:0009658 chloroplast organization;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "O80860-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22218-1", "uniprot_id": "ACA4_ARATH", "mass": 112749.0, "length": 1030, "protein_name": "Calcium-transporting ATPase 4, plasma membrane-type", "gene_name": "ACA4", "organism": "Arabidopsis", "refseq_name": "autoinhibited Ca(2+)-ATPase, isoform 4", "refseq_ac": "NP_181687", "gene_names_uniprotkb": "ACA4; T32G6.8; T32G6_8; autoinhibited Ca(2+)-ATPase; isoform 4", "gene_names_refseq": "''autoinhibited Ca(2+)-ATPase; ACA4; T32G6.8; T32G6_8; autoinhibited Ca(2+)-ATPase; isoform 4''; isoform 4", "protein_names_uniprotkb": "Calcium-transporting ATPase 4, plasma membrane-type; 7.2.2.10; Ca(2+)-ATPase isoform 4", "protein_names_refseq": "autoinhibited Ca(2+)-ATPase, isoform 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41560)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11115896;17151019;19376835;21768351;27862469", "class_list": "", "function": "Catalyzes the hydrolysis of ATP coupled with the transport of calcium., [UniProtKB, UniProtKB]; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "7.2.2.10", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0005388 P-type calcium transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole", "go_biological_process": "GO:0055081 monoatomic anion homeostasis;GO:0051480 regulation of cytosolic calcium ion concentration;GO:0042742 defense response to bacterium;GO:0043069 negative regulation of programmed cell death;GO:0009624 response to nematode", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "O22218-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8VY64-1", "uniprot_id": "NFYA4_ARATH", "mass": 22259.0, "length": 198, "protein_name": "Nuclear transcription factor Y subunit A-4", "gene_name": "NF-YA4; NFYA4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "NF-YA4; NFYA4; T29F13.7; T29F13_7; nuclear factor Y; subunit A4", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit A-4; AtNF-YA-4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34720)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11250072;11867211;14593172;25561503;27862469;29654922", "class_list": "", "function": "Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes., [UniProtKB, UniProtKB]; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64585", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0048510 regulation of timing of transition from vegetative to reproductive phase", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VY64-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22133-1", "uniprot_id": "BEN1_ARATH", "mass": 40261.0, "length": 364, "protein_name": "Protein BRI1-5 ENHANCED 1", "gene_name": "BEN1", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": "NP_182064", "gene_names_uniprotkb": "BEN1; BRI1-5 ENHANCED 1; F4L23.9", "gene_names_refseq": "BEN1; BRI1-5 ENHANCED 1; F4L23.9", "protein_names_uniprotkb": "Protein BRI1-5 ENHANCED 1; 1.1.1.-", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45400)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;17521414;23893742;27862469", "class_list": "", "function": "Element of the brassinosteroid metabolic pathway that regulates typhasterol (TY), castasterone (CS) and brassinolide (BL) levels (PubMed:17521414). Involved in the control of organ elongation (PubMed:17521414, PubMed:23893742)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0009646 response to absence of light;GO:0016131 brassinosteroid metabolic process;GO:0010422 regulation of brassinosteroid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O22133-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q0V7X4-1", "uniprot_id": "FIT_ARATH", "mass": 35520.0, "length": 318, "protein_name": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR", "gene_name": "FIT", "organism": "Arabidopsis", "refseq_name": "FER-like regulator of iron uptake", "refseq_ac": "NP_850114", "gene_names_uniprotkb": "FIT; ATBHLH029; ATBHLH29; ATFIT1; BHLH029; BHLH29; EN43; F24D13.5; F24D13_5; FIT1; FRU", "gene_names_refseq": "ARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1; ATBHLH029; ATBHLH29; ATFIT1; BASIC HELIX-LOOP-HELIX PROTEIN 29; BHLH029; F24D13.5; F24D13_5; FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1; FER-like regulator of iron uptake; FIT1; FRU", "protein_names_uniprotkb": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR; AtbHLH29; Basic helix-loop-helix protein 29; FER-LIKE REGULATOR OF IRON UPTAKE; Transcription factor EN 43; Transcription factor Fe-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1; bHLH 29; bHLH transcription factor bHLH029", "protein_names_refseq": "FER-like regulator of iron uptake", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28160)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;12679534;12897250;14600211;15531708;15539473;15556641;16117851;17466530;18397377;27862469", "class_list": "", "function": "Transcription factor. Essential protein involved in iron uptake responses. Regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation. Confers enhanced iron mobilization responses at low iron supply., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S3E9;Q9ZUV8", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010039 response to iron ion;GO:0034756 regulation of iron ion transport", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q0V7X4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P20649-1", "uniprot_id": "PMA1_ARATH", "mass": 104224.0, "length": 949, "protein_name": "ATPase 1, plasma membrane-type", "gene_name": "AHA1; HA1", "organism": "Arabidopsis", "refseq_name": "H[+]-ATPase 1", "refseq_ac": "NP_179486", "gene_names_uniprotkb": "AHA1; HA1; AHA1; F19F24.16; F19F24_16; H(+)-ATPase 1; OPEN STOMATA 2; OST2; PLASMA MEMBRANE PROTON ATPASE; PMA", "gene_names_refseq": "AHA1; F19F24.16; F19F24_16; H(+)-ATPase 1; HA1; OPEN STOMATA 2; OST2; PLASMA MEMBRANE PROTON ATPASE; PMA", "protein_names_uniprotkb": "ATPase 1, plasma membrane-type; 7.1.2.1; PM H(+)-ATPase 1; Plasma membrane-type ATPase 1; Proton pump 1", "protein_names_refseq": "H[+]-ATPase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18960)", "pathway_count": 1, "publication_count": 46, "publication_id_list": "10617197;12182706;14506206;14593172;15308754;15821287;16279950;17317660;17586839;17651370;18433157;18463617;18686298;19245862;19376835;19688752;19900291;20348108;20374526;20466843;21768351;22060019;22438062;23111157;23172892;23328941;23572148;23660473;23776212;23820729;24043427;24858935;24924143;2521951;25267325;25561503;26071421;26091701;26187819;27419465;27862469;28011693;28358053;29167316;30833711;31904040", "class_list": "", "function": "The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport (PubMed:26071421). The resulting external acidification and/or internal alkinization may mediate growth responses (PubMed:26071421). Forms a functional cation-translocating unit with CNGC17 that is activated by PSKR1/BAK1 and possibly other BAK1/RLK complexes (PubMed:26071421). Promotes stomatal opening in response to blue light (PubMed:28358053, PubMed:31904040)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64626", "ec_number_list": "7.1.2.1", "go_molecular_function": "GO:0008553 P-type proton-exporting transporter activity;GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009506 plasmodesma;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0009414 response to water deprivation;GO:0051453 regulation of intracellular pH;GO:1902600 proton transmembrane transport;GO:0120029 proton export across plasma membrane;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 4.7, "record_id": "P20649-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7XHI5-1", "uniprot_id": "BH133_ARATH", "mass": 40060.0, "length": 362, "protein_name": "Transcription factor bHLH133", "gene_name": "BHLH133; UKTF1", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": "NP_001077923", "gene_names_uniprotkb": "BHLH133; UKTF1; T2G17.10; T2G17_10", "gene_names_refseq": "T2G17.10; T2G17_10", "protein_names_uniprotkb": "Transcription factor bHLH133; AtbHLH133; Basic helix-loop-helix protein 133; bHLH 133; bHLH transcription factor bHLH133", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20100)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;12679534;27862469", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56XZ8;Q9SL72", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7XHI5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8LPS5-1", "uniprot_id": "SERK5_ARATH", "mass": 66981.0, "length": 601, "protein_name": "Somatic embryogenesis receptor kinase 5", "gene_name": "SERK5", "organism": "Arabidopsis", "refseq_name": "somatic embryogenesis receptor-like kinase 5", "refseq_ac": "NP_001318220", "gene_names_uniprotkb": "SERK5; ATSERK5; BAK8; BRI1- ASSOCIATED KINASE 8; F13J11.15; F13J11_15", "gene_names_refseq": "ATSERK5; BAK8; BRI1- ASSOCIATED KINASE 8; F13J11.15; F13J11_15; SERK5; SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5; somatic embryogenesis receptor-like kinase 5", "protein_names_uniprotkb": "Somatic embryogenesis receptor kinase 5; 2.7.11.1; AtSERK5; Somatic embryogenesis receptor-like kinase 5", "protein_names_refseq": "somatic embryogenesis receptor-like kinase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G13800)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11523644;14593172;19105183;20064227;23921992;27862469", "class_list": "", "function": "Serine/threonine-kinase of unknown function., [UniProtKB]", "predicted_glycosites": 7, "predicted_n_glycosites": 6, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "C0LGK2;Q9SKG4", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity;GO:0004674 protein serine/threonine kinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0009626 plant-type hypersensitive response;GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LPS5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22286-1", "uniprot_id": "BPM3_ARATH", "mass": 44890.0, "length": 408, "protein_name": "BTB/POZ and MATH domain-containing protein 3", "gene_name": "BPM3", "organism": "Arabidopsis", "refseq_name": "BTB/POZ/MATH-domains containing protein", "refseq_ac": "NP_001031516", "gene_names_uniprotkb": "BPM3; ATBPM3; T5I7.6; T5I7_6", "gene_names_refseq": "ATBPM3; BPM3; T5I7.6; T5I7_6", "protein_names_uniprotkb": "BTB/POZ and MATH domain-containing protein 3; AtBPM3; Protein BTB-POZ AND MATH DOMAIN 3", "protein_names_refseq": "BTB/POZ/MATH-domains containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;14693377;15618422;15772280;19423640;19843165;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2V416;Q8L977", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0016567 protein ubiquitination;GO:0071472 cellular response to salt stress;GO:0031396 regulation of protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "O22286-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8L9Y3-1", "uniprot_id": "ARR14_ARATH", "mass": 43099.0, "length": 382, "protein_name": "Two-component response regulator ARR14", "gene_name": "ARR14; RR14", "organism": "Arabidopsis", "refseq_name": "response regulator 14", "refseq_ac": "NP_178285", "gene_names_uniprotkb": "ARR14; RR14; ARR14; T8O11.7; T8O11_7; response regulator 14", "gene_names_refseq": "ARR14; RR14; T8O11.7; T8O11_7; response regulator 14", "protein_names_uniprotkb": "Two-component response regulator ARR14", "protein_names_refseq": "response regulator 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G01760)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;15173562;27862469", "class_list": "", "function": "Transcriptional activator that binds specific DNA sequence., [UniProtKB, UniProtKB]; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZUA4", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000156 phosphorelay response regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009736 cytokinin-activated signaling pathway;GO:0000160 phosphorelay signal transduction system", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8L9Y3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22833-1", "uniprot_id": "LRK54_ARATH", "mass": 73906.0, "length": 658, "protein_name": "L-type lectin-domain containing receptor kinase V.4", "gene_name": "LECRK-V4; LECRK54", "organism": "Arabidopsis", "refseq_name": "Concanavalin A-like lectin protein kinase family protein", "refseq_ac": "NP_181898", "gene_names_uniprotkb": "LECRK-V4; LECRK54; F18O19.19; LECRKC1; LecRK-V.4", "gene_names_refseq": "F18O19.19; L-type lectin receptor kinase V.4; LecRK-V.4", "protein_names_uniprotkb": "L-type lectin-domain containing receptor kinase V.4; 2.7.11.1; Arabidopsis thaliana lectin-receptor kinase c1; AthlecRK-c1; LecRK-V.4", "protein_names_refseq": "Concanavalin A-like lectin protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10350082;10617197;14593172;19773388;25083911;27862469", "class_list": "", "function": "Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0030246 carbohydrate binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity;GO:0004674 protein serine/threonine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0002229 defense response to oomycetes", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "O22833-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O82312-1", "uniprot_id": "PAPS2_ARATH", "mass": 90968.0, "length": 800, "protein_name": "Nuclear poly(A) polymerase 2", "gene_name": "PAPS2", "organism": "Arabidopsis", "refseq_name": "poly(A) polymerase 2", "refseq_ac": "NP_001031417", "gene_names_uniprotkb": "PAPS2; F17H15.12; F17H15_12; poly(A) polymerase 2", "gene_names_refseq": "F17H15.12; F17H15_12; PAPS2; poly(A) polymerase 2", "protein_names_uniprotkb": "Nuclear poly(A) polymerase 2; 2.7.7.19; PAP(II); Poly(A) polymerase II; Polynucleotide adenylyltransferase 2", "protein_names_refseq": "poly(A) polymerase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;10872823;14593172;15297145;18479511;19956626;27862469", "class_list": "", "function": "Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity). Mediates the polyadenylation of RNAs that are associated with polynucleotide phosphorylase (e.g. PNP1) (PubMed:10872823)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4ISP7;F4ISP8;F4ISP9;Q94BP6;Q9LKX0", "ec_number_list": "2.7.7.19", "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:1990817 poly(A) RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006397 mRNA processing;GO:0031123 RNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "O82312-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O04196-1", "uniprot_id": "ISOA1_ARATH", "mass": 89481.0, "length": 783, "protein_name": "Isoamylase 1, chloroplastic", "gene_name": "ISA1", "organism": "Arabidopsis", "refseq_name": "isoamylase 1", "refseq_ac": "NP_181522", "gene_names_uniprotkb": "ISA1; ATISA1; RGV3; T28M21.9; T28M21_9; isoamylase 1", "gene_names_refseq": "ARABIDOPSIS THALIANA ISOAMYLASE 1; ATISA1; ISA1; T28M21.9; T28M21_9; isoamylase 1", "protein_names_uniprotkb": "Isoamylase 1, chloroplastic; 3.2.1.68; AtISA1; Protein REDUCED GRAVITROPIC 3", "protein_names_refseq": "isoamylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39930)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;15743447;15849301;18431481;18815382;19074683;27862469;34367195", "class_list": "", "function": "Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches. Promotes negative gravitropic responses in shoots by facilitating starch granules (statoliths) formation in hypocotyls (PubMed:34367195)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0019156 isoamylase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0010368 chloroplast isoamylase complex", "go_biological_process": "GO:0005983 starch catabolic process;GO:0010021 amylopectin biosynthetic process;GO:0019252 starch biosynthetic process;GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "O04196-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q06BH3-1", "uniprot_id": "SRF1_ARATH", "mass": 84824.0, "length": 775, "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 1", "gene_name": "SRF1", "organism": "Arabidopsis", "refseq_name": "STRUBBELIG-receptor family 1", "refseq_ac": "NP_565489", "gene_names_uniprotkb": "SRF1; F5H14.18; F5H14_18; STRUBBELIG-receptor family 1", "gene_names_refseq": "F5H14.18; F5H14_18; SRF1; STRUBBELIG-receptor family 1", "protein_names_uniprotkb": "Protein STRUBBELIG-RECEPTOR FAMILY 1; Leucine-rich repeat receptor kinase-like protein SRF1", "protein_names_refseq": "STRUBBELIG-receptor family 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20850)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;17027738;17317660;17397538;17651370;25561503;27862469", "class_list": "", "function": "Not essential for epidermal patterning and not redundant with STRUBBELIG., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 5, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q06BH2;Q06BH4;Q93ZY8;Q9MAS2", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q06BH3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22213-1", "uniprot_id": "CKX1_ARATH", "mass": 64924.0, "length": 575, "protein_name": "Cytokinin dehydrogenase 1", "gene_name": "CKX1", "organism": "Arabidopsis", "refseq_name": "cytokinin oxidase/dehydrogenase 1", "refseq_ac": "NP_001318403", "gene_names_uniprotkb": "CKX1; ATCKX1; T32G6.3; T32G6_3", "gene_names_refseq": "ATCKX1; CKX1; CYTOKININ OXIDASE/DEHYDROGENASE 1; T32G6.3; T32G6_3; cytokinin oxidase/dehydrogenase 1", "protein_names_uniprotkb": "Cytokinin dehydrogenase 1; 1.5.99.12; AtCKX1; CKO 1; Cytokinin oxidase 1", "protein_names_refseq": "cytokinin oxidase/dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41510)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11504909;12721786;14555694;20825956;22074104;27862469;34329421;35995110", "class_list": "", "function": "Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group (PubMed:11504909, PubMed:14555694). Catalyzes in vitro the oxidation of various types of cytokinin nucleotides that are known as direct products of cytokinin biosynthesis (PubMed:20825956). Promotes adventitious root initiation downstream of MYC2-dependent jasmonate signaling (PubMed:34329421). Cytokinin degraded by CKX1 is required for cell division in the female gametophyte by modulating the expression of cell cycle genes (PubMed:35995110)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "1.5.99.12", "go_molecular_function": "GO:0071949 FAD binding;GO:0016491 oxidoreductase activity;GO:0019139 cytokinin dehydrogenase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005773 vacuole", "go_biological_process": "GO:0009823 cytokinin catabolic process;GO:0048507 meristem development;GO:0009690 cytokinin metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "O22213-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22854-1", "uniprot_id": "ETFD_ARATH", "mass": 70128.0, "length": 633, "protein_name": "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial", "gene_name": "ETFQO", "organism": "Arabidopsis", "refseq_name": "electron-transfer flavoprotein:ubiquinone oxidoreductase", "refseq_ac": "NP_181868", "gene_names_uniprotkb": "ETFQO; T1O24.14; T1O24", "gene_names_refseq": "ETFQO; T1O24.14; electron-transfer flavoprotein:ubiquinone oxidoreductase", "protein_names_uniprotkb": "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; 1.5.5.1; ETF-QO; ETF-ubiquinone oxidoreductase", "protein_names_refseq": "electron-transfer flavoprotein:ubiquinone oxidoreductase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43400)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14993207;16055629;20501910;27862469;29348240", "class_list": "", "function": "Accepts electrons from ETF and reduces ubiquinone., [UniProtKB, UniProtKB]; Links fatty acid beta-oxidation and amino acid catabolism to the respiratory chain by transferring electrons from the electron transfer flavoprotein (ETF) to ubiquinone. May act downstream of IVD and D2HGDH in the degradation of phytol or chlorophyll during dark-induced senescence and sugar starvation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "1.5.5.1", "go_molecular_function": "GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0004174 electron-transferring-flavoprotein dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006552 L-leucine catabolic process;GO:0022900 electron transport chain;GO:0010230 alternative respiration;GO:0009646 response to absence of light", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "O22854-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P93831-1", "uniprot_id": "CLF_ARATH", "mass": 100370.0, "length": 902, "protein_name": "Histone-lysine N-methyltransferase CLF", "gene_name": "CLF", "organism": "Arabidopsis", "refseq_name": "SET domain-containing protein", "refseq_ac": "NP_179919", "gene_names_uniprotkb": "CLF; CURLY LEAF; F26B6.3; F26B6_3; ICU1; INCURVATA 1; PIF1; PIF2; SDG1; SET1; SETDOMAIN 1; SETDOMAIN GROUP 1", "gene_names_refseq": "CLF; CURLY LEAF; F26B6.3; F26B6_3; ICU1; INCURVATA 1; SDG1; SET1; SETDOMAIN 1; SETDOMAIN GROUP 1", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase CLF; 2.1.1.-; Polycomb group protein CURLY LEAF; Protein INCURVATA 1; Protein SET DOMAIN GROUP 1; Protein photoperiod insensitive flowering", "protein_names_refseq": "SET domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G23380)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;11063708;11250158;11691919;14871310;17881378;19097900;20647345;23660473;26642436;27862469;28428341;30307069;33170267;35394700;9052779;9736998", "class_list": "", "function": "Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes, mainly abscisic acid (ABA) responsive elements (PubMed:17881378, PubMed:30307069). Required to regulate floral development by repressing the AGAMOUS homeotic gene in leaves, inflorescence stems and flowers (PubMed:17881378). Together with ATX1, modulates AG nucleosome methylation statement (PubMed:17881378). Regulates the antero-posterior organization of the endosperm, as well as the division and elongation rates of leaf cells. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Forms a nuclear complex with EZA1/SWN and HXK1 to target common glucose-responsive genes and regulate glucose signaling by glucose-mediated gene repression (PubMed:35394700). Affects the recruitment of HXK1 to the target chromatin (PubMed:35394700)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80455", "ec_number_list": "2.1.1.-;2.1.1.356", "go_molecular_function": "GO:0003682 chromatin binding;GO:0003727 single-stranded RNA binding;GO:0046976 histone H3K27 methyltransferase activity;GO:0001222 transcription corepressor binding;GO:0140951 histone H3K27 trimethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031519 PcG protein complex", "go_biological_process": "GO:0030154 cell differentiation;GO:0006355 regulation of DNA-templated transcription;GO:0045815 transcription initiation-coupled chromatin remodeling;GO:0045814 negative regulation of gene expression, epigenetic;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "P93831-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q0WVM4-1", "uniprot_id": "CIK2_ARATH", "mass": 69694.0, "length": 634, "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 2", "gene_name": "CIK2; CLERK", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_179973", "gene_names_uniprotkb": "CIK2; CLERK; CLERK; T29E15.15; T29E15_15", "gene_names_refseq": "T29E15.15; T29E15_15", "protein_names_uniprotkb": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 2; 2.7.11.1; LRR receptor-like serine/threonine-protein kinase CIK2; Protein CLE-RESISTANT RECEPTOR KINASE", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G23950)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;20064227;27862469;29581511;29789310;33909893;34651321;34935965", "class_list": "", "function": "Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS (PubMed:29581511, PubMed:29789310, PubMed:34651321). Required for full sensing of root-active CLE peptides (e.g. CLV3, CLE26, CLE45) in early developing protophloem (PubMed:29789310)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O82223;Q570Q6", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0015026 coreceptor activity;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:1901653 cellular response to peptide;GO:0010088 phloem development;GO:0048653 anther development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WVM4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22898-1", "uniprot_id": "LACS1_ARATH", "mass": 74598.0, "length": 660, "protein_name": "Long chain acyl-CoA synthetase 1", "gene_name": "LACS1", "organism": "Arabidopsis", "refseq_name": "AMP-dependent synthetase and ligase family protein", "refseq_ac": "NP_001031554", "gene_names_uniprotkb": "LACS1; CER8; ECERIFERUM 8; LONG-CHAIN ACYL-COA SYNTHASE 1; T8I13.8", "gene_names_refseq": "CER8; ECERIFERUM 8; LACS1; LONG-CHAIN ACYL-COA SYNTHASE 1; T8I13.8", "protein_names_uniprotkb": "Long chain acyl-CoA synthetase 1; 6.2.1.3; Protein ECERIFERUM 8", "protein_names_refseq": "AMP-dependent synthetase and ligase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47240)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;12177484;12228482;12805634;14593172;18463617;19392700;19423640;20237894;24924143;27862469", "class_list": "", "function": "Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in both the wax and cutin pathways. Preferentially uses palmitate, palmitoleate, linoleate and eicosenoate. Seems to have a specific activity against very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24))., [UniProtKB, PubMed, PubMed, PubMed]; Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WP3;Q56ZG8", "ec_number_list": "6.2.1.3", "go_molecular_function": "GO:0005524 ATP binding;GO:0004467 long-chain fatty acid-CoA ligase activity;GO:0031957 very long-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0010025 wax biosynthetic process;GO:0010143 cutin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "O22898-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P43254-1", "uniprot_id": "COP1_ARATH", "mass": 76188.0, "length": 675, "protein_name": "E3 ubiquitin-protein ligase COP1", "gene_name": "COP1", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": "NP_180854", "gene_names_uniprotkb": "COP1; ATCOP1; DEETIOLATED MUTANT 340; DET340; EMB168; EMBRYO DEFECTIVE 168; FUS1; FUSCA 1; T21L14.11; T21L14_11", "gene_names_refseq": "ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1; ATCOP1; CONSTITUTIVE PHOTOMORPHOGENIC 1; COP1; DEETIOLATED MUTANT 340; DET340; EMB168; EMBRYO DEFECTIVE 168; FUS1; FUSCA 1; T21L14.11; T21L14_11", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase COP1; 2.3.2.27; Constitutive photomorphogenesis protein 1; RING-type E3 ubiquitin transferase COP1", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32950)", "pathway_count": 1, "publication_count": 36, "publication_id_list": "10072396;10480941;10488108;10617197;10839542;11226162;11461903;11967090;12023303;12827204;12887588;1423630;14597662;15308756;15342494;18223036;18722184;19165148;20624951;21454788;23776212;25561503;26474641;26714275;27041596;27862469;28011693;28584104;28735869;31732705;32061894;7753789;8205001;9668129;9744100;9755158", "class_list": "", "function": "E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Mediates the ubiquitination-dependent degradation of HY5 in the darkness during seedling development (e.g. hypocotyl growth) (PubMed:26474641). Represses CIP7 in darkness (PubMed:9668129). Triggers ubiquitination and subsequent protein degradation of UNE10/PIF8, PCH1 and PCHL in the dark (PubMed:31732705)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23974;O23975;O48770;Q1JPL6", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016604 nuclear body;GO:0000152 nuclear ubiquitin ligase complex;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0009649 entrainment of circadian clock;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 3.7, "record_id": "P43254-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9ZQR3-1", "uniprot_id": "Y2451_ARATH", "mass": 97635.0, "length": 868, "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510", "gene_name": "T13P21.11; T13P21_11", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "T13P21.11; T13P21_11", "gene_names_refseq": "", "protein_names_uniprotkb": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G14510)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 9, "predicted_n_glycosites": 9, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9ZQR3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O04294-1", "uniprot_id": "IMPA3_ARATH", "mass": 58616.0, "length": 531, "protein_name": "Importin subunit alpha-3", "gene_name": "IMPA3; MOS6", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": "NP_192124", "gene_names_uniprotkb": "IMPA3; MOS6; 6; ATIMPALPHA3; IMPA-3; IMPORTIN ALPHA 3; IMPORTIN ALPHA ISOFORM 3; KAP2; MODIFIER OF SNC1; MOS6; T10M13.16; T10M13_16", "gene_names_refseq": "6; ATIMPALPHA3; IMPA-3; IMPORTIN ALPHA 3; IMPORTIN ALPHA ISOFORM 3; MODIFIER OF SNC1; MOS6; T10M13.16; T10M13_16", "protein_names_uniprotkb": "Importin subunit alpha-3; IMPa-3; KAP-alpha-2; Karyopherin subunit alpha-2; Protein MODIFIER OF SNC1 6", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02150)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;15964279;18836040;27862469;9765207", "class_list": "", "function": "Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). Acts as a cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040). May be involved in the regulation of pathogen-induced salicylic acid accumulation (PubMed:15964279)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04255;O49601;Q4JHM3;Q94F55", "ec_number_list": "", "go_molecular_function": "GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0042564 NLS-dependent protein nuclear import complex", "go_biological_process": "GO:0006952 defense response;GO:0006607 NLS-bearing protein import into nucleus;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "O04294-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q93VK8-1", "uniprot_id": "GLV1_ARATH", "mass": 9541.0, "length": 86, "protein_name": "Protein GOLVEN 1", "gene_name": "GLV1; RGF6", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor", "refseq_ac": "NP_567503", "gene_names_uniprotkb": "GLV1; RGF6; CLE-like 6; CLEL 6; CLEL6; FCAALL; GLV1; GOLVEN 1; RGF6; root meristem growth factor 6", "gene_names_refseq": "CLE-like 6; CLEL 6; GLV1; GOLVEN 1; RGF6; root meristem growth factor 6", "protein_names_uniprotkb": "Protein GOLVEN 1; AtRGF6; CLAVATA3/ESR (CLE)-related protein CLEL6; CLE-Like protein 6; Root meristem growth factor 6", "protein_names_refseq": "root meristem growth factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16515)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;20798316;22307643;22421050;23370719;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (PubMed:22307643, PubMed:23370719). Also involved in the regulation of hypocotyl bending and root gravitropism in a PIN2-traffic dependent manner, thus influencing the formation of auxin gradients (PubMed:22421050). Maintains the postembryonic root stem cell niche (PubMed:20798316)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008284 positive regulation of cell population proliferation;GO:0030154 cell differentiation;GO:0032880 regulation of protein localization;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93VK8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P17839-1", "uniprot_id": "AG_ARATH", "mass": 28723.0, "length": 252, "protein_name": "Floral homeotic protein AGAMOUS", "gene_name": "AG", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_567569", "gene_names_uniprotkb": "AG; AGAMOUS PROTEIN; AGAMOUS; F13C5.130; F13C5_130", "gene_names_refseq": "AGAMOUS PROTEIN; AGAMOUS; AG; F13C5.130; F13C5_130", "protein_names_uniprotkb": "Floral homeotic protein AGAMOUS", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18960)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10198637;10617198;11058164;11689012;15254538;15805477;1675158;17794879;18281509;1973265;19783648;19956801;27862469;7913881;8643482;9418042;9783581", "class_list": "", "function": "Probable transcription factor involved in the control of organ identity during the early development of flowers. Is required for normal development of stamens and carpels in the wild-type flower. Plays a role in maintaining the determinacy of the floral meristem. Acts as C class cadastral protein by repressing the A class floral homeotic genes like APETALA1. Forms a heterodimer via the K-box domain with either SEPALATTA1/AGL2, SEPALATTA2/AGL4, SEPALLATA3/AGL9 or AGL6 that could be involved in genes regulation during floral meristem development. Controls AHL21/GIK, a multifunctional chromatin modifier in reproductive organ patterning and differentiation (PubMed:19956801). Induces microsporogenesis through the activation of SPL/NZZ (PubMed:15254538)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82732", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "P17839-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O22763-1", "uniprot_id": "BZP10_ARATH", "mass": 45358.0, "length": 411, "protein_name": "Basic leucine zipper 10", "gene_name": "BZIP10; BZO2H1", "organism": "Arabidopsis", "refseq_name": "bZIP transcription factor family protein", "refseq_ac": "NP_001329303", "gene_names_uniprotkb": "BZIP10; BZO2H1; ATBZIP10; BZO2H1; T10P11.9", "gene_names_refseq": "ATBZIP10; Arabidopsis thaliana basic leucine zipper 10; BZO2H1", "protein_names_uniprotkb": "Basic leucine zipper 10; AtbZIP10; Basic leucine zipper O2 homolog 1; Basic leucine zipper OPAQUE 2 homolog 1; bZIP protein 10", "protein_names_refseq": "bZIP transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02640)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10617198;11906833;12569427;12657652;14593172;16709202;16810321;16957775;17317660;18841482;19261733;19423640;19531597;20080816;23111157;23328941;23660473;23776212;27862469;30833711", "class_list": "", "function": "Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2B4;Q8RXJ3;Q9FUD4", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:0045735 nutrient reservoir activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009626 plant-type hypersensitive response;GO:2000693 positive regulation of seed maturation;GO:0002240 response to molecule of oomycetes origin", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "O22763-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8GY55-1", "uniprot_id": "TIF4B_ARATH", "mass": 34849.0, "length": 315, "protein_name": "Protein TIFY 4B", "gene_name": "PPD2; TIFY4B", "organism": "Arabidopsis", "refseq_name": "TIFY domain/Divergent CCT motif family protein", "refseq_ac": "NP_193208", "gene_names_uniprotkb": "PPD2; TIFY4B; DL3400C; FCAALL.297; PEAPOD 2; PPD2; TIFY4B; dl3400c", "gene_names_refseq": "DL3400C; FCAALL.297; PEAPOD 2; PPD2; TIFY4B", "protein_names_uniprotkb": "Protein TIFY 4B; Protein PEAPOD 2", "protein_names_refseq": "TIFY domain/Divergent CCT motif family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14720)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11910074;16916932;19253305;20360743;23572148;27862469;9461215", "class_list": "", "function": "Regulates the arrest of dispersed meristematic cells during lamina development., [UniProtKB, PubMed]; Repressor of jasmonate responses., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23328", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:0048366 leaf development;GO:1901371 regulation of leaf morphogenesis;GO:2000022 regulation of jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GY55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q38836-1", "uniprot_id": "AGL11_ARATH", "mass": 26184.0, "length": 230, "protein_name": "Agamous-like MADS-box protein AGL11", "gene_name": "AGL11; STK", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_192734", "gene_names_uniprotkb": "AGL11; STK; AGAMOUS-like 11; AGL11; SEEDSTICK; STK; T5L19.90; T5L19_90", "gene_names_refseq": "AGAMOUS-like 11; AGL11; SEEDSTICK; STK; T5L19.90; T5L19_90", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL11; Protein SEEDSTICK", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G09960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;15805477;22176531;27862469;28154133;7549482", "class_list": "", "function": "Probable transcription factor (Probable). Is required, together with TT16/AGL32 for the maternal control of endothelium formation, which is essential for female gametophyte development and fertilization, and seed formation (PubMed:22176531)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 3, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 3, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 3, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZ36", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0090397 stigma papilla", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q38836-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O23078-1", "uniprot_id": "PLDB2_ARATH", "mass": 104155.0, "length": 927, "protein_name": "Phospholipase D beta 2", "gene_name": "PLDBETA2", "organism": "Arabidopsis", "refseq_name": "phospholipase D beta 2", "refseq_ac": "NP_567160", "gene_names_uniprotkb": "PLDBETA2; A_IG005I10.13; F5I10.13; phospholipase D beta 2", "gene_names_refseq": "F5I10.13; PLDBETA2; phospholipase D beta 2", "protein_names_uniprotkb": "Phospholipase D beta 2; 3.1.4.4; AtPLDbeta2; PLD beta 2; PLDdelta1", "protein_names_refseq": "phospholipase D beta 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00240)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10198096;10617198;11891260;16384909;27862469", "class_list": "", "function": "Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Can use phosphatidylserine or N-acylphosphatidylethanolamine as substrates., [UniProtKB]; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JH27", "ec_number_list": "3.1.4.4", "go_molecular_function": "GO:0004630 phospholipase D activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009395 phospholipid catabolic process;GO:0046470 phosphatidylcholine metabolic process;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O23078-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q946J8-1", "uniprot_id": "LHP1_ARATH", "mass": 48644.0, "length": 445, "protein_name": "Chromo domain-containing protein LHP1", "gene_name": "LHP1; TFL2", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": "NP_197271", "gene_names_uniprotkb": "LHP1; TFL2; AtLHP1; LHP1; LIKE HETEROCHROMATIN PROTEIN 1; MVA3.4; MVA3_4; TERMINAL FLOWER 2; TFL2; TU8", "gene_names_refseq": "AtLHP1; LHP1; LIKE HETEROCHROMATIN PROTEIN 1; MVA3.4; MVA3_4; TERMINAL FLOWER 2; TFL2", "protein_names_uniprotkb": "Chromo domain-containing protein LHP1; Protein LIKE HETEROCHROMATIN PROTEIN 1; Protein TERMINAL FLOWER 2", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17690)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "11130714;11731464;11898023;12826620;15356387;15546353;16244868;16361394;16549797;16682972;19097900;19947980;20466843;21304947;21596687;21768351;23572148;23660473;25561503;26538092;27495811;27862469;28428341;29314758;30833711;9405937;9611176", "class_list": "", "function": "Structural component of heterochromatin involved in gene repression, including several floral homeotic genes and FLT that regulates flowering time (PubMed:9611176). Required for maintenance of vernalization-induced repression of FLC. As part of the PRC1-like complex, recognizes and binds histone H3 tails methylated at 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me), leading to epigenetic repression. PcG PRC1 complex maintains the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones, rendering chromatin heritably changed in its expressibility. Transcriptional repressor that binds DNA on GAGA-like motif and 5'-(A/G/T)AACCCTA(A/G)-3' consensus motif in the promoters of target genes. Recognizes and binds histone H3 tails methylated at 'Lys-27' (H3K27me) but depleted in active histone marks such as H3K4me, leading to epigenetic repression. When in complex with LHP1, recognizes and binds histone H3 tails methylated at 'Lys-4' (H3K4me) and 'Lys-27' (H3K27me), mostly corresponding to stress-responsive genes (PubMed:27495811)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FN82", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003723 RNA binding;GO:0042802 identical protein binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000791 euchromatin;GO:0000792 heterochromatin;GO:0009507 chloroplast", "go_biological_process": "GO:0009825 multidimensional cell growth;GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0045892 negative regulation of DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q946J8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6S7B0-1", "uniprot_id": "TAF5_ARATH", "mass": 74414.0, "length": 669, "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "organism": "Arabidopsis", "refseq_name": "TBP-associated factor 5", "refseq_ac": "NP_197897", "gene_names_uniprotkb": "TAF5; F21J6.5; F21J6; TBP-associated factor 5", "gene_names_refseq": "F21J6.5; TAF5; TBP-associated factor 5", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 5; AtTAF5; TBP-associated factor 5", "protein_names_refseq": "TBP-associated factor 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25150)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;15527982;17340043;18463617;20466843;23572148;23660473;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005669 transcription factor TFIID complex;GO:0000124 SAGA complex", "go_biological_process": "GO:0006367 transcription initiation at RNA polymerase II promoter;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q6S7B0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9XF67-1", "uniprot_id": "PDPK1_ARATH", "mass": 54711.0, "length": 491, "protein_name": "3-phosphoinositide-dependent protein kinase 1", "gene_name": "PDK1; PDPK1", "organism": "Arabidopsis", "refseq_name": "3'-phosphoinositide-dependent protein kinase 1", "refseq_ac": "NP_568138", "gene_names_uniprotkb": "PDK1; PDPK1; ATPDK1; PDK1; T32M21.110; T32M21_110", "gene_names_refseq": "3'-phosphoinositide-dependent protein kinase 1; 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1; ATPDK1; PDK1; T32M21.110; T32M21_110", "protein_names_uniprotkb": "3-phosphoinositide-dependent protein kinase 1; 2.7.11.1; AtPDK1", "protein_names_refseq": "3'-phosphoinositide-dependent protein kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04510)", "pathway_count": 1, "publication_count": 32, "publication_id_list": "10371193;11130714;13678909;14593172;14749726;15358101;16125835;16377759;16601102;16973627;17040918;18463617;19245862;19376835;20466843;21768351;22440515;22631563;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27419465;27862469;28011693;29167316;30833711", "class_list": "", "function": "May couple lipid signals to the activation-loop phosphorylation of several protein kinases of the so-called AGC kinase family. Interacts via its pleckstrin homology domain with phosphatidic acid, PtdIns3P and PtdIns(3,4)P2 and to a lesser extent with PtdIns(4,5)P2 and PtdIns4P. May play a general role in signaling processes controlling the pathogen/stress response, polar auxin transport and development. Transphosphorylates the AGC protein kinases OXI1/AGC2-1, PK1/S6K1, PK19/S6K2 and PID resulting in their activation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ74", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0030295 protein kinase activator activity;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "Q9XF67-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P48007-1", "uniprot_id": "PIST_ARATH", "mass": 24047.0, "length": 208, "protein_name": "Floral homeotic protein PISTILLATA", "gene_name": "PI", "organism": "Arabidopsis", "refseq_name": "K-box region and MADS-box transcription factor family protein", "refseq_ac": "NP_197524", "gene_names_uniprotkb": "PI; F5O24.130; F5O24_130; PISTILLATA", "gene_names_refseq": "F5O24.130; F5O24_130; FLORAL HOMEOTIC PROTEIN PISTILLATA; PISTILLATA; PI", "protein_names_uniprotkb": "Floral homeotic protein PISTILLATA; Transcription factor PI", "protein_names_refseq": "K-box region and MADS-box transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20240)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10769227;11130714;11206550;11283333;18417639;19783648;27862469;7958839;8565821;8643482;9489703;9927474", "class_list": "", "function": "Probable transcription factor involved in the genetic control of flower development. Is required for normal development of petals and stamens in the wild-type flower. Forms a heterodimer with APETALA3 that is required for autoregulation of both AP3 and PI genes. AP3/PI heterodimer interacts with APETALA1 or SEPALLATA3 to form a ternary complex that could be responsible for the regulation of the genes involved in the flower development. AP3/PI heterodimer activates the expression of NAP. AP3/PI prevents GATA22/GNL and GATA21/GNC expression (PubMed:18417639)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SQ07;Q9SQ08;Q9SQ09;Q9SQ10;Q9SQ11;Q9SQ12;Q9SQ13", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010093 specification of floral organ identity", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "P48007-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KIX0-1", "uniprot_id": "JMJ13_ARATH", "mass": 88821.0, "length": 787, "protein_name": "Lysine-specific demethylase JMJ13", "gene_name": "JMJ13", "organism": "Arabidopsis", "refseq_name": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "refseq_ac": "NP_199502", "gene_names_uniprotkb": "JMJ13; MQD22.4; MQD22_4", "gene_names_refseq": "MQD22.4; MQD22_4", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ13; 1.14.11.-; AtJMJ13; Jumonji domain-containing protein 13; Lysine-specific histone demethylase JMJ13; Protein JUMONJI 13; [histone H3]-trimethyl-L-lysine(27) monodemethylase JMJ13", "protein_names_refseq": "Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46910)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;18713399;27862469;30899015;9734815", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3 with a specific activity for H3K27me3 and involved in the regulation of gene expression (PubMed:30899015). Acts as a temperature and photoperiod dependent flowering repressor (PubMed:30899015)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJS0", "ec_number_list": "1.14.11.-;1.14.11.68", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042393 histone binding;GO:0032452 histone demethylase activity;GO:0071558 histone H3K27me2/H3K27me3 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009266 response to temperature stimulus;GO:0048571 long-day photoperiodism", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4KIX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9C5H5-1", "uniprot_id": "M3K5G_ARATH", "mass": 79319.0, "length": 716, "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAPKKK5", "organism": "Arabidopsis", "refseq_name": "mitogen-activated protein kinase kinase kinase 5", "refseq_ac": "NP_569040", "gene_names_uniprotkb": "MAPKKK5; MAP3KG; MUD21.11; MUD21_11", "gene_names_refseq": "MAPKKK5; MUD21.11; MUD21_11; mitogen-activated protein kinase kinase kinase 5", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase kinase 5; 2.7.11.25; AtMAP3Kgamma; MAP3K gamma protein kinase", "protein_names_refseq": "mitogen-activated protein kinase kinase kinase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66850)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10095117;10375615;11130714;14593172;23111157;23660473;25561503;27679653;27862469;28011693;29440595;29871986;9679202", "class_list": "", "function": "Mitogen-activated protein kinase (MAPK) involved in the transduction of signal between the host cell surface chitin receptor complex CERK1-LYK5 and the intracellular MAPK cascade that leads to chitin-induced immunity. Phosphorylates and activates MAPK targets (e.g. MKK4, MKK5, and possibly MKK2) when phosphorylated by PBL27 after elicitation by chitin. Required for resistance to the fungus A.brassicicola., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 19, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23721;Q0WLS6;Q93ZH4;Q9FKZ5", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004709 MAP kinase kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0002221 pattern recognition receptor signaling pathway;GO:0000165 MAPK cascade;GO:0046777 protein autophosphorylation;GO:0050832 defense response to fungus;GO:0045088 regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9C5H5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K5T2-1", "uniprot_id": "CGL_ARATH", "mass": 34326.0, "length": 323, "protein_name": "Bifunctional cystathionine gamma-lyase/cysteine synthase", "gene_name": "DES1", "organism": "Arabidopsis", "refseq_name": "L-cysteine desulfhydrase 1", "refseq_ac": "NP_001330587", "gene_names_uniprotkb": "DES1; F15F15.100; F15F15_100; L-cysteine desulfhydrase 1", "gene_names_refseq": "DES1; F15F15.100; F15F15_100; L-cysteine desulfhydrase 1", "protein_names_uniprotkb": "Bifunctional cystathionine gamma-lyase/cysteine synthase; 2.5.1.47; 3; 4.4.1.1; ARAth-Bsas4; Beta-substituted Ala synthase 4; DES1; L-cysteine desulfhydrase 1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE", "protein_names_refseq": "L-cysteine desulfhydrase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G28030)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10889265;11130714;16307301;18024555;18223034;19955263;21988475;23428891;27862469", "class_list": "", "function": "Involved in maintaining Cys homeostasis through the desulfuration of L-cysteine. Modulates the generation of the signaling molecule sulfide in plant cytosol. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "4.4.1.1;2.5.1.47;4.4.1.9", "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004123 cystathionine gamma-lyase activity;GO:0080146 L-cysteine desulfhydrase activity;GO:0004124 cysteine synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006535 cysteine biosynthetic process from serine;GO:1990170 stress response to cadmium ion;GO:0080145 intracellular cysteine homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4K5T2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KGQ0-1", "uniprot_id": "ALFC4_ARATH", "mass": 42906.0, "length": 393, "protein_name": "Fructose-bisphosphate aldolase 4, cytosolic", "gene_name": "FBA4", "organism": "Arabidopsis", "refseq_name": "Aldolase superfamily protein", "refseq_ac": "NP_568127", "gene_names_uniprotkb": "FBA4; AtFBA4; F17C15.110; F17C15_110", "gene_names_refseq": "AtFBA4; F17C15.110; F17C15_110; FBA4; fructose-bisphosphate aldolase 4", "protein_names_uniprotkb": "Fructose-bisphosphate aldolase 4, cytosolic; 4.1.2.13; AtFBA4; Cytosolic aldolase 3; cAld3", "protein_names_refseq": "Aldolase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03690)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;14593172;18463617;20466843;22561114;22631563;23328941;23572148;25561503;26091701;27862469;30833711", "class_list": "", "function": "Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LET3;Q8W4G8;Q9LZR9", "ec_number_list": "4.1.2.13", "go_molecular_function": "GO:0003729 mRNA binding;GO:0004332 fructose-bisphosphate aldolase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006094 gluconeogenesis;GO:0006096 glycolytic process;GO:0030388 fructose 1,6-bisphosphate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4KGQ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K1J4-1", "uniprot_id": "ATXR7_ARATH", "mass": 158663.0, "length": 1423, "protein_name": "Histone-lysine N-methyltransferase ATXR7", "gene_name": "ATXR7; SDG25", "organism": "Arabidopsis", "refseq_name": "SET domain protein 25", "refseq_ac": "NP_001318731", "gene_names_uniprotkb": "ATXR7; SDG25; ARABIDOPSIS TRITHORAX-RELATED7; ATXR7; MDH9.9; MDH9_9; SDG25; SET domain protein 25", "gene_names_refseq": "ARABIDOPSIS TRITHORAX-RELATED7; ATXR7; MDH9.9; MDH9_9; SDG25; SET domain protein 25", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ATXR7; 2.1.1.354; 2.1.1.357; Protein SET DOMAIN GROUP 25; Trithorax-related protein 7", "protein_names_refseq": "SET domain protein 25", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42400)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10048488;11130714;11691919;19726574;19855050;21799800;22074104;27862469", "class_list": "", "function": "Histone methyltransferase involved in regulation of flowering time. Required for the expression of the flowering repressors FLC and MADS-box genes of the MAF family (PubMed:19726574, PubMed:19855050). Required for histone H3 dimethylation on 'Lys-36' H3K36me2 at the FLC locus (PubMed:19726574). Required for histone H3 trimethylation on 'Lys-4' (H3K4me3) at the FLC locus. Prevents trimethylation on 'Lys-27' (H3K27me3) at the same locus (PubMed:19855050). Involved in the control of seed dormancy and germination (PubMed:21799800)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A9QA58;Q56XT6;Q945S7;Q9FIH7", "ec_number_list": "2.1.1.357;2.1.1.354;2.1.1.-", "go_molecular_function": "GO:0042800 histone H3K4 methyltransferase activity;GO:0046975 histone H3K36 methyltransferase activity;GO:0140954 histone H3K36 dimethyltransferase activity;GO:0140999 histone H3K4 trimethyltransferase activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0048188 Set1C/COMPASS complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0032259 methylation;GO:0009908 flower development;GO:0009909 regulation of flower development;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4K1J4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9SAZ5-1", "uniprot_id": "AHP3_ARATH", "mass": 17479.0, "length": 155, "protein_name": "Histidine-containing phosphotransfer protein 3", "gene_name": "AHP3", "organism": "Arabidopsis", "refseq_name": "histidine-containing phosphotransmitter 3", "refseq_ac": "NP_001318703", "gene_names_uniprotkb": "AHP3; ATHP2; MUL8.20; MUL8.2; MUL8_20", "gene_names_refseq": "AHP3; ARABIDOPSIS THALIANA HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2; ATHP2; HIS-ASP PHOSPHOTRANSFER SIGNAL TRANSDUCER; MUL8.20; MUL8_20; histidine-containing phosphotransmitter 3", "protein_names_uniprotkb": "Histidine-containing phosphotransfer protein 3", "protein_names_refseq": "histidine-containing phosphotransmitter 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39340)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10050311;10930573;11130714;11158442;11230563;12068096;14593172;14981318;16965536;18642946;22223895;23132142;27862469;9628582;9804162", "class_list": "", "function": "Functions as a two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZWM4", "ec_number_list": "", "go_molecular_function": "GO:0043424 protein histidine kinase binding;GO:0009927 histidine phosphotransfer kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0000160 phosphorelay signal transduction system;GO:0009736 cytokinin-activated signaling pathway;GO:0009557 antipodal cell differentiation;GO:0009560 embryo sac egg cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9SAZ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "uniprot_id": "BIM1_ARATH", "mass": 58710.0, "length": 529, "protein_name": "Transcription factor BIM1", "gene_name": "BIM1", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": "NP_001119190", "gene_names_uniprotkb": "BIM1; BHLH46; EN126; T22D6.70; T22D6_70", "gene_names_refseq": "BIM1; T22D6.70; T22D6_70", "protein_names_uniprotkb": "Transcription factor BIM1; AtbHLH46; BES1-interacting Myc-like protein 1; Basic helix-loop-helix protein 46; Transcription factor EN 126; bHLH 46; bHLH transcription factor bHLH046", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08130)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;12679534;12897250;14600211;15680330;17626058;23111157;23328941;25561503;27862469", "class_list": "", "function": "Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A1L4Z3", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009742 brassinosteroid mediated signaling pathway;GO:1902448 positive regulation of shade avoidance", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9LEZ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LTB8-1", "uniprot_id": "CNBL9_ARATH", "mass": 24532.0, "length": 213, "protein_name": "Calcineurin B-like protein 9", "gene_name": "CBL9", "organism": "Arabidopsis", "refseq_name": "calcineurin B-like protein 9", "refseq_ac": "NP_199521", "gene_names_uniprotkb": "CBL9; ATCBL9; K14A3.5; K14A3_5; calcineurin B-like protein 9", "gene_names_refseq": "ATCBL9; CBL9; K14A3.5; K14A3_5; calcineurin B-like protein 9", "protein_names_uniprotkb": "Calcineurin B-like protein 9", "protein_names_refseq": "calcineurin B-like protein 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47100)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130714;14593172;14730064;15208400;16814720;17898163;17922773;18502848;19825536;19832944;21685179;23335733;23482856;25058458;27862469", "class_list": "", "function": "Acts as a calcium sensor involved in abscisic acid (ABA) signaling and stress-induced ABA biosynthesis pathways. Contributes to the regulation of early stress-related CBF/DREB transcription factors. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. May function as a negative regulator of stress and ABA responses. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement. Involved in the calcium-dependent regulation by CIPK26 of reactive oxygen species production by the NADPH oxidase RBOHF. The CBL9/CIPK3 complex acts in the regulation of abscisic acid response in seed germination., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0019900 kinase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009536 plastid;GO:0016020 membrane", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0009414 response to water deprivation;GO:0009738 abscisic acid-activated signaling pathway;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9LTB8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8W4S5-1", "uniprot_id": "Y5371_ARATH", "mass": 68434.0, "length": 614, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g63710", "gene_name": "MBK5.19", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": "NP_001330851", "gene_names_uniprotkb": "MBK5.19; MBK5.19; MBK5_19", "gene_names_refseq": "MBK5.19; MBK5_19", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At5g63710; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63710)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;20064227;27862469;9330910", "class_list": "", "function": "", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFP3", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity;GO:0004674 protein serine/threonine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W4S5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9XGX0-1", "uniprot_id": "SHI_ARATH", "mass": 35377.0, "length": 331, "protein_name": "Protein SHORT INTERNODES", "gene_name": "SHI", "organism": "Arabidopsis", "refseq_name": "Lateral root primordium (LRP) protein-like protein", "refseq_ac": "NP_201436", "gene_names_uniprotkb": "SHI; K1L20.13; K1L20_13; SHORT INTERNODES", "gene_names_refseq": "K1L20.13; K1L20_13; SHI; SHORT INTERNODES", "protein_names_uniprotkb": "Protein SHORT INTERNODES", "protein_names_refseq": "Lateral root primordium (LRP) protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66350)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10368174;10718197;11130714;11706176;16740146;21976484;27862469", "class_list": "", "function": "Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Suppressor of the gibberellin (GA) signal transduction., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046872 metal ion binding;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009555 pollen development;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9XGX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KHI3-1", "uniprot_id": "VICTR_ARATH", "mass": 132789.0, "length": 1168, "protein_name": "Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response", "gene_name": "VICTR", "organism": "Arabidopsis", "refseq_name": "Disease resistance protein (TIR-NBS-LRR class) family", "refseq_ac": "NP_199464", "gene_names_uniprotkb": "VICTR; K11I1.11; K11I1_11", "gene_names_refseq": "K11I1.11; K11I1_11; VARIATION IN COMPOUND TRIGGERED ROOT growth response; VICTR", "protein_names_uniprotkb": "Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response; 3.2.2.6", "protein_names_refseq": "Disease resistance protein (TIR-NBS-LRR class) family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;12671079;17956627;23275581;27862469", "class_list": "", "function": "Disease resistance protein of the TIR-NB-LRR-type. Part of the RPS6 locus that contains a cluster of several paralogous disease resistance (R) genes. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity). Required for [5-(3,4-dichlorophenyl)furan-2-yl]-piperidine-1-ylmethanethione-(DFPM-) induced root growth arrest due to reduced number of meristem cells in the division zone of the primary root and inhibition of abscisic acid- (ABA-) induced stomatal closing., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVG8;Q9FHF3", "ec_number_list": "3.2.2.6;3.2.2.-", "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4KHI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KAK5-1", "uniprot_id": "PSD2_ARATH", "mass": 71000.0, "length": 635, "protein_name": "Phosphatidylserine decarboxylase proenzyme 2", "gene_name": "PSD2", "organism": "Arabidopsis", "refseq_name": "phosphatidylserine decarboxylase 2", "refseq_ac": "NP_200529", "gene_names_uniprotkb": "PSD2; MUL3.14; MUL3_14", "gene_names_refseq": "MUL3.14; MUL3_14; PHOSPHATIDYLSERINE DECARBOXYLASE 2; PSD2; phosphatidylserine decarboxylase 2", "protein_names_uniprotkb": "Phosphatidylserine decarboxylase proenzyme 2; 4.1.1.65", "protein_names_refseq": "phosphatidylserine decarboxylase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57190)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10718197;11130714;17449644;27862469", "class_list": "", "function": "Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production., [UniProtKB, PubMed, HAMAP, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A4GNA9;Q9LU67", "ec_number_list": "4.1.1.65", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004609 phosphatidylserine decarboxylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009705 plant-type vacuole membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0016540 protein autoprocessing;GO:0006646 phosphatidylethanolamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4KAK5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KEV7-1", "uniprot_id": "FHIT_ARATH", "mass": 20400.0, "length": 180, "protein_name": "Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT", "gene_name": "FHIT", "organism": "Arabidopsis", "refseq_name": "FRAGILE HISTIDINE TRIAD", "refseq_ac": "NP_200632", "gene_names_uniprotkb": "FHIT; FRAGILE HISTIDINE TRIAD; MCK7.11; MCK7_11", "gene_names_refseq": "FHIT; FRAGILE HISTIDINE TRIAD; MCK7.11; MCK7_11", "protein_names_uniprotkb": "Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT; 2.7.7.51; 3.6.1.29; 3.6.2.1; 3.9.1.-; Adenosine 5'-monophosphoramidase FHIT; Adenylylsulfatase; Adenylylsulfate-ammonia adenylyltransferase; Fragile histidine triad protein", "protein_names_refseq": "FRAGILE HISTIDINE TRIAD", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58240)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;14593172;18694747;26181368;27862469", "class_list": "", "function": "Possesses dinucleoside triphosphate hydrolase activity (PubMed:18694747). Cleaves P(1)-P(3)-bis(5'-adenosyl) triphosphate (Ap3A) to yield AMP and ADP (PubMed:18694747). Exhibits adenylylsulfatase activity, hydrolyzing adenosine 5'-phosphosulfate to yield AMP and sulfate (PubMed:18694747). Exhibits adenosine 5'-monophosphoramidase activity, hydrolyzing purine nucleotide phosphoramidates with a single phosphate group such as adenosine 5'monophosphoramidate (AMP-NH2) to yield AMP and NH2 (PubMed:18694747). Exhibits adenylylsulfate-ammonia adenylyltransferase, catalyzing the ammonolysis of adenosine 5'-phosphosulfate resulting in the formation of adenosine 5'-phosphoramidate (PubMed:26181368)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WL2;Q9LVM4", "ec_number_list": "3.6.2.1;3.6.1.29;3.9.1.-;2.7.7.51;2.7.7.5", "go_molecular_function": "GO:0000166 nucleotide binding;GO:0004081 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity;GO:0047710 bis(5'-adenosyl)-triphosphatase activity;GO:0047352 adenylylsulfate-ammonia adenylyltransferase activity;GO:0047627 adenylylsulfatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0002188 translation reinitiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4KEV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K5J1-1", "uniprot_id": "MYO17_ARATH", "mass": 173377.0, "length": 1531, "protein_name": "Myosin-17", "gene_name": "XI-K; XIK", "organism": "Arabidopsis", "refseq_name": "myosin family protein with Dil", "refseq_ac": "NP_001318612", "gene_names_uniprotkb": "XI-K; XIK; ATXIK; F7C8.80; F7C8_80; MYOSIN XI K; MYOSIN XI-17; XI-17; XI-K; XIK", "gene_names_refseq": "ATXIK; F7C8.80; F7C8_80; MYOSIN XI K; MYOSIN XI-17; XI-17; XI-K; XIK", "protein_names_uniprotkb": "Myosin-17; AtXIK; Myosin XI K", "protein_names_refseq": "myosin family protein with Dil", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20490)", "pathway_count": 1, "publication_count": 38, "publication_id_list": "10984423;11130714;11516337;17288617;17458634;17500056;18178669;18463617;18503043;19060218;19245862;19369591;19376835;19688752;20351265;20466843;20581304;21233331;21768351;21914656;22672737;22969781;23111157;23328941;23572148;23660473;23776212;23995081;24601666;25561503;26091701;27419465;27862469;28011693;28096376;29167316;30833711;39777035", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in the tip growth of root hair cells and in the elongation of trichome stalk and branches. Plays a major role in trafficking of Golgi stacks, mitochondria and peroxisomes during root hair development. Acts as the primary contributor to ER streaming with a major role in the movement of Golgi bodies. Required for development of pavement cells, trichomes, and stigmatic papillae. Together with XI-F, required for the regulation of organ bending, such as gravitropic root bending (PubMed:39777035)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E9N630;F4K5J2;K9KY88;Q0WQJ2", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0030133 transport vesicle;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0007015 actin filament organization;GO:0051301 cell division;GO:0009791 post-embryonic development;GO:0030048 actin filament-based movement;GO:0051646 mitochondrion localization", "synthesized_glycan_count": 0, "hit_score": 3.9, "record_id": "F4K5J1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q00958-1", "uniprot_id": "LFY_ARATH", "mass": 46582.0, "length": 420, "protein_name": "Protein LEAFY", "gene_name": "LFY", "organism": "Arabidopsis", "refseq_name": "floral meristem identity control protein LEAFY (LFY)", "refseq_ac": "NP_001331273", "gene_names_uniprotkb": "LFY; LEAFY 3; LEAFY; LFY3; MAC9.13; MAC9.18; MAC9_13", "gene_names_refseq": "LEAFY 3; LEAFY; LFY3; LFY; MAC9.13; MAC9_13", "protein_names_uniprotkb": "Protein LEAFY", "protein_names_refseq": "floral meristem identity control protein LEAFY (LFY)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61850)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;11973317;1350515;17147637;18784751;22074104;22323601;27862469;8565821;9628582;9783581", "class_list": "", "function": "Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1. Is required subsequently for the transition of an inflorescence meristem into a floral meristem, by an immediate upstream regulation of the ABC classes of floral homeotic genes. Activates directly APETALA1, CAULIFLOWER and AGAMOUS, and indirectly APETALA3 and PISTILLATA with the cooperation of UFO., [UniProtKB, PubMed, PubMed, UniProtKB]; Probable transcription factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0MFR2;Q1PDG5;Q8LSH2;Q8LSH3", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0031490 chromatin DNA binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009908 flower development;GO:0010077 maintenance of inflorescence meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q00958-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9FLI3-1", "uniprot_id": "P2C75_ARATH", "mass": 46043.0, "length": 416, "protein_name": "Probable protein phosphatase 2C 75", "gene_name": "AHG1", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2C family protein", "refseq_ac": "NP_199989", "gene_names_uniprotkb": "AHG1; MIO24.11; MIO24_11", "gene_names_refseq": "ABA-hypersensitive germination 1; AHG1; MIO24.11; MIO24_11", "protein_names_uniprotkb": "Probable protein phosphatase 2C 75; 3.1.3.16; AtPP2C75; PP2C AHG1; Protein ABA-HYPERSENSITIVE GERMINATION 1; Protein phosphatase 2C AHG1", "protein_names_refseq": "Protein phosphatase 2C family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51760)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;17461784;19021904;22060019;27862469;9628582", "class_list": "", "function": "Negative regulator of abscisic acid (ABA) responses during seed germination., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.1.3.16;3.1.3.27;3.1.3.48;2.7.11.1;2.7.13.3", "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9FLI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6XAT2-1", "uniprot_id": "ERL2_ARATH", "mass": 106680.0, "length": 967, "protein_name": "LRR receptor-like serine/threonine-protein kinase ERL2", "gene_name": "ERL2", "organism": "Arabidopsis", "refseq_name": "ERECTA-like 2", "refseq_ac": "NP_196335", "gene_names_uniprotkb": "ERL2; ERECTA-like 2; T28J14.120; T28J14_120", "gene_names_refseq": "ERECTA-like 2; ERL2; T28J14.120; T28J14_120", "protein_names_uniprotkb": "LRR receptor-like serine/threonine-protein kinase ERL2; 2.7.11.1; Protein ERECTA-like kinase 2", "protein_names_refseq": "ERECTA-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14985254;16002616;17652352;20064227;27862469", "class_list": "", "function": "Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ERL1 and ER., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 14, "predicted_n_glycosites": 14, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 14, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYP7", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0033612 receptor serine/threonine kinase binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009553 embryo sac development;GO:0010103 stomatal complex morphogenesis;GO:0048481 plant ovule development;GO:0090567 reproductive shoot system development;GO:0048827 phyllome development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6XAT2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4K2R6-1", "uniprot_id": "CB60G_ARATH", "mass": 63068.0, "length": 563, "protein_name": "Calmodulin-binding protein 60 G", "gene_name": "CBP60G", "organism": "Arabidopsis", "refseq_name": "Cam-binding protein 60-like G", "refseq_ac": "NP_001190408", "gene_names_uniprotkb": "CBP60G; Cam-binding protein 60-like G; F2P16.9; F2P16_9", "gene_names_refseq": "CBP60G; Cam-binding protein 60-like G; F2P16.9; F2P16_9", "protein_names_uniprotkb": "Calmodulin-binding protein 60 G", "protein_names_refseq": "Cam-binding protein 60-like G", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26920)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;11782485;16258017;19214217;20921422;21615571;22466450;23118477;23153277;27862469;29757140", "class_list": "", "function": "Transcription activator that binds DNA in a sequence-specific manner, 5'-GAAATTTTGG-3', to promote the expression of target genes (PubMed:20921422, PubMed:21615571, PubMed:23153277, PubMed:29757140). Recruited to the promoter of ICS1 and other defense-related genes (e.g. PR1, PR2 and EDS5) in response to both biotic (e.g. Pseudomonas syringae pv. maculicola ES4326, P.syringae pv. tomato DC3000, and microbe-associated molecular patterns (MAMPs) such as flg22) and abiotic stresses (e.g. UV-B, drought and abscisic acid), thus triggering rapid defense responses by stimulating salicylic acid (SA) biosynthesis. Involved in basal and systemic acquired resistance to P.syringae and Hyaloperonospora arabidopsidis (PubMed:19214217, PubMed:20921422, PubMed:21615571, PubMed:22466450). Mediates resistance to drought and sensitivity to abscisic acid (ABA), especially for ABA-mediated signaling process that regulates early seedling growth (PubMed:22466450)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K2R7;Q2VYG1", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0005516 calmodulin binding;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009617 response to bacterium;GO:0071456 cellular response to hypoxia;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F4K2R6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KAB8-1", "uniprot_id": "MCM6_ARATH", "mass": 92851.0, "length": 831, "protein_name": "DNA replication licensing factor MCM6", "gene_name": "MCM6", "organism": "Arabidopsis", "refseq_name": "minichromosome maintenance (MCM2/3/5) family protein", "refseq_ac": "NP_680393", "gene_names_uniprotkb": "MCM6; K15C23; MINICHROMOSOME MAINTENANCE 6", "gene_names_refseq": "MCM6; MINICHROMOSOME MAINTENANCE 6", "protein_names_uniprotkb": "DNA replication licensing factor MCM6; 3.6.4.12; AtMCM6; Minichromosome maintenance protein 6", "protein_names_refseq": "minichromosome maintenance (MCM2/3/5) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44635)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;17556508;18528439;19357199;27862469", "class_list": "", "function": "Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity., [UniProtKB, UniProtKB]; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.1.-.-;5.6.2.3;3.6.4.12;3.6.-.-;2.7.7.-;3.6.4.13;5.6.2.4;5.6.2.-;3.6.1.-;3.6.4.-;2.7.11.1;2.7.4.3;5.6.2.5;7.2.2.-;3.6.4.6;3.6.1.25", "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0003697 single-stranded DNA binding;GO:0003678 DNA helicase activity", "go_cellular_component": "GO:0000347 THO complex;GO:0005634 nucleus;GO:0000785 chromatin;GO:0042555 MCM complex", "go_biological_process": "GO:0006270 DNA replication initiation;GO:0000727 double-strand break repair via break-induced replication;GO:1902969 mitotic DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4KAB8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LVG2-1", "uniprot_id": "TOE2_ARATH", "mass": 53164.0, "length": 485, "protein_name": "AP2-like ethylene-responsive transcription factor TOE2", "gene_name": "TOE2", "organism": "Arabidopsis", "refseq_name": "target of early activation tagged (EAT) 2", "refseq_ac": "NP_200820", "gene_names_uniprotkb": "TOE2; MGO3.10; MGO3_10", "gene_names_refseq": "MGO3.10; MGO3_10; TOE2; target of early activation tagged (EAT) 2", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor TOE2; Protein TARGET OF EAT 2", "protein_names_refseq": "target of early activation tagged (EAT) 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60120)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;14555699;14593172;16407444;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding;GO:0001222 transcription corepressor binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0045824 negative regulation of innate immune response;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LVG2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "O04719-1", "uniprot_id": "P2C77_ARATH", "mass": 46306.0, "length": 423, "protein_name": "Protein phosphatase 2C 77", "gene_name": "ABI2", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2C family protein", "refseq_ac": "NP_001119448", "gene_names_uniprotkb": "ABI2; ABA INSENSITIVE 2; AtABI2; MHM17.19; MHM17_19; PP2C77; PROTEIN PHOSPHATASE 2C", "gene_names_refseq": "ABA INSENSITIVE 2; ABI2; AtABI2; MHM17.19; MHM17_19; PROTEIN PHOSPHATASE 2C", "protein_names_uniprotkb": "Protein phosphatase 2C 77; 3.1.3.16; AtPP2C77; PP2C ABI2; Protein ABSCISIC ACID-INSENSITIVE 2; Protein phosphatase 2C ABI2", "protein_names_refseq": "Protein phosphatase 2C family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57050)", "pathway_count": 1, "publication_count": 45, "publication_id_list": "10488243;10718197;10872217;10950871;11130714;11208021;11701885;11707572;11882947;12119381;12194854;12232276;12447533;12609042;14504388;14576281;14593172;14596925;14731256;15130549;15599761;15923322;16021341;16339784;16571665;16998070;17267444;18162593;18278579;19021904;19407142;19407143;19769575;20729862;22116026;22730405;23820729;27862469;31708935;8787023;9090884;9108297;9165752;9276963;9468303", "class_list": "", "function": "Repressor of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as stomatal closure, osmotic water permeability of the plasma membrane (Pos), high light stress, response to glucose, seed germination and inhibition of vegetative growth. During the stomatal closure regulation, modulates the inward calcium-channel permeability as well as H(2)O(2) and oxidative burst in response to ABA and dehydration. Represses GHR1 and, to some extent, SRK2E/OST1, kinases involved in the regulation of SLAC1-dependent stomatal closure (PubMed:22730405). Controls negatively fibrillin that is involved in mediating ABA-induced photoprotection. May be implicated in ABA content regulation. Involved in acquired thermotolerance of root growth and seedling survival. Required for the Erwinia amylovora harpin-induced (HrpN) drought tolerance. Involved in the hydrotropic response., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H561", "ec_number_list": "3.1.3.16;3.1.3.27;3.1.3.48;2.7.11.1;2.7.13.3", "go_molecular_function": "GO:0046872 metal ion binding;GO:0030295 protein kinase activator activity;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0008287 protein serine/threonine phosphatase complex", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006470 protein dephosphorylation;GO:1902531 regulation of intracellular signal transduction;GO:0009414 response to water deprivation;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 4.6, "record_id": "O04719-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KAF2-1", "uniprot_id": "MORC4_ARATH", "mass": 89695.0, "length": 800, "protein_name": "Protein MICRORCHIDIA 4", "gene_name": "ATMORC4; MORC4", "organism": "Arabidopsis", "refseq_name": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "refseq_ac": "NP_199891", "gene_names_uniprotkb": "ATMORC4; MORC4; CRH4; MFB16.18; MFB16_18", "gene_names_refseq": "MFB16.18; MFB16_18", "protein_names_uniprotkb": "Protein MICRORCHIDIA 4; 3.6.-.-; AtMORC4; CRT1-h4; Protein CRT1-homolog 4", "protein_names_refseq": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50780)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;19704828;24799676;27171361;27862469", "class_list": "", "function": "Exhibits ATPase activity. Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair. Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing. May also be involved in the regulation of chromatin architecture to maintain gene silencing. Together with MORC7, acts to suppress a wide set of non-methylated protein-coding genes, especially involved in pathogen response. Positive regulator of defense against the oomycete Hyaloperonospora arabidopsidis (Hpa) (PubMed:27171361)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGW3", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0016604 nuclear body", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006281 DNA repair;GO:0006282 regulation of DNA repair;GO:0060966 regulation of gene silencing by regulatory ncRNA;GO:0080188 gene silencing by siRNA-directed DNA methylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F4KAF2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KCC2-1", "uniprot_id": "PRT6_ARATH", "mass": 223964.0, "length": 2006, "protein_name": "E3 ubiquitin-protein ligase PRT6", "gene_name": "PRT6", "organism": "Arabidopsis", "refseq_name": "proteolysis 6", "refseq_ac": "NP_001318457", "gene_names_uniprotkb": "PRT6; CER3; GED1; T1E22.60; T1E22.70; T1E22_70; proteolysis 6", "gene_names_refseq": "AT5G02300; PRT6; T1E22.70; T1E22_70; proteolysis 6", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase PRT6; 2.3.2.27; Protein GREENING AFTER EXTENDED DARKNESS 1; Protein PROTEOLYSIS 6; RING-type E3 ubiquitin transferase PRT6", "protein_names_refseq": "proteolysis 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02310)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;17572409;19255443;19620738;22020282;25561503;25667318;27173012;27862469;29168982;30117535;8811860", "class_list": "", "function": "Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation., [UniProtKB, UniProtKB]; Ubiquitin protein ligase which is a component of the N-end rule pathway with arginine specificity, and functions with the arginyltransferases ATE1 and ATE2. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation (PubMed:17572409, PubMed:19255443, PubMed:19620738, PubMed:22020282). Does not participate in degradation of proteins with N-terminal Phe or Leu (PubMed:17572409). The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination (PubMed:19255443). The N-end rule pathway regulates various aspects of leaf and shoot development (PubMed:19620738). Involved in the ubiquitination and subsequent degradation of RAP2-12, an activator of hypoxic gene expression. The ubiquitination occurs after the N-arginylation of RAP2-12 by ATE1 or ATE2 under aerobic conditions (PubMed:22020282). The end-rule pathway plays a role in regulating the timing and amplitude of the immune response following infection with the bacterial pathogen Pseudomonas syringae pv tomato (PubMed:27173012, PubMed:30117535). Regulates the biosynthesis of plant-defense metabolites such as glucosinolates, and the biosynthesis and response to the phytohormone jasmonate (JA), which plays a key role in plant immunity (PubMed:27173012). Controls the expression of specific defense-response genes, activates the synthesis pathway for the phytoalexin camalexin, and influences basal resistance to the hemibiotroph pathogen Pseudomonas syringae pv tomato (PubMed:30117535). Coordinates the mobilization of seed storage reserves and regulates the abundance and activities of several proteases following seed germination (PubMed:29168982)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q96248;Q9LZ94;Q9LZ95", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0050832 defense response to fungus;GO:0050994 regulation of lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "F4KCC2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KDH9-1", "uniprot_id": "FIPS5_ARATH", "mass": 133439.0, "length": 1196, "protein_name": "FIP1[V]-like protein", "gene_name": "FIP1[V]; FIPS5", "organism": "Arabidopsis", "refseq_name": "FIP1[V]-like protein", "refseq_ac": "NP_200612", "gene_names_uniprotkb": "FIP1[V]; FIPS5; ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5; K21L19.3; K21L19_3; homolog of yeast FIP1 [V]", "gene_names_refseq": "ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5; K21L19.3; K21L19_3; homolog of yeast FIP1 [V]", "protein_names_uniprotkb": "FIP1[V]-like protein; AtFIP1(V); AtFIPS5; Factor interacting with poly(A) polymerase 1-like 5; Protein HOMOLOG OF YEAST FIP1 [V]", "protein_names_refseq": "FIP1[V]-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58040)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10718197;11130714;16282318;17576667;18221017;18463617;18479511;20466843;23328941;23572148;23660473;23776212;25561503;27862469;29654922;30833711", "class_list": "", "function": "Essential gene (PubMed:16282318). Component of the cleavage and polyadenylation specificity factor (CPSF) complex that plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. FIP1L1 contributes to poly(A) site recognition and stimulates poly(A) addition. Binds to U-rich RNA sequence elements surrounding the poly(A) site. May act to tether poly(A) polymerase to the CPSF complex (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 22, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGU0", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "F4KDH9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LDI3-1", "uniprot_id": "CIPKO_ARATH", "mass": 50635.0, "length": 446, "protein_name": "CBL-interacting serine/threonine-protein kinase 24", "gene_name": "CIPK24; SOS2", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": "NP_198391", "gene_names_uniprotkb": "CIPK24; SOS2; ATSOS2; CIPK24; F6I13.1; K21B8.3; K21B8_3; SALT OVERLY SENSITIVE 2; SNRK3.11; SOS2; SnRK3.11", "gene_names_refseq": "ATSOS2; CBL-INTERACTING PROTEIN KINASE 24; CIPK24; K21B8.3; K21B8_3; SALT OVERLY SENSITIVE 2; SNF1-RELATED PROTEIN KINASE 3.11; SNRK3.11; SOS2", "protein_names_uniprotkb": "CBL-interacting serine/threonine-protein kinase 24; 2.7.11.1; Protein SALT OVERLY SENSITIVE 2; SNF1-related kinase 3.11", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35410)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10725350;10725382;11130714;11402167;12034882;12226505;12805596;14504388;14583601;14593172;14730064;17499048;17825054;19529820;22253446;23111157;24659330;27862469;30867421", "class_list": "", "function": "Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Activates the vacuolar H(+)/Ca(2+) antiporter CAX1 and operates in synergy with CBL4/SOS3 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Phosphorylates CBL1, CBL4 and CBL10., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LKR2", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9LDI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KGN5-1", "uniprot_id": "S40A2_ARATH", "mass": 57094.0, "length": 512, "protein_name": "Solute carrier family 40 member 2", "gene_name": "IREG2", "organism": "Arabidopsis", "refseq_name": "iron regulated 2", "refseq_ac": "NP_001190217", "gene_names_uniprotkb": "IREG2; ATIREG2; F12E4.370; F12E4_370; FERROPORTIN 2; FPN2; iron regulated 2", "gene_names_refseq": "ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 2; ATIREG2; F12E4.370; F12E4_370; FERROPORTIN 2; FPN2; IREG2; iron regulated 2", "protein_names_uniprotkb": "Solute carrier family 40 member 2; AtIREG2; Ferroportin-2; Iron-regulated transporter 2", "protein_names_refseq": "iron regulated 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03570)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14993207;16790430;27862469", "class_list": "", "function": "May be involved in iron transport and iron homeostasis., [UniProtKB, UniProtKB, UniProtKB]; Vacuolar transporter that is involved in the transport of excess nickel into the vacuole under iron deficiency, increasing cellular tolerance to nickel under iron deficiency stress response., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZC8", "ec_number_list": "", "go_molecular_function": "GO:0015087 cobalt ion transmembrane transporter activity;GO:0005381 iron ion transmembrane transporter activity", "go_cellular_component": "GO:0009705 plant-type vacuole membrane;GO:0016020 membrane", "go_biological_process": "GO:0006826 iron ion transport;GO:0015675 nickel cation transport;GO:0006824 cobalt ion transport;GO:0010106 cellular response to iron ion starvation;GO:0000041 transition metal ion transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4KGN5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LVP0-1", "uniprot_id": "Y5639_ARATH", "mass": 120477.0, "length": 1102, "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At5g63930", "gene_name": "MBM17.3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "MBM17.3; MBM17.3; MBM17_3", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable leucine-rich repeat receptor-like protein kinase At5g63930; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63930)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10718197;11130714;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 22, "predicted_n_glycosites": 22, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 22, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.3.2.27;2.7.10.-;3.1.4.46;2.7.11.25;2.7.11.22;2.7.10.1;2.7.11.-;2.7.11.24;2.7.12.1;2.7.11.23;2.7.12.2;2.7.-.-;3.1.26.-;3.1.3.16;2.7.11.34;4.6.1.2", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9LVP0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F4KCE9-1", "uniprot_id": "KNL2_ARATH", "mass": 66055.0, "length": 598, "protein_name": "Kinetochore-associated protein KNL-2 homolog", "gene_name": "KNL2", "organism": "Arabidopsis", "refseq_name": "dentin sialophosphoprotein-like protein", "refseq_ac": "NP_568101", "gene_names_uniprotkb": "KNL2; KINETOCHORE NULL 2; T22P11.110; T22P11_110", "gene_names_refseq": "KINETOCHORE NULL 2; KNL2; T22P11.110; T22P11_110", "protein_names_uniprotkb": "Kinetochore-associated protein KNL-2 homolog; Protein KINETOCHORE NULL 2", "protein_names_refseq": "dentin sialophosphoprotein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02520)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;24014547;27862469;28062749", "class_list": "", "function": "Involved in recognition of centromeres and centromeric localization of the centromere-specific histone CENH3. Required for normal progression of mitosis and meiosis. May play a role in the determination of the epigenetic status of centromeres (PubMed:24014547). Binds DNA and RNA in vitro (PubMed:28062749)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94A31;Q9LZ50", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0016604 nuclear body;GO:0000775 chromosome, centromeric region", "go_biological_process": "GO:0051301 cell division;GO:0034080 CENP-A containing chromatin assembly;GO:0051321 meiotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4KCE9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9C8M9-1", "uniprot_id": "SRF6_ARATH", "mass": 78085.0, "length": 719, "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 6", "gene_name": "SRF6", "organism": "Arabidopsis", "refseq_name": "STRUBBELIG-receptor family 6", "refseq_ac": "NP_175777", "gene_names_uniprotkb": "SRF6; F22G10.31; F22G10.3; F22G10_31; STRUBBELIG-receptor family 6", "gene_names_refseq": "F22G10.31; F22G10_31; SRF6; STRUBBELIG-receptor family 6", "protein_names_uniprotkb": "Protein STRUBBELIG-RECEPTOR FAMILY 6; Leucine-rich repeat receptor kinase-like protein SRF6", "protein_names_refseq": "STRUBBELIG-receptor family 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53730)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130712;17397538;17586839;17651370;17869214;18686298;19376835;20374526;21768351;23111157;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27862469;28011693;29167316", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8M8", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q9C8M9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q9LVI4-1", "uniprot_id": "TIF6B_ARATH", "mass": 37746.0, "length": 352, "protein_name": "Protein TIFY 6B", "gene_name": "JAZ3; TIFY6B", "organism": "Arabidopsis", "refseq_name": "jasmonate-zim-domain protein 3", "refseq_ac": "NP_001078174", "gene_names_uniprotkb": "JAZ3; TIFY6B; JAI3; JASMONATE-INSENSITIVE 3; JAZ3; MEB5.8; TIFY6B; jasmonate-zim-domain protein 3", "gene_names_refseq": "JAI3; JASMONATE-INSENSITIVE 3; JAZ3; TIFY6B; jasmonate-zim-domain protein 3", "protein_names_uniprotkb": "Protein TIFY 6B; Jasmonate ZIM domain-containing protein 3; Protein JASMONATE INSENSITIVE 3", "protein_names_refseq": "jasmonate-zim-domain protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17860)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11130713;14593172;17499004;17637675;17637677;17675405;18223147;18547396;19151223;19309455;20360743;21321051;21335373;27862469", "class_list": "", "function": "Repressor of jasmonate responses., [UniProtKB, UniProtKB, UniProtKB]; Repressor of jasmonate responses. Jasmonoyl-isoleucine (JA-Ile) specifically promotes COI1-TIFY6B/JAZ3 interaction. Acts as a negative regulator of MYC2 function. Feed-back regulated by MYC2., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56W78;Q8LF26", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:0009867 jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9LVI4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q38829-1", "uniprot_id": "IAA11_ARATH", "mass": 26516.0, "length": 246, "protein_name": "Auxin-responsive protein IAA11", "gene_name": "IAA11", "organism": "Arabidopsis", "refseq_name": "indole-3-acetic acid inducible 11", "refseq_ac": "NP_194593", "gene_names_uniprotkb": "IAA11; T5F17.90; T5F17_90", "gene_names_refseq": "IAA11; T5F17.90; T5F17_90; indole-3-acetic acid inducible 11", "protein_names_uniprotkb": "Auxin-responsive protein IAA11; Indoleacetic acid-induced protein 11", "protein_names_refseq": "indole-3-acetic acid inducible 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28640)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;12036262;14593172;14742873;18258861;26091701;27862469;7658471", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations., [UniProtKB, UniProtKB, UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPJ8", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38829-1", "record_type": "protein" } ]