[ { "uniprot_canonical_ac": "A0A1I9LQM1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQM1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQM1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 67, "chemical_mass": 7707.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQM2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQM2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 92, "chemical_mass": 10982.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQN4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQN4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 125, "chemical_mass": 13832.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQN4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQN4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQP1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 62, "chemical_mass": 7064.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQP1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQP1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQT8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQT8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7504.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQU9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQU9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQU9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 258, "chemical_mass": 29765.0, "gene_names": "LAZY5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQU9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQU9" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQU9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQU9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQW3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQW3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 87, "chemical_mass": 9846.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQW3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQW5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQW5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 32, "chemical_mass": 4017.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQW7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQW7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQW7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 37, "chemical_mass": 4013.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQX6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQX6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 76, "chemical_mass": 9469.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQX6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQX8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQX8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 7989.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQX8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQX8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LQY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQY5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 117, "chemical_mass": 12574.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQY5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LR11-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR11", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 100, "chemical_mass": 11448.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR11", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR11" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LR33-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR33", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR33" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 590, "chemical_mass": 65314.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR33", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR33" } ], "pmid": "" } ], "biological_process": [ { "name": "nuclear DNA replication", "id": "GO:0033260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033260", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR33", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR33" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LR96-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR96", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR96" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 248, "chemical_mass": 27715.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LR96", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LR96" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRC2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 226, "chemical_mass": 25829.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC2" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRC4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 63, "chemical_mass": 7137.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRC5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 97, "chemical_mass": 10778.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRC5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRC5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRE7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRE7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 80, "chemical_mass": 8702.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRJ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 316, "chemical_mass": 36235.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ4" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRJ5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 86, "chemical_mass": 10016.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ5" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ5" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRJ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRJ5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRK9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRK9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRK9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 68, "chemical_mass": 7365.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRM7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRM7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRM7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 72, "chemical_mass": 8652.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRM7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRM7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRR3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRR3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 90, "chemical_mass": 10142.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRR3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRR3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRR4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRR4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRR4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 88, "chemical_mass": 10226.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRR4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRR4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRT2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRT2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRT2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 91, "chemical_mass": 10238.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRT2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRT2" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRT2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRT2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRU1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 973, "chemical_mass": 106689.0, "gene_names": "ARA2", "protein_name": "", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "galactokinase activity", "id": "GO:0004335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004335", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "L-arabinokinase activity", "id": "GO:0009702", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009702", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" } ], "biological_process": [ { "name": "galactose metabolic process", "id": "GO:0006012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006012", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "arabinose metabolic process", "id": "GO:0019566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019566", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRU1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRU1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRY8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRY8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRY8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 6417.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRZ5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRZ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRZ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 163, "chemical_mass": 18356.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRZ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRZ5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LRZ7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 122, "chemical_mass": 14084.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LRZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRZ7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LS19-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS19", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS19" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 38, "chemical_mass": 4258.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.10" }, { "uniprot_canonical_ac": "A0A1I9LS57-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS57", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS57" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 114, "chemical_mass": 13219.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS57", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS57" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LS65-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS65", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS65" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 60, "chemical_mass": 7091.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS65", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS65" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LS70-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 515, "chemical_mass": 57830.0, "gene_names": "RAF43;F13I12.1", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "protein serine/threonine/tyrosine kinase activity", "id": "GO:0004712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004712", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS70", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS70" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LS70-1", "start_pos": "24", "end_pos": "24", "site_lbl": "Thr24", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 24, "start_aa": "Thr", "end_pos": 24, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr24", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LS70-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Thr115", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LS70", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LS70" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "iPTMnet", "id": "A0A1I9LS71", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LS71" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LS97-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS97", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 379, "chemical_mass": 45060.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS97", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS97" } ], "pmid": "" } ], "molecular_function": [ { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS97", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS97" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LS99-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS99", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS99" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 61, "chemical_mass": 6435.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LS99", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LS99" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSA3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 351, "chemical_mass": 36732.0, "gene_names": "CWLP;CWLP;cell wall-plasma membrane linker protein", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "178", "end_pos": "178", "site_lbl": "Thr178", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 178, "start_aa": "Thr", "end_pos": 178, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr178", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "184", "end_pos": "184", "site_lbl": "Thr184", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 184, "start_aa": "Thr", "end_pos": 184, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr184", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "186", "end_pos": "186", "site_lbl": "Thr186", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 186, "start_aa": "Thr", "end_pos": 186, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr186", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Thr188", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 188, "start_aa": "Thr", "end_pos": 188, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr188", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Thr198", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 198, "start_aa": "Thr", "end_pos": 198, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr198", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Thr208", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 208, "start_aa": "Thr", "end_pos": 208, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr208", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Thr218", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 218, "start_aa": "Thr", "end_pos": 218, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr218", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "228", "end_pos": "228", "site_lbl": "Thr228", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 228, "start_aa": "Thr", "end_pos": 228, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr228", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "238", "end_pos": "238", "site_lbl": "Thr238", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 238, "start_aa": "Thr", "end_pos": 238, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr238", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "248", "end_pos": "248", "site_lbl": "Thr248", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 248, "start_aa": "Thr", "end_pos": 248, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr248", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSA3-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Thr258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 258, "start_aa": "Thr", "end_pos": 258, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr258", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSA7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSA7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1173, "chemical_mass": 98415.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSB3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSB3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 363, "chemical_mass": 40818.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSC0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 453, "chemical_mass": 49222.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" }, { "name": "P-body", "id": "GO:0000932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000932", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" } ], "molecular_function": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" } ], "biological_process": [ { "name": "cellular response to heat", "id": "GO:0034605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034605", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSC0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSC0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSC0-1", "start_pos": "14", "end_pos": "14", "site_lbl": "Ser14", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LSC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LSC2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSE1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 305, "chemical_mass": 34019.0, "gene_names": "MAGL12", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE1" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipase activity", "id": "GO:0016298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016298", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSE1-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Ser254", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LSE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LSE1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSE1-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Thr258", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LSE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LSE1" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSE2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 100, "chemical_mass": 11727.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSE8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1103, "chemical_mass": 120496.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSE8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSE8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSE8-1", "start_pos": "614", "end_pos": "614", "site_lbl": "Thr614", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 614, "start_aa": "Thr", "end_pos": 614, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr614", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSH2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1197, "chemical_mass": 129467.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSH2-1", "start_pos": "952", "end_pos": "952", "site_lbl": "Ser952", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ4" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSH2-1", "start_pos": "965", "end_pos": "965", "site_lbl": "Ser965", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ4" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSH2-1", "start_pos": "967", "end_pos": "967", "site_lbl": "Ser967", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LZQ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LZQ4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSH4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 294, "chemical_mass": 33566.0, "gene_names": "F16B3.13;F16B3_13", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSH4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSH4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSK1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSK1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSK1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 183, "chemical_mass": 20644.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSK1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSK1" } ], "pmid": "" } ], "molecular_function": [ { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSK1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSK1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSM5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSM5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 106, "chemical_mass": 12258.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSM5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSM5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSN5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSN5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSN5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 472, "chemical_mass": 49349.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSN5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSN5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSP4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 400, "chemical_mass": 45669.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSP4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSP4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSP4-1", "start_pos": "109", "end_pos": "109", "site_lbl": "Ser109", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRL5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRL5" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LSP4-1", "start_pos": "190", "end_pos": "190", "site_lbl": "Ser190", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LRL5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LRL5" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSQ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSQ8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSQ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 105, "chemical_mass": 12206.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSQ8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSQ8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSS0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSS0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSS0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 454, "chemical_mass": 51897.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSS3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSS3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSS3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 666, "chemical_mass": 74448.0, "gene_names": "ELT6;F1C9.19;F1C9_19", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSS3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSS3" } ], "pmid": "" } ], "biological_process": [ { "name": "triglyceride biosynthetic process", "id": "GO:0019432", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019432", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSS3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSS3" } ], "pmid": "" } ], "molecular_function": [ { "name": "diacylglycerol O-acyltransferase activity", "id": "GO:0004144", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004144", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSS3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSS3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LST5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LST5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LST5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 42, "chemical_mass": 4541.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LST5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LST5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSU7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 457, "chemical_mass": 52756.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSU7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSV6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSV6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSV6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 124, "chemical_mass": 14584.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSV6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSV6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 127, "chemical_mass": 14203.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "adenosylmethionine decarboxylase activity", "id": "GO:0004014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004014", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT04" } ], "pmid": "" } ], "biological_process": [ { "name": "spermidine biosynthetic process", "id": "GO:0008295", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008295", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT05-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT05", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 212, "chemical_mass": 24756.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT05", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT05" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT08-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT08", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT08" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 274, "chemical_mass": 31914.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT08", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT08" } ], "pmid": "" }, { "name": "chromosome, centromeric region", "id": "GO:0000775", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000775", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT08", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT08" } ], "pmid": "" } ], "biological_process": [ { "name": "maintenance of meiotic sister chromatid cohesion", "id": "GO:0034090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034090", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT08", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT08" } ], "pmid": "" }, { "name": "meiotic sister chromatid segregation", "id": "GO:0045144", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045144", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT08", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT08" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LT08-1", "start_pos": "158", "end_pos": "158", "site_lbl": "Thr158", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LT08", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LT08" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "A0A1I9LT10", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LT10" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT34-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT34", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT34" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 96, "chemical_mass": 11412.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT34", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT34" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT45-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT45", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT45" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 63, "chemical_mass": 7095.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT65-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT65", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT65" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 63, "chemical_mass": 7434.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT65", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT65" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT67", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 103, "chemical_mass": 11223.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT67", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT67" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT75-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT75", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT75" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 113, "chemical_mass": 13129.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT75", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT75" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT75", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT75" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT82-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT82", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT82" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 401, "chemical_mass": 46212.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT82", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT82" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT92-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT92", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT92" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 291, "chemical_mass": 33220.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT92", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT92" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT96-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT96", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT96" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 172, "chemical_mass": 19836.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT96", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT96" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LT98-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT98", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 203, "chemical_mass": 24114.0, "gene_names": "ATFDB20", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LT98", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LT98" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTA1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTA1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1612, "chemical_mass": 172358.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTA1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTA1" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTA1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTA1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTA1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTA1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1078", "end_pos": "1078", "site_lbl": "Thr1078", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1078, "start_aa": "Thr", "end_pos": 1078, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1078", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1437", "end_pos": "1437", "site_lbl": "Thr1437", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1437, "start_aa": "Thr", "end_pos": 1437, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1437", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1480", "end_pos": "1480", "site_lbl": "Thr1480", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1480, "start_aa": "Thr", "end_pos": 1480, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1480", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1082", "end_pos": "1082", "site_lbl": "Ser1082", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1098", "end_pos": "1098", "site_lbl": "Ser1098", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1110", "end_pos": "1110", "site_lbl": "Ser1110", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1116", "end_pos": "1116", "site_lbl": "Ser1116", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1125", "end_pos": "1125", "site_lbl": "Ser1125", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1128", "end_pos": "1128", "site_lbl": "Ser1128", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "1397", "end_pos": "1397", "site_lbl": "Thr1397", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "206", "end_pos": "206", "site_lbl": "Thr206", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Ser208", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "259", "end_pos": "259", "site_lbl": "Ser259", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "311", "end_pos": "311", "site_lbl": "Thr311", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "346", "end_pos": "346", "site_lbl": "Ser346", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "473", "end_pos": "473", "site_lbl": "Ser473", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Ser476", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "479", "end_pos": "479", "site_lbl": "Ser479", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "482", "end_pos": "482", "site_lbl": "Ser482", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "485", "end_pos": "485", "site_lbl": "Ser485", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "490", "end_pos": "490", "site_lbl": "Ser490", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "574", "end_pos": "574", "site_lbl": "Ser574", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "575", "end_pos": "575", "site_lbl": "Ser575", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "578", "end_pos": "578", "site_lbl": "Ser578", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "618", "end_pos": "618", "site_lbl": "Ser618", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "631", "end_pos": "631", "site_lbl": "Ser631", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "635", "end_pos": "635", "site_lbl": "Ser635", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "637", "end_pos": "637", "site_lbl": "Ser637", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "640", "end_pos": "640", "site_lbl": "Ser640", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "649", "end_pos": "649", "site_lbl": "Ser649", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Ser652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "870", "end_pos": "870", "site_lbl": "Ser870", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "885", "end_pos": "885", "site_lbl": "Ser885", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "889", "end_pos": "889", "site_lbl": "Ser889", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "895", "end_pos": "895", "site_lbl": "Ser895", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "911", "end_pos": "911", "site_lbl": "Ser911", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "913", "end_pos": "913", "site_lbl": "Ser913", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "993", "end_pos": "993", "site_lbl": "Ser993", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTA1-1", "start_pos": "997", "end_pos": "997", "site_lbl": "Ser997", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTB9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTB9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTB9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 38, "chemical_mass": 4423.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTC6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTC6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 104, "chemical_mass": 11727.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTC6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTC6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTD7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTD7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 562, "chemical_mass": 64152.0, "gene_names": "", "protein_name": "", "disease": [], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTD7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTD7" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTD7", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTD7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTE5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTE5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTE5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 102, "chemical_mass": 11067.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTE5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTE5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 652, "chemical_mass": 72552.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTJ3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTJ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Ser139", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Ser218", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "221", "end_pos": "221", "site_lbl": "Ser221", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "226", "end_pos": "226", "site_lbl": "Ser226", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "516", "end_pos": "516", "site_lbl": "Ser516", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTJ3-1", "start_pos": "521", "end_pos": "521", "site_lbl": "Ser521", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4L9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4L9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTK0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTK0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 142, "chemical_mass": 16239.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTK0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTK0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTN0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 211, "chemical_mass": 23273.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LTN0-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Thr42", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 42, "start_aa": "Thr", "end_pos": 42, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr42", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTN3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 393, "chemical_mass": 44447.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" } ], "biological_process": [ { "name": "phospholipid biosynthetic process", "id": "GO:0008654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008654", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" }, { "name": "cutin biosynthetic process", "id": "GO:0010143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010143", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphatase activity", "id": "GO:0016791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016791", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" }, { "name": "glycerol-3-phosphate 2-O-acyltransferase activity", "id": "GO:0090447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090447", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTN3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTN3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LTN3-1", "start_pos": "373", "end_pos": "373", "site_lbl": "Ser373", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J690", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J690" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTP0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 113, "chemical_mass": 12976.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP0" } ], "pmid": "" } ], "molecular_function": [ { "name": "isomerase activity", "id": "GO:0016853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016853", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1054, "chemical_mass": 115221.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTP1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTP1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LTP1-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Thr198", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 198, "start_aa": "Thr", "end_pos": 198, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr198", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTP1-1", "start_pos": "649", "end_pos": "649", "site_lbl": "Thr649", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 649, "start_aa": "Thr", "end_pos": 649, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr649", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTP1-1", "start_pos": "463", "end_pos": "463", "site_lbl": "Thr463", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2Y2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2Y2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTP1-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Thr468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2Y2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2Y2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LTP1-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Ser471", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2Y2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2Y2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTQ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTQ8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTQ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 57, "chemical_mass": 6440.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTS9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTS9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTS9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 138, "chemical_mass": 16076.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTS9", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTS9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTT1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 291, "chemical_mass": 32515.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTT2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTT2", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTT2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 179, "chemical_mass": 19603.0, "gene_names": "", "protein_name": "Glycine-rich protein", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTU3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTU3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTU3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 846, "chemical_mass": 93559.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTU3", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTU3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LTU6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTU6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTU6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 137, "chemical_mass": 15962.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LTU6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LTU6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AM63-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM63" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 77, "chemical_mass": 9084.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM63" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AM70-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM70", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM70" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 919, "chemical_mass": 102170.0, "gene_names": "EXT15;F5O8.27;F5O8_27", "protein_name": "", "disease": [], "molecular_function": [ { "name": "structural constituent of cell wall", "id": "GO:0005199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005199", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM70", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM70" } ], "pmid": "" } ], "biological_process": [ { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM70", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM70" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AM70-1", "start_pos": "675", "end_pos": "675", "site_lbl": "Thr675", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 675, "start_aa": "Thr", "end_pos": 675, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr675", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AM70-1", "start_pos": "220", "end_pos": "220", "site_lbl": "Tyr220", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUC3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUC3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AM70-1", "start_pos": "230", "end_pos": "230", "site_lbl": "Ser230", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUC3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUC3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AM70-1", "start_pos": "237", "end_pos": "237", "site_lbl": "Tyr237", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUC3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUC3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AM75-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM75", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM75" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 211, "chemical_mass": 24142.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM75", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM75" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AM80-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM80", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM80" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 139, "chemical_mass": 15867.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM80", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM80" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AM83-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM83", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM83" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 107, "chemical_mass": 12526.0, "gene_names": "", "protein_name": "1-phosphatidylinositol 4-kinase", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM83", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM83" } ], "pmid": "" }, { "name": "1-phosphatidylinositol 4-kinase activity", "id": "GO:0004430", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004430", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM83", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM83" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AM83", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AM83" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMD1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMD1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 227, "chemical_mass": 26460.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMD1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMD1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AME0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 211, "chemical_mass": 22125.0, "gene_names": "F16A14.5;F16A14_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME0" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME0" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AME0-1", "start_pos": "161", "end_pos": "161", "site_lbl": "Thr161", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 161, "start_aa": "Thr", "end_pos": 161, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr161", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LSL0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 256, "chemical_mass": 27629.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" } ], "biological_process": [ { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LSL0", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSL0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LSL0-1", "start_pos": "128", "end_pos": "128", "site_lbl": "Thr128", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LSL0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LSL0" }, { "database": "iPTMnet", "id": "Q9M058", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M058" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQX1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 381, "chemical_mass": 44117.0, "gene_names": "CP4;F11I4.9;F11I4_9", "protein_name": "", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "pmid": "" }, { "name": "L-ascorbic acid binding", "id": "GO:0031418", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031418", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "pmid": "" }, { "name": "dioxygenase activity", "id": "GO:0051213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051213", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "id": "GO:0016705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016705", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQX1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AT92-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT92" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 100, "chemical_mass": 11220.0, "gene_names": "F5O8.30;F5O8_30", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT92" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT92" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP82-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP82", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP82" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 210, "chemical_mass": 22680.0, "gene_names": "F24B9.22;F24B9_22", "protein_name": "", "disease": [], "molecular_function": [ { "name": "transmembrane receptor protein tyrosine kinase activity", "id": "GO:0004714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004714", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP82", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP82" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP82", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP82" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AP82-1", "start_pos": "48", "end_pos": "48", "site_lbl": "Ser48", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LQP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LQP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AP82-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Ser68", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LQP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LQP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AP82-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Tyr69", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LQP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LQP4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMZ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 327, "chemical_mass": 35166.0, "gene_names": "ESP1;ENHANCED SILENCING PHENOTYPE 1;ESP1;F25P22.26;F25P22_26", "protein_name": "", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "pmid": "" }, { "name": "regulatory ncRNA-mediated post-transcriptional gene silencing", "id": "GO:0035194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035194", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "pmid": "" }, { "name": "mRNA 3'-end processing", "id": "GO:0031124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031124", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AME6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 302, "chemical_mass": 35882.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME6" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AME6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AME6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMH3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMH3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 291, "chemical_mass": 33442.0, "gene_names": "T10F20.18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMH3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMH3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMH3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMH3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AML6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AML6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AML6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 483, "chemical_mass": 54823.0, "gene_names": "F5O8.25;F5O8_25", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AML6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AML6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AML6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AML6" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activator activity", "id": "GO:0043539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043539", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AML6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AML6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AML6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AML6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMN4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMN4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMN4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 626, "chemical_mass": 71173.0, "gene_names": "F9C16.25;F9C16_25", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMN4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMN4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 725, "chemical_mass": 83219.0, "gene_names": "F28G11.17;F28G11_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 4132, "chemical_mass": 460331.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "vesicle", "id": "GO:0031982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031982", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "calcium-mediated signaling", "id": "GO:0019722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019722", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "protein retention in Golgi apparatus", "id": "GO:0045053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045053", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" }, { "name": "protein targeting to vacuole", "id": "GO:0006623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006623", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMP4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "2063", "end_pos": "2063", "site_lbl": "Thr2063", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2063, "start_aa": "Thr", "end_pos": 2063, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2063", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3519", "end_pos": "3519", "site_lbl": "Thr3519", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 3519, "start_aa": "Thr", "end_pos": 3519, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr3519", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "4118", "end_pos": "4118", "site_lbl": "Thr4118", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 4118, "start_aa": "Thr", "end_pos": 4118, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr4118", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "621", "end_pos": "621", "site_lbl": "Thr621", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 621, "start_aa": "Thr", "end_pos": 621, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr621", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "1023", "end_pos": "1023", "site_lbl": "Ser1023", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "1026", "end_pos": "1026", "site_lbl": "Thr1026", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "1070", "end_pos": "1070", "site_lbl": "Ser1070", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "1225", "end_pos": "1225", "site_lbl": "Ser1225", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "1668", "end_pos": "1668", "site_lbl": "Ser1668", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Thr250", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "2529", "end_pos": "2529", "site_lbl": "Thr2529", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3196", "end_pos": "3196", "site_lbl": "Ser3196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3510", "end_pos": "3510", "site_lbl": "Ser3510", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3521", "end_pos": "3521", "site_lbl": "Ser3521", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3523", "end_pos": "3523", "site_lbl": "Ser3523", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMP4-1", "start_pos": "3859", "end_pos": "3859", "site_lbl": "Ser3859", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AMP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AMP4" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 251, "chemical_mass": 27733.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AMQ6-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Thr165", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 165, "start_aa": "Thr", "end_pos": 165, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr165", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AMQ6-1", "start_pos": "237", "end_pos": "237", "site_lbl": "Ser237", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T5" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMQ7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMQ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMQ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 142, "chemical_mass": 16364.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMQ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMQ7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMV0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMV0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 424, "chemical_mass": 47166.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMV0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMV0" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMV0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMV0" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMV0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMV0" } ], "pmid": "" }, { "name": "nuclease activity", "id": "GO:0004518", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004518", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMV0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMV0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMW4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMW4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMW4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 199, "chemical_mass": 23279.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "transcription factor TFIIIC complex", "id": "GO:0000127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000127", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMW4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMW4" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMW4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMW4" } ], "pmid": "" } ], "biological_process": [ { "name": "transcription initiation at RNA polymerase III promoter", "id": "GO:0006384", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006384", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMW4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMW4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AMZ2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 146, "chemical_mass": 16042.0, "gene_names": "T13M22.4;T13M22_4", "protein_name": "Transmembrane protein", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AMZ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMZ2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AMZ2-1", "start_pos": "95", "end_pos": "95", "site_lbl": "Thr95", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 95, "start_aa": "Thr", "end_pos": 95, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr95", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN25-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 691, "chemical_mass": 79684.0, "gene_names": "F12M16.24;F12M16_24", "protein_name": "", "disease": [], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN25" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN25" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AN25-1", "start_pos": "168", "end_pos": "168", "site_lbl": "Thr168", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 168, "start_aa": "Thr", "end_pos": 168, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr168", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN26-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN26", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN26" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 9386.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN26", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN26" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN40-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN40" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 410, "chemical_mass": 46016.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN44-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1095, "chemical_mass": 126571.0, "gene_names": "T23K8.2;T23K8_2", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN44" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN44" } ], "pmid": "" }, { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN44" } ], "pmid": "" } ], "biological_process": [ { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN44" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN57-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN57", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN57" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 37, "chemical_mass": 4127.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN84-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN84", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN84" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 7362.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN84", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN84" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AN89-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 85, "chemical_mass": 9629.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AN89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN89" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANA9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 105, "chemical_mass": 11729.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANA9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANA9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANB3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 199, "chemical_mass": 22429.0, "gene_names": "F22C12.29;F22C12_29", "protein_name": "", "disease": [], "molecular_function": [ { "name": "serine-type endopeptidase inhibitor activity", "id": "GO:0004867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004867", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB3" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANB5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 302, "chemical_mass": 33791.0, "gene_names": "F13K9.18;F13K9_18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB5" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANB8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 49, "chemical_mass": 5865.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANB8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANB8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANC1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANC1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANC1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 78, "chemical_mass": 9077.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANC1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANC1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANE2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANE2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANE2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 87, "chemical_mass": 10099.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANE2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANE2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANE6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANE6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANE6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 120, "chemical_mass": 14930.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANE6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANE6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANJ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 121, "chemical_mass": 13720.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANJ8" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANJ8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANK5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANK5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANK5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 83, "chemical_mass": 9636.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANK5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANK5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANL4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANL4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANL4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 94, "chemical_mass": 10705.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANL4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANL4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANN9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANN9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 127, "chemical_mass": 14729.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANN9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANN9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANN9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANN9" } ], "pmid": "" } ], "molecular_function": [ { "name": "rRNA (uridine-N3-)-methyltransferase activity", "id": "GO:0070042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070042", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANN9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANN9" } ], "pmid": "" } ], "biological_process": [ { "name": "rRNA base methylation", "id": "GO:0070475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070475", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANN9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANN9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 784, "chemical_mass": 88775.0, "gene_names": "F22H5.12;F22H5_12", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ANP5-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Ser196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ANP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ANP5" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ANP5-1", "start_pos": "377", "end_pos": "377", "site_lbl": "Ser377", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ANP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ANP5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ANP5-1", "start_pos": "401", "end_pos": "401", "site_lbl": "Ser401", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ANP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ANP5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ANP5-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Ser652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ANP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ANP5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 354, "chemical_mass": 40572.0, "gene_names": "T9L6.9;T9L6_9", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANQ6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANS6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANS6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 116, "chemical_mass": 13481.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "RNA-directed DNA polymerase activity", "id": "GO:0003964", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003964", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANS6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANS8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANS8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANS8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 79, "chemical_mass": 9341.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANT2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 46, "chemical_mass": 4942.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANT6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 122, "chemical_mass": 14192.0, "gene_names": "T32G9.50;T32G9_50", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT6" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT6" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANT8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANT8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 115, "chemical_mass": 11133.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANU1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANU1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 92, "chemical_mass": 10480.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANU1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANU1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANV7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANV7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 322, "chemical_mass": 35880.0, "gene_names": "F12K21.3", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANV7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANV7" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANV7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANX4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANX4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANX4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 246, "chemical_mass": 28153.0, "gene_names": "T22E19.3;T22E19_3", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANX4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANX4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ANZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANZ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 152, "chemical_mass": 17519.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANZ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ANZ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP12-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP12", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 41, "chemical_mass": 4787.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP31-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP31", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP31" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 102, "chemical_mass": 11410.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP31", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP31" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP43-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP43", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 811, "chemical_mass": 92352.0, "gene_names": "F12P21.10;F12P21_10", "protein_name": "", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP43", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP43" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP43", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP43" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AP43-1", "start_pos": "663", "end_pos": "663", "site_lbl": "Thr663", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 663, "start_aa": "Thr", "end_pos": 663, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr663", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AP43-1", "start_pos": "527", "end_pos": "527", "site_lbl": "Tyr527", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I4T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I4T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AP43-1", "start_pos": "528", "end_pos": "528", "site_lbl": "Ser528", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I4T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I4T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP45-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP45" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 410, "chemical_mass": 46377.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP45" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP46-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP46", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP46" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 91, "chemical_mass": 9685.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP46", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP46" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP54-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP54" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 99, "chemical_mass": 11554.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP54" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP54" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP54" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP64-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP64" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 212, "chemical_mass": 23773.0, "gene_names": "F5A18.10;F5A18_10", "protein_name": "", "disease": [], "molecular_function": [ { "name": "enzyme inhibitor activity", "id": "GO:0004857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004857", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP64" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP64" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP64" } ], "pmid": "" } ], "biological_process": [ { "name": "plant-type cell wall modification", "id": "GO:0009827", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009827", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP64" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AP99-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP99", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP99" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 529, "chemical_mass": 58565.0, "gene_names": "F19K19.6;F19K19_6", "protein_name": "", "disease": [], "molecular_function": [ { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP99", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP99" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AP99", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP99" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APA8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 607, "chemical_mass": 68453.0, "gene_names": "T5I8.4;T5I8_4", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "pmid": "" } ], "molecular_function": [ { "name": "translation initiation factor activity", "id": "GO:0003743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003743", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "pmid": "" }, { "name": "RNA polymerase I general transcription initiation factor activity", "id": "GO:0001181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001181", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "pmid": "" }, { "name": "RNA polymerase I core binding", "id": "GO:0001042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001042", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "pmid": "" } ], "biological_process": [ { "name": "transcription initiation at RNA polymerase I promoter", "id": "GO:0006361", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006361", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APA8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APC2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APC2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 118, "chemical_mass": 13078.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APC2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APC2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APD3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APD3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APD3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 197, "chemical_mass": 22677.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APD3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APD3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APD7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APD7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 213, "chemical_mass": 23829.0, "gene_names": "T9L24.52;T9L24_52", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APD7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APD7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APD7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APD7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8APD7-1", "start_pos": "158", "end_pos": "158", "site_lbl": "Thr158", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 158, "start_aa": "Thr", "end_pos": 158, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr158", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APD7-1", "start_pos": "140", "end_pos": "140", "site_lbl": "Ser140", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS11", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS11" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APD7-1", "start_pos": "148", "end_pos": "148", "site_lbl": "Ser148", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS11", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS11" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APF4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APF4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APF4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 381, "chemical_mass": 42116.0, "gene_names": "F22G5.14;F22G5_14", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APF4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APF4" } ], "pmid": "" }, { "name": "transcription factor TFIIA complex", "id": "GO:0005672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005672", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APF4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APF4" } ], "pmid": "" } ], "biological_process": [ { "name": "transcription by RNA polymerase II", "id": "GO:0006366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006366", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APF4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APF4" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase II promoter", "id": "GO:0006367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006367", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APF4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APF4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8APF4-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Thr129", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 129, "start_aa": "Thr", "end_pos": 129, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr129", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APF4-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Thr67", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 67, "start_aa": "Thr", "end_pos": 67, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr67", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APK5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 43, "chemical_mass": 5133.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APK6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 108, "chemical_mass": 12663.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "pmid": "" }, { "name": "MCM complex", "id": "GO:0042555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042555", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA replication initiation", "id": "GO:0006270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APK6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APK6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APL7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APL7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APL7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7361.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APM6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APM6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 191, "chemical_mass": 22219.0, "gene_names": "", "protein_name": "Retrotransposon gag domain-containing protein", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APN6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 100, "chemical_mass": 11134.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APN6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 436, "chemical_mass": 50096.0, "gene_names": "T7P1.18;T7P1_18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APP1" } ], "pmid": "" } ], "molecular_function": [ { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APP1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8APP1-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Thr378", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C949", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C949" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APP1-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Ser381", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C949", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C949" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APQ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APQ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APQ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 396, "chemical_mass": 43916.0, "gene_names": "CW7;CW7;T30E16.4;T30E16_4", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APQ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APQ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APR3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APR3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 127, "chemical_mass": 13977.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APR3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APR3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APR9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APR9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 90, "chemical_mass": 10143.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APR9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APS1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APS1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APS1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 79, "chemical_mass": 8843.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APT0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APT0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APT0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 73, "chemical_mass": 8281.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APT0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APT0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APU3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APU3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APU3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 112, "chemical_mass": 13096.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APU3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APU3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APU8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APU8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APU8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 99, "chemical_mass": 11625.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APU8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APU8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1425, "chemical_mass": 157044.0, "gene_names": "T32E8.13;T32E8_13", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" }, { "name": "histone reader activity", "id": "GO:0140566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140566", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" }, { "name": "response to hormone", "id": "GO:0009725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009725", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APX1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APX1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "1342", "end_pos": "1342", "site_lbl": "Ser1342", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I8J3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8J3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "1346", "end_pos": "1346", "site_lbl": "Ser1346", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I8J3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8J3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "521", "end_pos": "521", "site_lbl": "Ser521", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I8J3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8J3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "711", "end_pos": "711", "site_lbl": "Ser711", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "730", "end_pos": "730", "site_lbl": "Ser730", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8J3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8J3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8APX1-1", "start_pos": "989", "end_pos": "989", "site_lbl": "Ser989", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APX7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "iPTMnet", "id": "F4I8J3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8J3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APV4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 388, "chemical_mass": 44854.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APV4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8APV4-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Ser76", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8APV4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8APV4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APV7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APV7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 260, "chemical_mass": 29015.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APV7" } ], "pmid": "" } ], "molecular_function": [ { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APV7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APV7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APW5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APW5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 264, "chemical_mass": 29343.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APW5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APW5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8APZ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APZ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APZ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 96, "chemical_mass": 10664.0, "gene_names": "", "protein_name": "", "disease": [], "biological_process": [ { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APZ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APZ3" } ], "pmid": "" } ], "molecular_function": [ { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APZ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APZ3" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8APZ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APZ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ05-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 105, "chemical_mass": 11625.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ19-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ19", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ19" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 253, "chemical_mass": 29418.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ19", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ19" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ20-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ20", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ20" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 76, "chemical_mass": 7772.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ41-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ41", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ41" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 21, "chemical_mass": 2476.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ41", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ41" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ63-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ63" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 787, "chemical_mass": 88927.0, "gene_names": "F8A12.6;F8A12_6", "protein_name": "", "disease": [], "molecular_function": [ { "name": "transaminase activity", "id": "GO:0008483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008483", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ63" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ63" } ], "pmid": "" } ], "biological_process": [ { "name": "meristem maintenance", "id": "GO:0010073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010073", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ63" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ67", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 340, "chemical_mass": 40360.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ86-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 75, "chemical_mass": 8184.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ86" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ87-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ87", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ87" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 135, "chemical_mass": 16296.0, "gene_names": "T22C5.5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ87", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ87" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AQ87-1", "start_pos": "15", "end_pos": "15", "site_lbl": "Thr15", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 15, "start_aa": "Thr", "end_pos": 15, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr15", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ96-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ96", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ96" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 191, "chemical_mass": 22209.0, "gene_names": "", "protein_name": "Retrotransposon gag domain-containing protein", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQA7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 111, "chemical_mass": 13583.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQA7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQA9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 68, "chemical_mass": 7432.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQC2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQC2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 65, "chemical_mass": 7699.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQC2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQC2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQC7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQC7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQC7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 97, "chemical_mass": 11518.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQC7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQC7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQK1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQK1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQK1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 59, "chemical_mass": 6700.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQP2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQP2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQP2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 7198.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQP4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 87, "chemical_mass": 10032.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQP4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQP4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 378, "chemical_mass": 43256.0, "gene_names": "F16A14.13", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Ser141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" }, { "database": "iPTMnet", "id": "Q9XI94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI94" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Ser160", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" }, { "database": "iPTMnet", "id": "Q9XI94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI94" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "164", "end_pos": "164", "site_lbl": "Ser164", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" }, { "database": "iPTMnet", "id": "Q9XI94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI94" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "180", "end_pos": "180", "site_lbl": "Ser180", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" }, { "database": "iPTMnet", "id": "Q9XI94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI94" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Ser193", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AQT9-1", "start_pos": "71", "end_pos": "71", "site_lbl": "Ser71", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AQR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AQR3" }, { "database": "iPTMnet", "id": "Q9XI94", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI94" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQT5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 255, "chemical_mass": 27475.0, "gene_names": "F6D8.5;F6D8_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT5" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQT5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQT5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AQT5-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Thr67", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 67, "start_aa": "Thr", "end_pos": 67, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr67", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQU8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQU8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQU8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 117, "chemical_mass": 13812.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQU8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQU8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQV4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 95, "chemical_mass": 10360.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQV4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQV8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQV8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 8293.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR00-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR00", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR00" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 212, "chemical_mass": 20890.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR29-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR29" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 94, "chemical_mass": 10880.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR29" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR38-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR38", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR38" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 522, "chemical_mass": 53768.0, "gene_names": "F2K11.11;F2K11_11", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR38", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR38" } ], "pmid": "" } ], "biological_process": [ { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR38", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR38" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR40-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR40" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 7541.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR40" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR54-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR54" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 191, "chemical_mass": 22434.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR54", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR54" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR58-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR58", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR58" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 21, "chemical_mass": 2417.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AR64-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR64" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 224, "chemical_mass": 25452.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR64" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AR64", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AR64" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AR64-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Thr146", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 146, "start_aa": "Thr", "end_pos": 146, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr146", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AR64-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Thr42", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 42, "start_aa": "Thr", "end_pos": 42, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr42", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARE9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARE9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARE9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 179, "chemical_mass": 19434.0, "gene_names": "F26A9.14", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARE9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARE9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARE9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARE9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARB6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARB6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 163, "chemical_mass": 18252.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARB6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ARB6-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Thr127", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 127, "start_aa": "Thr", "end_pos": 127, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr127", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARH0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARH0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARH0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 73, "chemical_mass": 8050.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARH0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARH0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARH5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARH5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 155, "chemical_mass": 17675.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARH5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARH5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARI1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7652.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARI2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 458, "chemical_mass": 51156.0, "gene_names": "WSS1A", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI2" } ], "pmid": "" } ], "molecular_function": [ { "name": "metallopeptidase activity", "id": "GO:0008237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008237", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI2" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARI2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARI2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARL9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARL9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARL9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 161, "chemical_mass": 18015.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARL9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARL9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7651.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARP0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 828, "chemical_mass": 92992.0, "gene_names": "TRM22;F1O19.10;F1O19_10;TON1 Recruiting Motif 22;TRM22", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARP0" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARP0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARQ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 316, "chemical_mass": 37064.0, "gene_names": "CP5;F11I4.12;F11I4_12", "protein_name": "", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "pmid": "" }, { "name": "L-ascorbic acid binding", "id": "GO:0031418", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031418", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "pmid": "" }, { "name": "dioxygenase activity", "id": "GO:0051213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051213", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "id": "GO:0016705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016705", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ARQ3-1", "start_pos": "62", "end_pos": "62", "site_lbl": "Ser62", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ARP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ARP5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARQ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 258, "chemical_mass": 29779.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARQ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 86, "chemical_mass": 10107.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1041, "chemical_mass": 120486.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ6" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ6" } ], "pmid": "" }, { "name": "enzyme regulator activity", "id": "GO:0030234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030234", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ARS6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARS6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 92, "chemical_mass": 11113.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ARS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ARS6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ART1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 345, "chemical_mass": 38313.0, "gene_names": "F22H5.18;F22H5_18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor", "id": "GO:0050664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050664", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "pmid": "" } ], "biological_process": [ { "name": "lignan biosynthetic process", "id": "GO:0009807", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009807", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ART7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 31, "chemical_mass": 3611.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ART7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ART7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AS11-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS11", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 62, "chemical_mass": 6648.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS11", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS11" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AS44-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 55, "chemical_mass": 5897.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS44" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AS56-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS56", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS56" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 112, "chemical_mass": 12841.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS56", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS56" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AS86-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 134, "chemical_mass": 14856.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS86" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS86" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AS88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AS88", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AS88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 110, "chemical_mass": 12257.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASA8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 144, "chemical_mass": 16439.0, "gene_names": "T12P18.2;T12P18_2", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASA8" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASA8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASE3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 233, "chemical_mass": 26542.0, "gene_names": "", "protein_name": "Trimethylguanosine synthase", "disease": [], "biological_process": [ { "name": "7-methylguanosine cap hypermethylation", "id": "GO:0036261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036261", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" } ], "molecular_function": [ { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" }, { "name": "RNA cap trimethylguanosine synthase activity", "id": "GO:0071164", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071164", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" }, { "name": "Cajal body", "id": "GO:0015030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015030", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASE7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 34, "chemical_mass": 3748.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASE7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASE7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASF8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 138, "chemical_mass": 15053.0, "gene_names": "F4N21.2;F4N21_2", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "pmid": "" } ], "biological_process": [ { "name": "priming of cellular response to stress", "id": "GO:0080136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080136", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASF8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASF8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASG6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASG6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASG6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 133, "chemical_mass": 14577.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASI0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 365, "chemical_mass": 41309.0, "gene_names": "NCS6;CTU1;T23E18.11;T23E18_11", "protein_name": "", "disease": [], "biological_process": [ { "name": "tRNA thio-modification", "id": "GO:0034227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034227", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "tRNA wobble uridine modification", "id": "GO:0002098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002098", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "tRNA wobble position uridine thiolation", "id": "GO:0002143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002143", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "protein urmylation", "id": "GO:0032447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032447", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" } ], "molecular_function": [ { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "nucleotidyltransferase activity", "id": "GO:0016779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016779", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" }, { "name": "cytosolic tRNA wobble base thiouridylase complex", "id": "GO:0002144", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002144", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ASI0-1", "start_pos": "357", "end_pos": "357", "site_lbl": "Ser357", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ASH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ASH3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASI1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 494, "chemical_mass": 55678.0, "gene_names": "F28G11.10;F28G11_10", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASI1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASI1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASK0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASK0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 8637.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASK0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASK0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASM2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASM2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 121, "chemical_mass": 14235.0, "gene_names": "", "protein_name": "Peptidase C1A papain C-terminal domain-containing protein", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 63, "chemical_mass": 7126.0, "gene_names": "", "protein_name": "Endonuclease/exonuclease/phosphatase domain-containing protein", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASM4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASN1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASN1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 70, "chemical_mass": 7833.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASN1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASQ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASQ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASQ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 74, "chemical_mass": 8633.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASQ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASQ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASS6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASS6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 70, "chemical_mass": 7987.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASS7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASS7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASS7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 175, "chemical_mass": 20481.0, "gene_names": "F17J6.21;F17J6_21", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASS7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASS7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AST1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 662, "chemical_mass": 75431.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "transcription factor TFIIIC complex", "id": "GO:0000127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000127", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "pmid": "" } ], "biological_process": [ { "name": "5S class rRNA transcription by RNA polymerase III", "id": "GO:0042791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042791", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase III promoter", "id": "GO:0006384", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006384", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AST1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AST1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 441, "chemical_mass": 51391.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 261, "chemical_mass": 29617.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASU7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASV6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASV6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASV6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 127, "chemical_mass": 14154.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASY7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 623, "chemical_mass": 72405.0, "gene_names": "F15H21.20;F15H21_20", "protein_name": "", "disease": [], "molecular_function": [ { "name": "structural constituent of cytoskeleton", "id": "GO:0005200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005200", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY7" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ASY7-1", "start_pos": "168", "end_pos": "168", "site_lbl": "Ser168", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ASY7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ASY7" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASY8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 9334.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASZ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 367, "chemical_mass": 41996.0, "gene_names": "AGL94;AGAMOUS-like 94;AGL94;F10D13.25;F10D13_25", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "pollen maturation", "id": "GO:0010152", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010152", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" }, { "name": "regulation of pollen tube growth", "id": "GO:0080092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080092", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASZ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASZ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AT12-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT12", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 22, "chemical_mass": 2426.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT12", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT12" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2226, "chemical_mass": 251338.0, "gene_names": "F17F16.1;F17F16_1", "protein_name": "", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" }, { "name": "poly(U) RNA binding", "id": "GO:0008266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008266", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" } ], "cellular_component": [ { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT95" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "1036", "end_pos": "1036", "site_lbl": "Ser1036", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "2014", "end_pos": "2014", "site_lbl": "Ser2014", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I5Z7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5Z7" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "2047", "end_pos": "2047", "site_lbl": "Thr2047", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" }, { "database": "iPTMnet", "id": "F4I5Z7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5Z7" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "2056", "end_pos": "2056", "site_lbl": "Ser2056", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "45", "end_pos": "45", "site_lbl": "Thr45", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "iPTMnet", "id": "F4I5Z7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5Z7" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "994", "end_pos": "994", "site_lbl": "Ser994", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I5Z7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5Z7" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AT95-1", "start_pos": "999", "end_pos": "999", "site_lbl": "Ser999", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT95", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT95" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" }, { "database": "iPTMnet", "id": "F4I5Z7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5Z7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AT86-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 195, "chemical_mass": 21277.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT86" } ], "pmid": "" }, { "name": "3-isopropylmalate dehydrogenase activity", "id": "GO:0003862", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003862", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT86" } ], "pmid": "" } ], "biological_process": [ { "name": "L-leucine biosynthetic process", "id": "GO:0009098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009098", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT86" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT86" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AT89-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 281, "chemical_mass": 31800.0, "gene_names": "T22I11.13;T22I11_13", "protein_name": "Protein MIZU-KUSSEI 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT89" } ], "pmid": "" } ], "biological_process": [ { "name": "hydrotropism", "id": "GO:0010274", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010274", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AT89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AT89" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATA8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATA8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 41, "chemical_mass": 4686.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATC0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATC0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATC0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 46, "chemical_mass": 5319.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATC0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATC0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATC3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATC3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 55, "chemical_mass": 6200.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATC3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATC7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATC7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATC7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 160, "chemical_mass": 21525.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATJ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 254, "chemical_mass": 28187.0, "gene_names": "F8A5.19;F8A5_19", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATJ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATJ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 202, "chemical_mass": 23658.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATM2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 89, "chemical_mass": 10432.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 219, "chemical_mass": 25864.0, "gene_names": "F21J9.10", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM4" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM4" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM4" } ], "pmid": "" } ], "biological_process": [ { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATM6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1232, "chemical_mass": 137326.0, "gene_names": "HEB1;F13O11.26;F13O11_26;HEB1;hypersensitive to excess boron 1", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM6" } ], "pmid": "" }, { "name": "condensin complex", "id": "GO:0000796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000796", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM6" } ], "pmid": "" } ], "biological_process": [ { "name": "mitotic sister chromatid segregation", "id": "GO:0000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000070", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATM6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ATM6-1", "start_pos": "93", "end_pos": "93", "site_lbl": "Thr93", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ATM6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ATM6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I8B3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8B3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ATM6-1", "start_pos": "97", "end_pos": "97", "site_lbl": "Ser97", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ATM6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ATM6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "F4I8B3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8B3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATP0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 61, "chemical_mass": 6854.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATP0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATQ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATQ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATQ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 125, "chemical_mass": 13907.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATQ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATQ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATR6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 909, "chemical_mass": 102603.0, "gene_names": "F4M15.4;F4M15_4", "protein_name": "", "disease": [], "cellular_component": [ { "name": "retromer, cargo-selective complex", "id": "GO:0030906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030906", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" }, { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" }, { "name": "endocytic recycling", "id": "GO:0032456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032456", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATR6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ATR6-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Tyr303", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I6L0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I6L0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATU5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATU5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 165, "chemical_mass": 19196.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATU5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATU5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ATX8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATX8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 151, "chemical_mass": 16015.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ATX8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ATX8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU04", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 40, "chemical_mass": 4424.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU04", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU14-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU14", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 127, "chemical_mass": 14516.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU14", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU14" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU29-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU29" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 722, "chemical_mass": 81167.0, "gene_names": "T20M3.5;T20M3_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU29" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU29" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU29", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU29" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU44-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 73, "chemical_mass": 8203.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU44", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU44" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU61-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 610, "chemical_mass": 69541.0, "gene_names": "T22J18.17;T22J18_17", "protein_name": "", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" }, { "name": "CC tRNA cytidylyltransferase activity", "id": "GO:0052927", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052927", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" }, { "name": "ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity", "id": "GO:0052929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052929", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" }, { "name": "nucleotidyltransferase activity", "id": "GO:0016779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016779", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" }, { "name": "catalytic activity, acting on RNA", "id": "GO:0140098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140098", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" } ], "biological_process": [ { "name": "tRNA 3'-terminal CCA addition", "id": "GO:0001680", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001680", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU61", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU61" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AU78-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AU78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AU78" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 169, "chemical_mass": 19714.0, "gene_names": "", "protein_name": "Retrotransposon gag domain-containing protein", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZS4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 380, "chemical_mass": 42333.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUA6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUA6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUA6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 117, "chemical_mass": 13697.0, "gene_names": "", "protein_name": "RING-type E3 ubiquitin transferase", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUA6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUA6" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUA6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUA6" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUA6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUA6" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUA6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUA6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUF7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUF7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUF7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 136, "chemical_mass": 15525.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUF7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUF7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUG0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUG0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 74, "chemical_mass": 9017.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUG0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUG0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUG1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUG1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUG1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 434, "chemical_mass": 49653.0, "gene_names": "ELM2;ELM2;F16A14.9;F16A14_9", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUG1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUG1" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUG1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUG1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUJ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7796.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUJ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 454, "chemical_mass": 51549.0, "gene_names": "MTERF27;T22I11.17;T22I11_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" } ], "molecular_function": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription termination", "id": "GO:0006353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006353", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUJ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUJ8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUK0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUK0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 65, "chemical_mass": 7262.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUK0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUK0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUK9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUK9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUK9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 80, "chemical_mass": 9720.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUK9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUK9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUL6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUL6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUL6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 71, "chemical_mass": 8594.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUL6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUL6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUM0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUM0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUM0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 194, "chemical_mass": 23033.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUM0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUM0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUN6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 393, "chemical_mass": 45185.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" }, { "name": "regulation of double-strand break repair", "id": "GO:2000779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000779", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUN6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUN6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUP0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 396, "chemical_mass": 43224.0, "gene_names": "F14C21.33;F14C21_33", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUP0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUP0" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUP0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUP0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AUP0-1", "start_pos": "185", "end_pos": "185", "site_lbl": "Thr185", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 185, "start_aa": "Thr", "end_pos": 185, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr185", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUR6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 104, "chemical_mass": 11672.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUR6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUT7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUT7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUT7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 72, "chemical_mass": 8277.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUT7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUT7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUU6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUU6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUU6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 280, "chemical_mass": 30727.0, "gene_names": "F11M15.15;F11M15_15", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUU6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUU6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUU6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUU6" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUU6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUU6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AUU6-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Thr42", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 42, "start_aa": "Thr", "end_pos": 42, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr42", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUU6-1", "start_pos": "121", "end_pos": "121", "site_lbl": "Ser121", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I823", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I823" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUU6-1", "start_pos": "16", "end_pos": "16", "site_lbl": "Ser16", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I823", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I823" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 71, "chemical_mass": 8161.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUV5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUV5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUV5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 8939.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUV5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUV5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUV9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUV9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUV9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 88, "chemical_mass": 10134.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUV9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUV9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUW5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUW5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 10, "chemical_mass": 1164.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUX0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 113, "chemical_mass": 12524.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUX0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV14-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV14", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 19, "chemical_mass": 2476.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV14", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV14" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV76-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV76", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV76" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 265, "chemical_mass": 28901.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV76", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV76" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV53-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV53" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 746, "chemical_mass": 82719.0, "gene_names": "T19D16.24;T19D16_24", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV53" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV59-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV59", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV59" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 141, "chemical_mass": 14819.0, "gene_names": "", "protein_name": "Leucine-rich repeat extensin-like protein 3", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV88", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 576, "chemical_mass": 64510.0, "gene_names": "F11I4.15;F11I4_15", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV88", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV88" } ], "pmid": "" } ], "molecular_function": [ { "name": "acid-amino acid ligase activity", "id": "GO:0016881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016881", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV88", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV88" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV88", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV88" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AV88-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Tyr378", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C735" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AV88-1", "start_pos": "379", "end_pos": "379", "site_lbl": "Tyr379", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C735" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AV88-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Thr381", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C735" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AV88-1", "start_pos": "385", "end_pos": "385", "site_lbl": "Ser385", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C735" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AV88-1", "start_pos": "386", "end_pos": "386", "site_lbl": "Tyr386", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C735" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AV92-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV92" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 189, "chemical_mass": 21444.0, "gene_names": "F7H2.13;F7H2_13", "protein_name": "", "disease": [], "molecular_function": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV92" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV92" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AV92", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AV92" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AV92-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Ser139", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LMQ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LMQ5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVB5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVB5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 135, "chemical_mass": 15865.0, "gene_names": "", "protein_name": "", "disease": [], "biological_process": [ { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVB5" } ], "pmid": "" } ], "molecular_function": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVB5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVB5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVD0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVD0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 176, "chemical_mass": 19916.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVD0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVD0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVD0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVD0" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVD0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVD0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVE0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVE0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVE0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 377, "chemical_mass": 42915.0, "gene_names": "T4O12.10;T4O12_10", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVE0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVE0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVE0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVE0" } ], "pmid": "" } ], "molecular_function": [ { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVE0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVE0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AVE0-1", "start_pos": "112", "end_pos": "112", "site_lbl": "Thr112", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0P9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0P9" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVH8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 327, "chemical_mass": 38207.0, "gene_names": "T16N11.5;T16N11_5", "protein_name": "", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "pmid": "" }, { "name": "dioxygenase activity", "id": "GO:0051213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051213", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "pmid": "" }, { "name": "2-oxoglutarate-dependent dioxygenase activity", "id": "GO:0016706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016706", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVH8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVH8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AVH8-1", "start_pos": "167", "end_pos": "167", "site_lbl": "Thr167", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9D9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9D9" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AVH8-1", "start_pos": "170", "end_pos": "170", "site_lbl": "Tyr170", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M9D9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M9D9" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVI5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVI5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 182, "chemical_mass": 20940.0, "gene_names": "EMB1273;F13F21.5;F13F21_5;emb1273;embryo defective 1273", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVI5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVI5" } ], "pmid": "" } ], "biological_process": [ { "name": "cellular response to salt stress", "id": "GO:0071472", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071472", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVI5" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVI5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVI5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVJ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1341, "chemical_mass": 148941.0, "gene_names": "YUP8H12R.20;YUP8H12R.20;YUP8H12R_20", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVJ4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVJ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AVJ4-1", "start_pos": "976", "end_pos": "976", "site_lbl": "Thr976", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDJ4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AVJ4-1", "start_pos": "980", "end_pos": "980", "site_lbl": "Thr980", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDJ4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVM4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 85, "chemical_mass": 10094.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVM6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVM6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 154, "chemical_mass": 17782.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVN1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 245, "chemical_mass": 28380.0, "gene_names": "F10D13.17;F10D13_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN1" } ], "pmid": "" } ], "molecular_function": [ { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN1" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN1" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVN5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVN5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVN5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 61, "chemical_mass": 6882.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVQ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVQ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 91, "chemical_mass": 11265.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVQ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVR2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVR2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVR2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 189, "chemical_mass": 21382.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVR2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVR2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVS4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 22, "chemical_mass": 2630.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVS4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVS4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVU4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVU4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVU4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 73, "chemical_mass": 8611.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVU4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVU4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AVV8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVV8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 192, "chemical_mass": 22246.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AVV8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVV8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW05-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 143, "chemical_mass": 16844.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW05" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW30-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW30", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW30" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 76, "chemical_mass": 8756.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW32-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW32", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW32" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 162, "chemical_mass": 18264.0, "gene_names": "F16G16.5;F16G16_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW32", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW32" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW47-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 469, "chemical_mass": 52342.0, "gene_names": "F28N24.28;F28N24_28", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "pmid": "" }, { "name": "preribosome, large subunit precursor", "id": "GO:0030687", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030687", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "pmid": "" }, { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "pmid": "" } ], "biological_process": [ { "name": "ribosomal large subunit biogenesis", "id": "GO:0042273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042273", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW47" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW49-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW49", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW49" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 120, "chemical_mass": 13168.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW53-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 207, "chemical_mass": 24201.0, "gene_names": "PSF1;F18B13.27;F18B13_27;PSF1;partner of SLD five 1", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "pmid": "" }, { "name": "GINS complex", "id": "GO:0000811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000811", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA replication initiation", "id": "GO:0006270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "pmid": "" }, { "name": "DNA strand elongation involved in mitotic DNA replication", "id": "GO:1902983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902983", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW53", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW53" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW78-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW78" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 63, "chemical_mass": 7212.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW78" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW86-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 7806.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW86", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW86" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW93-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW93", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW93" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 143, "chemical_mass": 16050.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW93", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW93" } ], "pmid": "" }, { "name": "RNA polymerase I core factor complex", "id": "GO:0070860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070860", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW93", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW93" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW93", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW93" } ], "pmid": "" }, { "name": "RNA polymerase I core promoter sequence-specific DNA binding", "id": "GO:0001164", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001164", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW93", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW93" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW98-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 7565.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW98" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWA7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 182, "chemical_mass": 20771.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWA7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWD6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWD6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 637, "chemical_mass": 74456.0, "gene_names": "F24J1.24", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWD6" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWD6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWD0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWD0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 7242.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWD2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWD2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWD2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 70, "chemical_mass": 7979.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWF5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 223, "chemical_mass": 24703.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein methyltransferase activity", "id": "GO:0008276", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008276", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWF5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWF5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWH6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWH6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWH6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 124, "chemical_mass": 14301.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWH6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWH6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWH6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWH6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWJ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 71, "chemical_mass": 7714.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWJ7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 228, "chemical_mass": 25972.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWJ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 54, "chemical_mass": 6514.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWJ9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWJ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWK7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWK7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWK7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 327, "chemical_mass": 37711.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWK7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWK7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 671, "chemical_mass": 74247.0, "gene_names": "T18K17.17;T18K17_17", "protein_name": "", "disease": [], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWP1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWP1" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWP1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWR9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 944, "chemical_mass": 102003.0, "gene_names": "T7P1.21;T7P1_21", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWR9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWR9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Thr447", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 447, "start_aa": "Thr", "end_pos": 447, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr447", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "500", "end_pos": "500", "site_lbl": "Thr500", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 500, "start_aa": "Thr", "end_pos": 500, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr500", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "608", "end_pos": "608", "site_lbl": "Thr608", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 608, "start_aa": "Thr", "end_pos": 608, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr608", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "248", "end_pos": "248", "site_lbl": "Thr248", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "252", "end_pos": "252", "site_lbl": "Ser252", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Ser254", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "290", "end_pos": "290", "site_lbl": "Ser290", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Ser69", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWR9-1", "start_pos": "715", "end_pos": "715", "site_lbl": "Thr715", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C946", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C946" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWS5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWS5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWS5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 700, "chemical_mass": 77463.0, "gene_names": "SIF1;T14L22.4;T14L22_4", "protein_name": "non-specific serine/threonine protein kinase", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWS5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWS5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWS5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWS5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWS5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWS5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWS5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWS5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AWS5-1", "start_pos": "558", "end_pos": "558", "site_lbl": "Thr558", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 558, "start_aa": "Thr", "end_pos": 558, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr558", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWS5-1", "start_pos": "364", "end_pos": "364", "site_lbl": "Ser364", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZB6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX05-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 474, "chemical_mass": 54333.0, "gene_names": "PPRT1;F14K14.7;F14K14_7", "protein_name": "", "disease": [], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX05" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX05" } ], "pmid": "" } ], "biological_process": [ { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX05" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX05", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX05" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWW1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWW1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWW1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 142, "chemical_mass": 16423.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWW1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWW1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 168, "chemical_mass": 19214.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWX3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 514, "chemical_mass": 55838.0, "gene_names": "T1E4.3;T1E4_3", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX3" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX3" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWX3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWX3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 379, "chemical_mass": 42468.0, "gene_names": "T1K7.4;T1K7_4", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ4" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Ser141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZE3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Ser147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZE3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "start_pos": "300", "end_pos": "300", "site_lbl": "Ser300", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZE3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Thr35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZE3" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AWZ4-1", "start_pos": "38", "end_pos": "38", "site_lbl": "Ser38", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9FZE3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9FZE3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWZ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 247, "chemical_mass": 27283.0, "gene_names": "F12G12.17;F12G12_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AWZ7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 324, "chemical_mass": 36317.0, "gene_names": "T6A9.5;T6A9_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" }, { "name": "chitin catabolic process", "id": "GO:0006032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006032", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" }, { "name": "cell wall macromolecule catabolic process", "id": "GO:0016998", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016998", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" }, { "name": "response to oomycetes", "id": "GO:0002239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002239", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" } ], "molecular_function": [ { "name": "chitinase activity", "id": "GO:0004568", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004568", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AWZ7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AWZ7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX06-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX06", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX06" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 6757.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX06", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX06" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX25-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 489, "chemical_mass": 54921.0, "gene_names": "PDI13;F8A12.17;F8A12_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX25" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX25" } ], "pmid": "" }, { "name": "COPII-coated ER to Golgi transport vesicle", "id": "GO:0030134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030134", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX25", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX25" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX45-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX45" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 506, "chemical_mass": 55859.0, "gene_names": "MEE18;MEE18;T14G11.21;T14G11_21;maternal effect embryo arrest 18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX45" } ], "pmid": "" } ], "molecular_function": [ { "name": "LPPG:FO 2-phospho-L-lactate transferase activity", "id": "GO:0043743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043743", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX45" } ], "pmid": "" } ], "biological_process": [ { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX45" } ], "pmid": "" }, { "name": "pollen tube development", "id": "GO:0048868", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048868", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX45", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX45" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX52-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX52", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 121, "chemical_mass": 13438.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX52", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX52" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX58-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX58", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX58" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 181, "chemical_mass": 20569.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX58", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX58" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX63-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX63" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 202, "chemical_mass": 22945.0, "gene_names": "F19B11.23;F19B11_23", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX63" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX63" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX63" } ], "pmid": "" } ], "molecular_function": [ { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX63", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX63" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX67", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 150, "chemical_mass": 17249.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX67", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX67" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX71-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX71", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX71" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 7819.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX71", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX71" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX72-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX72", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX72" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 254, "chemical_mass": 29607.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX72", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX72" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX73-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX73", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 269, "chemical_mass": 31323.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX73", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX73" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AX73-1", "start_pos": "46", "end_pos": "46", "site_lbl": "Thr46", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 46, "start_aa": "Thr", "end_pos": 46, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr46", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXC3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXC3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 460, "chemical_mass": 50393.0, "gene_names": "MEE15;F12A24.15;F12A24_15;MEE15;maternal effect embryo arrest 15", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXC3" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXC3" } ], "pmid": "" } ], "biological_process": [ { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXC3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXC3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX78-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX78" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 30, "chemical_mass": 3492.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1812, "chemical_mass": 199704.0, "gene_names": "F18A8.15;F18A8_15", "protein_name": "", "disease": [], "molecular_function": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" }, { "name": "proteasome complex", "id": "GO:0000502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000502", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" } ], "biological_process": [ { "name": "proteasome assembly", "id": "GO:0043248", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043248", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" }, { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AX98", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AX98" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "53", "end_pos": "53", "site_lbl": "Ser53", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "54", "end_pos": "54", "site_lbl": "Ser54", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Ser56", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Ser68", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "6", "end_pos": "6", "site_lbl": "Ser6", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "8", "end_pos": "8", "site_lbl": "Ser8", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AX98-1", "start_pos": "9", "end_pos": "9", "site_lbl": "Ser9", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVJ8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXA3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXA3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 122, "chemical_mass": 14100.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXA3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXA3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXI7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXI7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXI7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 136, "chemical_mass": 14152.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXI7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXI7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXK3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXK3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXK3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 8, "chemical_mass": 996.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXM6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXM6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXM6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 42, "chemical_mass": 4360.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXN5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXN5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXN5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 40, "chemical_mass": 4640.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXN5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXN5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 346, "chemical_mass": 38737.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "pmid": "" } ], "molecular_function": [ { "name": "antiporter activity", "id": "GO:0015297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015297", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "pmid": "" }, { "name": "nucleotide-sugar transmembrane transporter activity", "id": "GO:0005338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005338", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "pmid": "" } ], "biological_process": [ { "name": "nucleotide-sugar transmembrane transport", "id": "GO:0015780", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015780", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 206, "chemical_mass": 24146.0, "gene_names": "T10F5.9;T10F5_9", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXQ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXQ8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXQ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 84, "chemical_mass": 10010.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXR2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXR2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXR2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 93, "chemical_mass": 10159.0, "gene_names": "", "protein_name": "Secreted protein", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXR2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXR2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXR6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXR6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 62, "chemical_mass": 6604.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXR7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXR7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXR7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 100, "chemical_mass": 10661.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXR7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXR7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXS1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 45, "chemical_mass": 4806.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXS2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 195, "chemical_mass": 21540.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXS6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 65, "chemical_mass": 6973.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXS8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 31, "chemical_mass": 4005.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXS8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXS8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXU1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXU1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 320, "chemical_mass": 36158.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXU1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXU1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXU9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXU9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXU9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 904, "chemical_mass": 101475.0, "gene_names": "F13M22.17;F13M22_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXU9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXU9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXU9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXU9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AXU9-1", "start_pos": "786", "end_pos": "786", "site_lbl": "Thr786", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 786, "start_aa": "Thr", "end_pos": 786, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr786", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AXU9-1", "start_pos": "364", "end_pos": "364", "site_lbl": "Ser364", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80935", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80935" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXV5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXV5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXV5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 59, "chemical_mass": 6891.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXW3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXW3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXW3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 74, "chemical_mass": 9105.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXW3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXW3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXW5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXW5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 59, "chemical_mass": 7041.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXW5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXW5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXY6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXY6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXY6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 115, "chemical_mass": 12635.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AXZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AXZ1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 167, "chemical_mass": 19453.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY04", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 109, "chemical_mass": 12606.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY04", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY13-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY13", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY13" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 20, "chemical_mass": 2564.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY32-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY32", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY32" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 9553.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY32", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY32" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY32", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY32" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY40-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY40" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 690, "chemical_mass": 78914.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY40" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY40", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY40" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY68-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY68", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY68" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 70, "chemical_mass": 7916.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY68", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY68" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY78-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY78" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 110, "chemical_mass": 12801.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY78" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY78" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY78" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY78", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY78" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY89-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 451, "chemical_mass": 52217.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY89", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY89" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY90-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY90", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY90" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 81, "chemical_mass": 9214.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY90", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY90" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AY95-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AY95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AY95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 252, "chemical_mass": 28279.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYF2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYF2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYF2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 565, "chemical_mass": 63883.0, "gene_names": "EXT6;EXT6;F27C12.10;F27C12_10;extensin 6", "protein_name": "", "disease": [], "molecular_function": [ { "name": "structural constituent of cell wall", "id": "GO:0005199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005199", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYF2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYF2" } ], "pmid": "" } ], "biological_process": [ { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYF2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYF2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYB0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 89, "chemical_mass": 10707.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYB6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 643, "chemical_mass": 72151.0, "gene_names": "T14G11.14;T14G11_14", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular calcium ion homeostasis", "id": "GO:0006874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" }, { "name": "calcium ion transmembrane transport", "id": "GO:0070588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070588", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" }, { "name": "calcium:proton antiporter activity", "id": "GO:0015369", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015369", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYB6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYB6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYD3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 66, "chemical_mass": 7819.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYD6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 189, "chemical_mass": 21803.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "enzyme inhibitor activity", "id": "GO:0004857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004857", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD6" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYD6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYD6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYE6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYE6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYE6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 122, "chemical_mass": 13296.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYI7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYI7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYI7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 239, "chemical_mass": 26330.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYI7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYI7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 905, "chemical_mass": 101979.0, "gene_names": "T4C15.19;T4C15_19", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "start_pos": "225", "end_pos": "225", "site_lbl": "Thr225", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 225, "start_aa": "Thr", "end_pos": 225, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr225", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "start_pos": "495", "end_pos": "495", "site_lbl": "Ser495", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O82177", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O82177" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "start_pos": "500", "end_pos": "500", "site_lbl": "Ser500", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O82177", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O82177" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "start_pos": "628", "end_pos": "628", "site_lbl": "Ser628", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O82177", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O82177" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AYJ0-1", "start_pos": "786", "end_pos": "786", "site_lbl": "Ser786", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O82177", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O82177" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYJ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 87, "chemical_mass": 10119.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ3" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ3" } ], "pmid": "" }, { "name": "NADP binding", "id": "GO:0050661", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050661", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYJ3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYJ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYN3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYN3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYN3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 72, "chemical_mass": 8029.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYN3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYN3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYP1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYP1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 136, "chemical_mass": 15124.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYP2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYP2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYP2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 259, "chemical_mass": 30553.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYP2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYP2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYT1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYT1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYT1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 336, "chemical_mass": 37674.0, "gene_names": "T16F16.20;T16F16_20", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYT1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYT1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYT1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYT1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYU2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 293, "chemical_mass": 33505.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "RNA-directed DNA polymerase activity", "id": "GO:0003964", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003964", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 418, "chemical_mass": 46322.0, "gene_names": "F4P9.12;F4P9_12", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU7" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYU7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYV4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 210, "chemical_mass": 24343.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYV4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYV4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AYX9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYX9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYX9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 143, "chemical_mass": 17542.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AYX9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYX9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ37-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ37", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ37" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 247, "chemical_mass": 28067.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ37", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ37" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ37", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ37" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ47-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ47", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ47" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 27, "chemical_mass": 2987.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZD4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZD4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZD4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 171, "chemical_mass": 19832.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZD4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZD4" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZD4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZD4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ66-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ66", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 67, "chemical_mass": 7129.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ66", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ66" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ67", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 34, "chemical_mass": 3891.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ82-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ82", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ82" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 72, "chemical_mass": 7511.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZ85-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ85", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ85" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 115, "chemical_mass": 12968.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZ85", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZ85" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZA3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZA3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 99, "chemical_mass": 10775.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZA3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZA3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZA7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 30, "chemical_mass": 3659.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZA7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZA7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZA9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 82, "chemical_mass": 9549.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZD7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZD7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 161, "chemical_mass": 17725.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZE1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZE1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZE1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 116, "chemical_mass": 13085.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZE1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZE1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZE1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZE1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZJ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 492, "chemical_mass": 55031.0, "gene_names": "T6A23.2;T6A23_2", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZJ4" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZJ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZJ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AZJ4-1", "start_pos": "179", "end_pos": "179", "site_lbl": "Ser179", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AZJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AZJ3" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZN4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZN4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZN4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 168, "chemical_mass": 18945.0, "gene_names": "T9J23.9;T9J23_9", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZN4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZN4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZP3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZP3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZP3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 82, "chemical_mass": 9233.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZP5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 88, "chemical_mass": 10105.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZP7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZP7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZP7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 60, "chemical_mass": 7007.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZS2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 104, "chemical_mass": 12220.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZS0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 149, "chemical_mass": 16145.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZS3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 33, "chemical_mass": 4042.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS3", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZS9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 29, "chemical_mass": 3138.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZS9", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZS9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZT2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 324, "chemical_mass": 37590.0, "gene_names": "F27D4.5;F27D4_5", "protein_name": "GTD-binding domain-containing protein", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" } ], "molecular_function": [ { "name": "myosin XI tail binding", "id": "GO:0080115", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080115", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZT2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZT2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AZT2-1", "start_pos": "308", "end_pos": "308", "site_lbl": "Tyr308", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AZT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AZT2" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "iPTMnet", "id": "Q9ZUH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUH9" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AZT2-1", "start_pos": "314", "end_pos": "314", "site_lbl": "Ser314", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AZT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AZT2" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "iPTMnet", "id": "Q9ZUH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUH9" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AZT2-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Tyr321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AZT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AZT2" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "iPTMnet", "id": "Q9ZUH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUH9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZU2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZU2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZU2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 7554.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZU2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZU2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZV8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZV8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 68, "chemical_mass": 8001.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZV8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZV8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 64, "chemical_mass": 7219.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 109, "chemical_mass": 12604.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZY7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZY7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZY7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 34, "chemical_mass": 3787.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZZ2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZZ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZZ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 350, "chemical_mass": 39183.0, "gene_names": "F2H17.10;F2H17_10", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZZ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZZ2" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZZ2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZZ2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AZZ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 69, "chemical_mass": 8002.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AZZ4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZZ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B011-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B011", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B011" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 266, "chemical_mass": 30046.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B011", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B011" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B012-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B012", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B012" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 13, "chemical_mass": 1369.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B012", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B012" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B013-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B013", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B013" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 165, "chemical_mass": 18003.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B013", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B013" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8B013-1", "start_pos": "106", "end_pos": "106", "site_lbl": "Thr106", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 106, "start_aa": "Thr", "end_pos": 106, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr106", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B013-1", "start_pos": "110", "end_pos": "110", "site_lbl": "Thr110", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 110, "start_aa": "Thr", "end_pos": 110, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr110", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B017-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B017", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B017" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 103, "chemical_mass": 11431.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B017", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B017" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B019-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B019", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B019" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 45, "chemical_mass": 5065.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B019", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B019" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B041-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B041", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B041" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 666, "chemical_mass": 75354.0, "gene_names": "EDA18;EDA18;F19I3.15;F19I3_15;embryo sac development arrest 18", "protein_name": "", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B041", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B041" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B041", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B041" } ], "pmid": "" } ], "biological_process": [ { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B041", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B041" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B041", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B041" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8B041-1", "start_pos": "267", "end_pos": "267", "site_lbl": "Ser267", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIX4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIX4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B047-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B047", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B047" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 129, "chemical_mass": 14181.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B047", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B047" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B048-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B048", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B048" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 251, "chemical_mass": 29785.0, "gene_names": "EDA12;EDA12;F11F19.14;F11F19_14;embryo sac development arrest 12", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B048", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B048" } ], "pmid": "" } ], "biological_process": [ { "name": "megagametogenesis", "id": "GO:0009561", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009561", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B048", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B048" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B064-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B064", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B064" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 61, "chemical_mass": 6855.0, "gene_names": "", "protein_name": "", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B096-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B096", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B096" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1386, "chemical_mass": 158985.0, "gene_names": "F6P23.20;F6P23_20", "protein_name": "", "disease": [], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B096", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B096" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B096", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B096" } ], "pmid": "" } ], "molecular_function": [ { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B096", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B096" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B096", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B096" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8B096-1", "start_pos": "1297", "end_pos": "1297", "site_lbl": "Ser1297", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMF0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMF0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B096-1", "start_pos": "1298", "end_pos": "1298", "site_lbl": "Ser1298", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMF0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMF0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B096-1", "start_pos": "1300", "end_pos": "1300", "site_lbl": "Tyr1300", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMF0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMF0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B096-1", "start_pos": "684", "end_pos": "684", "site_lbl": "Ser684", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMF0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMF0" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0A1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0A1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0A1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 254, "chemical_mass": 29962.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0A1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0A1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0A1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0A1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0B8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0B8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 200, "chemical_mass": 22768.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0B8" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0B8" } ], "pmid": "" } ], "molecular_function": [ { "name": "membrane insertase activity", "id": "GO:0032977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032977", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0B8" } ], "pmid": "" } ], "biological_process": [ { "name": "protein insertion into mitochondrial inner membrane from matrix", "id": "GO:0032979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032979", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0B8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0G0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0G0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0G0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 78, "chemical_mass": 9358.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0G0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0G0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0G6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0G6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0G6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 319, "chemical_mass": 35909.0, "gene_names": "T7F6.6;T7F6_6", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0G6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0G6" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0G6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0G6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8B0G6-1", "start_pos": "120", "end_pos": "120", "site_lbl": "Thr120", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV17", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV17" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0H2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0H2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0H2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 402, "chemical_mass": 43698.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0H2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0H2" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0H2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0H2" } ], "pmid": "" } ], "molecular_function": [ { "name": "aspartic-type endopeptidase activity", "id": "GO:0004190", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004190", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0H2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0H2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0J4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0J4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0J4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 293, "chemical_mass": 33557.0, "gene_names": "T28I24.5;T28I24_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0J4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0J4" } ], "pmid": "" } ], "molecular_function": [ { "name": "palmitoyl-(protein) hydrolase activity", "id": "GO:0008474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008474", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0J4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0J4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0Q4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 477, "chemical_mass": 52419.0, "gene_names": "F12A24.16;F12A24_16", "protein_name": "", "disease": [], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q4" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q4" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0K8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0K8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0K8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 420, "chemical_mass": 47279.0, "gene_names": "PBL38;T7F6.28;T7F6_28", "protein_name": "non-specific serine/threonine protein kinase", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0K8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0K8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0K8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0K8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0K8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0K8" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0K8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0K8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0L2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0L2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1592, "chemical_mass": 177241.0, "gene_names": "F12L6.24;F12L6_24", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0L2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0L2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Thr66", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 66, "start_aa": "Thr", "end_pos": 66, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr66", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "1175", "end_pos": "1175", "site_lbl": "Thr1175", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "120", "end_pos": "120", "site_lbl": "Thr120", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "122", "end_pos": "122", "site_lbl": "Thr122", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Ser123", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "1553", "end_pos": "1553", "site_lbl": "Ser1553", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Ser369", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "36", "end_pos": "36", "site_lbl": "Ser36", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "653", "end_pos": "653", "site_lbl": "Ser653", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "684", "end_pos": "684", "site_lbl": "Ser684", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8B0L2-1", "start_pos": "699", "end_pos": "699", "site_lbl": "Ser699", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVX7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0P5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0P5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0P5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 321, "chemical_mass": 34548.0, "gene_names": "", "protein_name": "", "disease": [], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0P5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0P5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0U6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 186, "chemical_mass": 21681.0, "gene_names": "T2G17.24;T2G17_24", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U6" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0Q6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 50, "chemical_mass": 5815.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0Q6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Q6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0S1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0S1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0S1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 109, "chemical_mass": 11794.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0S1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0S1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0U4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 353, "chemical_mass": 39679.0, "gene_names": "F3K23.27;F3K23_27", "protein_name": "", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0U4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0U4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0V4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 67, "chemical_mass": 7699.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q42546-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 353, "chemical_mass": 37564.0, "gene_names": "SAL1;ALTERED EXPRESSION OF APX2 8;ALX8;ATSAL1;AtFRY1;FIERY1;FRY1;HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2;HOS2;MBM17.8;MBM17_8;RON1;ROTUNDA 1;SAL1;SUPO1;suppressors of PIN1 overexpression 1", "protein_name": "3'(2'),5'-bisphosphate nucleotidase 1", "disease": [], "molecular_function": [ { "name": "inositol-1,4-bisphosphate 1-phosphatase activity", "id": "GO:0004441", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004441", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "3'(2'),5'-bisphosphate nucleotidase activity", "id": "GO:0008441", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008441", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" } ], "biological_process": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "regulation of circadian rhythm", "id": "GO:0042752", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042752", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "phosphatidylinositol-mediated signaling", "id": "GO:0048015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048015", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "negative regulation of signal transduction", "id": "GO:0009968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009968", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "detection of oxidative stress", "id": "GO:0070994", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070994", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "RNA catabolic process", "id": "GO:0006401", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006401", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "sulfate assimilation", "id": "GO:0000103", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000103", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "miRNA catabolic process", "id": "GO:0010587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010587", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "photoperiodism, flowering", "id": "GO:0048573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048573", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "response to freezing", "id": "GO:0050826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050826", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "positive regulation of unidimensional cell growth", "id": "GO:0051512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051512", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" }, { "name": "regulation of jasmonic acid biosynthetic process", "id": "GO:0080141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080141", "evidence": [ { "database": "UniProtKB", "id": "Q42546", "url": "https://www.uniprot.org/uniprotkb/Q42546" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV90-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 475, "chemical_mass": 52131.0, "gene_names": "F9K20.24;F9K20_24", "protein_name": "", "disease": [], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "post-translational protein targeting to membrane, translocation", "id": "GO:0031204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031204", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "SRP-dependent cotranslational protein targeting to membrane, translocation", "id": "GO:0006616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006616", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "Sec61 translocon complex", "id": "GO:0005784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005784", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" } ], "molecular_function": [ { "name": "signal sequence binding", "id": "GO:0005048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005048", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "ribosome binding", "id": "GO:0043022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043022", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" }, { "name": "protein transmembrane transporter activity", "id": "GO:0008320", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008320", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV90", "url": "https://www.uniprot.org/uniprotkb/Q9ZV90" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZPZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 528, "chemical_mass": 62091.0, "gene_names": "GAUT2;F13A10.1;GALACTURONOSYLTRANSFERASE 2;GAUT2;LGT2;galacturonosyltransferase 2", "protein_name": "Putative galacturonosyltransferase 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "pmid": "" } ], "biological_process": [ { "name": "cell wall organization", "id": "GO:0071555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071555", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "pmid": "" }, { "name": "pectin biosynthetic process", "id": "GO:0045489", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045489", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "polygalacturonate 4-alpha-galacturonosyltransferase activity", "id": "GO:0047262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047262", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ1", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZPZ1-1", "start_pos": "110", "end_pos": "110", "site_lbl": "Tyr110", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ1" } ] } ] }, { "uniprot_canonical_ac": "Q9ZPZ1-1", "start_pos": "111", "end_pos": "111", "site_lbl": "Ser111", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ51-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 677, "chemical_mass": 77618.0, "gene_names": "RGIL6;T9I22.6;T9I22_6", "protein_name": "rhamnogalacturonan endolyase", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" }, { "name": "rhamnogalacturonan endolyase activity", "id": "GO:0102210", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102210", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" }, { "name": "lyase activity", "id": "GO:0016829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ51", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ51" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQ51-1", "start_pos": "222", "end_pos": "222", "site_lbl": "Ser222", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQ51", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQ51" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQ51-1", "start_pos": "225", "end_pos": "225", "site_lbl": "Tyr225", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQ51", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQ51" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZR04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 302, "chemical_mass": 34668.0, "gene_names": "CYCD6-1;CYCD6;1;CYCD6:1;CYCD6;Cyclin D6:1;Cyclin D6;F4C21.20;F4C21_20", "protein_name": "Putative cyclin-D6-1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" }, { "name": "cyclin-dependent protein kinase holoenzyme complex", "id": "GO:0000307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000307", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" } ], "biological_process": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" }, { "name": "G1/S transition of mitotic cell cycle", "id": "GO:0000082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000082", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" } ], "molecular_function": [ { "name": "cyclin-dependent protein serine/threonine kinase regulator activity", "id": "GO:0016538", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016538", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR04", "url": "https://www.uniprot.org/uniprotkb/Q9ZR04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUH3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 361, "chemical_mass": 39174.0, "gene_names": "PUP5;ATPUP5;F27D4.13;F27D4_13;PUP11;PUP5;purine permease 5", "protein_name": "Probable purine permease 5", "disease": [], "molecular_function": [ { "name": "purine nucleoside transmembrane transporter activity", "id": "GO:0015211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015211", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" }, { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" }, { "name": "purine nucleobase transmembrane transporter activity", "id": "GO:0005345", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005345", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" } ], "biological_process": [ { "name": "purine nucleobase transport", "id": "GO:0006863", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006863", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW89-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 453, "chemical_mass": 51930.0, "gene_names": "F5A8.9;F5A8_9", "protein_name": "RING-type E3 ubiquitin transferase BRCA1", "disease": [], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" }, { "name": "SUMO binding", "id": "GO:0032183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032183", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" } ], "cellular_component": [ { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" } ], "biological_process": [ { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW89", "url": "https://www.uniprot.org/uniprotkb/Q9ZW89" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVT9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVT9", "url": "https://www.uniprot.org/uniprotkb/Q9ZVT9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1020, "chemical_mass": 114205.0, "gene_names": "F15K9.2;F15K9_2", "protein_name": "C2 and GRAM domain-containing protein At1g03370", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVT9", "url": "https://www.uniprot.org/uniprotkb/Q9ZVT9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVT9", "url": "https://www.uniprot.org/uniprotkb/Q9ZVT9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVT9", "url": "https://www.uniprot.org/uniprotkb/Q9ZVT9" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVT9", "url": "https://www.uniprot.org/uniprotkb/Q9ZVT9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVT9-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Ser129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVT9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVT9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVT9-1", "start_pos": "145", "end_pos": "145", "site_lbl": "Ser145", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVT9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVT9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVT9-1", "start_pos": "161", "end_pos": "161", "site_lbl": "Ser161", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVT9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVT9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVT9-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Ser198", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVT9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVT9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW15-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW15", "url": "https://www.uniprot.org/uniprotkb/Q9ZW15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 269, "chemical_mass": 28777.0, "gene_names": "F16P2.30;F16P2_30", "protein_name": "Tropinone reductase homolog At2g29320", "disease": [], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW15", "url": "https://www.uniprot.org/uniprotkb/Q9ZW15" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW14-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW14", "url": "https://www.uniprot.org/uniprotkb/Q9ZW14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 262, "chemical_mass": 28089.0, "gene_names": "F16P2.31;F16P2_31", "protein_name": "Tropinone reductase homolog At2g29310", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW14", "url": "https://www.uniprot.org/uniprotkb/Q9ZW14" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW14", "url": "https://www.uniprot.org/uniprotkb/Q9ZW14" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW14", "url": "https://www.uniprot.org/uniprotkb/Q9ZW14" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVX4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 478, "chemical_mass": 53747.0, "gene_names": "UGT90A1;F12A24.7;F12A24_7", "protein_name": "UDP-glycosyltransferase 90A1", "disease": [], "molecular_function": [ { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX4" } ], "pmid": "" }, { "name": "UDP-glycosyltransferase activity", "id": "GO:0008194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008194", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX4" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVX4-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Tyr151", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX4" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVX4-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Thr42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX4" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVX4-1", "start_pos": "430", "end_pos": "430", "site_lbl": "Thr430", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVX4-1", "start_pos": "44", "end_pos": "44", "site_lbl": "Thr44", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX4" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQR4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 423, "chemical_mass": 47314.0, "gene_names": "CBSDUF3;T13P21.10;T13P21_10", "protein_name": "DUF21 domain-containing protein At2g14520", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4" } ], "pmid": "" } ], "biological_process": [ { "name": "magnesium ion homeostasis", "id": "GO:0010960", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010960", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQR4-1", "start_pos": "273", "end_pos": "273", "site_lbl": "Asn273", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 273, "start_aa": "Asn", "end_pos": 273, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn273", "evidence": [ { "id": "Q9ZQR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR4-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Asn322", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 322, "start_aa": "Asn", "end_pos": 322, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn322", "evidence": [ { "id": "Q9ZQR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR4-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Ser337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQR4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQR4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR4-1", "start_pos": "354", "end_pos": "354", "site_lbl": "Ser354", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQR4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQR4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV34-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 249, "chemical_mass": 27018.0, "gene_names": "F8N16.8;F8N16_8", "protein_name": "", "disease": [], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "pmid": "" } ], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV34", "url": "https://www.uniprot.org/uniprotkb/Q9ZV34" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8B0V7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 390, "chemical_mass": 43512.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V7" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V7" } ], "pmid": "" } ], "molecular_function": [ { "name": "peptidase activity", "id": "GO:0008233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008233", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQH1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQH1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 228, "chemical_mass": 26130.0, "gene_names": "CML48;F10A12.16;F10A12_16", "protein_name": "Probable calcium-binding protein CML48", "disease": [], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQH1" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQH1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQX7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 248, "chemical_mass": 28221.0, "gene_names": "LFG3;AtLFG3;LFG3;LIFEGUARD 3;T10P11.23;T10P11_23", "protein_name": "Protein LIFEGUARD 3", "disease": [], "molecular_function": [ { "name": "calcium channel activity", "id": "GO:0005262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005262", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "pmid": "" } ], "biological_process": [ { "name": "endoplasmic reticulum unfolded protein response", "id": "GO:0030968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030968", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "pmid": "" }, { "name": "cellular response to unfolded protein", "id": "GO:0034620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034620", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU79-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 344, "chemical_mass": 39121.0, "gene_names": "", "protein_name": "RNA exonuclease 4", "disease": [], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" }, { "name": "exonuclease activity", "id": "GO:0004527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004527", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" }, { "name": "3'-5' exonuclease activity", "id": "GO:0008408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008408", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU79", "url": "https://www.uniprot.org/uniprotkb/Q9ZU79" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU79-1", "start_pos": "108", "end_pos": "108", "site_lbl": "Ser108", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU79" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU79-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Ser57", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU79" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZPW9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW9", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 116, "chemical_mass": 11789.0, "gene_names": "LTP8;T30D6.12;T30D6_12", "protein_name": "Non-specific lipid-transfer protein 8", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW9", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW9" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW9", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW9" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW9", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZPX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 208, "chemical_mass": 23027.0, "gene_names": "GATA20;GATA transcription factor 20;GATA20;HANL1;T30D6.11;T30D6_11;hanaba taranu like 1", "protein_name": "GATA transcription factor 20", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPX0", "url": "https://www.uniprot.org/uniprotkb/Q9ZPX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZPZ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 179, "chemical_mass": 19947.0, "gene_names": "T31J12.3;T31J12_3", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" } ], "biological_process": [ { "name": "endoplasmic reticulum unfolded protein response", "id": "GO:0030968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030968", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZPZ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZPZ4-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Thr123", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZPZ4-1", "start_pos": "125", "end_pos": "125", "site_lbl": "Thr125", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9ZPZ4-1", "start_pos": "157", "end_pos": "157", "site_lbl": "Ser157", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ26-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 440, "chemical_mass": 50352.0, "gene_names": "T28I24.15;T28I24_15", "protein_name": "", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ26", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ26" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ34-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 408, "chemical_mass": 45926.0, "gene_names": "T28I24.6", "protein_name": "Uncharacterized protein At2g24330", "disease": [], "biological_process": [ { "name": "endoplasmic reticulum tubular network organization", "id": "GO:0071786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071786", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" }, { "name": "endoplasmic reticulum cisternal network assembly", "id": "GO:0071784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071784", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" }, { "name": "endoplasmic reticulum tubular network", "id": "GO:0071782", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071782", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" } ], "molecular_function": [ { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ34", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ34" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQ34-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Thr195", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQ34", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQ34" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ87-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 356, "chemical_mass": 40596.0, "gene_names": "T4M8.5;T4M8_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" } ], "molecular_function": [ { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" }, { "name": "cholesterol binding", "id": "GO:0015485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015485", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" } ], "biological_process": [ { "name": "SREBP signaling pathway", "id": "GO:0032933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032933", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ87", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ87" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ91-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ91", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ91" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 312, "chemical_mass": 34750.0, "gene_names": "CXE7;T4M8.1;T4M8_1", "protein_name": "Probable carboxylesterase 7", "disease": [], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ91", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ91" } ], "pmid": "" }, { "name": "carboxylesterase activity", "id": "GO:0106435", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106435", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ91", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ91" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQ91-1", "start_pos": "159", "end_pos": "159", "site_lbl": "Ser159", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQ91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQ91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ96-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ96", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ96" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 496, "chemical_mass": 55936.0, "gene_names": "UGT73C3;F13K3.18;F13K3_18", "protein_name": "UDP-glycosyltransferase 73C3", "disease": [], "biological_process": [ { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ96", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ96" } ], "pmid": "" } ], "molecular_function": [ { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ96", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ96" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ96", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ96" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ97-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ97", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 496, "chemical_mass": 55907.0, "gene_names": "UGT73C4;F13K3.17;F13K3_17", "protein_name": "UDP-glycosyltransferase 73C4", "disease": [], "biological_process": [ { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ97", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ97" } ], "pmid": "" } ], "molecular_function": [ { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ97", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ97" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ97", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ97" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQ98-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ98", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 496, "chemical_mass": 55992.0, "gene_names": "UGT73C2;F13K3.16;F13K3_16;UDP-glucosyl transferase 73C2;UGT73C2", "protein_name": "UDP-glycosyltransferase 73C2", "disease": [], "molecular_function": [ { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ98", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ98" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ98", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ98" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQA1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQA1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQA1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 501, "chemical_mass": 56951.0, "gene_names": "PCMP-E44;F13K3.13;F13K3_13", "protein_name": "Pentatricopeptide repeat-containing protein At2g36730", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQA1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQA1" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQA1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQA1" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQA1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQA1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQA1-1", "start_pos": "77", "end_pos": "77", "site_lbl": "Thr77", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 77, "start_aa": "Thr", "end_pos": 77, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr77", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQC0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 106, "chemical_mass": 12253.0, "gene_names": "F1K3.2;F1K3_2", "protein_name": "DNA-directed RNA polymerase subunit", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" }, { "name": "RNA polymerase III complex", "id": "GO:0005666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005666", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" }, { "name": "DNA-directed RNA polymerase activity", "id": "GO:0003899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003899", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" }, { "name": "termination of RNA polymerase III transcription", "id": "GO:0006386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006386", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQC0", "url": "https://www.uniprot.org/uniprotkb/Q9ZQC0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQE6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQE6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQE6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 187, "chemical_mass": 21220.0, "gene_names": "CML30;AtCML30;CML30;F9O13.23;calmodulin-like 30", "protein_name": "Calmodulin-like protein 30", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQE6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQE6" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQE6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQE6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQE6-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Ser32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQE6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQE6-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQE6-1", "start_pos": "47", "end_pos": "47", "site_lbl": "Ser47", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQE6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQE6-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Ser67", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQE6" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQE6-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Thr69", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQE6" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQF1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQF1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQF1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 627, "chemical_mass": 71046.0, "gene_names": "F9O13.18", "protein_name": "Pentatricopeptide repeat-containing protein At2g15630, mitochondrial", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQF1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQF1" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQF1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQF1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQF1-1", "start_pos": "15", "end_pos": "15", "site_lbl": "Ser15", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQF1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQF1-1", "start_pos": "18", "end_pos": "18", "site_lbl": "Ser18", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQF1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQF1-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Tyr22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQF1" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQF1-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Thr5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQF1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQI3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 394, "chemical_mass": 43854.0, "gene_names": "F12K2.6", "protein_name": "GDSL esterase/lipase At2g27360", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "pmid": "" }, { "name": "xyloglucan metabolic process", "id": "GO:0010411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010411", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "pmid": "" } ], "molecular_function": [ { "name": "acetylxylan esterase activity", "id": "GO:0046555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046555", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQI3-1", "start_pos": "136", "end_pos": "136", "site_lbl": "Asn136", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 136, "start_aa": "Asn", "end_pos": 136, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn136", "evidence": [ { "id": "Q9ZQI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQI3-1", "start_pos": "319", "end_pos": "319", "site_lbl": "Asn319", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 319, "start_aa": "Asn", "end_pos": 319, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn319", "evidence": [ { "id": "Q9ZQI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQI3-1", "start_pos": "371", "end_pos": "371", "site_lbl": "Asn371", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 371, "start_aa": "Asn", "end_pos": 371, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn371", "evidence": [ { "id": "Q9ZQI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQI3-1", "start_pos": "382", "end_pos": "382", "site_lbl": "Asn382", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 382, "start_aa": "Asn", "end_pos": 382, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn382", "evidence": [ { "id": "Q9ZQI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI3#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQP6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 580, "chemical_mass": 63172.0, "gene_names": "INT3;ATINT3;INT3;NOSITOL TRANSPORTER 3;T20F21.7;T20F21_7;nositol transporter 3", "protein_name": "Probable inositol transporter 3", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" } ], "biological_process": [ { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" }, { "name": "myo-inositol transport", "id": "GO:0015798", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015798", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" } ], "molecular_function": [ { "name": "myo-inositol:proton symporter activity", "id": "GO:0005366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005366", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 412, "chemical_mass": 46462.0, "gene_names": "TBL13;T13P21.9;T13P21_9;TBL13;TRICHOME BIREFRINGENCE-LIKE 13", "protein_name": "Protein trichome birefringence-like 13", "disease": [], "cellular_component": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR5" } ], "pmid": "" } ], "molecular_function": [ { "name": "O-acetyltransferase activity", "id": "GO:0016413", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016413", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQX8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX8", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1111, "chemical_mass": 127710.0, "gene_names": "NET1C;NET1C;Networked 1C;T10P11.22;T10P11_22", "protein_name": "Protein NETWORKED 1C", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX8", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX8", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX8" } ], "pmid": "" } ], "molecular_function": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX8", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQX8-1", "start_pos": "1010", "end_pos": "1010", "site_lbl": "Thr1010", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQX8-1", "start_pos": "1110", "end_pos": "1110", "site_lbl": "Ser1110", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQX8-1", "start_pos": "643", "end_pos": "643", "site_lbl": "Thr643", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQX8-1", "start_pos": "886", "end_pos": "886", "site_lbl": "Ser886", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQX8-1", "start_pos": "957", "end_pos": "957", "site_lbl": "Ser957", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX8" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZR02-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZR02", "url": "https://www.uniprot.org/uniprotkb/Q9ZR02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 154, "chemical_mass": 17590.0, "gene_names": "CML6;F4C21.22;F4C21_22", "protein_name": "Calmodulin-like protein 6", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR02", "url": "https://www.uniprot.org/uniprotkb/Q9ZR02" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR02", "url": "https://www.uniprot.org/uniprotkb/Q9ZR02" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR02", "url": "https://www.uniprot.org/uniprotkb/Q9ZR02" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZR14-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZR14", "url": "https://www.uniprot.org/uniprotkb/Q9ZR14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 250, "chemical_mass": 29234.0, "gene_names": "F4C21.9", "protein_name": "Putative B3 domain-containing protein At4g03170", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR14", "url": "https://www.uniprot.org/uniprotkb/Q9ZR14" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR14", "url": "https://www.uniprot.org/uniprotkb/Q9ZR14" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR14", "url": "https://www.uniprot.org/uniprotkb/Q9ZR14" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZR15-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZR15", "url": "https://www.uniprot.org/uniprotkb/Q9ZR15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 192, "chemical_mass": 22310.0, "gene_names": "F4C21.8", "protein_name": "Putative B3 domain-containing protein At4g03160", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR15", "url": "https://www.uniprot.org/uniprotkb/Q9ZR15" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR15", "url": "https://www.uniprot.org/uniprotkb/Q9ZR15" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZR15", "url": "https://www.uniprot.org/uniprotkb/Q9ZR15" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZS88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZS88", "url": "https://www.uniprot.org/uniprotkb/Q9ZS88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 244, "chemical_mass": 28098.0, "gene_names": "DER2.2;DER2.2;DERLIN-2.2;T4B21.2;T4B21_2", "protein_name": "Derlin-2.2", "disease": [], "molecular_function": [ { "name": "signal recognition particle binding", "id": "GO:0005047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005047", "evidence": [ { "database": "UniProtKB", "id": "Q9ZS88", "url": "https://www.uniprot.org/uniprotkb/Q9ZS88" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZS88", "url": "https://www.uniprot.org/uniprotkb/Q9ZS88" } ], "pmid": "" } ], "biological_process": [ { "name": "endoplasmic reticulum unfolded protein response", "id": "GO:0030968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030968", "evidence": [ { "database": "UniProtKB", "id": "Q9ZS88", "url": "https://www.uniprot.org/uniprotkb/Q9ZS88" } ], "pmid": "" }, { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "Q9ZS88", "url": "https://www.uniprot.org/uniprotkb/Q9ZS88" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZSH7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZSH7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 190, "chemical_mass": 22122.0, "gene_names": "T15B16.18", "protein_name": "B3 domain-containing protein At4g01580", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZSH7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZSH7" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZSH7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZSI6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 280, "chemical_mass": 31465.0, "gene_names": "T15B16.5;T15B16_5", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" }, { "name": "chitin catabolic process", "id": "GO:0006032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006032", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" }, { "name": "cell wall macromolecule catabolic process", "id": "GO:0016998", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016998", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" }, { "name": "response to oomycetes", "id": "GO:0002239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002239", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" } ], "molecular_function": [ { "name": "chitinase activity", "id": "GO:0004568", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004568", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZSP6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 108, "chemical_mass": 11194.0, "gene_names": "AIR1B;T1P17", "protein_name": "Putative lipid-binding protein AIR1B", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSP6", "url": "https://www.uniprot.org/uniprotkb/Q9ZSP6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZT81-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZT81", "url": "https://www.uniprot.org/uniprotkb/Q9ZT81" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 164, "chemical_mass": 17670.0, "gene_names": "F9H3.17;T5L23.3", "protein_name": "CASP-like protein 1C1", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT81", "url": "https://www.uniprot.org/uniprotkb/Q9ZT81" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZTA2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 399, "chemical_mass": 44221.0, "gene_names": "AOP2;T4I9.6", "protein_name": "Probable inactive 2-oxoglutarate-dependent dioxygenase AOP2", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA2" } ], "pmid": "" }, { "name": "2-oxoglutarate-dependent dioxygenase activity", "id": "GO:0016706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016706", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA2" } ], "pmid": "" } ], "biological_process": [ { "name": "root regeneration", "id": "GO:0062211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062211", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZTA3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 322, "chemical_mass": 36912.0, "gene_names": "AOP1;AOP1.1;AOP1;AOP;T4I9.5;T4I9_5", "protein_name": "Probable 2-oxoglutarate-dependent dioxygenase AOP1", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA3" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA3" } ], "pmid": "" }, { "name": "2-oxoglutarate-dependent dioxygenase activity", "id": "GO:0016706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016706", "evidence": [ { "database": "UniProtKB", "id": "Q9ZTA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZTA3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU07-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 496, "chemical_mass": 56732.0, "gene_names": "CYP71B12;''cytochrome P450;CYP71B12;F21J6.2;cytochrome P450;family 71;polypeptide 12'';polypeptide 12;subfamily B", "protein_name": "Cytochrome P450 71B12", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "monooxygenase activity", "id": "GO:0004497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004497", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "id": "GO:0016705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016705", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU07", "url": "https://www.uniprot.org/uniprotkb/Q9ZU07" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU13-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU13", "url": "https://www.uniprot.org/uniprotkb/Q9ZU13" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 483, "chemical_mass": 53569.0, "gene_names": "JAL13;F5F19.19;F5F19_19", "protein_name": "Jacalin-related lectin 13", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU13", "url": "https://www.uniprot.org/uniprotkb/Q9ZU13" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU13", "url": "https://www.uniprot.org/uniprotkb/Q9ZU13" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU13-1", "start_pos": "207", "end_pos": "207", "site_lbl": "Thr207", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 207, "start_aa": "Thr", "end_pos": 207, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr207", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU23-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU23", "url": "https://www.uniprot.org/uniprotkb/Q9ZU23" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 730, "chemical_mass": 73939.0, "gene_names": "JAL5;F5F19.6;F5F19_6", "protein_name": "Jacalin-related lectin 5", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU23", "url": "https://www.uniprot.org/uniprotkb/Q9ZU23" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU23", "url": "https://www.uniprot.org/uniprotkb/Q9ZU23" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU23", "url": "https://www.uniprot.org/uniprotkb/Q9ZU23" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU23-1", "start_pos": "24", "end_pos": "24", "site_lbl": "Ser24", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU23", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU23" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU23-1", "start_pos": "2", "end_pos": "2", "site_lbl": "Ser2", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU23", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU23" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU23-1", "start_pos": "633", "end_pos": "633", "site_lbl": "Thr633", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU23", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU23" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU30-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU30", "url": "https://www.uniprot.org/uniprotkb/Q9ZU30" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 252, "chemical_mass": 29437.0, "gene_names": "F10A8.25", "protein_name": "Probable transcription factor At2g01370", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU30", "url": "https://www.uniprot.org/uniprotkb/Q9ZU30" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU30", "url": "https://www.uniprot.org/uniprotkb/Q9ZU30" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU30", "url": "https://www.uniprot.org/uniprotkb/Q9ZU30" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU30-1", "start_pos": "175", "end_pos": "175", "site_lbl": "Thr175", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU30", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU30" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU43-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU43", "url": "https://www.uniprot.org/uniprotkb/Q9ZU43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 191, "chemical_mass": 21859.0, "gene_names": "RTNLB15;F10A8.12", "protein_name": "Reticulon-like protein B15", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU43", "url": "https://www.uniprot.org/uniprotkb/Q9ZU43" } ], "pmid": "" } ], "biological_process": [ { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU43", "url": "https://www.uniprot.org/uniprotkb/Q9ZU43" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU67", "url": "https://www.uniprot.org/uniprotkb/Q9ZU67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 418, "chemical_mass": 47328.0, "gene_names": "F24H14.13", "protein_name": "Pentatricopeptide repeat-containing protein At2g18520, mitochondrial", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU67", "url": "https://www.uniprot.org/uniprotkb/Q9ZU67" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU67", "url": "https://www.uniprot.org/uniprotkb/Q9ZU67" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU67-1", "start_pos": "15", "end_pos": "15", "site_lbl": "Ser15", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU67" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU67-1", "start_pos": "16", "end_pos": "16", "site_lbl": "Thr16", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU67" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU67-1", "start_pos": "18", "end_pos": "18", "site_lbl": "Thr18", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU67" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU67-1", "start_pos": "27", "end_pos": "27", "site_lbl": "Tyr27", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU67" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU67-1", "start_pos": "34", "end_pos": "34", "site_lbl": "Ser34", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU67" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU72-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU72", "url": "https://www.uniprot.org/uniprotkb/Q9ZU72" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 470, "chemical_mass": 51913.0, "gene_names": "UGT72D1;F24H14.8;F24H14_8", "protein_name": "UDP-glycosyltransferase 72D1", "disease": [], "molecular_function": [ { "name": "UDP-glycosyltransferase activity", "id": "GO:0008194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008194", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU72", "url": "https://www.uniprot.org/uniprotkb/Q9ZU72" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU72", "url": "https://www.uniprot.org/uniprotkb/Q9ZU72" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU88", "url": "https://www.uniprot.org/uniprotkb/Q9ZU88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 481, "chemical_mass": 55040.0, "gene_names": "T9J23.15", "protein_name": "Pentatricopeptide repeat-containing protein At2g48000", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU88", "url": "https://www.uniprot.org/uniprotkb/Q9ZU88" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU88", "url": "https://www.uniprot.org/uniprotkb/Q9ZU88" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU88", "url": "https://www.uniprot.org/uniprotkb/Q9ZU88" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU88-1", "start_pos": "185", "end_pos": "185", "site_lbl": "Thr185", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 185, "start_aa": "Thr", "end_pos": 185, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr185", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZU97-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 743, "chemical_mass": 83912.0, "gene_names": "VAC14;VAC1;T8O11.14;T8O11_14", "protein_name": "Protein VAC14 homolog", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "PAS complex", "id": "GO:0070772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070772", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" } ], "biological_process": [ { "name": "phosphatidylinositol biosynthetic process", "id": "GO:0006661", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006661", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "vacuole organization", "id": "GO:0007033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007033", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "Q9ZU97", "url": "https://www.uniprot.org/uniprotkb/Q9ZU97" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZU97-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Thr78", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 78, "start_aa": "Thr", "end_pos": 78, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr78", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU97-1", "start_pos": "623", "end_pos": "623", "site_lbl": "Thr623", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU97", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU97" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU97-1", "start_pos": "624", "end_pos": "624", "site_lbl": "Ser624", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU97", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU97" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZU97-1", "start_pos": "629", "end_pos": "629", "site_lbl": "Ser629", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU97", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU97" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUA3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 629, "chemical_mass": 69772.0, "gene_names": "MAP70-3;MAP70.3;ATMAP70-3;T8O11.8;T8O11_8", "protein_name": "Microtubule-associated protein 70-3", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "pmid": "" }, { "name": "cortical microtubule, transverse to long axis", "id": "GO:0010005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010005", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "pmid": "" } ], "biological_process": [ { "name": "cytoskeleton organization", "id": "GO:0007010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007010", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Thr32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "34", "end_pos": "34", "site_lbl": "Ser34", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Ser35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "36", "end_pos": "36", "site_lbl": "Ser36", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "409", "end_pos": "409", "site_lbl": "Ser409", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Ser417", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Ser437", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "439", "end_pos": "439", "site_lbl": "Ser439", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "444", "end_pos": "444", "site_lbl": "Ser444", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "494", "end_pos": "494", "site_lbl": "Ser494", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Ser498", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUA3-1", "start_pos": "54", "end_pos": "54", "site_lbl": "Ser54", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUA3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUA3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA9", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 697, "chemical_mass": 79480.0, "gene_names": "T8O11.2", "protein_name": "PHD finger protein At2g01810", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA9", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA9", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA9" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUA9", "url": "https://www.uniprot.org/uniprotkb/Q9ZUA9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUB8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 475, "chemical_mass": 52947.0, "gene_names": "SKIP22;F5O8.33;F5O8_33", "protein_name": "F-box protein SKIP22", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB8" } ], "pmid": "" } ], "biological_process": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUE4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUE4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUE4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 345, "chemical_mass": 37472.0, "gene_names": "F28C11.13;F5O8.6", "protein_name": "GDSL esterase/lipase At1g23500", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUE4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUE4" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipase activity", "id": "GO:0016298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016298", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUE4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUE4" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUE4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUE4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUE4-1", "start_pos": "103", "end_pos": "103", "site_lbl": "Asn103", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 103, "start_aa": "Asn", "end_pos": 103, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn103", "evidence": [ { "id": "Q9ZUE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUE4#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUH1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 441, "chemical_mass": 49167.0, "gene_names": "F27D4.15", "protein_name": "BTB/POZ domain-containing protein At2g24240", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH1" } ], "pmid": "" } ], "biological_process": [ { "name": "protein homooligomerization", "id": "GO:0051260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051260", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH1" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH1" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUI4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 302, "chemical_mass": 32699.0, "gene_names": "T2K10.14;T2K10_14", "protein_name": "Ribosomal RNA-processing protein 43", "disease": [], "biological_process": [ { "name": "nuclear mRNA surveillance", "id": "GO:0071028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071028", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "U1 snRNA 3'-end processing", "id": "GO:0034473", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034473", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "U5 snRNA 3'-end processing", "id": "GO:0034476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034476", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "rRNA catabolic process", "id": "GO:0016075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016075", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000467", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "U4 snRNA 3'-end processing", "id": "GO:0034475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034475", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent rRNA catabolic process", "id": "GO:0071035", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071035", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "TRAMP-dependent tRNA surveillance pathway", "id": "GO:0071038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071038", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "nuclear exosome (RNase complex)", "id": "GO:0000176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000176", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" }, { "name": "cytoplasmic exosome (RNase complex)", "id": "GO:0000177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000177", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" } ], "molecular_function": [ { "name": "mRNA 3'-UTR AU-rich region binding", "id": "GO:0035925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035925", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUI8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 374, "chemical_mass": 41135.0, "gene_names": "T2K10.10;T2K10_10;UMAMIT35;Usually multiple acids move in and out Transporters 35", "protein_name": "WAT1-related protein At1g60050", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI8" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUK3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 983, "chemical_mass": 109407.0, "gene_names": "RLP19;AtRLP19;RLP19;T15J14.12;T15J14_12;receptor like protein 19", "protein_name": "Receptor-like protein 19", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Asn137", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 137, "start_aa": "Asn", "end_pos": 137, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn137", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "158", "end_pos": "158", "site_lbl": "Asn158", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 158, "start_aa": "Asn", "end_pos": 158, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn158", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "171", "end_pos": "171", "site_lbl": "Asn171", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 171, "start_aa": "Asn", "end_pos": 171, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn171", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "190", "end_pos": "190", "site_lbl": "Asn190", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 190, "start_aa": "Asn", "end_pos": 190, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn190", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Asn195", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 195, "start_aa": "Asn", "end_pos": 195, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn195", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "206", "end_pos": "206", "site_lbl": "Asn206", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 206, "start_aa": "Asn", "end_pos": 206, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn206", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Asn254", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 254, "start_aa": "Asn", "end_pos": 254, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn254", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "278", "end_pos": "278", "site_lbl": "Asn278", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 278, "start_aa": "Asn", "end_pos": 278, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn278", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "347", "end_pos": "347", "site_lbl": "Asn347", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 347, "start_aa": "Asn", "end_pos": 347, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn347", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Asn389", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 389, "start_aa": "Asn", "end_pos": 389, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn389", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "396", "end_pos": "396", "site_lbl": "Asn396", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 396, "start_aa": "Asn", "end_pos": 396, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn396", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Asn402", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 402, "start_aa": "Asn", "end_pos": 402, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn402", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "456", "end_pos": "456", "site_lbl": "Asn456", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 456, "start_aa": "Asn", "end_pos": 456, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn456", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "461", "end_pos": "461", "site_lbl": "Asn461", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 461, "start_aa": "Asn", "end_pos": 461, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn461", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "492", "end_pos": "492", "site_lbl": "Asn492", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 492, "start_aa": "Asn", "end_pos": 492, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn492", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Asn498", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 498, "start_aa": "Asn", "end_pos": 498, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn498", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "555", "end_pos": "555", "site_lbl": "Asn555", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 555, "start_aa": "Asn", "end_pos": 555, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn555", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "558", "end_pos": "558", "site_lbl": "Asn558", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 558, "start_aa": "Asn", "end_pos": 558, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn558", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "590", "end_pos": "590", "site_lbl": "Asn590", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 590, "start_aa": "Asn", "end_pos": 590, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn590", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "616", "end_pos": "616", "site_lbl": "Asn616", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 616, "start_aa": "Asn", "end_pos": 616, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn616", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Asn66", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 66, "start_aa": "Asn", "end_pos": 66, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn66", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "734", "end_pos": "734", "site_lbl": "Asn734", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 734, "start_aa": "Asn", "end_pos": 734, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn734", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "744", "end_pos": "744", "site_lbl": "Asn744", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 744, "start_aa": "Asn", "end_pos": 744, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn744", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "824", "end_pos": "824", "site_lbl": "Asn824", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 824, "start_aa": "Asn", "end_pos": 824, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn824", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUK3-1", "start_pos": "872", "end_pos": "872", "site_lbl": "Asn872", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 872, "start_aa": "Asn", "end_pos": 872, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn872", "evidence": [ { "id": "Q9ZUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUK6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK6", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 123, "chemical_mass": 12995.0, "gene_names": "LTP7;T15J14.9", "protein_name": "Non-specific lipid-transfer protein 7", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK6", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK6" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK6", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK6" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUK6", "url": "https://www.uniprot.org/uniprotkb/Q9ZUK6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUN5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUN5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUN5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 270, "chemical_mass": 30128.0, "gene_names": "TET2;F3P11.18;F3P11_18;TET2;tetraspanin2", "protein_name": "Tetraspanin-2", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUN5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUN5" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUN5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUN5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUN5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUN5" } ], "pmid": "" } ], "biological_process": [ { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUN5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUN5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUN5-1", "start_pos": "118", "end_pos": "118", "site_lbl": "Ser118", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUN5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUN5" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUP0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 120, "chemical_mass": 14210.0, "gene_names": "LBD8;ASL34;F3P11.11;F3P11_11;LBD8;LOB domain-containing protein 8", "protein_name": "LOB domain-containing protein 8", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP0" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP0" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA-binding transcription activator activity", "id": "GO:0001216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001216", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 478, "chemical_mass": 52014.0, "gene_names": "ZETH;F27F23.28", "protein_name": "glucan endo-1,3-beta-D-glucosidase", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" } ], "molecular_function": [ { "name": "glucan endo-1,3-beta-D-glucosidase activity", "id": "GO:0042973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042973", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUS1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 380, "chemical_mass": 41531.0, "gene_names": "F3G5.25;F3G5_25;UMAMIT12;Usually multiple acids move in and out Transporters 12", "protein_name": "WAT1-related protein At2g37460", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS1" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUS1-1", "start_pos": "334", "end_pos": "334", "site_lbl": "Tyr334", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUS1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUS8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 321, "chemical_mass": 34974.0, "gene_names": "MAKR3;F3G5.17;F3G5_17;MAKR3;MEMBRANE-ASSOCIATED KINASE REGULATOR 3", "protein_name": "Probable membrane-associated kinase regulator 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS8" } ], "pmid": "" } ], "molecular_function": [ { "name": "kinase inhibitor activity", "id": "GO:0019210", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019210", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZUS8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUS8-1", "start_pos": "228", "end_pos": "228", "site_lbl": "Ser228", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUS8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUS8" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUT4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 500, "chemical_mass": 56344.0, "gene_names": "PCMP-E50;F3G5.11;F3G5_11", "protein_name": "Pentatricopeptide repeat-containing protein At2g37320", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" }, { "name": "response to cytokinin", "id": "GO:0009735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009735", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" }, { "name": "response to gibberellin", "id": "GO:0009739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT4", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUT5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 657, "chemical_mass": 73343.0, "gene_names": "PCMP-E49;F3G5.10;F3G5_10", "protein_name": "Pentatricopeptide repeat-containing protein At2g37310", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT5" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT5" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUT5", "url": "https://www.uniprot.org/uniprotkb/Q9ZUT5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUU7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 462, "chemical_mass": 52931.0, "gene_names": "F24D13.16;T1E2.3", "protein_name": "Pentatricopeptide repeat-containing protein At2g28050", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUU7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUU7" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUU7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUU7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUU7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUU7" } ], "pmid": "" } ], "biological_process": [ { "name": "mitochondrial mRNA 5'-end processing", "id": "GO:0090617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090617", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUU7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZUU7-1", "start_pos": "149", "end_pos": "149", "site_lbl": "Tyr149", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUU7" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUU7-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Ser156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUU7" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "Q9ZUU7-1", "start_pos": "444", "end_pos": "444", "site_lbl": "Thr444", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUU7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUV0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUV0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 482, "chemical_mass": 53367.0, "gene_names": "UGT86A2;F24D13.13;F24D13_13", "protein_name": "UDP-glycosyltransferase 86A2", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUV0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUV0" } ], "pmid": "" }, { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUV0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUV0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUW3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUW3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUW3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 868, "chemical_mass": 97185.0, "gene_names": "PCMP-H60;F10A12.28;F15K20.29;F15K20_29", "protein_name": "Pentatricopeptide repeat-containing protein At2g27610", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUW3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUW3" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUW3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUW3" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUW3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUW3" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUW3", "url": "https://www.uniprot.org/uniprotkb/Q9ZUW3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZUY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZUY1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 442, "chemical_mass": 50697.0, "gene_names": "F15K20.10", "protein_name": "Pentatricopeptide repeat-containing protein At2g27800, mitochondrial", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUY1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUY1" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUY1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV18-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 70, "chemical_mass": 7622.0, "gene_names": "T7F6.4;T7F6_4", "protein_name": "", "disease": [], "molecular_function": [ { "name": "serine-type endopeptidase inhibitor activity", "id": "GO:0004867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004867", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV18", "url": "https://www.uniprot.org/uniprotkb/Q9ZV18" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV27-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV27", "url": "https://www.uniprot.org/uniprotkb/Q9ZV27" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 156, "chemical_mass": 17928.0, "gene_names": "SMR10;F8N16.16;F8N16_16", "protein_name": "Cyclin-dependent protein kinase inhibitor SMR10", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV27", "url": "https://www.uniprot.org/uniprotkb/Q9ZV27" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein kinase inhibitor activity", "id": "GO:0004860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004860", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV27", "url": "https://www.uniprot.org/uniprotkb/Q9ZV27" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV39-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV39", "url": "https://www.uniprot.org/uniprotkb/Q9ZV39" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 234, "chemical_mass": 26637.0, "gene_names": "MSF3.19", "protein_name": "Putative B3 domain-containing protein At2g18810", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV39", "url": "https://www.uniprot.org/uniprotkb/Q9ZV39" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV39", "url": "https://www.uniprot.org/uniprotkb/Q9ZV39" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV39", "url": "https://www.uniprot.org/uniprotkb/Q9ZV39" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV71-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 409, "chemical_mass": 46483.0, "gene_names": "B3GALT3;T32F6.5;T32F6_5", "protein_name": "Probable beta-1,3-galactosyltransferase 3", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "pmid": "" } ], "molecular_function": [ { "name": "galactosyltransferase activity", "id": "GO:0008378", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008378", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "pmid": "" } ], "biological_process": [ { "name": "glycoprotein biosynthetic process", "id": "GO:0009101", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009101", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "pmid": "" }, { "name": "cellulose biosynthetic process", "id": "GO:0030244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030244", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV71", "url": "https://www.uniprot.org/uniprotkb/Q9ZV71" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZV71-1", "start_pos": "91", "end_pos": "91", "site_lbl": "Thr91", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV71", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV71" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV81-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 150, "chemical_mass": 17038.0, "gene_names": "T25N22.7;T25N22_7", "protein_name": "", "disease": [], "biological_process": [ { "name": "nuclear mRNA surveillance", "id": "GO:0071028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071028", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "rRNA catabolic process", "id": "GO:0016075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016075", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "U4 snRNA 3'-end processing", "id": "GO:0034475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034475", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "poly(A)-dependent snoRNA 3'-end processing", "id": "GO:0071051", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071051", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "exonuclease activity", "id": "GO:0004527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004527", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "nuclear exosome (RNase complex)", "id": "GO:0000176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000176", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "cytoplasmic exosome (RNase complex)", "id": "GO:0000177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000177", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV81", "url": "https://www.uniprot.org/uniprotkb/Q9ZV81" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZV81-1", "start_pos": "84", "end_pos": "84", "site_lbl": "Tyr84", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV81", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV81" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 325, "chemical_mass": 34697.0, "gene_names": "BEH4;BEH4;BES1/BZR1 homolog 4;F9K20.26;F9K20_26", "protein_name": "BES1/BZR1 homolog protein 4", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" }, { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "169", "end_pos": "169", "site_lbl": "Thr169", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 169, "start_aa": "Thr", "end_pos": 169, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr169", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV88", "url": "https://www.uniprot.org/uniprotkb/Q9ZV88" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Thr203", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Ser244", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "252", "end_pos": "252", "site_lbl": "Ser252", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "310", "end_pos": "310", "site_lbl": "Ser310", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Ser322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Ser323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "324", "end_pos": "324", "site_lbl": "Thr324", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q9ZV88-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Thr32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZV88", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZV88" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV89-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 359, "chemical_mass": 40568.0, "gene_names": "TBL42;F9K20.25;F9K20_25;TBL42;TRICHOME BIREFRINGENCE-LIKE 42", "protein_name": "Protein trichome birefringence-like 42", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "pmid": "" } ], "molecular_function": [ { "name": "O-acyltransferase activity", "id": "GO:0008374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008374", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "pmid": "" }, { "name": "O-acetyltransferase activity", "id": "GO:0016413", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016413", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV89", "url": "https://www.uniprot.org/uniprotkb/Q9ZV89" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZV91-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZV91", "url": "https://www.uniprot.org/uniprotkb/Q9ZV91" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 420, "chemical_mass": 48280.0, "gene_names": "F9K20.23;F9K20_23", "protein_name": "Putative FBD-associated F-box protein At1g78730", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZV91", "url": "https://www.uniprot.org/uniprotkb/Q9ZV91" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVA5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 443, "chemical_mass": 49194.0, "gene_names": "F9K20.9", "protein_name": "EP1-like glycoprotein 4", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVA5-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "Q9ZVA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA5-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Asn258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 258, "start_aa": "Asn", "end_pos": 258, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn258", "evidence": [ { "id": "Q9ZVA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA5-1", "start_pos": "269", "end_pos": "269", "site_lbl": "Asn269", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 269, "start_aa": "Asn", "end_pos": 269, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn269", "evidence": [ { "id": "Q9ZVA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA5-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Asn434", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 434, "start_aa": "Asn", "end_pos": 434, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn434", "evidence": [ { "id": "Q9ZVA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA5-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Asn66", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 66, "start_aa": "Asn", "end_pos": 66, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn66", "evidence": [ { "id": "Q9ZVA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVA7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 468, "chemical_mass": 50104.0, "gene_names": "SHOU4;F9K20.7;F9K20_7", "protein_name": "Protein SHOU4", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" }, { "name": "negative regulation of exocytosis", "id": "GO:0045920", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045920", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" }, { "name": "negative regulation of cellulose biosynthetic process", "id": "GO:2001007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001007", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" }, { "name": "negative regulation of endosome to plasma membrane protein transport", "id": "GO:1905750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905750", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" } ], "molecular_function": [ { "name": "peptidase activity", "id": "GO:0008233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008233", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Thr139", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 139, "start_aa": "Thr", "end_pos": 139, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr139", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "154", "end_pos": "154", "site_lbl": "Asn154", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 154, "start_aa": "Asn", "end_pos": 154, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn154", "evidence": [ { "id": "Q9ZVA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "320", "end_pos": "320", "site_lbl": "Asn320", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 320, "start_aa": "Asn", "end_pos": 320, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn320", "evidence": [ { "id": "Q9ZVA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "392", "end_pos": "392", "site_lbl": "Asn392", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 392, "start_aa": "Asn", "end_pos": 392, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn392", "evidence": [ { "id": "Q9ZVA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "103", "end_pos": "103", "site_lbl": "Thr103", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "105", "end_pos": "105", "site_lbl": "Ser105", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "118", "end_pos": "118", "site_lbl": "Ser118", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "119", "end_pos": "119", "site_lbl": "Ser119", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "11", "end_pos": "11", "site_lbl": "Ser11", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Ser123", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Thr127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Ser131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Ser150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Ser156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Ser163", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "168", "end_pos": "168", "site_lbl": "Tyr168", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "169", "end_pos": "169", "site_lbl": "Ser169", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "171", "end_pos": "171", "site_lbl": "Ser171", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "17", "end_pos": "17", "site_lbl": "Ser17", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Ser381", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "45", "end_pos": "45", "site_lbl": "Ser45", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Ser64", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "74", "end_pos": "74", "site_lbl": "Ser74", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVA7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVA7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Ser78", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "85", "end_pos": "85", "site_lbl": "Thr85", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "89", "end_pos": "89", "site_lbl": "Ser89", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "94", "end_pos": "94", "site_lbl": "Ser94", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "97", "end_pos": "97", "site_lbl": "Ser97", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVA7-1", "start_pos": "99", "end_pos": "99", "site_lbl": "Ser99", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVA7" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVD6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 498, "chemical_mass": 56291.0, "gene_names": "CYP705A9;''cytochrome P450;CYP705A9;T20P8.6;T20P8_6;cytochrome P450;family 705;polypeptide 9'';polypeptide 9;subfamily A", "protein_name": "", "disease": [], "molecular_function": [ { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen", "id": "GO:0016709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016709", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "pmid": "" }, { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVD7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 514, "chemical_mass": 58272.0, "gene_names": "CYP705A8;''cytochrome P450;CYP705A8;T20P8.5;T20P8_5;cytochrome P450;family 705;polypeptide 8'';polypeptide 8;subfamily A", "protein_name": "", "disease": [], "molecular_function": [ { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen", "id": "GO:0016709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016709", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "pmid": "" }, { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVD7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVD7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVF2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 151, "chemical_mass": 17602.0, "gene_names": "MLP329;(Zusammen-CA)-enhanced 2;F2I9.15;F2I9_15;MLP-like protein 329;MLP329;ZCE2", "protein_name": "MLP-like protein 329", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" } ], "molecular_function": [ { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVF3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 151, "chemical_mass": 17513.0, "gene_names": "MLP328;(Zusammen-CA)-enhanced 1;F2I9.14;F2I9_14;MLP-like protein 328;MLP328;ZCE1", "protein_name": "MLP-like protein 328", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "response to zinc ion", "id": "GO:0010043", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010043", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "response to phenylpropanoid", "id": "GO:0080184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080184", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" } ], "molecular_function": [ { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF3", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVF3-1", "start_pos": "16", "end_pos": "16", "site_lbl": "Ser16", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVF3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVF3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVF4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 584, "chemical_mass": 66072.0, "gene_names": "PCMP-H37;F2I9.13;F2I9_13", "protein_name": "Pentatricopeptide repeat-containing protein At2g01510, mitochondrial", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF4" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF4" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVF4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVF4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVG8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVG8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 572, "chemical_mass": 63587.0, "gene_names": "PCMP-E54;T2P11.9;T2P11_9", "protein_name": "Pentatricopeptide repeat-containing protein At1g26900, mitochondrial", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVG8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVG8" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVG8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVG8" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA modification", "id": "GO:0009451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009451", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVG8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVG8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVG8-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Ser127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVG8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVG8-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Thr131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVG8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVH5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 486, "chemical_mass": 52534.0, "gene_names": "DTX53;T6A23.29;T6A23_29", "protein_name": "Protein DETOXIFICATION 53", "disease": [], "molecular_function": [ { "name": "xenobiotic transmembrane transporter activity", "id": "GO:0042910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042910", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" }, { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" }, { "name": "antiporter activity", "id": "GO:0015297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015297", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" } ], "biological_process": [ { "name": "xenobiotic detoxification by transmembrane export across the plasma membrane", "id": "GO:1990961", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990961", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVH5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVH5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVL8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 161, "chemical_mass": 18175.0, "gene_names": "AGL85;AGAMOUS-like 85;AGL85;T22H22.17;T22H22_17", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVL8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVL8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVQ6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 272, "chemical_mass": 31294.0, "gene_names": "PP2B10;T16F16.15", "protein_name": "F-box protein PP2-B10", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVQ6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVQ6" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVQ6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVQ6" } ], "pmid": "" } ], "biological_process": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVQ6", "url": "https://www.uniprot.org/uniprotkb/Q9ZVQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVR2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 302, "chemical_mass": 35338.0, "gene_names": "T16F16.8;T16F16_8", "protein_name": "RNA polymerase II C-terminal domain phosphatase-like", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR2" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA polymerase II CTD heptapeptide repeat phosphatase activity", "id": "GO:0008420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008420", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR2", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 310, "chemical_mass": 34930.0, "gene_names": "PP2B2;T16F16.4", "protein_name": "Putative F-box protein PP2-B2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR5" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVR5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVS4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 433, "chemical_mass": 45717.0, "gene_names": "SAP2;F15K9.17;F15K9_17", "protein_name": "", "disease": [], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" } ], "molecular_function": [ { "name": "aspartic-type endopeptidase activity", "id": "GO:0004190", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004190", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVS5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 434, "chemical_mass": 46148.0, "gene_names": "SAP1;F15K9.16;F15K9_16", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" } ], "molecular_function": [ { "name": "aspartic-type endopeptidase activity", "id": "GO:0004190", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004190", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVS8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 499, "chemical_mass": 54662.0, "gene_names": "CBSDUF4;F15K9.13;F15K9_13", "protein_name": "Putative DUF21 domain-containing protein At1g03270", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8" } ], "pmid": "" }, { "name": "vacuolar membrane", "id": "GO:0005774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005774", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8" } ], "pmid": "" } ], "biological_process": [ { "name": "magnesium ion homeostasis", "id": "GO:0010960", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010960", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVS8", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVS8-1", "start_pos": "181", "end_pos": "181", "site_lbl": "Asn181", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 181, "start_aa": "Asn", "end_pos": 181, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn181", "evidence": [ { "id": "Q9ZVS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVS8-1", "start_pos": "357", "end_pos": "357", "site_lbl": "Asn357", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 357, "start_aa": "Asn", "end_pos": 357, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn357", "evidence": [ { "id": "Q9ZVS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVS8-1", "start_pos": "391", "end_pos": "391", "site_lbl": "Asn391", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 391, "start_aa": "Asn", "end_pos": 391, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn391", "evidence": [ { "id": "Q9ZVS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZVS8-1", "start_pos": "484", "end_pos": "484", "site_lbl": "Asn484", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 484, "start_aa": "Asn", "end_pos": 484, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn484", "evidence": [ { "id": "Q9ZVS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVS8#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVX5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 743, "chemical_mass": 83768.0, "gene_names": "F12A24.6", "protein_name": "Pentatricopeptide repeat-containing protein At2g16880", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX5" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVX5", "url": "https://www.uniprot.org/uniprotkb/Q9ZVX5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZVX5-1", "start_pos": "520", "end_pos": "520", "site_lbl": "Thr520", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 520, "start_aa": "Thr", "end_pos": 520, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr520", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZVZ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVZ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 393, "chemical_mass": 44492.0, "gene_names": "T25N20.9;T25N20_9", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVZ4" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVZ4" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVZ4" } ], "pmid": "" } ], "molecular_function": [ { "name": "isomerase activity", "id": "GO:0016853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016853", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZVZ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW00-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW00", "url": "https://www.uniprot.org/uniprotkb/Q9ZW00" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1138, "chemical_mass": 126359.0, "gene_names": "T25N20.3;T25N20_3", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW00", "url": "https://www.uniprot.org/uniprotkb/Q9ZW00" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW00", "url": "https://www.uniprot.org/uniprotkb/Q9ZW00" } ], "pmid": "" }, { "name": "transcription corepressor activity", "id": "GO:0003714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003714", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW00", "url": "https://www.uniprot.org/uniprotkb/Q9ZW00" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW00", "url": "https://www.uniprot.org/uniprotkb/Q9ZW00" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZW00-1", "start_pos": "262", "end_pos": "262", "site_lbl": "Ser262", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZW00", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZW00" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW00-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZW00", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZW00" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW04", "url": "https://www.uniprot.org/uniprotkb/Q9ZW04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 268, "chemical_mass": 28999.0, "gene_names": "F16P2.45;F16P2_45;F16P2", "protein_name": "Tropinone reductase homolog At2g29170", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW04", "url": "https://www.uniprot.org/uniprotkb/Q9ZW04" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW04", "url": "https://www.uniprot.org/uniprotkb/Q9ZW04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW12-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW12", "url": "https://www.uniprot.org/uniprotkb/Q9ZW12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 322, "chemical_mass": 35238.0, "gene_names": "F16P2.36", "protein_name": "Tropinone reductase homolog At2g29260, chloroplastic", "disease": [], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW12", "url": "https://www.uniprot.org/uniprotkb/Q9ZW12" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW12", "url": "https://www.uniprot.org/uniprotkb/Q9ZW12" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW13-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW13", "url": "https://www.uniprot.org/uniprotkb/Q9ZW13" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 262, "chemical_mass": 28406.0, "gene_names": "F16P2.33", "protein_name": "Tropinone reductase homolog At2g29290", "disease": [], "cellular_component": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW13", "url": "https://www.uniprot.org/uniprotkb/Q9ZW13" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW13", "url": "https://www.uniprot.org/uniprotkb/Q9ZW13" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW20-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW20", "url": "https://www.uniprot.org/uniprotkb/Q9ZW20" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 268, "chemical_mass": 28721.0, "gene_names": "F16P2.25;F16P2_25", "protein_name": "Tropinone reductase homolog At2g29370", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW20", "url": "https://www.uniprot.org/uniprotkb/Q9ZW20" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW20", "url": "https://www.uniprot.org/uniprotkb/Q9ZW20" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW20", "url": "https://www.uniprot.org/uniprotkb/Q9ZW20" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW20", "url": "https://www.uniprot.org/uniprotkb/Q9ZW20" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW74-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW74", "url": "https://www.uniprot.org/uniprotkb/Q9ZW74" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 531, "chemical_mass": 57099.0, "gene_names": "PUX11;F14B2.15;MFL8.1", "protein_name": "Plant UBX domain-containing protein 11", "disease": [], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZW74-1", "start_pos": "245", "end_pos": "245", "site_lbl": "Thr245", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 245, "start_aa": "Thr", "end_pos": 245, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr245", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW74-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Ser404", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZW74", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZW74" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW74-1", "start_pos": "406", "end_pos": "406", "site_lbl": "Ser406", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZW74", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZW74" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW75-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW75", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 611, "chemical_mass": 70236.0, "gene_names": "F14B2.14", "protein_name": "Probable methyltransferase PMT19", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW75", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW75", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75" } ], "pmid": "" } ], "molecular_function": [ { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW75", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW75", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Asn289", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 289, "start_aa": "Asn", "end_pos": 289, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn289", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "408", "end_pos": "408", "site_lbl": "Asn408", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 408, "start_aa": "Asn", "end_pos": 408, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn408", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "411", "end_pos": "411", "site_lbl": "Asn411", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 411, "start_aa": "Asn", "end_pos": 411, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn411", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "587", "end_pos": "587", "site_lbl": "Asn587", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 587, "start_aa": "Asn", "end_pos": 587, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn587", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Asn68", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 68, "start_aa": "Asn", "end_pos": 68, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn68", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "97", "end_pos": "97", "site_lbl": "Asn97", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 97, "start_aa": "Asn", "end_pos": 97, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn97", "evidence": [ { "id": "Q9ZW75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZW75#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZW75-1", "start_pos": "581", "end_pos": "581", "site_lbl": "Thr581", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZW75", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZW75" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW88-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW88", "url": "https://www.uniprot.org/uniprotkb/Q9ZW88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 419, "chemical_mass": 47732.0, "gene_names": "F5A8.10", "protein_name": "F-box/LRR-repeat protein At1g67190", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW88", "url": "https://www.uniprot.org/uniprotkb/Q9ZW88" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW88", "url": "https://www.uniprot.org/uniprotkb/Q9ZW88" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZW96-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZW96", "url": "https://www.uniprot.org/uniprotkb/Q9ZW96" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 233, "chemical_mass": 25700.0, "gene_names": "LBD40;ASL37;F1O19.17;F5A8.2;LBD40;LOB domain-containing protein 40", "protein_name": "LOB domain-containing protein 40", "disease": [], "biological_process": [ { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW96", "url": "https://www.uniprot.org/uniprotkb/Q9ZW96" } ], "pmid": "" }, { "name": "response to gibberellin", "id": "GO:0009739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW96", "url": "https://www.uniprot.org/uniprotkb/Q9ZW96" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA-binding transcription repressor activity", "id": "GO:0001217", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001217", "evidence": [ { "database": "UniProtKB", "id": "Q9ZW96", "url": "https://www.uniprot.org/uniprotkb/Q9ZW96" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZWB8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZWB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZWB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 177, "chemical_mass": 19411.0, "gene_names": "RIC8;F21M11.8", "protein_name": "CRIB domain-containing protein RIC8", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZWB8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZWC4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 271, "chemical_mass": 31096.0, "gene_names": "F21M11.2;F21M11_2", "protein_name": "", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" } ], "molecular_function": [ { "name": "acid phosphatase activity", "id": "GO:0003993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003993", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" }, { "name": "nutrient reservoir activity", "id": "GO:0045735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045735", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWC4", "url": "https://www.uniprot.org/uniprotkb/Q9ZWC4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZWD1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZWD1", "url": "https://www.uniprot.org/uniprotkb/Q9ZWD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 187, "chemical_mass": 20782.0, "gene_names": "PRA1G1;F20N2.7;PRA1.G1;prenylated RAB acceptor 1.G1", "protein_name": "PRA1 family protein G1", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWD1", "url": "https://www.uniprot.org/uniprotkb/Q9ZWD1" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWD1", "url": "https://www.uniprot.org/uniprotkb/Q9ZWD1" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWD1", "url": "https://www.uniprot.org/uniprotkb/Q9ZWD1" } ], "pmid": "" } ], "biological_process": [ { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWD1", "url": "https://www.uniprot.org/uniprotkb/Q9ZWD1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZWI7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 212, "chemical_mass": 24404.0, "gene_names": "ATRER1C1;RER1C;ATRER1C1;ATRER1C;T20D16.6;T20D16_6", "protein_name": "Protein RER1C", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" } ], "biological_process": [ { "name": "retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum", "id": "GO:0006890", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006890", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" }, { "name": "protein retention in ER lumen", "id": "GO:0006621", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006621", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZWI7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZWI7-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Ser211", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZWI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZWI7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZWJ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 481, "chemical_mass": 54364.0, "gene_names": "UGT85A2;AtUGT85A2;T16E15.3;UDP-glucosyl transferase 85A2;UGT85A2", "protein_name": "UDP-glycosyltransferase 85A2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" } ], "molecular_function": [ { "name": "glucuronosyltransferase activity", "id": "GO:0015020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" }, { "name": "quercetin 3-O-glucosyltransferase activity", "id": "GO:0080043", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080043", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" }, { "name": "quercetin 7-O-glucosyltransferase activity", "id": "GO:0080044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080044", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" }, { "name": "UDP-glucosyltransferase activity", "id": "GO:0035251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035251", "evidence": [ { "database": "UniProtKB", "id": "Q9ZWJ3", "url": "https://www.uniprot.org/uniprotkb/Q9ZWJ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZWJ3-1", "start_pos": "264", "end_pos": "264", "site_lbl": "Ser264", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZWJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZWJ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A0A7EPL0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 847, "chemical_mass": 93475.0, "gene_names": "PIAL1;EMB3001;F7G19.21;F7G19_21;PIAL1;PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 1;embryo defective 3001", "protein_name": "E4 SUMO-protein ligase PIAL1", "disease": [], "molecular_function": [ { "name": "SUMO ligase activity", "id": "GO:0061665", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061665", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" }, { "name": "SUMO transferase activity", "id": "GO:0019789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019789", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" } ], "biological_process": [ { "name": "protein sumoylation", "id": "GO:0016925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016925", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" }, { "name": "regulation of gene silencing by regulatory ncRNA", "id": "GO:0060966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060966", "evidence": [ { "database": "UniProtKB", "id": "A0A0A7EPL0", "url": "https://www.uniprot.org/uniprotkb/A0A0A7EPL0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A0A7EPL0-1", "start_pos": "488", "end_pos": "488", "site_lbl": "Thr488", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 488, "start_aa": "Thr", "end_pos": 488, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr488", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFV2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 892, "chemical_mass": 99083.0, "gene_names": "MQL5.29;MQL5.29;MQL5_29", "protein_name": "E3 ubiquitin ligase PQT3-like", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Ser281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "285", "end_pos": "285", "site_lbl": "Ser285", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "363", "end_pos": "363", "site_lbl": "Ser363", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "364", "end_pos": "364", "site_lbl": "Thr364", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Ser369", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "388", "end_pos": "388", "site_lbl": "Ser388", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "390", "end_pos": "390", "site_lbl": "Thr390", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "391", "end_pos": "391", "site_lbl": "Thr391", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "392", "end_pos": "392", "site_lbl": "Ser392", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "395", "end_pos": "395", "site_lbl": "Ser395", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Ser404", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "411", "end_pos": "411", "site_lbl": "Thr411", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Ser428", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "687", "end_pos": "687", "site_lbl": "Ser687", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "698", "end_pos": "698", "site_lbl": "Ser698", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "765", "end_pos": "765", "site_lbl": "Ser765", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "769", "end_pos": "769", "site_lbl": "Ser769", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "847", "end_pos": "847", "site_lbl": "Tyr847", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "849", "end_pos": "849", "site_lbl": "Ser849", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "850", "end_pos": "850", "site_lbl": "Ser850", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "863", "end_pos": "863", "site_lbl": "Tyr863", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "866", "end_pos": "866", "site_lbl": "Ser866", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFV2", "url": "https://www.uniprot.org/uniprotkb/B9DFV2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFV2-1", "start_pos": "872", "end_pos": "872", "site_lbl": "Ser872", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFV2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFV2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGR6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 913, "chemical_mass": 101593.0, "gene_names": "RHS16;F19B15.210;F19B15_210;RHS16;root hair specific 16", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g29180", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Asn143", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 143, "start_aa": "Asn", "end_pos": 143, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn143", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "184", "end_pos": "184", "site_lbl": "Asn184", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 184, "start_aa": "Asn", "end_pos": 184, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn184", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Asn195", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 195, "start_aa": "Asn", "end_pos": 195, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn195", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Asn210", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 210, "start_aa": "Asn", "end_pos": 210, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn210", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "233", "end_pos": "233", "site_lbl": "Asn233", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 233, "start_aa": "Asn", "end_pos": 233, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn233", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "296", "end_pos": "296", "site_lbl": "Asn296", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "408", "end_pos": "408", "site_lbl": "Asn408", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 408, "start_aa": "Asn", "end_pos": 408, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn408", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "418", "end_pos": "418", "site_lbl": "Asn418", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 418, "start_aa": "Asn", "end_pos": 418, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn418", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Asn434", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 434, "start_aa": "Asn", "end_pos": 434, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn434", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Asn471", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 471, "start_aa": "Asn", "end_pos": 471, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn471", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Asn64", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 64, "start_aa": "Asn", "end_pos": 64, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn64", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "558", "end_pos": "558", "site_lbl": "Thr558", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "653", "end_pos": "653", "site_lbl": "Tyr653", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "739", "end_pos": "739", "site_lbl": "Thr739", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "744", "end_pos": "744", "site_lbl": "Thr744", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_canonical_ac": "C0LGR6-1", "start_pos": "752", "end_pos": "752", "site_lbl": "Tyr752", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR6", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JRB0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 363, "chemical_mass": 41679.0, "gene_names": "HHO5;UIF1;C7A10.180;UIF1", "protein_name": "Transcription factor HHO5", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "negative regulation of gene expression", "id": "GO:0010629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010629", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "floral organ formation", "id": "GO:0048449", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048449", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" }, { "name": "specification of plant organ identity", "id": "GO:0090701", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090701", "evidence": [ { "database": "UniProtKB", "id": "F4JRB0", "url": "https://www.uniprot.org/uniprotkb/F4JRB0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A178VEK7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 300, "chemical_mass": 34065.0, "gene_names": "DUO1;DUO POLLEN 1;DUO1;MYB125;T8B10.120", "protein_name": "Transcription factor DUO1", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "generative cell nucleus", "id": "GO:0048555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048555", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "cell cycle G2/M phase transition", "id": "GO:0044839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044839", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "generative cell mitosis", "id": "GO:0055047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055047", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" }, { "name": "pollen sperm cell differentiation", "id": "GO:0048235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048235", "evidence": [ { "database": "UniProtKB", "id": "A0A178VEK7", "url": "https://www.uniprot.org/uniprotkb/A0A178VEK7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J8C6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1050, "chemical_mass": 118924.0, "gene_names": "ATVIP1;VIP1;Arabidopsis homolog of yeast Vip1 1;AtVIP1;QVE7;T22N4.6;T22N4_6;T4P13.1;T4P13_1;VIH2", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1", "disease": [], "biological_process": [ { "name": "inositol metabolic process", "id": "GO:0006020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006020", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "inositol phosphate biosynthetic process", "id": "GO:0032958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032958", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "positive regulation of antifungal innate immune response", "id": "GO:1905036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905036", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "jasmonic acid and ethylene-dependent systemic resistance", "id": "GO:0009861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009861", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "positive regulation of defense response to insect", "id": "GO:1900367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900367", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "positive regulation of vitamin E biosynthetic process", "id": "GO:1904966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904966", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" } ], "molecular_function": [ { "name": "inositol hexakisphosphate kinase activity", "id": "GO:0000828", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000828", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "diphosphoinositol pentakisphosphate kinase activity", "id": "GO:0000829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000829", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "inositol hexakisphosphate 1-kinase activity", "id": "GO:0052723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052723", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "5-diphosphoinositol pentakisphosphate 1-kinase activity", "id": "GO:0033857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033857", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "1027", "end_pos": "1027", "site_lbl": "Ser1027", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "189", "end_pos": "189", "site_lbl": "Ser189", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "352", "end_pos": "352", "site_lbl": "Ser352", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "429", "end_pos": "429", "site_lbl": "Thr429", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "435", "end_pos": "435", "site_lbl": "Ser435", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Ser437", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "734", "end_pos": "734", "site_lbl": "Ser734", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "743", "end_pos": "743", "site_lbl": "Ser743", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "821", "end_pos": "821", "site_lbl": "Ser821", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "828", "end_pos": "828", "site_lbl": "Ser828", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "836", "end_pos": "836", "site_lbl": "Ser836", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8C6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8C6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "219", "end_pos": "219", "site_lbl": "Lys219", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" }, { "database": "PubMed", "id": "25901085", "url": "https://glygen.org/publication/PubMed/25901085" } ] } ] }, { "uniprot_canonical_ac": "F4J8C6-1", "start_pos": "292", "end_pos": "292", "site_lbl": "Asp292", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "F4J8C6", "url": "https://www.uniprot.org/uniprotkb/F4J8C6" }, { "database": "PubMed", "id": "25901085", "url": "https://glygen.org/publication/PubMed/25901085" }, { "database": "PubMed", "id": "25231822", "url": "https://glygen.org/publication/PubMed/25231822" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IHS2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 3574, "chemical_mass": 389864.0, "gene_names": "SYD;CHR3;CHROMATIN REMODELING COMPLEX SUBUNIT R 3;CHROMATIN REMODELING COMPLEX SUBUNIT R;SPLAYED;SYD;T3B23", "protein_name": "Chromatin structure-remodeling complex protein SYD", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "nucleosome array spacer activity", "id": "GO:0140750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140750", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "ethylene-activated signaling pathway", "id": "GO:0009873", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009873", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "regulation of ethylene-activated signaling pathway", "id": "GO:0010104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010104", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "organ boundary specification between lateral organs and the meristem", "id": "GO:0010199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010199", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "regulation of defense response to fungus", "id": "GO:1900150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900150", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "regulation of jasmonic acid mediated signaling pathway", "id": "GO:2000022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000022", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "anatomical structure morphogenesis", "id": "GO:0009653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009653", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" }, { "name": "reproductive structure development", "id": "GO:0048608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048608", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1528", "end_pos": "1528", "site_lbl": "Thr1528", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1528, "start_aa": "Thr", "end_pos": 1528, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1528", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Ser378", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 378, "start_aa": "Ser", "end_pos": 378, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser378", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "397", "end_pos": "397", "site_lbl": "Ser397", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 397, "start_aa": "Ser", "end_pos": 397, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser397", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "398", "end_pos": "398", "site_lbl": "Ser398", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 398, "start_aa": "Ser", "end_pos": 398, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser398", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Thr402", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 402, "start_aa": "Thr", "end_pos": 402, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr402", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "407", "end_pos": "407", "site_lbl": "Ser407", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 407, "start_aa": "Ser", "end_pos": 407, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser407", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "409", "end_pos": "409", "site_lbl": "Ser409", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 409, "start_aa": "Ser", "end_pos": 409, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser409", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IHS2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1347", "end_pos": "1347", "site_lbl": "Ser1347", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Thr137", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1385", "end_pos": "1385", "site_lbl": "Ser1385", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1388", "end_pos": "1388", "site_lbl": "Ser1388", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "149", "end_pos": "149", "site_lbl": "Ser149", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "154", "end_pos": "154", "site_lbl": "Ser154", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Ser156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1586", "end_pos": "1586", "site_lbl": "Ser1586", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1607", "end_pos": "1607", "site_lbl": "Ser1607", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1817", "end_pos": "1817", "site_lbl": "Ser1817", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1819", "end_pos": "1819", "site_lbl": "Thr1819", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1881", "end_pos": "1881", "site_lbl": "Ser1881", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1906", "end_pos": "1906", "site_lbl": "Ser1906", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Ser193", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2008", "end_pos": "2008", "site_lbl": "Thr2008", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2023", "end_pos": "2023", "site_lbl": "Thr2023", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2024", "end_pos": "2024", "site_lbl": "Thr2024", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2027", "end_pos": "2027", "site_lbl": "Ser2027", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2031", "end_pos": "2031", "site_lbl": "Thr2031", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2038", "end_pos": "2038", "site_lbl": "Thr2038", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2070", "end_pos": "2070", "site_lbl": "Ser2070", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2102", "end_pos": "2102", "site_lbl": "Thr2102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2104", "end_pos": "2104", "site_lbl": "Ser2104", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2527", "end_pos": "2527", "site_lbl": "Ser2527", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2711", "end_pos": "2711", "site_lbl": "Thr2711", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2716", "end_pos": "2716", "site_lbl": "Thr2716", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2717", "end_pos": "2717", "site_lbl": "Ser2717", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2731", "end_pos": "2731", "site_lbl": "Ser2731", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "2733", "end_pos": "2733", "site_lbl": "Ser2733", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "3125", "end_pos": "3125", "site_lbl": "Ser3125", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "3126", "end_pos": "3126", "site_lbl": "Ser3126", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "3127", "end_pos": "3127", "site_lbl": "Ser3127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "3129", "end_pos": "3129", "site_lbl": "Thr3129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "3482", "end_pos": "3482", "site_lbl": "Ser3482", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Thr434", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "438", "end_pos": "438", "site_lbl": "Ser438", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "449", "end_pos": "449", "site_lbl": "Ser449", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Ser450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Ser460", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IHS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IHS2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IHS2-1", "start_pos": "1153", "end_pos": "1153", "site_lbl": "Gly1153", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In syd-1; precocious transition from inflorescence to flower formation, abnormal flowers exhibiting variable petals and stamens number and position as well as some mosaic organs (stamenoid petals).", "evidence": [ { "database": "UniProtKB", "id": "F4IHS2", "url": "https://www.uniprot.org/uniprotkb/F4IHS2" }, { "database": "PubMed", "id": "11818058", "url": "https://glygen.org/publication/PubMed/11818058" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IGZ2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 910, "chemical_mass": 101611.0, "gene_names": "SMXL8;SMAX1-like 8;SMXL8;T07M07.2;T7M7.2;T7M7_2", "protein_name": "Protein SMAX1-LIKE 8", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" }, { "name": "protein folding chaperone", "id": "GO:0044183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044183", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" }, { "name": "response to strigolactone", "id": "GO:1902347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902347", "evidence": [ { "database": "UniProtKB", "id": "F4IGZ2", "url": "https://www.uniprot.org/uniprotkb/F4IGZ2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IGZ2-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Ser498", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IGZ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IGZ2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IGZ2-1", "start_pos": "499", "end_pos": "499", "site_lbl": "Ser499", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IGZ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IGZ2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IGZ2-1", "start_pos": "663", "end_pos": "663", "site_lbl": "Ser663", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IGZ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IGZ2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I443-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 714, "chemical_mass": 79690.0, "gene_names": "BARD1;ATBARD1;F21M11.4;F21M11_4;ROW1", "protein_name": "BRCA1-associated RING domain protein 1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "BRCA1-A complex", "id": "GO:0070531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070531", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "BRCA1-BARD1 complex", "id": "GO:0031436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031436", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "double-strand break repair via homologous recombination", "id": "GO:0000724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000724", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "protein-DNA complex assembly", "id": "GO:0065004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0065004", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "regulation of meristem structural organization", "id": "GO:0009934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009934", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "maintenance of shoot apical meristem identity", "id": "GO:0010492", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010492", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" }, { "name": "leaf development", "id": "GO:0048366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048366", "evidence": [ { "database": "UniProtKB", "id": "F4I443", "url": "https://www.uniprot.org/uniprotkb/F4I443" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HU58-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 420, "chemical_mass": 46493.0, "gene_names": "TAD1;AtTAD1;T1N6.17;T1N6_17;TAD1;ortholog of yeast Tad1", "protein_name": "tRNA-specific adenosine deaminase TAD1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "tRNA modification", "id": "GO:0006400", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006400", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "adenosine to inosine editing", "id": "GO:0006382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006382", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" } ], "molecular_function": [ { "name": "tRNA-specific adenosine deaminase activity", "id": "GO:0008251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008251", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "double-stranded RNA adenosine deaminase activity", "id": "GO:0003726", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003726", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "tRNA-specific adenosine-37 deaminase activity", "id": "GO:0043829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043829", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" }, { "name": "adenosine deaminase activity", "id": "GO:0004000", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004000", "evidence": [ { "database": "UniProtKB", "id": "F4HU58", "url": "https://www.uniprot.org/uniprotkb/F4HU58" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IAT2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1823, "chemical_mass": 207075.0, "gene_names": "THO2;AtTHO2;EMB2793;EMBRYO DEFECTIVE 2793;F5A9.21;F5A9.22;F5A9_21;THO2", "protein_name": "THO complex subunit 2", "disease": [], "cellular_component": [ { "name": "THO complex", "id": "GO:0000347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000347", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "THO complex part of transcription export complex", "id": "GO:0000445", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000445", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "mRNA export from nucleus", "id": "GO:0006406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006406", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "miRNA processing", "id": "GO:0035196", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035196", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" }, { "name": "miRNA transport", "id": "GO:1990428", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990428", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "816", "end_pos": "816", "site_lbl": "Thr816", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 816, "start_aa": "Thr", "end_pos": 816, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr816", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1233", "end_pos": "1233", "site_lbl": "Thr1233", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1290", "end_pos": "1290", "site_lbl": "Ser1290", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1308", "end_pos": "1308", "site_lbl": "Ser1308", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1313", "end_pos": "1313", "site_lbl": "Ser1313", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1322", "end_pos": "1322", "site_lbl": "Thr1322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1326", "end_pos": "1326", "site_lbl": "Ser1326", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1374", "end_pos": "1374", "site_lbl": "Thr1374", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1375", "end_pos": "1375", "site_lbl": "Ser1375", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1376", "end_pos": "1376", "site_lbl": "Thr1376", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1389", "end_pos": "1389", "site_lbl": "Ser1389", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1392", "end_pos": "1392", "site_lbl": "Thr1392", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1409", "end_pos": "1409", "site_lbl": "Ser1409", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1431", "end_pos": "1431", "site_lbl": "Ser1431", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1442", "end_pos": "1442", "site_lbl": "Ser1442", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1443", "end_pos": "1443", "site_lbl": "Ser1443", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1484", "end_pos": "1484", "site_lbl": "Ser1484", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1551", "end_pos": "1551", "site_lbl": "Ser1551", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1585", "end_pos": "1585", "site_lbl": "Ser1585", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1635", "end_pos": "1635", "site_lbl": "Ser1635", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1646", "end_pos": "1646", "site_lbl": "Ser1646", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1651", "end_pos": "1651", "site_lbl": "Ser1651", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1696", "end_pos": "1696", "site_lbl": "Ser1696", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IAT2", "url": "https://www.uniprot.org/uniprotkb/F4IAT2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1719", "end_pos": "1719", "site_lbl": "Ser1719", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1725", "end_pos": "1725", "site_lbl": "Tyr1725", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "1743", "end_pos": "1743", "site_lbl": "Tyr1743", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "314", "end_pos": "314", "site_lbl": "Thr314", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" } ] } ] }, { "uniprot_canonical_ac": "F4IAT2-1", "start_pos": "975", "end_pos": "975", "site_lbl": "Ser975", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAT2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAT2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HU55-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 483, "chemical_mass": 54039.0, "gene_names": "BSK4;BSK4;T1N6.15;T1N6_15;brassinosteroid-signaling kinase 4", "protein_name": "Serine/threonine-protein kinase BSK4", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" } ], "biological_process": [ { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "F4HU55", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HU55-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Ser208", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HU55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HU55" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] } ] }, { "uniprot_canonical_ac": "F4HU55-1", "start_pos": "209", "end_pos": "209", "site_lbl": "Tyr209", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HU55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HU55" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HU55-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Ser210", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HU55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HU55" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "17586839", "url": "https://glygen.org/publication/PubMed/17586839" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HU55-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Thr211", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HU55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HU55" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A178WF56-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 71, "chemical_mass": 7812.0, "gene_names": "ATHCYSTM3;CYSTM3;T6H22.17;T6H22_17", "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" } ], "biological_process": [ { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "sodium ion homeostasis", "id": "GO:0055078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055078", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "regulation of reactive oxygen species biosynthetic process", "id": "GO:1903426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903426", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "regulation of response to salt stress", "id": "GO:1901000", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901000", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" }, { "name": "negative regulation of response to salt stress", "id": "GO:1901001", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901001", "evidence": [ { "database": "UniProtKB", "id": "A0A178WF56", "url": "https://www.uniprot.org/uniprotkb/A0A178WF56" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A178WF56-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Ser35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A178WF56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A178WF56" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HW04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2161, "chemical_mass": 248897.0, "gene_names": "POL2A;TIL1;ABA OVERLY SENSITIVE 4;ABO4;EARLY IN SHORT DAYS 7;EMB142;EMB2284;EMB529;EMBRYO DEFECTIVE 142;EMBRYO DEFECTIVE 2284;EMBRYO DEFECTIVE 529;ESD7;POL2A;T23G18.21;T23G18_21;TIL1;TILTED 1", "protein_name": "DNA polymerase epsilon catalytic subunit A", "disease": [], "molecular_function": [ { "name": "DNA-directed DNA polymerase activity", "id": "GO:0003887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003887", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "single-stranded DNA 3'-5' DNA exonuclease activity", "id": "GO:0008310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008310", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "nucleotide binding", "id": "GO:0000166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000166", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" } ], "cellular_component": [ { "name": "epsilon DNA polymerase complex", "id": "GO:0008622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008622", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" } ], "biological_process": [ { "name": "leading strand elongation", "id": "GO:0006272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006272", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "nucleotide-excision repair, DNA gap filling", "id": "GO:0006297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006297", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "base-excision repair, gap-filling", "id": "GO:0006287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006287", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "DNA replication proofreading", "id": "GO:0045004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045004", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "negative regulation of long-day photoperiodism, flowering", "id": "GO:0048579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048579", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "embryonic root morphogenesis", "id": "GO:0010086", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010086", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HW04-1", "start_pos": "1542", "end_pos": "1542", "site_lbl": "Thr1542", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1542, "start_aa": "Thr", "end_pos": 1542, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1542", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HW04-1", "start_pos": "1327", "end_pos": "1327", "site_lbl": "Ser1327", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HW04", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HW04" } ] } ] }, { "uniprot_canonical_ac": "F4HW04-1", "start_pos": "469", "end_pos": "469", "site_lbl": "Gly469", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In til1-4; lengthening of the cell cycle during embryo development and alters cell type patterning of the hypophyseal lineage in the root, leading to a displacement of the root pole from its normal position on top of the suspensor. Slow growing roots, slightly delayed flowering, altered floral phyllotaxis, a reduced number of ovules, abnormally developing ovules, and reduced fertility.", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" }, { "database": "PubMed", "id": "16278345", "url": "https://glygen.org/publication/PubMed/16278345" } ] } ] }, { "uniprot_canonical_ac": "F4HW04-1", "start_pos": "992", "end_pos": "992", "site_lbl": "Gly992", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In esd7-1; early flowering independently of photoperiod, shortened inflorescence internodes and altered flowers, leaves and roots development. Enrichement in acetylated H3 and trimethylated H3 'Lys-4' (H3K4me3) activating epigenetic marks of the chromatin of FT and AG loci.", "evidence": [ { "database": "UniProtKB", "id": "F4HW04", "url": "https://www.uniprot.org/uniprotkb/F4HW04" }, { "database": "PubMed", "id": "19947980", "url": "https://glygen.org/publication/PubMed/19947980" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HWY6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1529, "chemical_mass": 173610.0, "gene_names": "XI-E;XIE;ATXIE;MYOSIN XI E;T22H22.1;T22H22_1;XIE", "protein_name": "Myosin-11", "disease": [], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "cytoskeletal motor activity", "id": "GO:0003774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003774", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "microfilament motor activity", "id": "GO:0000146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000146", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "myosin complex", "id": "GO:0016459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016459", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" } ], "biological_process": [ { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "actin filament-based movement", "id": "GO:0030048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030048", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4HWY6", "url": "https://www.uniprot.org/uniprotkb/F4HWY6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HWY6-1", "start_pos": "1102", "end_pos": "1102", "site_lbl": "Ser1102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HWY6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HWY6" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J117-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 591, "chemical_mass": 65741.0, "gene_names": "LSF1;F4P13.6;F4P13_6;LSF1;PTPKIS2;like SEX4 1", "protein_name": "Phosphoglucan phosphatase LSF1, chloroplastic", "disease": [], "biological_process": [ { "name": "starch catabolic process", "id": "GO:0005983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005983", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" }, { "name": "glucan metabolic process", "id": "GO:0044042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044042", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphoprotein phosphatase activity", "id": "GO:0004721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004721", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" }, { "name": "carbohydrate phosphatase activity", "id": "GO:0019203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019203", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" }, { "name": "chloroplast starch grain", "id": "GO:0009569", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009569", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" }, { "name": "starch grain", "id": "GO:0043036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043036", "evidence": [ { "database": "UniProtKB", "id": "F4J117", "url": "https://www.uniprot.org/uniprotkb/F4J117" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J117-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Thr235", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J117", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J117" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J117-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Tyr41", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J117", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J117" } ] } ] }, { "uniprot_canonical_ac": "F4J117-1", "start_pos": "44", "end_pos": "44", "site_lbl": "Ser44", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J117", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J117" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IYH6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 994, "chemical_mass": 108865.0, "gene_names": "AIPP2;F13E7.16;F13E7_16;PHD3", "protein_name": "ASI1-immunoprecipitated protein 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "negative regulation of transcription elongation by RNA polymerase II", "id": "GO:0034244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034244", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "regulation of photoperiodism, flowering", "id": "GO:2000028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000028", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "histone H3K27me3 reader activity", "id": "GO:0061628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061628", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" }, { "name": "histone reader activity", "id": "GO:0140566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140566", "evidence": [ { "database": "UniProtKB", "id": "F4IYH6", "url": "https://www.uniprot.org/uniprotkb/F4IYH6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "313", "end_pos": "313", "site_lbl": "Ser313", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "346", "end_pos": "346", "site_lbl": "Ser346", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "351", "end_pos": "351", "site_lbl": "Ser351", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "367", "end_pos": "367", "site_lbl": "Ser367", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "377", "end_pos": "377", "site_lbl": "Ser377", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "382", "end_pos": "382", "site_lbl": "Ser382", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IYH6-1", "start_pos": "469", "end_pos": "469", "site_lbl": "Ser469", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MPR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 876, "chemical_mass": 99864.0, "gene_names": "FTSHI2;MLP-300B;ATMLP-300B;EMB2083;MEE36;MYA6.12;T2O4.19;embryo defective 2083", "protein_name": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic", "disease": [], "molecular_function": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "ATP-dependent peptidase activity", "id": "GO:0004176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004176", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "chloroplast protein-transporting ATPase activity", "id": "GO:0016464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016464", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "protein import into chloroplast stroma", "id": "GO:0045037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045037", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "chloroplast membrane", "id": "GO:0031969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031969", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" }, { "name": "Ycf2/FtsHi complex", "id": "GO:0062091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062091", "evidence": [ { "database": "UniProtKB", "id": "A8MPR5", "url": "https://www.uniprot.org/uniprotkb/A8MPR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JEP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 807, "chemical_mass": 91123.0, "gene_names": "MSH5;ATMSH5;MQC12.27;MSH5;MUTS-HOMOLOGUE 5;MUTS-homologue 5", "protein_name": "DNA mismatch repair protein MSH5", "disease": [], "biological_process": [ { "name": "homologous chromosome segregation", "id": "GO:0045143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045143", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "reciprocal meiotic recombination", "id": "GO:0007131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007131", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "chiasma assembly", "id": "GO:0051026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051026", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "meiotic mismatch repair involved in reciprocal meiotic recombination", "id": "GO:0010777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010777", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "mismatch repair", "id": "GO:0006298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006298", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" } ], "cellular_component": [ { "name": "condensed nuclear chromosome", "id": "GO:0000794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000794", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "germ cell nucleus", "id": "GO:0043073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043073", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" } ], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "double-stranded DNA binding", "id": "GO:0003690", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003690", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "mismatched DNA binding", "id": "GO:0030983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030983", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" }, { "name": "ATP-dependent DNA damage sensor activity", "id": "GO:0140664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140664", "evidence": [ { "database": "UniProtKB", "id": "F4JEP5", "url": "https://www.uniprot.org/uniprotkb/F4JEP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1410, "chemical_mass": 157118.0, "gene_names": "CAP-D2;F24I3.140", "protein_name": "Condensin-1 complex subunit CAP-D2", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "mitotic chromosome condensation", "id": "GO:0007076", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007076", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "meiotic chromosome condensation", "id": "GO:0010032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010032", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "condensin complex", "id": "GO:0000796", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000796", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "condensed chromosome, centromeric region", "id": "GO:0000779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000779", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" } ], "molecular_function": [ { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LM04", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM04" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LM04-1", "start_pos": "786", "end_pos": "786", "site_lbl": "Thr786", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 786, "start_aa": "Thr", "end_pos": 786, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr786", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "start_pos": "480", "end_pos": "480", "site_lbl": "Thr480", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LM04", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LM04" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "start_pos": "481", "end_pos": "481", "site_lbl": "Ser481", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LM04", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LM04" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "start_pos": "485", "end_pos": "485", "site_lbl": "Ser485", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LM04", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LM04" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LM04-1", "start_pos": "507", "end_pos": "507", "site_lbl": "Ser507", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1I9LM04", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1I9LM04" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFG5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 408, "chemical_mass": 45658.0, "gene_names": "CARK5;F25L23.210;MAZ;PTI13", "protein_name": "Protein CYTOSOLIC ABA RECEPTOR KINASE 5", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "protein tyrosine kinase activity", "id": "GO:0004713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004713", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "kinase binding", "id": "GO:0019900", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019900", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "non-membrane spanning protein tyrosine kinase activity", "id": "GO:0004715", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004715", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "cellular response to peptide", "id": "GO:1901653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901653", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "regulation of stomatal complex patterning", "id": "GO:2000037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000037", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "stomatal complex patterning", "id": "GO:0010375", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010375", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" }, { "name": "regulation of stomatal complex development", "id": "GO:2000038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000038", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Ser102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "110", "end_pos": "110", "site_lbl": "Thr110", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ], "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "D", "comment": "Phosphomimic but inactive; when associated with D-115; D-123 and D-332.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "39673241", "url": "https://glygen.org/publication/PubMed/39673241" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Ser115", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimic but inactive; when associated with D-110; D-123 and D-332.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "39673241", "url": "https://glygen.org/publication/PubMed/39673241" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Ser123", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "iPTMnet", "id": "B9DFG5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimic but inactive; when associated with D-110; D-115 and D-332.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "39673241", "url": "https://glygen.org/publication/PubMed/39673241" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Tyr129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "187", "end_pos": "187", "site_lbl": "Tyr187", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "19", "end_pos": "19", "site_lbl": "Ser19", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFG5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG5" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "248", "end_pos": "248", "site_lbl": "Ser248", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "249", "end_pos": "249", "site_lbl": "Ser249", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "267", "end_pos": "267", "site_lbl": "Ser267", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "279", "end_pos": "279", "site_lbl": "Ser279", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "280", "end_pos": "280", "site_lbl": "Thr280", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "285", "end_pos": "285", "site_lbl": "Thr285", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Tyr293", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "332", "end_pos": "332", "site_lbl": "Ser332", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "D", "comment": "Phosphomimic but inactive; when associated with D-110; D-115 and D-123.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "39673241", "url": "https://glygen.org/publication/PubMed/39673241" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Ser67", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFG5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Lys141", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "N", "comment": "Impaired kinase activity, but conserved phosphorylation by CPK28, full sensitivity to CLV3 peptide and normal plant growth.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "39673241", "url": "https://glygen.org/publication/PubMed/39673241" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "48", "end_pos": "48", "site_lbl": "Cys48", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "W", "comment": "Abnormal cytoplasmic localization at the expense of plasma membrane positioning; when associated with W-49. Loss of plasma membrane positioning leading to exclusive cytoplasmic localization, and impaired CLE40 sensitivity leading to an increased columella stem cell (CSC) number; when associated with W-49 and W-51.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "33909893", "url": "https://glygen.org/publication/PubMed/33909893" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "49", "end_pos": "49", "site_lbl": "Cys49", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "W", "comment": "Abnormal cytoplasmic localization at the expense of plasma membrane positioning; when associated with W-48. Loss of plasma membrane positioning leading to exclusive cytoplasmic localization, and impaired CLE40 sensitivity leading to an increased columella stem cell (CSC) number; when associated with W-48 and W-51.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "33909893", "url": "https://glygen.org/publication/PubMed/33909893" } ] } ] }, { "uniprot_canonical_ac": "B9DFG5-1", "start_pos": "51", "end_pos": "51", "site_lbl": "Cys51", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "W", "comment": "Loss of plasma membrane positioning leading to exclusive cytoplasmic localization, and impaired CLE40 sensitivity leading to an increased columella stem cell (CSC) number; when associated with W-48 and W-49.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG5", "url": "https://www.uniprot.org/uniprotkb/B9DFG5" }, { "database": "PubMed", "id": "33909893", "url": "https://glygen.org/publication/PubMed/33909893" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JCC1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 992, "chemical_mass": 113569.0, "gene_names": "PRP40B;ATPRP40B;MED35B;MED35_2;MMB12.15;PRP40B;pre-mRNA-processing protein 40B", "protein_name": "Pre-mRNA-processing protein 40B", "disease": [], "cellular_component": [ { "name": "U1 snRNP", "id": "GO:0005685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005685", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" }, { "name": "U2-type prespliceosome", "id": "GO:0071004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071004", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" }, { "name": "RNA polymerase binding", "id": "GO:0070063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070063", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" }, { "name": "mRNA cis splicing, via spliceosome", "id": "GO:0045292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045292", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "343", "end_pos": "343", "site_lbl": "Ser343", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCC1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCC1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "348", "end_pos": "348", "site_lbl": "Ser348", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCC1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCC1" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "349", "end_pos": "349", "site_lbl": "Ser349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCC1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCC1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "209", "end_pos": "209", "site_lbl": "Trp209", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Loss of CTD binding.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "216", "end_pos": "216", "site_lbl": "Asp216", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "No effect on CTD binding.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Trp231", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Decreased binding to CTD.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "238", "end_pos": "238", "site_lbl": "Met238", "weight": 0.0, "mutagenesis": [ { "sequence_org": "M", "sequence_mut": "A", "comment": "Moderate decrease of CTD binding.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Trp250", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Decreased binding to CTD.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] }, { "uniprot_canonical_ac": "F4JCC1-1", "start_pos": "272", "end_pos": "272", "site_lbl": "Trp272", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Strong decrease of CTD binding.", "evidence": [ { "database": "UniProtKB", "id": "F4JCC1", "url": "https://www.uniprot.org/uniprotkb/F4JCC1" }, { "database": "PubMed", "id": "19467629", "url": "https://glygen.org/publication/PubMed/19467629" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JCU0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1007, "chemical_mass": 112567.0, "gene_names": "SUA;F24B22.190;RSN1;SUA;suppressor of abi3-5", "protein_name": "SUPPRESSOR OF ABI3-5", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" }, { "name": "regulation of RNA splicing", "id": "GO:0043484", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043484", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "F4JCU0", "url": "https://www.uniprot.org/uniprotkb/F4JCU0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "269", "end_pos": "269", "site_lbl": "Thr269", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 269, "start_aa": "Thr", "end_pos": 269, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr269", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "845", "end_pos": "845", "site_lbl": "Thr845", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 845, "start_aa": "Thr", "end_pos": 845, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr845", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "154", "end_pos": "154", "site_lbl": "Ser154", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "157", "end_pos": "157", "site_lbl": "Ser157", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "171", "end_pos": "171", "site_lbl": "Ser171", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "205", "end_pos": "205", "site_lbl": "Ser205", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "242", "end_pos": "242", "site_lbl": "Ser242", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "409", "end_pos": "409", "site_lbl": "Ser409", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "411", "end_pos": "411", "site_lbl": "Ser411", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JCU0-1", "start_pos": "709", "end_pos": "709", "site_lbl": "Ser709", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCU0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J4C8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 569, "chemical_mass": 63136.0, "gene_names": "DOK1;EVN;AtDOK1;DOK1;F14D17.110;dolichol kinase 1", "protein_name": "Dolichol kinase EVAN", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" } ], "biological_process": [ { "name": "protein N-linked glycosylation", "id": "GO:0006487", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006487", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" }, { "name": "dolichyl monophosphate biosynthetic process", "id": "GO:0043048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043048", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" }, { "name": "pollen tube reception", "id": "GO:0010483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010483", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" } ], "molecular_function": [ { "name": "dolichol kinase activity", "id": "GO:0004168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004168", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" }, { "name": "nucleotidyltransferase activity", "id": "GO:0016779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016779", "evidence": [ { "database": "UniProtKB", "id": "F4J4C8", "url": "https://www.uniprot.org/uniprotkb/F4J4C8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J4C8-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Asn289", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 289, "start_aa": "Asn", "end_pos": 289, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn289", "evidence": [ { "id": "F4J4C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J4C8#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4J4C8-1", "start_pos": "21", "end_pos": "21", "site_lbl": "Ser21", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J4C8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J4C8" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JAA5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1347, "chemical_mass": 151184.0, "gene_names": "SKI2;F13I12.10;HELPS;T6H20.10", "protein_name": "DExH-box ATP-dependent RNA helicase DExH11", "disease": [], "cellular_component": [ { "name": "Ski complex", "id": "GO:0055087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055087", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" } ], "biological_process": [ { "name": "nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay", "id": "GO:0070478", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070478", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "potassium ion transport", "id": "GO:0006813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006813", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "response to potassium ion", "id": "GO:0035864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035864", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "post-transcriptional gene silencing", "id": "GO:0016441", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016441", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "RNA fragment catabolic process", "id": "GO:0000292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000292", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "positive regulation of wax biosynthetic process", "id": "GO:1904278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904278", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "mRNA catabolic process", "id": "GO:0006402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006402", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "RNA helicase activity", "id": "GO:0003724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003724", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4JAA5", "url": "https://www.uniprot.org/uniprotkb/F4JAA5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JAA5-1", "start_pos": "273", "end_pos": "273", "site_lbl": "Ser273", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JAA5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JAA5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JAA5-1", "start_pos": "275", "end_pos": "275", "site_lbl": "Ser275", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JAA5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JAA5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGP9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 784, "chemical_mass": 84687.0, "gene_names": "IMK3;MRLK;F18O21.60;IMK3;MRLK;meristematic receptor-like kinase", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase IMK3", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGP9", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Asn203", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 203, "start_aa": "Asn", "end_pos": 203, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn203", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "232", "end_pos": "232", "site_lbl": "Asn232", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 232, "start_aa": "Asn", "end_pos": 232, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn232", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "268", "end_pos": "268", "site_lbl": "Asn268", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 268, "start_aa": "Asn", "end_pos": 268, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn268", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "316", "end_pos": "316", "site_lbl": "Asn316", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 316, "start_aa": "Asn", "end_pos": 316, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn316", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "348", "end_pos": "348", "site_lbl": "Asn348", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 348, "start_aa": "Asn", "end_pos": 348, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn348", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "353", "end_pos": "353", "site_lbl": "Asn353", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 353, "start_aa": "Asn", "end_pos": 353, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn353", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "367", "end_pos": "367", "site_lbl": "Asn367", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 367, "start_aa": "Asn", "end_pos": 367, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn367", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Asn404", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 404, "start_aa": "Asn", "end_pos": 404, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn404", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "742", "end_pos": "742", "site_lbl": "Thr742", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 742, "start_aa": "Thr", "end_pos": 742, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr742", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGP9-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Asn82", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 82, "start_aa": "Asn", "end_pos": 82, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn82", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LMX5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 243, "chemical_mass": 26206.0, "gene_names": "CEP9;T20E23.210", "protein_name": "Precursor of CEP9", "disease": [], "biological_process": [ { "name": "response to nitrogen compound", "id": "GO:1901698", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901698", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "response to potassium ion", "id": "GO:0035864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035864", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "cellular response to nitrogen starvation", "id": "GO:0006995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006995", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "response to ammonium ion", "id": "GO:0060359", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060359", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "regulation of leaf morphogenesis", "id": "GO:1901371", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901371", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "nitrate import", "id": "GO:1902025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902025", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "regulation of lateral root development", "id": "GO:2000023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000023", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" } ], "molecular_function": [ { "name": "hormone activity", "id": "GO:0005179", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005179", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LMX5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMX5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LN01-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 583, "chemical_mass": 63785.0, "gene_names": "LAF3;F27K19.30;LAF3 ISF1;LAF3 ISF2;LAF3 ISOFORM 2;LAF3;LONG AFTER FAR-RED 3 ISOFORM 1;LONG AFTER FAR-RED 3", "protein_name": "Protein LONG AFTER FAR-RED 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds", "id": "GO:0016810", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016810", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" } ], "biological_process": [ { "name": "de-etiolation", "id": "GO:0009704", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009704", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" }, { "name": "response to far red light", "id": "GO:0010218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010218", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LN01", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LN01-1", "start_pos": "374", "end_pos": "374", "site_lbl": "Asn374", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 374, "start_aa": "Asn", "end_pos": 374, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn374", "evidence": [ { "id": "A0A1I9LN01", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "A0A1I9LN01-1", "start_pos": "55", "end_pos": "55", "site_lbl": "Asn55", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 55, "start_aa": "Asn", "end_pos": 55, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn55", "evidence": [ { "id": "A0A1I9LN01", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LN01#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGP2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 878, "chemical_mass": 98678.0, "gene_names": "MEE39;F18L15.50;MEE39;maternal effect embryo arrest 39", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase MEE39", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" } ], "biological_process": [ { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" }, { "name": "endosperm development", "id": "GO:0009960", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009960", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "183", "end_pos": "183", "site_lbl": "Asn183", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 183, "start_aa": "Asn", "end_pos": 183, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn183", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Asn203", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 203, "start_aa": "Asn", "end_pos": 203, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn203", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Asn235", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 235, "start_aa": "Asn", "end_pos": 235, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn235", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "290", "end_pos": "290", "site_lbl": "Asn290", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 290, "start_aa": "Asn", "end_pos": 290, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn290", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Asn404", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 404, "start_aa": "Asn", "end_pos": 404, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn404", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "418", "end_pos": "418", "site_lbl": "Asn418", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 418, "start_aa": "Asn", "end_pos": 418, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn418", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "445", "end_pos": "445", "site_lbl": "Asn445", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 445, "start_aa": "Asn", "end_pos": 445, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn445", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Asn466", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 466, "start_aa": "Asn", "end_pos": 466, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn466", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Ser468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGP2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGP2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Thr557", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "639", "end_pos": "639", "site_lbl": "Tyr639", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "726", "end_pos": "726", "site_lbl": "Ser726", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "727", "end_pos": "727", "site_lbl": "Thr727", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "732", "end_pos": "732", "site_lbl": "Thr732", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_canonical_ac": "C0LGP2-1", "start_pos": "740", "end_pos": "740", "site_lbl": "Tyr740", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGP2", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IXE7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1189, "chemical_mass": 131329.0, "gene_names": "IDM1;ROS4;IDM1;K15M2.12;REPRESSOR OF SILENCING 4;ROS4;increased DNA methylation 1", "protein_name": "Increased DNA methylation 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "gene silencing by siRNA-directed DNA methylation", "id": "GO:0080188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080188", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "histone acetyltransferase activity", "id": "GO:0004402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004402", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "double-stranded methylated DNA binding", "id": "GO:0010385", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010385", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "histone H3K18 acetyltransferase activity", "id": "GO:0043993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043993", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" }, { "name": "acyltransferase activity, transferring groups other than amino-acyl groups", "id": "GO:0016747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016747", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "307", "end_pos": "307", "site_lbl": "Thr307", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXE7" } ] } ] }, { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "732", "end_pos": "732", "site_lbl": "Cys732", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "W", "comment": "Loss of binding to histone H3 and loss of acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" }, { "database": "PubMed", "id": "22700931", "url": "https://glygen.org/publication/PubMed/22700931" } ] } ] }, { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "740", "end_pos": "740", "site_lbl": "Cys740", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "W", "comment": "Loss of binding to histone H3, but no effect on acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" }, { "database": "PubMed", "id": "22700931", "url": "https://glygen.org/publication/PubMed/22700931" } ] } ] }, { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "924", "end_pos": "924", "site_lbl": "Asp924", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Strongly decreased acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" }, { "database": "PubMed", "id": "22700931", "url": "https://glygen.org/publication/PubMed/22700931" } ] } ] }, { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "941", "end_pos": "941", "site_lbl": "Glu941", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "Q", "comment": "Loss of acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" }, { "database": "PubMed", "id": "22700931", "url": "https://glygen.org/publication/PubMed/22700931" } ] } ] }, { "uniprot_canonical_ac": "F4IXE7-1", "start_pos": "942", "end_pos": "942", "site_lbl": "Met942", "weight": 0.0, "mutagenesis": [ { "sequence_org": "M", "sequence_mut": "A", "comment": "Decreased acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IXE7", "url": "https://www.uniprot.org/uniprotkb/F4IXE7" }, { "database": "PubMed", "id": "22700931", "url": "https://glygen.org/publication/PubMed/22700931" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A2RVQ5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 240, "chemical_mass": 27428.0, "gene_names": "AGL16;AGAMOUS-like 16;AGL16;F28O9.80", "protein_name": "Agamous-like MADS-box protein AGL16", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "stomatal lineage progression", "id": "GO:0010440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010440", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" }, { "name": "regulation of long-day photoperiodism, flowering", "id": "GO:0048586", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048586", "evidence": [ { "database": "UniProtKB", "id": "A2RVQ5", "url": "https://www.uniprot.org/uniprotkb/A2RVQ5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J339-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1194, "chemical_mass": 136132.0, "gene_names": "RPP1;F14L2_30;RPP1;cog1;recognition of peronospora parasitica 1", "protein_name": "Probable disease resistance protein RPP1", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" } ], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "innate immune receptor activity", "id": "GO:0140376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140376", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "innate immune response-activating signaling pathway", "id": "GO:0002758", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002758", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "response to oomycetes", "id": "GO:0002239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002239", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "positive regulation of plant-type hypersensitive response", "id": "GO:0034052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034052", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "response to other organism", "id": "GO:0051707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051707", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4J339", "url": "https://www.uniprot.org/uniprotkb/F4J339" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J339-1", "start_pos": "1173", "end_pos": "1173", "site_lbl": "Ser1173", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J339", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J339" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J339-1", "start_pos": "1174", "end_pos": "1174", "site_lbl": "Ser1174", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J339", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J339" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J339-1", "start_pos": "1178", "end_pos": "1178", "site_lbl": "Ser1178", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J339", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J339" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J7T2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1907, "chemical_mass": 206412.0, "gene_names": "ATEAF1B;EAF1B;K7P8.16", "protein_name": "Chromatin modification-related protein EAF1 B", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "histone H4 acetyltransferase activity", "id": "GO:0010485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010485", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "NuA4 histone acetyltransferase complex", "id": "GO:0035267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035267", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of photoperiodism, flowering", "id": "GO:2000028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000028", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "F4J7T2", "url": "https://www.uniprot.org/uniprotkb/F4J7T2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "1239", "end_pos": "1239", "site_lbl": "Thr1239", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1239, "start_aa": "Thr", "end_pos": 1239, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1239", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "1308", "end_pos": "1308", "site_lbl": "Thr1308", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1308, "start_aa": "Thr", "end_pos": 1308, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1308", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "1703", "end_pos": "1703", "site_lbl": "Thr1703", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1703, "start_aa": "Thr", "end_pos": 1703, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1703", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "1113", "end_pos": "1113", "site_lbl": "Ser1113", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "114", "end_pos": "114", "site_lbl": "Ser114", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "219", "end_pos": "219", "site_lbl": "Ser219", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Ser321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Thr322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4J7T2-1", "start_pos": "325", "end_pos": "325", "site_lbl": "Ser325", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J7T2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J7T2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1I9LQ53-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 672, "chemical_mass": 74156.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A1I9LQ53", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ53" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1I9LQ53-1", "start_pos": "397", "end_pos": "397", "site_lbl": "Ser397", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SNE4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SNE4" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFA8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 664, "chemical_mass": 74722.0, "gene_names": "INVC;N-INVC;F5E6.17;F5E6_17;N-InvC;neutral invertase C", "protein_name": "Alkaline/neutral invertase C, mitochondrial", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" } ], "biological_process": [ { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "sucrose catabolic process", "id": "GO:0005987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005987", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "regulation of seed germination", "id": "GO:0010029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010029", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" } ], "molecular_function": [ { "name": "sucrose alpha-glucosidase activity", "id": "GO:0004575", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004575", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "endo-alpha-N-acetylgalactosaminidase activity", "id": "GO:0033926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033926", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" }, { "name": "beta-fructofuranosidase activity", "id": "GO:0004564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004564", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "125", "end_pos": "125", "site_lbl": "Ser125", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ] } ] }, { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "316", "end_pos": "316", "site_lbl": "Tyr316", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFA8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "320", "end_pos": "320", "site_lbl": "Thr320", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFA8" } ] } ] }, { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Tyr323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFA8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Ser41", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ] } ] }, { "uniprot_canonical_ac": "B9DFA8-1", "start_pos": "657", "end_pos": "657", "site_lbl": "Ser657", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFA8", "url": "https://www.uniprot.org/uniprotkb/B9DFA8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A1YKT1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 433, "chemical_mass": 49676.0, "gene_names": "BRC1;TCP18;ATTCP18;AtBRC1;BRANCHED 1;BRC1;K24M9.4;TBL1;TCP18", "protein_name": "Transcription factor TCP18", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "regulation of meristem growth", "id": "GO:0010075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010075", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "secondary shoot formation", "id": "GO:0010223", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010223", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "regulation of secondary shoot formation", "id": "GO:2000032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000032", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" }, { "name": "response to strigolactone", "id": "GO:1902347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902347", "evidence": [ { "database": "UniProtKB", "id": "A1YKT1", "url": "https://www.uniprot.org/uniprotkb/A1YKT1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J8D3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1176, "chemical_mass": 130908.0, "gene_names": "TPLATE;F28J7.11;F28J7_11;F4P13.33;T22;TPLATE", "protein_name": "Protein TPLATE", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "cell plate", "id": "GO:0009504", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009504", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" } ], "biological_process": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "cytokinesis by cell plate formation", "id": "GO:0000911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000911", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "1100", "end_pos": "1100", "site_lbl": "Ser1100", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J8D3", "url": "https://www.uniprot.org/uniprotkb/F4J8D3" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "197", "end_pos": "197", "site_lbl": "Ser197", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "278", "end_pos": "278", "site_lbl": "Ser278", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "690", "end_pos": "690", "site_lbl": "Tyr690", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "692", "end_pos": "692", "site_lbl": "Ser692", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "980", "end_pos": "980", "site_lbl": "Ser980", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "F4J8D3-1", "start_pos": "993", "end_pos": "993", "site_lbl": "Tyr993", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8D3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8D3" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I8I0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 596, "chemical_mass": 67272.0, "gene_names": "SUN4;AtSUN4;F26A9.26;F26A9_26;SUN-domain protein 4;SUN4", "protein_name": "SUN domain-containing protein 4", "disease": [], "cellular_component": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" } ], "biological_process": [ { "name": "nucleus organization", "id": "GO:0006997", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006997", "evidence": [ { "database": "UniProtKB", "id": "F4I8I0", "url": "https://www.uniprot.org/uniprotkb/F4I8I0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I8I0-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Ser253", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8I0" } ] } ] }, { "uniprot_canonical_ac": "F4I8I0-1", "start_pos": "256", "end_pos": "256", "site_lbl": "Thr256", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8I0" } ] } ] }, { "uniprot_canonical_ac": "F4I8I0-1", "start_pos": "260", "end_pos": "260", "site_lbl": "Thr260", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8I0" } ] } ] }, { "uniprot_canonical_ac": "F4I8I0-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8I0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I8I0-1", "start_pos": "383", "end_pos": "383", "site_lbl": "Ser383", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I8I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I8I0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0SUT9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1209, "chemical_mass": 134993.0, "gene_names": "JMJ16;PKDM7D;F22O13.10;F22O13_10;PKDM7D", "protein_name": "Putative lysine-specific demethylase JMJ16", "disease": [], "molecular_function": [ { "name": "histone H3K4me/H3K4me2/H3K4me3 demethylase activity", "id": "GO:0034647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034647", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "SUMO binding", "id": "GO:0032183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032183", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "histone H3K9 demethylase activity", "id": "GO:0032454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032454", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "histone H3K4 demethylase activity", "id": "GO:0032453", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032453", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "dioxygenase activity", "id": "GO:0051213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051213", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" } ], "biological_process": [ { "name": "reactive oxygen species biosynthetic process", "id": "GO:1903409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903409", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "developmental growth", "id": "GO:0048589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048589", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "meiotic chromosome condensation", "id": "GO:0010032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010032", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "positive regulation of chromosome condensation", "id": "GO:1905821", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905821", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "plant organ development", "id": "GO:0099402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099402", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "negative regulation of leaf senescence", "id": "GO:1900056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900056", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "system development", "id": "GO:0048731", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048731", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "negative regulation of developmental process", "id": "GO:0051093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051093", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0SUT9-1", "start_pos": "951", "end_pos": "951", "site_lbl": "Thr951", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 951, "start_aa": "Thr", "end_pos": 951, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr951", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0SUT9-1", "start_pos": "462", "end_pos": "462", "site_lbl": "Thr462", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0SUT9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0SUT9" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "C0SUT9-1", "start_pos": "407", "end_pos": "407", "site_lbl": "His407", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Abolished H3K4 demethylase activity leading to early leaf senescence; when associated with A-409.", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" }, { "database": "PubMed", "id": "30712008", "url": "https://glygen.org/publication/PubMed/30712008" } ] } ] }, { "uniprot_canonical_ac": "C0SUT9-1", "start_pos": "409", "end_pos": "409", "site_lbl": "Glu409", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "Abolished H3K4 demethylase activity leading to early leaf senescence; when associated with A-407.", "evidence": [ { "database": "UniProtKB", "id": "C0SUT9", "url": "https://www.uniprot.org/uniprotkb/C0SUT9" }, { "database": "PubMed", "id": "30712008", "url": "https://glygen.org/publication/PubMed/30712008" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H7A9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 210, "chemical_mass": 23851.0, "gene_names": "PXG7;CLO7;F26F24.33;F26F24.9;F26F24_33;F26F24_9", "protein_name": "Probable peroxygenase 7", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipase activity", "id": "GO:0016298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016298", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "pmid": "" }, { "name": "monooxygenase activity", "id": "GO:0004497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004497", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "pmid": "" }, { "name": "plant seed peroxygenase activity", "id": "GO:1990137", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990137", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3H7A9-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Ser188", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B3H7A9", "url": "https://www.uniprot.org/uniprotkb/B3H7A9" } ] } ] }, { "uniprot_canonical_ac": "B3H7A9-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Thr5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H7A9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H7A9" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVY0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 625, "chemical_mass": 72406.0, "gene_names": "CER1;AT1G02200;CER1;CER22;ECERIFERUM 1;ECERIFERUM 22;POSSIBLE ALDEHYDE DECARBONYLASE;T6A9.16;T7I23.10", "protein_name": "Very-long-chain aldehyde decarbonylase CER1", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "aldehyde oxygenase (deformylating) activity", "id": "GO:0071771", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071771", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "wax biosynthetic process", "id": "GO:0010025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010025", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "alkane biosynthetic process", "id": "GO:0043447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043447", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "cutin-based cuticle development", "id": "GO:0160062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160062", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" }, { "name": "lipid biosynthetic process", "id": "GO:0008610", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008610", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVY0-1", "start_pos": "146", "end_pos": "146", "site_lbl": "His146", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" }, { "database": "PubMed", "id": "22773744", "url": "https://glygen.org/publication/PubMed/22773744" } ] } ] }, { "uniprot_canonical_ac": "F4HVY0-1", "start_pos": "159", "end_pos": "159", "site_lbl": "His159", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" }, { "database": "PubMed", "id": "22773744", "url": "https://glygen.org/publication/PubMed/22773744" } ] } ] }, { "uniprot_canonical_ac": "F4HVY0-1", "start_pos": "248", "end_pos": "248", "site_lbl": "His248", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "F4HVY0", "url": "https://www.uniprot.org/uniprotkb/F4HVY0" }, { "database": "PubMed", "id": "22773744", "url": "https://glygen.org/publication/PubMed/22773744" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGF5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1072, "chemical_mass": 116725.0, "gene_names": "RGI5;F12G12.7;F12G12_7;RGFR5", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI5", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "peptide receptor activity", "id": "GO:0001653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001653", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" } ], "biological_process": [ { "name": "hormone-mediated signaling pathway", "id": "GO:0009755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009755", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "maintenance of meristem identity", "id": "GO:0010074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010074", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "176", "end_pos": "176", "site_lbl": "Asn176", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 176, "start_aa": "Asn", "end_pos": 176, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn176", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "213", "end_pos": "213", "site_lbl": "Asn213", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 213, "start_aa": "Asn", "end_pos": 213, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn213", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "306", "end_pos": "306", "site_lbl": "Asn306", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 306, "start_aa": "Asn", "end_pos": 306, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn306", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "354", "end_pos": "354", "site_lbl": "Asn354", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 354, "start_aa": "Asn", "end_pos": 354, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn354", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Asn402", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 402, "start_aa": "Asn", "end_pos": 402, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn402", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Asn498", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 498, "start_aa": "Asn", "end_pos": 498, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn498", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "546", "end_pos": "546", "site_lbl": "Asn546", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 546, "start_aa": "Asn", "end_pos": 546, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn546", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "650", "end_pos": "650", "site_lbl": "Asn650", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 650, "start_aa": "Asn", "end_pos": 650, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn650", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "655", "end_pos": "655", "site_lbl": "Asn655", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 655, "start_aa": "Asn", "end_pos": 655, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn655", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "80", "end_pos": "80", "site_lbl": "Asn80", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 80, "start_aa": "Asn", "end_pos": 80, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn80", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "97", "end_pos": "97", "site_lbl": "Asn97", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 97, "start_aa": "Asn", "end_pos": 97, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn97", "evidence": [ { "id": "C0LGF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "764", "end_pos": "764", "site_lbl": "Thr764", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "842", "end_pos": "842", "site_lbl": "Ser842", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGF5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGF5" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "851", "end_pos": "851", "site_lbl": "Tyr851", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "887", "end_pos": "887", "site_lbl": "Tyr887", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "936", "end_pos": "936", "site_lbl": "Ser936", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "944", "end_pos": "944", "site_lbl": "Tyr944", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "951", "end_pos": "951", "site_lbl": "Tyr951", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] }, { "uniprot_canonical_ac": "C0LGF5-1", "start_pos": "952", "end_pos": "952", "site_lbl": "Thr952", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF5", "url": "https://www.uniprot.org/uniprotkb/C0LGF5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I7Y4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 507, "chemical_mass": 57611.0, "gene_names": "BSK11;BSK11;F8A12.21;F8A12_21;brassinosteroid-signaling kinase 11", "protein_name": "Serine/threonine-protein kinase BSK11", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "pmid": "" } ], "biological_process": [ { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "F4I7Y4", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I240-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1208, "chemical_mass": 137055.0, "gene_names": "JMJ17;F2K11.14;F2K11_14", "protein_name": "Lysine-specific demethylase JMJ17", "disease": [], "molecular_function": [ { "name": "histone H3K4me/H3K4me2/H3K4me3 demethylase activity", "id": "GO:0034647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034647", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "histone H3K4 demethylase activity", "id": "GO:0032453", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032453", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "histone demethylase activity", "id": "GO:0032452", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032452", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "developmental growth", "id": "GO:0048589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048589", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "regulation of stomatal closure", "id": "GO:0090333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090333", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "plant organ development", "id": "GO:0099402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099402", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I240-1", "start_pos": "779", "end_pos": "779", "site_lbl": "Thr779", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I240", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I240" } ] } ] }, { "uniprot_canonical_ac": "F4I240-1", "start_pos": "172", "end_pos": "172", "site_lbl": "His172", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Abolished histone H3 'Lys-4' (H3K4me) demethylase activity toward H3K4me1, H3K4me2 and H3K4me3 leading to ectopic increase in genome-wide H3K4me1, H3K4me2 and H3K4me3 levels and a better dehydration stress tolerance; when associated with A-174.", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" }, { "database": "PubMed", "id": "31038749", "url": "https://glygen.org/publication/PubMed/31038749" } ] } ] }, { "uniprot_canonical_ac": "F4I240-1", "start_pos": "174", "end_pos": "174", "site_lbl": "Glu174", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "Abolished histone H3 'Lys-4' (H3K4me) demethylase activity toward H3K4me1, H3K4me2 and H3K4me3 leading to ectopic increase in genome-wide H3K4me1, H3K4me2 and H3K4me3 levels and a better dehydration stress tolerance; when associated with A-172.", "evidence": [ { "database": "UniProtKB", "id": "F4I240", "url": "https://www.uniprot.org/uniprotkb/F4I240" }, { "database": "PubMed", "id": "31038749", "url": "https://glygen.org/publication/PubMed/31038749" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I6M1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1050, "chemical_mass": 117234.0, "gene_names": "POLGAMMA2;POLIA;F8A12.8;F8A12_8;POLGAMMA2;PolIA;polymerase I A;polymerase gamma 2", "protein_name": "DNA polymerase I A, chloroplastic/mitochondrial", "disease": [], "molecular_function": [ { "name": "DNA-directed DNA polymerase activity", "id": "GO:0003887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003887", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "3'-5' exonuclease activity", "id": "GO:0008408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008408", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" } ], "biological_process": [ { "name": "double-strand break repair", "id": "GO:0006302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006302", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "mitochondrial DNA replication", "id": "GO:0006264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006264", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "plastid DNA replication", "id": "GO:0033259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033259", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4I6M1", "url": "https://www.uniprot.org/uniprotkb/F4I6M1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HXP9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1538, "chemical_mass": 174626.0, "gene_names": "EDR1;XI-C;XIC;ATEDR1;ATXIC;ENHANCED DISEASE RESISTANCE 1;F22O13.200;F22O13.20;F22O13_200;F22O13_20;MAPKK KINASE EDR1;MYOSIN XI C;XIC", "protein_name": "Myosin-9", "disease": [], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "cytoskeletal motor activity", "id": "GO:0003774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003774", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "microfilament motor activity", "id": "GO:0000146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000146", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "myosin complex", "id": "GO:0016459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016459", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" } ], "biological_process": [ { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "actin filament-based movement", "id": "GO:0030048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030048", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4HXP9", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HXP9-1", "start_pos": "1531", "end_pos": "1531", "site_lbl": "Ser1531", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXP9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXP9" } ] } ] }, { "uniprot_canonical_ac": "F4HXP9-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Thr244", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXP9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXP9" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGE0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1014, "chemical_mass": 112902.0, "gene_names": "DSI-1VOC;ATDSI-1VOC;F24B9.28;F24B9.29;F24B9_29", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07650", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" } ], "biological_process": [ { "name": "response to nutrient levels", "id": "GO:0031667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031667", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "101", "end_pos": "101", "site_lbl": "Asn101", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 101, "start_aa": "Asn", "end_pos": 101, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn101", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Asn165", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 165, "start_aa": "Asn", "end_pos": 165, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn165", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Asn210", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 210, "start_aa": "Asn", "end_pos": 210, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn210", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "220", "end_pos": "220", "site_lbl": "Asn220", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 220, "start_aa": "Asn", "end_pos": 220, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn220", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Asn231", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 231, "start_aa": "Asn", "end_pos": 231, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn231", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "362", "end_pos": "362", "site_lbl": "Asn362", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 362, "start_aa": "Asn", "end_pos": 362, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn362", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Asn389", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 389, "start_aa": "Asn", "end_pos": 389, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn389", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "474", "end_pos": "474", "site_lbl": "Asn474", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 474, "start_aa": "Asn", "end_pos": 474, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn474", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "481", "end_pos": "481", "site_lbl": "Asn481", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 481, "start_aa": "Asn", "end_pos": 481, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn481", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "511", "end_pos": "511", "site_lbl": "Asn511", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 511, "start_aa": "Asn", "end_pos": 511, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn511", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Asn570", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 570, "start_aa": "Asn", "end_pos": 570, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn570", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Asn76", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 76, "start_aa": "Asn", "end_pos": 76, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn76", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "87", "end_pos": "87", "site_lbl": "Asn87", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 87, "start_aa": "Asn", "end_pos": 87, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn87", "evidence": [ { "id": "C0LGE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "1002", "end_pos": "1002", "site_lbl": "Ser1002", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "318", "end_pos": "318", "site_lbl": "Ser318", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "667", "end_pos": "667", "site_lbl": "Thr667", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "751", "end_pos": "751", "site_lbl": "Tyr751", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "809", "end_pos": "809", "site_lbl": "Ser809", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "838", "end_pos": "838", "site_lbl": "Ser838", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" }, { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "839", "end_pos": "839", "site_lbl": "Thr839", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" }, { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "844", "end_pos": "844", "site_lbl": "Thr844", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "852", "end_pos": "852", "site_lbl": "Tyr852", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "989", "end_pos": "989", "site_lbl": "Ser989", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE0", "url": "https://www.uniprot.org/uniprotkb/C0LGE0" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "991", "end_pos": "991", "site_lbl": "Ser991", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "997", "end_pos": "997", "site_lbl": "Thr997", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "C0LGE0-1", "start_pos": "999", "end_pos": "999", "site_lbl": "Ser999", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HQM3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 779, "chemical_mass": 86771.0, "gene_names": "ATNCER1;NCER1;F22G5.28;F22G5_28", "protein_name": "Neutral ceramidase 1", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" } ], "molecular_function": [ { "name": "N-acylsphingosine amidohydrolase activity", "id": "GO:0017040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017040", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" } ], "biological_process": [ { "name": "sphingosine biosynthetic process", "id": "GO:0046512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046512", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "ceramide catabolic process", "id": "GO:0046514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046514", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "cellular response to oxidative stress", "id": "GO:0034599", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034599", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "long-chain fatty acid biosynthetic process", "id": "GO:0042759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042759", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" }, { "name": "intracellular sphingolipid homeostasis", "id": "GO:0090156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090156", "evidence": [ { "database": "UniProtKB", "id": "F4HQM3", "url": "https://www.uniprot.org/uniprotkb/F4HQM3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HQM3-1", "start_pos": "368", "end_pos": "368", "site_lbl": "Asn368", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 368, "start_aa": "Asn", "end_pos": 368, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn368", "evidence": [ { "id": "F4HQM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQM3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4HQM3-1", "start_pos": "432", "end_pos": "432", "site_lbl": "Asn432", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 432, "start_aa": "Asn", "end_pos": 432, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn432", "evidence": [ { "id": "F4HQM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQM3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4HQM3-1", "start_pos": "667", "end_pos": "667", "site_lbl": "Asn667", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 667, "start_aa": "Asn", "end_pos": 667, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn667", "evidence": [ { "id": "F4HQM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQM3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGE4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 882, "chemical_mass": 97022.0, "gene_names": "F5O11.21;F5O11_21;T12C24.1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g12460", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "121", "end_pos": "121", "site_lbl": "Asn121", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 121, "start_aa": "Asn", "end_pos": 121, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn121", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "261", "end_pos": "261", "site_lbl": "Asn261", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 261, "start_aa": "Asn", "end_pos": 261, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn261", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Asn266", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 266, "start_aa": "Asn", "end_pos": 266, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn266", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Asn321", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 321, "start_aa": "Asn", "end_pos": 321, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn321", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "341", "end_pos": "341", "site_lbl": "Asn341", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 341, "start_aa": "Asn", "end_pos": 341, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn341", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Asn402", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 402, "start_aa": "Asn", "end_pos": 402, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn402", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Asn417", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 417, "start_aa": "Asn", "end_pos": 417, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn417", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "426", "end_pos": "426", "site_lbl": "Asn426", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 426, "start_aa": "Asn", "end_pos": 426, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn426", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "458", "end_pos": "458", "site_lbl": "Asn458", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 458, "start_aa": "Asn", "end_pos": 458, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn458", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "463", "end_pos": "463", "site_lbl": "Asn463", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 463, "start_aa": "Asn", "end_pos": 463, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn463", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Asn76", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 76, "start_aa": "Asn", "end_pos": 76, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn76", "evidence": [ { "id": "C0LGE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGE4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "589", "end_pos": "589", "site_lbl": "Thr589", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "770", "end_pos": "770", "site_lbl": "Tyr770", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGE4", "url": "https://www.uniprot.org/uniprotkb/C0LGE4" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "807", "end_pos": "807", "site_lbl": "Ser807", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGE4-1", "start_pos": "828", "end_pos": "828", "site_lbl": "Ser828", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGE4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGE4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVW5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 598, "chemical_mass": 67702.0, "gene_names": "VAD1;T7I23.28;T7I23_28;VAD1;VASCULAR ASSOCIATED DEATH1", "protein_name": "Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "negative regulation of programmed cell death", "id": "GO:0043069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043069", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" }, { "name": "ethylene-activated signaling pathway", "id": "GO:0009873", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009873", "evidence": [ { "database": "UniProtKB", "id": "F4HVW5", "url": "https://www.uniprot.org/uniprotkb/F4HVW5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "329", "end_pos": "329", "site_lbl": "Asn329", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 329, "start_aa": "Asn", "end_pos": 329, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn329", "evidence": [ { "id": "F4HVW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVW5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "494", "end_pos": "494", "site_lbl": "Asn494", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 494, "start_aa": "Asn", "end_pos": 494, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn494", "evidence": [ { "id": "F4HVW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVW5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "61", "end_pos": "61", "site_lbl": "Asn61", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 61, "start_aa": "Asn", "end_pos": 61, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn61", "evidence": [ { "id": "F4HVW5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVW5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Ser203", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "204", "end_pos": "204", "site_lbl": "Ser204", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Ser37", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "38", "end_pos": "38", "site_lbl": "Ser38", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Ser468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "49", "end_pos": "49", "site_lbl": "Ser49", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Ser52", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "54", "end_pos": "54", "site_lbl": "Ser54", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Ser56", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HVW5-1", "start_pos": "63", "end_pos": "63", "site_lbl": "Ser63", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVW5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVW5" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I171-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1335, "chemical_mass": 146345.0, "gene_names": "MED15A;NRB4;F7H2.12;F7H2_12;MED15_2;NRB4;Non-Recognition-of-BTH 4", "protein_name": "Mediator of RNA polymerase II transcription subunit 15a", "disease": [], "molecular_function": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" }, { "name": "positive regulation of fatty acid biosynthetic process", "id": "GO:0045723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045723", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "F4I171", "url": "https://www.uniprot.org/uniprotkb/F4I171" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I171-1", "start_pos": "1138", "end_pos": "1138", "site_lbl": "Ser1138", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I171", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I171" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HQE2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1040, "chemical_mass": 116632.0, "gene_names": "RTEL1;F18B13.3;F18B13_3;F19K16.9", "protein_name": "Regulator of telomere elongation helicase 1 homolog", "disease": [], "biological_process": [ { "name": "telomeric loop disassembly", "id": "GO:0090657", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090657", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "negative regulation of t-circle formation", "id": "GO:1904430", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904430", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "telomere maintenance", "id": "GO:0000723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000723", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "negative regulation of DNA recombination", "id": "GO:0045910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045910", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "recombinational repair", "id": "GO:0000725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000725", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "regulation of double-strand break repair via homologous recombination", "id": "GO:0010569", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010569", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication", "id": "GO:0070716", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070716", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "maintenance of rDNA", "id": "GO:0043007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043007", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "DNA polymerase binding", "id": "GO:0070182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070182", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides", "id": "GO:0016818", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016818", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HQE2", "url": "https://www.uniprot.org/uniprotkb/F4HQE2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HQE2-1", "start_pos": "802", "end_pos": "802", "site_lbl": "Thr802", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 802, "start_aa": "Thr", "end_pos": 802, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr802", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HQE2-1", "start_pos": "113", "end_pos": "113", "site_lbl": "Thr113", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQE2" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] } ] }, { "uniprot_canonical_ac": "F4HQE2-1", "start_pos": "879", "end_pos": "879", "site_lbl": "Ser879", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQE2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HQE2-1", "start_pos": "953", "end_pos": "953", "site_lbl": "Ser953", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQE2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ICB6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 709, "chemical_mass": 79535.0, "gene_names": "IBS1;F6A14.22;F6A14_22;IBS1;IMPAIRED IN BABA-INDUCED STERILITY 1", "protein_name": "Protein IMPAIRED IN BABA-INDUCED STERILITY 1", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "RNA polymerase II CTD heptapeptide repeat kinase activity", "id": "GO:0008353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008353", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "cyclin-dependent protein kinase holoenzyme complex", "id": "GO:0000307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000307", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "positive regulation of defense response to bacterium", "id": "GO:1900426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900426", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "positive regulation of transcription elongation by RNA polymerase II", "id": "GO:0032968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032968", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "defense response to oomycetes", "id": "GO:0002229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002229", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "regulation of salicylic acid mediated signaling pathway", "id": "GO:2000031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000031", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" }, { "name": "positive regulation of defense response to oomycetes", "id": "GO:1902290", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902290", "evidence": [ { "database": "UniProtKB", "id": "F4ICB6", "url": "https://www.uniprot.org/uniprotkb/F4ICB6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "13", "end_pos": "13", "site_lbl": "Thr13", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 13, "start_aa": "Thr", "end_pos": 13, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr13", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "19", "end_pos": "19", "site_lbl": "Ser19", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "290", "end_pos": "290", "site_lbl": "Thr290", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "30", "end_pos": "30", "site_lbl": "Ser30", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "603", "end_pos": "603", "site_lbl": "Thr603", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "605", "end_pos": "605", "site_lbl": "Ser605", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "671", "end_pos": "671", "site_lbl": "Ser671", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4ICB6-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Ser76", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICB6" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AQ95-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 97, "chemical_mass": 10464.0, "gene_names": "STMP4;F5I14", "protein_name": "Secreted transmembrane peptide 4", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" } ], "biological_process": [ { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" } ], "molecular_function": [ { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AQ95", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ95" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A2RVU1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 175, "chemical_mass": 19317.0, "gene_names": "MWL1;F27M3.8;F27M3_8", "protein_name": "Protein MODIFYING WALL LIGNIN-1", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" } ], "biological_process": [ { "name": "lignin metabolic process", "id": "GO:0009808", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009808", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" }, { "name": "lignin biosynthetic process", "id": "GO:0009809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009809", "evidence": [ { "database": "UniProtKB", "id": "A2RVU1", "url": "https://www.uniprot.org/uniprotkb/A2RVU1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A9LNK9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 631, "chemical_mass": 70015.0, "gene_names": "CPSF30;ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30;ATCPSF30;CPSF30;F26G16.5;F26G16.6;F26G16_6;OXT6;cleavage and polyadenylation specificity factor 30", "protein_name": "30-kDa cleavage and polyadenylation specificity factor 30", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "N6-methyladenosine-containing RNA reader activity", "id": "GO:1990247", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990247", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "mRNA cleavage and polyadenylation specificity factor complex", "id": "GO:0005847", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005847", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "regulation of mRNA splicing, via spliceosome", "id": "GO:0048024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048024", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "positive regulation of programmed cell death", "id": "GO:0043068", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043068", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "mRNA 3'-end processing", "id": "GO:0031124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031124", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "regulation of mRNA 3'-end processing", "id": "GO:0031440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031440", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "positive regulation of plant-type hypersensitive response", "id": "GO:0034052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034052", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "regulation of salicylic acid mediated signaling pathway", "id": "GO:2000031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000031", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" }, { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A9LNK9-1", "start_pos": "324", "end_pos": "324", "site_lbl": "Ser324", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LNK9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LNK9" } ] } ] }, { "uniprot_canonical_ac": "A9LNK9-1", "start_pos": "584", "end_pos": "584", "site_lbl": "Ser584", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LNK9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LNK9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A9LNK9-1", "start_pos": "610", "end_pos": "610", "site_lbl": "Ser610", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "A9LNK9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LNK9" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A9LNK9-1", "start_pos": "612", "end_pos": "612", "site_lbl": "Ser612", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A9LNK9", "url": "https://www.uniprot.org/uniprotkb/A9LNK9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "A9LNK9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LNK9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HS99-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1797, "chemical_mass": 198774.0, "gene_names": "REC1;F6F3.12;F6F3_12", "protein_name": "Protein REDUCED CHLOROPLAST COVERAGE 1", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of glucose metabolic process", "id": "GO:0010906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010906", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" }, { "name": "chloroplast localization", "id": "GO:0019750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019750", "evidence": [ { "database": "UniProtKB", "id": "F4HS99", "url": "https://www.uniprot.org/uniprotkb/F4HS99" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1114", "end_pos": "1114", "site_lbl": "Thr1114", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1184", "end_pos": "1184", "site_lbl": "Ser1184", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1193", "end_pos": "1193", "site_lbl": "Ser1193", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1198", "end_pos": "1198", "site_lbl": "Ser1198", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1320", "end_pos": "1320", "site_lbl": "Ser1320", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1349", "end_pos": "1349", "site_lbl": "Ser1349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1354", "end_pos": "1354", "site_lbl": "Thr1354", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1358", "end_pos": "1358", "site_lbl": "Thr1358", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1359", "end_pos": "1359", "site_lbl": "Ser1359", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1397", "end_pos": "1397", "site_lbl": "Ser1397", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1399", "end_pos": "1399", "site_lbl": "Ser1399", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1400", "end_pos": "1400", "site_lbl": "Tyr1400", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Ser146", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "148", "end_pos": "148", "site_lbl": "Thr148", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "149", "end_pos": "149", "site_lbl": "Ser149", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "153", "end_pos": "153", "site_lbl": "Ser153", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "1795", "end_pos": "1795", "site_lbl": "Ser1795", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "594", "end_pos": "594", "site_lbl": "Ser594", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "605", "end_pos": "605", "site_lbl": "Ser605", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HS99-1", "start_pos": "606", "end_pos": "606", "site_lbl": "Ser606", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HS99", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HS99" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MQL1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1082, "chemical_mass": 120444.0, "gene_names": "MUSE13;TRAF1B;F19P19.26;F19P19_26;MUSE13", "protein_name": "TNF receptor-associated factor homolog 1b", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" } ], "biological_process": [ { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" }, { "name": "autophagosome organization", "id": "GO:1905037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905037", "evidence": [ { "database": "UniProtKB", "id": "A8MQL1", "url": "https://www.uniprot.org/uniprotkb/A8MQL1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MQL1-1", "start_pos": "1001", "end_pos": "1001", "site_lbl": "Ser1001", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQL1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQL1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MQL1-1", "start_pos": "716", "end_pos": "716", "site_lbl": "Ser716", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQL1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQL1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "A8MQL1-1", "start_pos": "717", "end_pos": "717", "site_lbl": "Ser717", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQL1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQL1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DGU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 267, "chemical_mass": 29879.0, "gene_names": "TPK1;F22D16.12;F22D16_12;TPK1;thiamin pyrophosphokinase1", "protein_name": "Thiamine pyrophosphokinase 1", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" }, { "name": "thiamine diphosphokinase activity", "id": "GO:0004788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004788", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" }, { "name": "thiamine binding", "id": "GO:0030975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030975", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" } ], "biological_process": [ { "name": "thiamine diphosphate biosynthetic process", "id": "GO:0009229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009229", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" }, { "name": "thiamine metabolic process", "id": "GO:0006772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006772", "evidence": [ { "database": "UniProtKB", "id": "B9DGU7", "url": "https://www.uniprot.org/uniprotkb/B9DGU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DGU7-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Thr266", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGU7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MRD9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 826, "chemical_mass": 93511.0, "gene_names": "PDS5D;F23A5.16;F23A5_16;SL2", "protein_name": "Sister chromatid cohesion protein PDS5 homolog D", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" }, { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" } ], "molecular_function": [ { "name": "cohesin unloader activity", "id": "GO:0140670", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140670", "evidence": [ { "database": "UniProtKB", "id": "A8MRD9", "url": "https://www.uniprot.org/uniprotkb/A8MRD9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Thr652", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 652, "start_aa": "Thr", "end_pos": 652, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr652", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "265", "end_pos": "265", "site_lbl": "Ser265", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "375", "end_pos": "375", "site_lbl": "Ser375", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "407", "end_pos": "407", "site_lbl": "Ser407", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "418", "end_pos": "418", "site_lbl": "Ser418", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "422", "end_pos": "422", "site_lbl": "Ser422", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "426", "end_pos": "426", "site_lbl": "Ser426", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "427", "end_pos": "427", "site_lbl": "Ser427", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "530", "end_pos": "530", "site_lbl": "Ser530", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H4B3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H4B3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "534", "end_pos": "534", "site_lbl": "Thr534", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "614", "end_pos": "614", "site_lbl": "Thr614", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H4B3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H4B3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "615", "end_pos": "615", "site_lbl": "Ser615", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H4B3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H4B3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "648", "end_pos": "648", "site_lbl": "Ser648", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "654", "end_pos": "654", "site_lbl": "Ser654", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "659", "end_pos": "659", "site_lbl": "Ser659", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "660", "end_pos": "660", "site_lbl": "Ser660", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "A8MRD9-1", "start_pos": "808", "end_pos": "808", "site_lbl": "Ser808", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MRD9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MRD9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I460-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1500, "chemical_mass": 169493.0, "gene_names": "XI-B;XIB;ARABIDOPSIS THALIANA MYOSIN XI B;ATXIB;F20D22.7;F20D22_7;MYOSIN XI B;MYOSIN XI-8;XI-8;XI-B;XIB;myosin XI B", "protein_name": "Myosin-8", "disease": [], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "cytoskeletal motor activity", "id": "GO:0003774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003774", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "microfilament motor activity", "id": "GO:0000146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000146", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "myosin complex", "id": "GO:0016459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016459", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" } ], "biological_process": [ { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "actin filament-based movement", "id": "GO:0030048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030048", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" }, { "name": "root hair elongation", "id": "GO:0048767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048767", "evidence": [ { "database": "UniProtKB", "id": "F4I460", "url": "https://www.uniprot.org/uniprotkb/F4I460" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I460-1", "start_pos": "237", "end_pos": "237", "site_lbl": "Thr237", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I460", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I460" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I460-1", "start_pos": "556", "end_pos": "556", "site_lbl": "Thr556", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I460", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I460" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I460-1", "start_pos": "559", "end_pos": "559", "site_lbl": "Thr559", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I460", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I460" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I460-1", "start_pos": "749", "end_pos": "749", "site_lbl": "Tyr749", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I460", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I460" } ] } ] }, { "uniprot_canonical_ac": "F4I460-1", "start_pos": "778", "end_pos": "778", "site_lbl": "Tyr778", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I460", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I460" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I907-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 358, "chemical_mass": 37781.0, "gene_names": "GLYR2;AtGLYR2;F11A6.12;GLYOXYLATE REDUCTASE 2;GLYR2;GR2;glyoxylate reductase 2", "protein_name": "Glyoxylate/succinic semialdehyde reductase 2, chloroplastic", "disease": [], "molecular_function": [ { "name": "glyoxylate reductase (NADPH) activity", "id": "GO:0030267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030267", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" }, { "name": "NAD binding", "id": "GO:0051287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051287", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" }, { "name": "NADP binding", "id": "GO:0050661", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050661", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I907", "url": "https://www.uniprot.org/uniprotkb/F4I907" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I907-1", "start_pos": "112", "end_pos": "112", "site_lbl": "Tyr112", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I907", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I907" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HRI2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 304, "chemical_mass": 34765.0, "gene_names": "HEI10;F22G10.16;HEI10;T3F20.19;homolog of human HEI10 (Enhancer of cell Invasion No.10)", "protein_name": "E3 ubiquitin-protein ligase CCNB1IP1 homolog", "disease": [], "cellular_component": [ { "name": "chiasma", "id": "GO:0005712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005712", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" } ], "biological_process": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "reciprocal meiotic recombination", "id": "GO:0007131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007131", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "chiasma assembly", "id": "GO:0051026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051026", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" }, { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "F4HRI2", "url": "https://www.uniprot.org/uniprotkb/F4HRI2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HRI2-1", "start_pos": "224", "end_pos": "224", "site_lbl": "Thr224", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 224, "start_aa": "Thr", "end_pos": 224, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr224", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDQ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1576, "chemical_mass": 174510.0, "gene_names": "NIH;DEIH-BOX RNA/DNA HELICASE;DNA HELICASE;F12K11.4;F12K11_4;NIH;nuclear DEIH-boxhelicase", "protein_name": "DExH-box ATP-dependent RNA helicase DExH2", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "RNA helicase activity", "id": "GO:0003724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003724", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA metabolic process", "id": "GO:0006259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006259", "evidence": [ { "database": "UniProtKB", "id": "F4IDQ6", "url": "https://www.uniprot.org/uniprotkb/F4IDQ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IDQ6-1", "start_pos": "1020", "end_pos": "1020", "site_lbl": "Ser1020", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDQ6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDQ6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8ASY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1331, "chemical_mass": 147286.0, "gene_names": "EMB2411;JHS1;EMB2411;F7G19.26;emb2411;embryo defective 2411", "protein_name": "DNA replication ATP-dependent helicase/nuclease JHS1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "5'-flap endonuclease activity", "id": "GO:0017108", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017108", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "single-stranded DNA helicase activity", "id": "GO:0017116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017116", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "nuclease activity", "id": "GO:0004518", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004518", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "replication fork reversal", "id": "GO:0071932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071932", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "meristem maintenance", "id": "GO:0010073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010073", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" }, { "name": "DNA replication, Okazaki fragment processing", "id": "GO:0033567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033567", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8ASY1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8ASY1-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Ser321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ASY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ASY1" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ASY1-1", "start_pos": "326", "end_pos": "326", "site_lbl": "Ser326", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ASY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ASY1" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8ASY1-1", "start_pos": "426", "end_pos": "426", "site_lbl": "Thr426", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8ASY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8ASY1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HRJ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 609, "chemical_mass": 66447.0, "gene_names": "MAP3KA;MAPKKK3;F22G10.18;MAP KINASE KINASE KINASE 3;MAP3KA;MAPKKK3;MEK KINASE;T3F20.12;mitogen-activated protein kinase kinase kinase 3", "protein_name": "Mitogen-activated protein kinase kinase kinase 3", "disease": [], "biological_process": [ { "name": "pattern recognition receptor signaling pathway", "id": "GO:0002221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002221", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "MAPK cascade", "id": "GO:0000165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000165", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "regulation of defense response to bacterium", "id": "GO:1900424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900424", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "regulation of defense response to fungus", "id": "GO:1900150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900150", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" } ], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "MAP kinase kinase kinase activity", "id": "GO:0004709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004709", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HRJ4", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Thr460", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 460, "start_aa": "Thr", "end_pos": 460, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr460", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Ser134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Ser139", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Thr144", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Thr146", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Thr147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Thr150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Ser151", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "187", "end_pos": "187", "site_lbl": "Thr187", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Ser188", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "190", "end_pos": "190", "site_lbl": "Thr190", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "508", "end_pos": "508", "site_lbl": "Ser508", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "533", "end_pos": "533", "site_lbl": "Thr533", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "538", "end_pos": "538", "site_lbl": "Ser538", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "541", "end_pos": "541", "site_lbl": "Ser541", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "542", "end_pos": "542", "site_lbl": "Ser542", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRJ4-1", "start_pos": "602", "end_pos": "602", "site_lbl": "Ser602", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRJ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRJ4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVA6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 527, "chemical_mass": 59275.0, "gene_names": "TAF6B;F20D21.18;F20D21_18;TAF6B1;TAF6B2;TAF6B3;TAF6B4;TAF6B;TBP-ASSOCIATED FACTOR 6B1;TBP-ASSOCIATED FACTOR 6B2;TBP-ASSOCIATED FACTOR 6B3;TBP-ASSOCIATED FACTOR 6B;TBP-associated factor 6B4", "protein_name": "Transcription initiation factor TFIID subunit 6b", "disease": [], "molecular_function": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "RNA polymerase II general transcription initiation factor activity", "id": "GO:0016251", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016251", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "transcription factor TFIID complex", "id": "GO:0005669", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005669", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "SAGA complex", "id": "GO:0000124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000124", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "SLIK (SAGA-like) complex", "id": "GO:0046695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046695", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA polymerase II preinitiation complex assembly", "id": "GO:0051123", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051123", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" }, { "name": "transcription initiation at RNA polymerase II promoter", "id": "GO:0006367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006367", "evidence": [ { "database": "UniProtKB", "id": "F4HVA6", "url": "https://www.uniprot.org/uniprotkb/F4HVA6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVA6-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Ser434", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT29", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT29" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HVA6-1", "start_pos": "483", "end_pos": "483", "site_lbl": "Ser483", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AT29", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AT29" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I893-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2696, "chemical_mass": 294075.0, "gene_names": "ILA;F13O11.10;F13O11.35;F13O11_35;ILA;ILITHYIA", "protein_name": "Protein ILITYHIA", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of translation", "id": "GO:0006417", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006417", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "cellular response to amino acid starvation", "id": "GO:0034198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034198", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "induced systemic resistance", "id": "GO:0009682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009682", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" }, { "name": "systemic acquired resistance", "id": "GO:0009627", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009627", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein kinase regulator activity", "id": "GO:0019887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019887", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I893-1", "start_pos": "1330", "end_pos": "1330", "site_lbl": "Ser1330", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "1373", "end_pos": "1373", "site_lbl": "Thr1373", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "1377", "end_pos": "1377", "site_lbl": "Ser1377", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "1887", "end_pos": "1887", "site_lbl": "Ser1887", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4I893", "url": "https://www.uniprot.org/uniprotkb/F4I893" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "2118", "end_pos": "2118", "site_lbl": "Ser2118", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "2138", "end_pos": "2138", "site_lbl": "Thr2138", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "2684", "end_pos": "2684", "site_lbl": "Ser2684", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "2687", "end_pos": "2687", "site_lbl": "Ser2687", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "2689", "end_pos": "2689", "site_lbl": "Ser2689", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4I893-1", "start_pos": "753", "end_pos": "753", "site_lbl": "Ser753", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I893", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I893" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I3V6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 192, "chemical_mass": 21367.0, "gene_names": "SHW1;SHORT HYPOCOTYL IN WHITE LIGHT1;SHW1;T17F3", "protein_name": "Protein SHORT HYPOCOTYL IN WHITE LIGHT 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" } ], "biological_process": [ { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "response to light intensity", "id": "GO:0009642", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009642", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "regulation of abscisic acid-activated signaling pathway", "id": "GO:0009787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009787", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "positive gravitropism", "id": "GO:0009958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009958", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "negative regulation of photomorphogenesis", "id": "GO:0010100", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010100", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "regulation of chlorophyll biosynthetic process", "id": "GO:0010380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010380", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "regulation of anthocyanin biosynthetic process", "id": "GO:0031540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031540", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "positive regulation of long-day photoperiodism, flowering", "id": "GO:0048578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048578", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "regulation of red or far-red light signaling pathway", "id": "GO:0090227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090227", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" }, { "name": "positive regulation of lateral root development", "id": "GO:1901333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901333", "evidence": [ { "database": "UniProtKB", "id": "F4I3V6", "url": "https://www.uniprot.org/uniprotkb/F4I3V6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I3V6-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Ser23", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I3V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I3V6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4I3V6-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Thr5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I3V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I3V6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I3V6-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Thr7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I3V6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I3V6" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I313-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 913, "chemical_mass": 100056.0, "gene_names": "SCYL2A;F19G10.17;F19G10_17", "protein_name": "SCY1-like protein 2 A", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" }, { "name": "trans-Golgi network membrane", "id": "GO:0032588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032588", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" }, { "name": "late endosome membrane", "id": "GO:0031902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031902", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" }, { "name": "clathrin heavy chain binding", "id": "GO:0032050", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032050", "evidence": [ { "database": "UniProtKB", "id": "F4I313", "url": "https://www.uniprot.org/uniprotkb/F4I313" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I313-1", "start_pos": "717", "end_pos": "717", "site_lbl": "Ser717", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I313", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I313" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 5400, "chemical_mass": 611889.0, "gene_names": "MDN1;AtMDN1;DSR1;F5A8.11;F5A8_11;MDN1;MIDASIN 1", "protein_name": "Midasin", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of developmental growth", "id": "GO:0048638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048638", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "ribosomal large subunit assembly", "id": "GO:0000027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000027", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "1081", "end_pos": "1081", "site_lbl": "Thr1081", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1081, "start_aa": "Thr", "end_pos": 1081, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1081", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "1266", "end_pos": "1266", "site_lbl": "Thr1266", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1266, "start_aa": "Thr", "end_pos": 1266, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1266", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "3071", "end_pos": "3071", "site_lbl": "Thr3071", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "3073", "end_pos": "3073", "site_lbl": "Thr3073", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Thr323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "3710", "end_pos": "3710", "site_lbl": "Ser3710", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "4603", "end_pos": "4603", "site_lbl": "Ser4603", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "4737", "end_pos": "4737", "site_lbl": "Thr4737", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "4804", "end_pos": "4804", "site_lbl": "Ser4804", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "5000", "end_pos": "5000", "site_lbl": "Ser5000", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "5013", "end_pos": "5013", "site_lbl": "Ser5013", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "5055", "end_pos": "5055", "site_lbl": "Ser5055", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "5095", "end_pos": "5095", "site_lbl": "Ser5095", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "909", "end_pos": "909", "site_lbl": "Ser909", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AUY4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AUY4" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AUY4-1", "start_pos": "3845", "end_pos": "3845", "site_lbl": "Glu3845", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "K", "comment": "In dsr1; pleiotropic developmental phenotypes including slow germination, short root, dwarf shoot, and reduced seed set under normal growth conditions. Impaired expression of genes related to plant growth and development.", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AUY4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AUY4" }, { "database": "PubMed", "id": "27824150", "url": "https://glygen.org/publication/PubMed/27824150" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGG6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 876, "chemical_mass": 98563.0, "gene_names": "T14L22.10;T14L22_10", "protein_name": "Probable LRR receptor-like protein kinase At1g51890", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Asn138", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 138, "start_aa": "Asn", "end_pos": 138, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn138", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "177", "end_pos": "177", "site_lbl": "Asn177", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 177, "start_aa": "Asn", "end_pos": 177, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn177", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Thr198", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 198, "start_aa": "Thr", "end_pos": 198, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr198", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "251", "end_pos": "251", "site_lbl": "Asn251", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 251, "start_aa": "Asn", "end_pos": 251, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn251", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "259", "end_pos": "259", "site_lbl": "Asn259", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 259, "start_aa": "Asn", "end_pos": 259, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn259", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "284", "end_pos": "284", "site_lbl": "Asn284", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 284, "start_aa": "Asn", "end_pos": 284, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn284", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "290", "end_pos": "290", "site_lbl": "Asn290", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 290, "start_aa": "Asn", "end_pos": 290, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn290", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "327", "end_pos": "327", "site_lbl": "Asn327", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 327, "start_aa": "Asn", "end_pos": 327, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn327", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Asn335", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 335, "start_aa": "Asn", "end_pos": 335, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn335", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "397", "end_pos": "397", "site_lbl": "Asn397", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 397, "start_aa": "Asn", "end_pos": 397, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn397", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "412", "end_pos": "412", "site_lbl": "Asn412", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 412, "start_aa": "Asn", "end_pos": 412, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn412", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Asn417", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 417, "start_aa": "Asn", "end_pos": 417, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn417", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Asn455", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 455, "start_aa": "Asn", "end_pos": 455, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn455", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "45", "end_pos": "45", "site_lbl": "Asn45", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 45, "start_aa": "Asn", "end_pos": 45, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn45", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Asn460", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 460, "start_aa": "Asn", "end_pos": 460, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn460", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Asn468", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 468, "start_aa": "Asn", "end_pos": 468, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn468", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "481", "end_pos": "481", "site_lbl": "Asn481", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 481, "start_aa": "Asn", "end_pos": 481, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn481", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "494", "end_pos": "494", "site_lbl": "Asn494", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 494, "start_aa": "Asn", "end_pos": 494, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn494", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "734", "end_pos": "734", "site_lbl": "Thr734", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 734, "start_aa": "Thr", "end_pos": 734, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr734", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "90", "end_pos": "90", "site_lbl": "Asn90", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 90, "start_aa": "Asn", "end_pos": 90, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn90", "evidence": [ { "id": "C0LGG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "550", "end_pos": "550", "site_lbl": "Ser550", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "561", "end_pos": "561", "site_lbl": "Thr561", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "642", "end_pos": "642", "site_lbl": "Tyr642", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "729", "end_pos": "729", "site_lbl": "Thr729", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "742", "end_pos": "742", "site_lbl": "Tyr742", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG6", "url": "https://www.uniprot.org/uniprotkb/C0LGG6" } ] } ] }, { "uniprot_canonical_ac": "C0LGG6-1", "start_pos": "864", "end_pos": "864", "site_lbl": "Ser864", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I096-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1921, "chemical_mass": 208462.0, "gene_names": "GCT;MED13;CCT;CENTER CITY;F7A10.14;GCT;GRAND CENTRAL;MAB2;MACCHI-BOU 2;MED13_1", "protein_name": "Mediator of RNA polymerase II transcription subunit 13", "disease": [], "biological_process": [ { "name": "regulation of development, heterochronic", "id": "GO:0040034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040034", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "regulation of radial pattern formation", "id": "GO:0090213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090213", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I096-1", "start_pos": "665", "end_pos": "665", "site_lbl": "Thr665", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 665, "start_aa": "Thr", "end_pos": 665, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr665", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4I096-1", "start_pos": "407", "end_pos": "407", "site_lbl": "Ser407", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "N", "comment": "In gct-3; uncoupled cell division, pattern formation and morphogenesis during embryogenesis.", "evidence": [ { "database": "UniProtKB", "id": "F4I096", "url": "https://www.uniprot.org/uniprotkb/F4I096" }, { "database": "PubMed", "id": "20023166", "url": "https://glygen.org/publication/PubMed/20023166" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDI6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 358, "chemical_mass": 40085.0, "gene_names": "BRG2;BOI-related gene 2;BRG2;YUP8H12R.27;YUP8H12R_27", "protein_name": "Probable BOI-related E3 ubiquitin-protein ligase 2", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" }, { "name": "regulation of programmed cell death", "id": "GO:0043067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043067", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "F4IDI6", "url": "https://www.uniprot.org/uniprotkb/F4IDI6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A4FVP6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 564, "chemical_mass": 63407.0, "gene_names": "NAC016;F23M19.14;F23M19_14;NAC domain containing protein 16;NAC016;NTL3;anac016", "protein_name": "NAC domain-containing protein 16", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" }, { "name": "positive regulation of leaf senescence", "id": "GO:1900057", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900057", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A4FVP6", "url": "https://www.uniprot.org/uniprotkb/A4FVP6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A4FVP6-1", "start_pos": "489", "end_pos": "489", "site_lbl": "Thr489", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 489, "start_aa": "Thr", "end_pos": 489, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr489", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A4FVP6-1", "start_pos": "509", "end_pos": "509", "site_lbl": "Ser509", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4FVP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4FVP6" } ] } ] }, { "uniprot_canonical_ac": "A4FVP6-1", "start_pos": "554", "end_pos": "554", "site_lbl": "Thr554", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4FVP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4FVP6" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IED2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 528, "chemical_mass": 59322.0, "gene_names": "NAC013;NAC13;ANAC013;ANAC13;F9L11.7;F9L11_7;NAC domain protein 13;NTL1", "protein_name": "NAC domain-containing protein 13", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "mitochondria-nucleus signaling pathway", "id": "GO:0031930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031930", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "response to UV-B", "id": "GO:0010224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010224", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "response to red light", "id": "GO:0010114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010114", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "positive regulation of cellular response to oxidative stress", "id": "GO:1900409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900409", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IED2", "url": "https://www.uniprot.org/uniprotkb/F4IED2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1019, "chemical_mass": 112385.0, "gene_names": "KTN80.1;KTN801;T28P6.17;T28P6_17", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1", "disease": [], "biological_process": [ { "name": "microtubule severing", "id": "GO:0051013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051013", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "microtubule depolymerization", "id": "GO:0007019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007019", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "regulation of unidimensional cell growth", "id": "GO:0051510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051510", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" } ], "cellular_component": [ { "name": "katanin complex", "id": "GO:0008352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008352", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" }, { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8AW69", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AW69" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0A1P8AW69-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Ser337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AW69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AW69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AW69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AW69" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Ser402", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AW69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AW69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Ser404", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AW69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AW69" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "start_pos": "409", "end_pos": "409", "site_lbl": "Ser409", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8AW69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8AW69" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "D7SFH9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1118, "chemical_mass": 123825.0, "gene_names": "LRK10L-2.6;SNC4;F1O19.6;F1O19_6;GDPDL2;Glycerophosphodiester phosphodiesterase (GDPD) like 2;SNC4;suppressor of npr1-1 constitutive 4", "protein_name": "Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "glycerophosphodiester phosphodiesterase activity", "id": "GO:0008889", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008889", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "cellular defense response", "id": "GO:0006968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006968", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" }, { "name": "glycerol metabolic process", "id": "GO:0006071", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006071", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "106", "end_pos": "106", "site_lbl": "Asn106", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 106, "start_aa": "Asn", "end_pos": 106, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn106", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Asn195", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 195, "start_aa": "Asn", "end_pos": 195, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn195", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "251", "end_pos": "251", "site_lbl": "Asn251", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 251, "start_aa": "Asn", "end_pos": 251, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn251", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "260", "end_pos": "260", "site_lbl": "Asn260", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 260, "start_aa": "Asn", "end_pos": 260, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn260", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "318", "end_pos": "318", "site_lbl": "Asn318", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 318, "start_aa": "Asn", "end_pos": 318, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn318", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Asn335", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 335, "start_aa": "Asn", "end_pos": 335, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn335", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "362", "end_pos": "362", "site_lbl": "Asn362", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 362, "start_aa": "Asn", "end_pos": 362, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn362", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "422", "end_pos": "422", "site_lbl": "Asn422", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 422, "start_aa": "Asn", "end_pos": 422, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn422", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Asn433", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 433, "start_aa": "Asn", "end_pos": 433, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn433", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "497", "end_pos": "497", "site_lbl": "Asn497", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 497, "start_aa": "Asn", "end_pos": 497, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn497", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Asn557", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 557, "start_aa": "Asn", "end_pos": 557, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn557", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "573", "end_pos": "573", "site_lbl": "Asn573", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 573, "start_aa": "Asn", "end_pos": 573, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn573", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "656", "end_pos": "656", "site_lbl": "Asn656", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 656, "start_aa": "Asn", "end_pos": 656, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn656", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "1035", "end_pos": "1035", "site_lbl": "Ser1035", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "D7SFH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/D7SFH9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "1045", "end_pos": "1045", "site_lbl": "Ser1045", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "D7SFH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/D7SFH9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "D7SFH9-1", "start_pos": "850", "end_pos": "850", "site_lbl": "Ala850", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "T", "comment": "In snc4-1D; dwarf phenotype, constitutive expression of defense genes and enhanced disease resistance.", "evidence": [ { "database": "UniProtKB", "id": "D7SFH9", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVS0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1259, "chemical_mass": 144923.0, "gene_names": "BTSL1;F25A4.26;F25A4.27;F25A4_26", "protein_name": "Zinc finger protein BRUTUS-like At1g74770", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular iron ion homeostasis", "id": "GO:0006879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006879", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "iron ion import across plasma membrane", "id": "GO:0098711", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098711", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "regulation of iron ion transport", "id": "GO:0034756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034756", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" }, { "name": "iron import into cell", "id": "GO:0033212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033212", "evidence": [ { "database": "UniProtKB", "id": "F4HVS0", "url": "https://www.uniprot.org/uniprotkb/F4HVS0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVS0-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Thr23", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 23, "start_aa": "Thr", "end_pos": 23, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr23", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HVS0-1", "start_pos": "930", "end_pos": "930", "site_lbl": "Thr930", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVS0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVS0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MS41-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 417, "chemical_mass": 47085.0, "gene_names": "CCR4-4;HESP;F27M3.27;F27M3_27;HESP;T8E3.7", "protein_name": "Carbon catabolite repressor protein 4 homolog 4", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "regulation of circadian rhythm", "id": "GO:0042752", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042752", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "rhythmic process", "id": "GO:0048511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048511", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA poly(A) tail shortening", "id": "GO:0000289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000289", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "RNA exonuclease activity", "id": "GO:0004532", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004532", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "poly(A)-specific ribonuclease activity", "id": "GO:0004535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004535", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" }, { "name": "catalytic activity", "id": "GO:0003824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003824", "evidence": [ { "database": "UniProtKB", "id": "A8MS41", "url": "https://www.uniprot.org/uniprotkb/A8MS41" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGJ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 742, "chemical_mass": 82002.0, "gene_names": "T20F6.8;T20F6_8", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g02780", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" }, { "name": "protein tyrosine kinase activity", "id": "GO:0004713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004713", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ9", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGJ9-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Asn137", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 137, "start_aa": "Asn", "end_pos": 137, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn137", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ9-1", "start_pos": "209", "end_pos": "209", "site_lbl": "Asn209", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 209, "start_aa": "Asn", "end_pos": 209, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn209", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ9-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Asn266", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 266, "start_aa": "Asn", "end_pos": 266, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn266", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ9-1", "start_pos": "299", "end_pos": "299", "site_lbl": "Asn299", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 299, "start_aa": "Asn", "end_pos": 299, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn299", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ9-1", "start_pos": "85", "end_pos": "85", "site_lbl": "Asn85", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 85, "start_aa": "Asn", "end_pos": 85, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn85", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IS91-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1340, "chemical_mass": 150913.0, "gene_names": "RSA1;RSA1;SHORT ROOT IN SALT MEDIUM 1;T18E12.18;T18E12_18;emb1579;embryo defective 1579", "protein_name": "Protein SHORT ROOT IN SALT MEDIUM 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" }, { "name": "sodium ion homeostasis", "id": "GO:0055078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055078", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "132", "end_pos": "132", "site_lbl": "Ser132", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 132, "start_aa": "Ser", "end_pos": 132, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser132", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Ser134", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 134, "start_aa": "Ser", "end_pos": 134, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser134", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "135", "end_pos": "135", "site_lbl": "Ser135", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 135, "start_aa": "Ser", "end_pos": 135, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser135", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Ser165", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 165, "start_aa": "Ser", "end_pos": 165, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser165", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "263", "end_pos": "263", "site_lbl": "Thr263", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 263, "start_aa": "Thr", "end_pos": 263, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr263", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "264", "end_pos": "264", "site_lbl": "Ser264", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 264, "start_aa": "Ser", "end_pos": 264, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser264", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "265", "end_pos": "265", "site_lbl": "Ser265", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 265, "start_aa": "Ser", "end_pos": 265, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser265", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "55", "end_pos": "55", "site_lbl": "Ser55", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 55, "start_aa": "Ser", "end_pos": 55, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser55", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Thr57", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 57, "start_aa": "Thr", "end_pos": 57, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr57", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IS91", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IS91" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "122", "end_pos": "122", "site_lbl": "Ser122", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "1261", "end_pos": "1261", "site_lbl": "Thr1261", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "1262", "end_pos": "1262", "site_lbl": "Ser1262", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Ser127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "130", "end_pos": "130", "site_lbl": "Tyr130", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Tyr138", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "473", "end_pos": "473", "site_lbl": "Ser473", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "474", "end_pos": "474", "site_lbl": "Ser474", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "734", "end_pos": "734", "site_lbl": "Ser734", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "738", "end_pos": "738", "site_lbl": "Thr738", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "739", "end_pos": "739", "site_lbl": "Ser739", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "741", "end_pos": "741", "site_lbl": "Thr741", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "743", "end_pos": "743", "site_lbl": "Thr743", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "746", "end_pos": "746", "site_lbl": "Thr746", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "793", "end_pos": "793", "site_lbl": "Ser793", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "812", "end_pos": "812", "site_lbl": "Thr812", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "906", "end_pos": "906", "site_lbl": "Ser906", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "941", "end_pos": "941", "site_lbl": "Ser941", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS91" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS91-1", "start_pos": "685", "end_pos": "685", "site_lbl": "Pro685", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In rsa1-1; hypersensitivity to salt (NaCl) stress.", "evidence": [ { "database": "UniProtKB", "id": "F4IS91", "url": "https://www.uniprot.org/uniprotkb/F4IS91" }, { "database": "PubMed", "id": "24009530", "url": "https://glygen.org/publication/PubMed/24009530" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IIS5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1042, "chemical_mass": 116223.0, "gene_names": "KIN5A;RSW7;LPH;RSW7;T8O18.9;T8O18_9", "protein_name": "Kinesin-like protein KIN-5A", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "plus-end-directed microtubule motor activity", "id": "GO:0008574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008574", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" } ], "cellular_component": [ { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "spindle microtubule", "id": "GO:0005876", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005876", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "mitotic spindle", "id": "GO:0072686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072686", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" } ], "biological_process": [ { "name": "mitotic spindle assembly", "id": "GO:0090307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090307", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "mitotic cytokinesis", "id": "GO:0000281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000281", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "microtubule-based movement", "id": "GO:0007018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007018", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "mitotic spindle organization", "id": "GO:0007052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007052", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "unidimensional cell growth", "id": "GO:0009826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009826", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "cortical microtubule organization", "id": "GO:0043622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043622", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "spindle elongation", "id": "GO:0051231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051231", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "cytokinesis by cell plate formation", "id": "GO:0000911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000911", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" }, { "name": "cytoskeleton organization", "id": "GO:0007010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007010", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IIS5-1", "start_pos": "280", "end_pos": "280", "site_lbl": "Glu280", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "K", "comment": "In rsw7-1: Disorganized cortical microtubules during interphase and massive disrupted mitotic spindles.", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" }, { "database": "PubMed", "id": "17652157", "url": "https://glygen.org/publication/PubMed/17652157" } ] } ] }, { "uniprot_canonical_ac": "F4IIS5-1", "start_pos": "359", "end_pos": "359", "site_lbl": "Gly359", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In rsw7-lph: Short and swollen seedlings. No functional apical meristems and only rudimentary cotyledons. Cellular abnormalities like cell wall stubs or incomplete, gapped cell walls. Affected mitosis in the male gametophyte.", "evidence": [ { "database": "UniProtKB", "id": "F4IIS5", "url": "https://www.uniprot.org/uniprotkb/F4IIS5" }, { "database": "PubMed", "id": "26745275", "url": "https://glygen.org/publication/PubMed/26745275" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "E5KGE0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 488, "chemical_mass": 55215.0, "gene_names": "BRIZ1;BRAP2 RING ZnF UBP domain-containing protein 1;BRIZ1;RING-HCa;T24P15.7;T24P15_7", "protein_name": "BRAP2 RING ZnF UBP domain-containing protein 1", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "ubiquitin ligase complex", "id": "GO:0000151", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000151", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" } ], "biological_process": [ { "name": "Ras protein signal transduction", "id": "GO:0007265", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007265", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" }, { "name": "regulation of seed germination", "id": "GO:0010029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010029", "evidence": [ { "database": "UniProtKB", "id": "E5KGE0", "url": "https://www.uniprot.org/uniprotkb/E5KGE0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "E5KGE0-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Ser471", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "E5KGE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/E5KGE0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ISL7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2166, "chemical_mass": 240344.0, "gene_names": "EMB2410;TIC236;EMB2410;F3N11.11;F3N11_11;emb2410;embryo defective 2410", "protein_name": "Protein TIC236, chloroplastic", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "pmid": "" }, { "name": "chloroplast intermembrane space", "id": "GO:0031972", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031972", "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "pmid": "" } ], "biological_process": [ { "name": "protein secretion", "id": "GO:0009306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009306", "evidence": [ { "database": "UniProtKB", "id": "F4ISL7", "url": "https://www.uniprot.org/uniprotkb/F4ISL7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4ISL7-1", "start_pos": "1184", "end_pos": "1184", "site_lbl": "Ser1184", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ISL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ISL7" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4ISL7-1", "start_pos": "145", "end_pos": "145", "site_lbl": "Ser145", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ISL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ISL7" } ] } ] }, { "uniprot_canonical_ac": "F4ISL7-1", "start_pos": "1529", "end_pos": "1529", "site_lbl": "Ser1529", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ISL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ISL7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4ISL7-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Ser467", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ISL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ISL7" } ] } ] }, { "uniprot_canonical_ac": "F4ISL7-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Thr468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ISL7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ISL7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ITL6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 250, "chemical_mass": 27932.0, "gene_names": "RTE1;AtRTE1;REVERSION-TO-ETHYLENE SENSITIVITY1;RTE1;T19L18.12;T19L18_12", "protein_name": "Protein REVERSION-TO-ETHYLENE SENSITIVITY1", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" } ], "biological_process": [ { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "regulation of ethylene-activated signaling pathway", "id": "GO:0010104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010104", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" }, { "name": "negative regulation of ethylene-activated signaling pathway", "id": "GO:0010105", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010105", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4ITL6-1", "start_pos": "161", "end_pos": "161", "site_lbl": "Cys161", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "Enhances ethylene sensitivity. Reduces ETR1 binding efficiency.", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" }, { "database": "PubMed", "id": "16682642", "url": "https://glygen.org/publication/PubMed/16682642" }, { "database": "PubMed", "id": "20952388", "url": "https://glygen.org/publication/PubMed/20952388" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IIU4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1708, "chemical_mass": 186862.0, "gene_names": "AIR9;AIR9;AUXIN-INDUCED IN ROOT CULTURES 9;T29F13.11;T29F13_11;T29F13", "protein_name": "187-kDa microtubule-associated protein AIR9", "disease": [], "cellular_component": [ { "name": "cortical microtubule", "id": "GO:0055028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055028", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "preprophase band", "id": "GO:0009574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009574", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" } ], "biological_process": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" }, { "name": "lateral root morphogenesis", "id": "GO:0010102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010102", "evidence": [ { "database": "UniProtKB", "id": "F4IIU4", "url": "https://www.uniprot.org/uniprotkb/F4IIU4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "623", "end_pos": "623", "site_lbl": "Thr623", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 623, "start_aa": "Thr", "end_pos": 623, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr623", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Thr64", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 64, "start_aa": "Thr", "end_pos": 64, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr64", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "107", "end_pos": "107", "site_lbl": "Ser107", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Ser147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Ser156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Ser160", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "177", "end_pos": "177", "site_lbl": "Ser177", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "189", "end_pos": "189", "site_lbl": "Ser189", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "212", "end_pos": "212", "site_lbl": "Ser212", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "213", "end_pos": "213", "site_lbl": "Ser213", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "215", "end_pos": "215", "site_lbl": "Ser215", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Ser218", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "223", "end_pos": "223", "site_lbl": "Ser223", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "230", "end_pos": "230", "site_lbl": "Ser230", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "232", "end_pos": "232", "site_lbl": "Ser232", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "233", "end_pos": "233", "site_lbl": "Ser233", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Thr26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "31", "end_pos": "31", "site_lbl": "Ser31", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Ser322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "36", "end_pos": "36", "site_lbl": "Ser36", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "38", "end_pos": "38", "site_lbl": "Ser38", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Ser41", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "49", "end_pos": "49", "site_lbl": "Ser49", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIU4-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Ser57", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIU4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIU4" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IH25-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 753, "chemical_mass": 85383.0, "gene_names": "ATPEP1;BOP1;PEIP1;T3G21.13;T3G21_13", "protein_name": "Ribosome biogenesis protein BOP1 homolog", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "preribosome, large subunit precursor", "id": "GO:0030687", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030687", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "PeBoW complex", "id": "GO:0070545", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070545", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" } ], "molecular_function": [ { "name": "ribonucleoprotein complex binding", "id": "GO:0043021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043021", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" } ], "biological_process": [ { "name": "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000463", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "gamete generation", "id": "GO:0007276", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007276", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" }, { "name": "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000466", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000466", "evidence": [ { "database": "UniProtKB", "id": "F4IH25", "url": "https://www.uniprot.org/uniprotkb/F4IH25" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IS56-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 479, "chemical_mass": 54415.0, "gene_names": "ILK1;APK1;F18O19.4", "protein_name": "Integrin-linked protein kinase 1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "protein serine/threonine/tyrosine kinase activity", "id": "GO:0004712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004712", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "cytoplasmic side of plasma membrane", "id": "GO:0009898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009898", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" }, { "name": "integrin-mediated signaling pathway", "id": "GO:0007229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007229", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "17", "end_pos": "17", "site_lbl": "Ser17", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" }, { "database": "PubMed", "id": "27208244", "url": "https://glygen.org/publication/PubMed/27208244" }, { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Ser20", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Ser26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" }, { "database": "PubMed", "id": "27208244", "url": "https://glygen.org/publication/PubMed/27208244" }, { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "30", "end_pos": "30", "site_lbl": "Thr30", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "34", "end_pos": "34", "site_lbl": "Ser34", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "50", "end_pos": "50", "site_lbl": "Ser50", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "51", "end_pos": "51", "site_lbl": "Ser51", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IS56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IS56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "222", "end_pos": "222", "site_lbl": "Lys222", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Decreases kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" }, { "database": "PubMed", "id": "27208244", "url": "https://glygen.org/publication/PubMed/27208244" } ] } ] }, { "uniprot_canonical_ac": "F4IS56-1", "start_pos": "319", "end_pos": "319", "site_lbl": "Asp319", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "Increases kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4IS56", "url": "https://www.uniprot.org/uniprotkb/F4IS56" }, { "database": "PubMed", "id": "27208244", "url": "https://glygen.org/publication/PubMed/27208244" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IHS9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 342, "chemical_mass": 37444.0, "gene_names": "LOG1;UXT1;ATLOG1;LONELY GUY 1;T1B3.18", "protein_name": "UDP-xylose transporter 1", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" } ], "biological_process": [ { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "UDP-xylose transmembrane transport", "id": "GO:0015790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015790", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "plant-type secondary cell wall biogenesis", "id": "GO:0009834", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009834", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "regulation of pectin biosynthetic process", "id": "GO:1900030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900030", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "cytokinin biosynthetic process", "id": "GO:0009691", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009691", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" } ], "molecular_function": [ { "name": "antiporter activity", "id": "GO:0015297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015297", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "UDP-xylose transmembrane transporter activity", "id": "GO:0005464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005464", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" }, { "name": "cytokinin riboside 5'-monophosphate phosphoribohydrolase activity", "id": "GO:0102682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102682", "evidence": [ { "database": "UniProtKB", "id": "F4IHS9", "url": "https://www.uniprot.org/uniprotkb/F4IHS9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C5H8J1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 551, "chemical_mass": 62193.0, "gene_names": "EME1B;ATEME1B;EME1B;T26C19.20;T26C19_20;essential meiotic endonuclease 1B", "protein_name": "Crossover junction endonuclease EME1B", "disease": [], "biological_process": [ { "name": "resolution of meiotic recombination intermediates", "id": "GO:0000712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000712", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "double-strand break repair", "id": "GO:0006302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006302", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "mitotic intra-S DNA damage checkpoint signaling", "id": "GO:0031573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031573", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "replication fork processing", "id": "GO:0031297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031297", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" }, { "name": "Holliday junction resolvase complex", "id": "GO:0048476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048476", "evidence": [ { "database": "UniProtKB", "id": "C5H8J1", "url": "https://www.uniprot.org/uniprotkb/C5H8J1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C5H8J1-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Ser127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C5H8J1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C5H8J1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C5H8J1-1", "start_pos": "130", "end_pos": "130", "site_lbl": "Tyr130", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C5H8J1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C5H8J1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C5H8J1-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Tyr131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C5H8J1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C5H8J1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IFN6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2138, "chemical_mass": 244993.0, "gene_names": "POL2B;TIL2;POL2B;T20P8.17;T20P8_17;TIL2;TILTED 2", "protein_name": "DNA polymerase epsilon catalytic subunit B", "disease": [], "molecular_function": [ { "name": "DNA-directed DNA polymerase activity", "id": "GO:0003887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003887", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "single-stranded DNA 3'-5' DNA exonuclease activity", "id": "GO:0008310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008310", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "nucleotide binding", "id": "GO:0000166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000166", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" } ], "cellular_component": [ { "name": "epsilon DNA polymerase complex", "id": "GO:0008622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008622", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" } ], "biological_process": [ { "name": "leading strand elongation", "id": "GO:0006272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006272", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "nucleotide-excision repair, DNA gap filling", "id": "GO:0006297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006297", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "base-excision repair, gap-filling", "id": "GO:0006287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006287", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "DNA replication proofreading", "id": "GO:0045004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045004", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "F4IFN6", "url": "https://www.uniprot.org/uniprotkb/F4IFN6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IFN6-1", "start_pos": "1000", "end_pos": "1000", "site_lbl": "Ser1000", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IFN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IFN6" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IFN6-1", "start_pos": "1404", "end_pos": "1404", "site_lbl": "Thr1404", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IFN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IFN6" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IFN6-1", "start_pos": "1989", "end_pos": "1989", "site_lbl": "Tyr1989", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IFN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IFN6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IRB4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 484, "chemical_mass": 54508.0, "gene_names": "MYB88;AtMYB88;MYB88;T20F6.4;T20F6_4;myb domain protein 88", "protein_name": "Transcription factor MYB88", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "multicellular organismal-level water homeostasis", "id": "GO:0050891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050891", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "regulation of cell cycle G1/S phase transition", "id": "GO:1902806", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902806", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "regulation of DNA endoreduplication", "id": "GO:0032875", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032875", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "response to gravity", "id": "GO:0009629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009629", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "megasporogenesis", "id": "GO:0009554", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009554", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "guard cell differentiation", "id": "GO:0010052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010052", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "guard mother cell cytokinesis", "id": "GO:0010235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010235", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "stomatal complex formation", "id": "GO:0010376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010376", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "guard mother cell differentiation", "id": "GO:0010444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010444", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "positive regulation of response to salt stress", "id": "GO:1901002", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901002", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "positive regulation of lateral root development", "id": "GO:1901333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901333", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "positive regulation of response to water deprivation", "id": "GO:1902584", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902584", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "regulation of stomatal complex patterning", "id": "GO:2000037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000037", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4IRB4", "url": "https://www.uniprot.org/uniprotkb/F4IRB4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IN23-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 321, "chemical_mass": 35806.0, "gene_names": "BZIP34;ATBZIP34;BZIP34;MHK10.10;MHK10_10", "protein_name": "Basic leucine zipper 34", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IN23-1", "start_pos": "119", "end_pos": "119", "site_lbl": "Thr119", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 119, "start_aa": "Thr", "end_pos": 119, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr119", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IN23-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Thr127", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 127, "start_aa": "Thr", "end_pos": 127, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr127", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IN23-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Thr303", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 303, "start_aa": "Thr", "end_pos": 303, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr303", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IN23-1", "start_pos": "230", "end_pos": "230", "site_lbl": "Pro230", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "A", "comment": "Homodimerization and binding to G-box element.", "evidence": [ { "database": "UniProtKB", "id": "F4IN23", "url": "https://www.uniprot.org/uniprotkb/F4IN23" }, { "database": "PubMed", "id": "17719007", "url": "https://glygen.org/publication/PubMed/17719007" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A7UL74-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 345, "chemical_mass": 38988.0, "gene_names": "CTF7;AtCTF7;CHROMOSOME TRANSMISSION FIDELITY 7;CTF7;ECO1;F3L17.7", "protein_name": "Protein CHROMOSOME TRANSMISSION FIDELITY 7", "disease": [], "molecular_function": [ { "name": "protein-lysine-acetyltransferase activity", "id": "GO:0061733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061733", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "acetyltransferase activity", "id": "GO:0016407", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016407", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "acyltransferase activity", "id": "GO:0016746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016746", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "double-strand break repair via homologous recombination", "id": "GO:0000724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000724", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "meiotic chromosome segregation", "id": "GO:0045132", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045132", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "mitotic sister chromatid segregation", "id": "GO:0000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000070", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "sister chromatid cohesion", "id": "GO:0007062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007062", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "meiotic sister chromatid cohesion", "id": "GO:0051177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051177", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "establishment of meiotic sister chromatid cohesion", "id": "GO:0034089", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034089", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "developmental vegetative growth", "id": "GO:0080186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080186", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" }, { "name": "leaf phyllotactic patterning", "id": "GO:0060772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060772", "evidence": [ { "database": "UniProtKB", "id": "A7UL74", "url": "https://www.uniprot.org/uniprotkb/A7UL74" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A7UL74-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Ser196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A7UL74", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A7UL74" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JJL0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 299, "chemical_mass": 34204.0, "gene_names": "ENDO4;ENDO4;F18E5;endonuclease 4", "protein_name": "Endonuclease 4", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" }, { "name": "single-stranded DNA endodeoxyribonuclease activity", "id": "GO:0000014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000014", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA catabolic process", "id": "GO:0006308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006308", "evidence": [ { "database": "UniProtKB", "id": "F4JJL0", "url": "https://www.uniprot.org/uniprotkb/F4JJL0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "118", "end_pos": "118", "site_lbl": "Asn118", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 118, "start_aa": "Asn", "end_pos": 118, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn118", "evidence": [ { "id": "F4JJL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL0#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Asn137", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 137, "start_aa": "Asn", "end_pos": 137, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn137", "evidence": [ { "id": "F4JJL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL0#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Asn198", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 198, "start_aa": "Asn", "end_pos": 198, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn198", "evidence": [ { "id": "F4JJL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL0#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Asn211", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 211, "start_aa": "Asn", "end_pos": 211, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn211", "evidence": [ { "id": "F4JJL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL0#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "229", "end_pos": "229", "site_lbl": "Asn229", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 229, "start_aa": "Asn", "end_pos": 229, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn229", "evidence": [ { "id": "F4JJL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL0#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL0-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Thr254", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 254, "start_aa": "Thr", "end_pos": 254, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr254", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGQ7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 898, "chemical_mass": 100692.0, "gene_names": "F9F13.100;F9F13_100", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g20450", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "247", "end_pos": "247", "site_lbl": "Asn247", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 247, "start_aa": "Asn", "end_pos": 247, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn247", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Asn253", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 253, "start_aa": "Asn", "end_pos": 253, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn253", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Asn40", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 40, "start_aa": "Asn", "end_pos": 40, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn40", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "420", "end_pos": "420", "site_lbl": "Asn420", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 420, "start_aa": "Asn", "end_pos": 420, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn420", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "443", "end_pos": "443", "site_lbl": "Asn443", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 443, "start_aa": "Asn", "end_pos": 443, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn443", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Asn465", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 465, "start_aa": "Asn", "end_pos": 465, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn465", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "484", "end_pos": "484", "site_lbl": "Asn484", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 484, "start_aa": "Asn", "end_pos": 484, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn484", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "489", "end_pos": "489", "site_lbl": "Asn489", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 489, "start_aa": "Asn", "end_pos": 489, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn489", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Asn52", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 52, "start_aa": "Asn", "end_pos": 52, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn52", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "98", "end_pos": "98", "site_lbl": "Asn98", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 98, "start_aa": "Asn", "end_pos": 98, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn98", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "582", "end_pos": "582", "site_lbl": "Thr582", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "664", "end_pos": "664", "site_lbl": "Tyr664", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "750", "end_pos": "750", "site_lbl": "Ser750", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "751", "end_pos": "751", "site_lbl": "Thr751", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "764", "end_pos": "764", "site_lbl": "Tyr764", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ7", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "886", "end_pos": "886", "site_lbl": "Ser886", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "887", "end_pos": "887", "site_lbl": "Thr887", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ7" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ7-1", "start_pos": "888", "end_pos": "888", "site_lbl": "Ser888", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGQ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A2RVK7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 256, "chemical_mass": 27448.0, "gene_names": "RRP41L;F27G19.90;F27G19_90;RRP41 like;RRP41L;SLG", "protein_name": "Exosome complex component RRP41-like", "disease": [], "biological_process": [ { "name": "nuclear mRNA surveillance", "id": "GO:0071028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071028", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "rRNA catabolic process", "id": "GO:0016075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016075", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "U4 snRNA 3'-end processing", "id": "GO:0034475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034475", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "poly(A)-dependent snoRNA 3'-end processing", "id": "GO:0071051", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071051", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "seedling development", "id": "GO:0090351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090351", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "3'-5' exonuclease activity", "id": "GO:0008408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008408", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "nuclear exosome (RNase complex)", "id": "GO:0000176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000176", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "cytoplasmic exosome (RNase complex)", "id": "GO:0000177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000177", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" }, { "name": "exosome (RNase complex)", "id": "GO:0000178", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000178", "evidence": [ { "database": "UniProtKB", "id": "A2RVK7", "url": "https://www.uniprot.org/uniprotkb/A2RVK7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A2RVK7-1", "start_pos": "11", "end_pos": "11", "site_lbl": "Thr11", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVK7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A2RVK7-1", "start_pos": "12", "end_pos": "12", "site_lbl": "Tyr12", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVK7" } ] } ] }, { "uniprot_canonical_ac": "A2RVK7-1", "start_pos": "13", "end_pos": "13", "site_lbl": "Ser13", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVK7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A2RVK7-1", "start_pos": "9", "end_pos": "9", "site_lbl": "Thr9", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVK7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JTP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 575, "chemical_mass": 64811.0, "gene_names": "STY46;F20M13.30;F20M13_30;STY46;serine/threonine/tyrosine kinase 46", "protein_name": "Serine/threonine-protein kinase STY46", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "protein serine/threonine/tyrosine kinase activity", "id": "GO:0004712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004712", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" } ], "biological_process": [ { "name": "protein phosphorylation", "id": "GO:0006468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006468", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "122", "end_pos": "122", "site_lbl": "Ser122", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "128", "end_pos": "128", "site_lbl": "Ser128", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Ser129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Thr131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Ser134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "24", "end_pos": "24", "site_lbl": "Thr24", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "257", "end_pos": "257", "site_lbl": "Ser257", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "259", "end_pos": "259", "site_lbl": "Ser259", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "267", "end_pos": "267", "site_lbl": "Thr267", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "300", "end_pos": "300", "site_lbl": "Ser300", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "308", "end_pos": "308", "site_lbl": "Thr308", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "443", "end_pos": "443", "site_lbl": "Thr443", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "PubMed", "id": "21799034", "url": "https://glygen.org/publication/PubMed/21799034" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Loss of autophosphorylation and enzyme activation.", "evidence": [ { "database": "UniProtKB", "id": "F4JTP5", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" }, { "database": "PubMed", "id": "21799034", "url": "https://glygen.org/publication/PubMed/21799034" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "446", "end_pos": "446", "site_lbl": "Thr446", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JTP5-1", "start_pos": "448", "end_pos": "448", "site_lbl": "Thr448", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTP5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A1A6M1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 387, "chemical_mass": 44020.0, "gene_names": "PTAC5;F18A5.60;F18A5_60;PTAC5;plastid transcriptionally active 5", "protein_name": "Protein disulfide isomerase pTAC5, chloroplastic", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast thylakoid", "id": "GO:0009534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009534", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "protein disulfide isomerase activity", "id": "GO:0003756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003756", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "catalytic activity, acting on a protein", "id": "GO:0140096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140096", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" }, { "name": "plastid transcription", "id": "GO:0042793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042793", "evidence": [ { "database": "UniProtKB", "id": "A1A6M1", "url": "https://www.uniprot.org/uniprotkb/A1A6M1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A1A6M1-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Thr250", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A1A6M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A1A6M1" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A1A6M1-1", "start_pos": "287", "end_pos": "287", "site_lbl": "Ser287", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A1A6M1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A1A6M1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JP52-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 826, "chemical_mass": 91306.0, "gene_names": "PQT3;DL4740W;FCAALL.426;dl4740w", "protein_name": "E3 ubiquitin ligase PARAQUAT TOLERANCE 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to hydrogen peroxide", "id": "GO:0042542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042542", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to cadmium ion", "id": "GO:0046686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046686", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "positive regulation of response to oxidative stress", "id": "GO:1902884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902884", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "positive regulation of proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0032436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032436", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "negative regulation of response to oxidative stress", "id": "GO:1902883", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902883", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to paraquat", "id": "GO:1901562", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901562", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "response to mannitol", "id": "GO:0010555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010555", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "cellular response to paraquat", "id": "GO:0072756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072756", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" }, { "name": "ubiquitin-like protein ligase activity", "id": "GO:0061659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061659", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "278", "end_pos": "278", "site_lbl": "Ser278", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Ser381", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "383", "end_pos": "383", "site_lbl": "Thr383", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "385", "end_pos": "385", "site_lbl": "Ser385", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "388", "end_pos": "388", "site_lbl": "Ser388", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "397", "end_pos": "397", "site_lbl": "Ser397", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "634", "end_pos": "634", "site_lbl": "Ser634", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "678", "end_pos": "678", "site_lbl": "Ser678", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "720", "end_pos": "720", "site_lbl": "Thr720", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "751", "end_pos": "751", "site_lbl": "Ser751", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "752", "end_pos": "752", "site_lbl": "Ser752", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "782", "end_pos": "782", "site_lbl": "Ser782", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "783", "end_pos": "783", "site_lbl": "Ser783", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "797", "end_pos": "797", "site_lbl": "Tyr797", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "800", "end_pos": "800", "site_lbl": "Ser800", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JP52", "url": "https://www.uniprot.org/uniprotkb/F4JP52" }, { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "802", "end_pos": "802", "site_lbl": "Ser802", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JP52-1", "start_pos": "806", "end_pos": "806", "site_lbl": "Ser806", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JP52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JP52" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JPW1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 407, "chemical_mass": 44582.0, "gene_names": "BASS5;BAT5;BASS5;BAT5;BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5;F16J13.100;F16J13_100;bile acid transporter 5", "protein_name": "Probable sodium/metabolite cotransporter BASS5, chloroplastic", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "glucosinolate biosynthetic process", "id": "GO:0019761", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019761", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" }, { "name": "glucosinolate biosynthetic process from homomethionine", "id": "GO:0033506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033506", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" } ], "molecular_function": [ { "name": "monocarboxylic acid transmembrane transporter activity", "id": "GO:0008028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008028", "evidence": [ { "database": "UniProtKB", "id": "F4JPW1", "url": "https://www.uniprot.org/uniprotkb/F4JPW1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JNA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1147, "chemical_mass": 130429.0, "gene_names": "RPP4;CHS2;DL4460C;FCAALL.47;RPP4;dl4460c;recognition of peronospora parasitica 4", "protein_name": "Disease resistance protein RPP4", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JNA9-1", "start_pos": "159", "end_pos": "159", "site_lbl": "Thr159", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 159, "start_aa": "Thr", "end_pos": 159, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr159", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JNA9-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Ser389", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "F", "comment": "In the gain-of-function mutants chs2-1 and chs2-2; seedling lethality when grown at temperatures below 12 degrees Celsius. Dwarf plants with chlorotic leaves when grown between 16 and 18 degrees Celsius. No visible phenotype when grown at 22 degrees Celsius.", "evidence": [ { "database": "UniProtKB", "id": "F4JNA9", "url": "https://www.uniprot.org/uniprotkb/F4JNA9" }, { "database": "PubMed", "id": "20699401", "url": "https://glygen.org/publication/PubMed/20699401" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JNY0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 610, "chemical_mass": 67825.0, "gene_names": "APE2;T19K4.180;T19K4_180", "protein_name": "DNA-(apurinic or apyrimidinic site) endonuclease 2", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "base-excision repair", "id": "GO:0006284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006284", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "DNA-(apurinic or apyrimidinic site) endonuclease activity", "id": "GO:0003906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003906", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "phosphoric diester hydrolase activity", "id": "GO:0008081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008081", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "double-stranded DNA 3'-5' DNA exonuclease activity", "id": "GO:0008311", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008311", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "exonuclease activity", "id": "GO:0004527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004527", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "polynucleotide 3'-phosphatase activity", "id": "GO:0046403", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046403", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "F4JNY0", "url": "https://www.uniprot.org/uniprotkb/F4JNY0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JNY0-1", "start_pos": "420", "end_pos": "420", "site_lbl": "Ser420", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JNY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JNY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JNY0-1", "start_pos": "429", "end_pos": "429", "site_lbl": "Thr429", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JNY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JNY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JNY0-1", "start_pos": "440", "end_pos": "440", "site_lbl": "Ser440", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JNY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JNY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JIN3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 661, "chemical_mass": 74825.0, "gene_names": "ATERDJ2B;ERDJ2B;ATERDJ2B;C29;F7J7.120;F7J7_120", "protein_name": "DnaJ protein ERDJ2B", "disease": [], "biological_process": [ { "name": "post-translational protein targeting to endoplasmic reticulum membrane", "id": "GO:0006620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006620", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "SRP-dependent cotranslational protein targeting to membrane", "id": "GO:0006614", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006614", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "Sec62/Sec63 complex", "id": "GO:0031207", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031207", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JIN3", "url": "https://www.uniprot.org/uniprotkb/F4JIN3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JIN3-1", "start_pos": "90", "end_pos": "90", "site_lbl": "Asn90", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 90, "start_aa": "Asn", "end_pos": 90, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn90", "evidence": [ { "id": "F4JIN3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JIN3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JIN3-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Ser143", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JIN3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JIN3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JUU5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 513, "chemical_mass": 56824.0, "gene_names": "S2P;F1C12.220;F1C12_220", "protein_name": "Membrane-bound transcription factor site-2 protease homolog", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" } ], "molecular_function": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "membrane protein intracellular domain proteolysis", "id": "GO:0031293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031293", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "cellular hyperosmotic salinity response", "id": "GO:0071475", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071475", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "regulation of response to endoplasmic reticulum stress", "id": "GO:1905897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905897", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" }, { "name": "regulation of brassinosteroid mediated signaling pathway", "id": "GO:1900457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900457", "evidence": [ { "database": "UniProtKB", "id": "F4JUU5", "url": "https://www.uniprot.org/uniprotkb/F4JUU5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JQH3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 645, "chemical_mass": 71993.0, "gene_names": "APP1;AP22.64;AP22_64;APP1;ARABIDOPSIS THALIANA AMINOPEPTIDASE P1;ATAPP1;C7A10.600;aminopeptidase P1", "protein_name": "Aminopeptidase P1", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "auxin polar transport", "id": "GO:0009926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009926", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "manganese ion binding", "id": "GO:0030145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030145", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "metalloaminopeptidase activity", "id": "GO:0070006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070006", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "N-1-naphthylphthalamic acid binding", "id": "GO:0010013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010013", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JQH3", "url": "https://www.uniprot.org/uniprotkb/F4JQH3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JQH3-1", "start_pos": "169", "end_pos": "169", "site_lbl": "Ser169", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JQH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JQH3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C6KIE6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 861, "chemical_mass": 97183.0, "gene_names": "XLG2;F10M10.160;F10M10_160;XLG2;extra-large GTP-binding protein 2", "protein_name": "Extra-large guanine nucleotide-binding protein 2", "disease": [], "molecular_function": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "G protein-coupled receptor binding", "id": "GO:0001664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001664", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "G-protein beta/gamma-subunit complex binding", "id": "GO:0031683", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031683", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "cell periphery", "id": "GO:0071944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071944", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "heterotrimeric G-protein complex", "id": "GO:0005834", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005834", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" } ], "biological_process": [ { "name": "adenylate cyclase-modulating G protein-coupled receptor signaling pathway", "id": "GO:0007188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007188", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "positive regulation of plant-type hypersensitive response", "id": "GO:0034052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034052", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" }, { "name": "G protein-coupled receptor signaling pathway", "id": "GO:0007186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007186", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "13", "end_pos": "13", "site_lbl": "Ser13", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Ser141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "O48814-1", "kinase_gene_name": "BIK1", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "27043937", "url": "https://glygen.org/publication/PubMed/27043937" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "148", "end_pos": "148", "site_lbl": "Ser148", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "O48814-1", "kinase_gene_name": "BIK1", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "27043937", "url": "https://glygen.org/publication/PubMed/27043937" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Ser150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "O48814-1", "kinase_gene_name": "BIK1", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "27043937", "url": "https://glygen.org/publication/PubMed/27043937" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Ser151", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "O48814-1", "kinase_gene_name": "BIK1", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "27043937", "url": "https://glygen.org/publication/PubMed/27043937" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "154", "end_pos": "154", "site_lbl": "Ser154", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Ser156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "169", "end_pos": "169", "site_lbl": "Ser169", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Ser23", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "530", "end_pos": "530", "site_lbl": "Ser530", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "71", "end_pos": "71", "site_lbl": "Ser71", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "75", "end_pos": "75", "site_lbl": "Ser75", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C6KIE6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C6KIE6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C6KIE6-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Thr476", "weight": 0.0, "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Strongly reduces GTP-binding and GTPase activity.", "evidence": [ { "database": "UniProtKB", "id": "C6KIE6", "url": "https://www.uniprot.org/uniprotkb/C6KIE6" }, { "database": "PubMed", "id": "22232549", "url": "https://glygen.org/publication/PubMed/22232549" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JGZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1278, "chemical_mass": 138187.0, "gene_names": "MED16;SFR6;AtSFR6;IEN1;INSENSITIVE TO EXOGENOUS NAD+ 1;MED16_1;MED16;MEDIATOR 16;SENSITIVE TO FREEZING 6;SFR6;T1J1.2;T1J1_2;YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1;YID1", "protein_name": "Mediator of RNA polymerase II transcription subunit 16", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "circadian regulation of gene expression", "id": "GO:0032922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032922", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "trichome branching", "id": "GO:0010091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010091", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of ethylene-activated signaling pathway", "id": "GO:0010104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010104", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of cell wall pectin metabolic process", "id": "GO:1902066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902066", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "trichome papilla formation", "id": "GO:1905499", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905499", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of jasmonic acid mediated signaling pathway", "id": "GO:2000022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000022", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of plant-type cell wall cellulose biosynthetic process", "id": "GO:2001009", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001009", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "positive regulation of plant-type cell wall cellulose biosynthetic process", "id": "GO:2001011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001011", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "regulation of long-day photoperiodism, flowering", "id": "GO:0048586", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048586", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" }, { "name": "positive regulation of systemic acquired resistance", "id": "GO:1901672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901672", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4JGZ1", "url": "https://www.uniprot.org/uniprotkb/F4JGZ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JGZ1-1", "start_pos": "998", "end_pos": "998", "site_lbl": "Thr998", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 998, "start_aa": "Thr", "end_pos": 998, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr998", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JGZ1-1", "start_pos": "553", "end_pos": "553", "site_lbl": "Ser553", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGZ1" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A2RVM0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 322, "chemical_mass": 34740.0, "gene_names": "TIC32-IVA;TIC32;AtTic32-IVa;F16G20.130;F16G20_130;Tic32-IVa;translocon at the inner envelope membrane of chloroplasts 32-IVa", "protein_name": "Short-chain dehydrogenase TIC 32, chloroplastic", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "A2RVM0", "url": "https://www.uniprot.org/uniprotkb/A2RVM0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A2RVM0-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Ser321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVM0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVM0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JGP4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 790, "chemical_mass": 89194.0, "gene_names": "ATK5;KIN14D;ATK5;C17L7.110;C17L7_110;C6L9.1;kinesin 5", "protein_name": "Kinesin-like protein KIN-14D", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "microtubule motor activity", "id": "GO:0003777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003777", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "kinesin complex", "id": "GO:0005871", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005871", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "spindle microtubule", "id": "GO:0005876", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005876", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" } ], "biological_process": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "microtubule-based movement", "id": "GO:0007018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007018", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" }, { "name": "spindle assembly", "id": "GO:0051225", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051225", "evidence": [ { "database": "UniProtKB", "id": "F4JGP4", "url": "https://www.uniprot.org/uniprotkb/F4JGP4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JGP4-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGP4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JGP4-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Ser23", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGP4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JGP4-1", "start_pos": "330", "end_pos": "330", "site_lbl": "Ser330", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGP4" } ] } ] }, { "uniprot_canonical_ac": "F4JGP4-1", "start_pos": "567", "end_pos": "567", "site_lbl": "Tyr567", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGP4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JGP4-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Ser570", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGP4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGP4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A4FVP2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 565, "chemical_mass": 65753.0, "gene_names": "TPS03;ATTPS03;DL4395W;FCAALL.18;TPS03;dl4395w;terpene synthase 03", "protein_name": "Terpenoid synthase 3, chloroplastic", "disease": [], "molecular_function": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "terpene synthase activity", "id": "GO:0010333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010333", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "alpha-farnesene synthase activity", "id": "GO:0052578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052578", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "(E)-beta-ocimene synthase activity", "id": "GO:0034768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034768", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "myrcene synthase activity", "id": "GO:0050551", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050551", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "response to insect", "id": "GO:0009625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009625", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "terpene biosynthetic process", "id": "GO:0046246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046246", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "diterpenoid biosynthetic process", "id": "GO:0016102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016102", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "sesquiterpenoid biosynthetic process", "id": "GO:0016106", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016106", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "response to herbivore", "id": "GO:0080027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080027", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" }, { "name": "terpenoid biosynthetic process", "id": "GO:0016114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016114", "evidence": [ { "database": "UniProtKB", "id": "A4FVP2", "url": "https://www.uniprot.org/uniprotkb/A4FVP2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JI44-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 913, "chemical_mass": 101566.0, "gene_names": "NDX;AtNDX;F4C21.1;NDX;Nodulin Homeobox;T4I9.3;T4I9_3", "protein_name": "Nodulin homeobox", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "single-stranded DNA binding", "id": "GO:0003697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003697", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" } ], "biological_process": [ { "name": "negative regulation of antisense RNA transcription", "id": "GO:0060195", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060195", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4JI44", "url": "https://www.uniprot.org/uniprotkb/F4JI44" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Ser258", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "272", "end_pos": "272", "site_lbl": "Thr272", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "274", "end_pos": "274", "site_lbl": "Thr274", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "783", "end_pos": "783", "site_lbl": "Ser783", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "796", "end_pos": "796", "site_lbl": "Thr796", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "816", "end_pos": "816", "site_lbl": "Thr816", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JI44-1", "start_pos": "818", "end_pos": "818", "site_lbl": "Ser818", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI44", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI44" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JUY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 376, "chemical_mass": 41564.0, "gene_names": "GAMT1;AtGAMT1;GAMT1;M3E9.150;M3E9_150;gibberellin methyltransferase 1", "protein_name": "Gibberellic acid methyltransferase 1", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" }, { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" }, { "name": "gibberellin carboxyl-O-methyltransferase activity", "id": "GO:0010341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010341", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" }, { "name": "gibberellin A9 carboxyl methyltransferase activity", "id": "GO:0102117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102117", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" } ], "biological_process": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "F4JUY5", "url": "https://www.uniprot.org/uniprotkb/F4JUY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MQY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 473, "chemical_mass": 53599.0, "gene_names": "NAC68;NTM1;ANAC068;Arabidopsis NAC domain containing protein 68;F11O4.4;F11O4_4;NAC with transmembrane motif1;NTL12;NTM1", "protein_name": "NAC domain-containing protein 68", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "cytokinin-activated signaling pathway", "id": "GO:0009736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009736", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "leaf morphogenesis", "id": "GO:0009965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009965", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A8MQY1", "url": "https://www.uniprot.org/uniprotkb/A8MQY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JS25-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1052, "chemical_mass": 118107.0, "gene_names": "SRFR1;F6G17.110;F6G17_110;SNC5;SRFR1;SUPPRESSOR OF RPS4-RLD 1", "protein_name": "Suppressor of RPS4-RLD 1", "disease": [], "molecular_function": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" } ], "biological_process": [ { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" }, { "name": "negative regulation of defense response", "id": "GO:0031348", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031348", "evidence": [ { "database": "UniProtKB", "id": "F4JS25", "url": "https://www.uniprot.org/uniprotkb/F4JS25" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JS25-1", "start_pos": "416", "end_pos": "416", "site_lbl": "Thr416", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JS25", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JS25" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JHA2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 884, "chemical_mass": 98690.0, "gene_names": "RSH1;AT-RSH1;ATRSH1;RELA-SPOT HOMOLOG 1;RELA/SPOT HOMOLOG 1;RELA/SPOT homolog 1;RSH1;SPOT HOMOLOG 1;SPOT homolog 1;T2H3.10;T2H3_10", "protein_name": "Putative GTP diphosphokinase RSH1, chloroplastic", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity", "id": "GO:0008893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008893", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "GTP diphosphokinase activity", "id": "GO:0008728", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008728", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "guanosine tetraphosphate metabolic process", "id": "GO:0015969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015969", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "leaf senescence", "id": "GO:0010150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010150", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" }, { "name": "photosynthesis", "id": "GO:0015979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015979", "evidence": [ { "database": "UniProtKB", "id": "F4JHA2", "url": "https://www.uniprot.org/uniprotkb/F4JHA2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JQZ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 920, "chemical_mass": 100627.0, "gene_names": "REN1;F22K18.2200;F22K18.220;F22K18_220;REN1;ROP1 ENHANCER 1", "protein_name": "Rho GTPase-activating protein REN1", "disease": [], "molecular_function": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "cell cortex", "id": "GO:0005938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005938", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "apical part of cell", "id": "GO:0045177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045177", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "exocytic vesicle", "id": "GO:0070382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070382", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "pollen tube", "id": "GO:0090406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090406", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "positive regulation of GTPase activity", "id": "GO:0043547", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043547", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "negative regulation of Rho protein signal transduction", "id": "GO:0035024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035024", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "pollen germination", "id": "GO:0009846", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009846", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "pollen tube adhesion", "id": "GO:0009865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009865", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" }, { "name": "pollen tube development", "id": "GO:0048868", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048868", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JQZ3-1", "start_pos": "859", "end_pos": "859", "site_lbl": "Thr859", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 859, "start_aa": "Thr", "end_pos": 859, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr859", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JQZ3-1", "start_pos": "857", "end_pos": "857", "site_lbl": "Ser857", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JQZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JQZ3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4JQZ3-1", "start_pos": "886", "end_pos": "886", "site_lbl": "Ser886", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JQZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JQZ3" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] }, { "uniprot_canonical_ac": "F4JQZ3-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Arg244", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "L", "comment": "Loss of function as activator.", "evidence": [ { "database": "UniProtKB", "id": "F4JQZ3", "url": "https://www.uniprot.org/uniprotkb/F4JQZ3" }, { "database": "PubMed", "id": "19108776", "url": "https://glygen.org/publication/PubMed/19108776" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGW2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 884, "chemical_mass": 98530.0, "gene_names": "MTH12.9;PAM74;MTH12.9;MTH12_9", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase PAM74", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Asn143", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 143, "start_aa": "Asn", "end_pos": 143, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn143", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "182", "end_pos": "182", "site_lbl": "Asn182", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 182, "start_aa": "Asn", "end_pos": 182, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn182", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "200", "end_pos": "200", "site_lbl": "Asn200", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 200, "start_aa": "Asn", "end_pos": 200, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn200", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Thr253", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 253, "start_aa": "Thr", "end_pos": 253, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr253", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "256", "end_pos": "256", "site_lbl": "Asn256", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 256, "start_aa": "Asn", "end_pos": 256, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn256", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Asn289", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 289, "start_aa": "Asn", "end_pos": 289, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn289", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "400", "end_pos": "400", "site_lbl": "Asn400", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 400, "start_aa": "Asn", "end_pos": 400, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn400", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "403", "end_pos": "403", "site_lbl": "Asn403", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 403, "start_aa": "Asn", "end_pos": 403, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn403", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Asn417", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 417, "start_aa": "Asn", "end_pos": 417, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn417", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Asn433", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 433, "start_aa": "Asn", "end_pos": 433, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn433", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "444", "end_pos": "444", "site_lbl": "Asn444", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 444, "start_aa": "Asn", "end_pos": 444, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn444", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Asn465", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 465, "start_aa": "Asn", "end_pos": 465, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn465", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "470", "end_pos": "470", "site_lbl": "Asn470", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 470, "start_aa": "Asn", "end_pos": 470, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn470", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "744", "end_pos": "744", "site_lbl": "Thr744", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 744, "start_aa": "Thr", "end_pos": 744, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr744", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Thr570", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Tyr652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "738", "end_pos": "738", "site_lbl": "Ser738", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "739", "end_pos": "739", "site_lbl": "Thr739", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_canonical_ac": "C0LGW2-1", "start_pos": "752", "end_pos": "752", "site_lbl": "Tyr752", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW2", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K128-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1064, "chemical_mass": 122887.0, "gene_names": "CHR23;AtCHR23;CHR23;F7K24.60;F7K24_60;MINU2;chromatin remodeling 23", "protein_name": "Probable ATP-dependent DNA helicase CHR23", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "nucleosome array spacer activity", "id": "GO:0140750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140750", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "unidimensional cell growth", "id": "GO:0009826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009826", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "maintenance of seed dormancy", "id": "GO:0010231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010231", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "maintenance of shoot apical meristem identity", "id": "GO:0010492", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010492", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "F4K128", "url": "https://www.uniprot.org/uniprotkb/F4K128" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4K128-1", "start_pos": "1049", "end_pos": "1049", "site_lbl": "Ser1049", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K128", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K128" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4K128-1", "start_pos": "969", "end_pos": "969", "site_lbl": "Ser969", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K128", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K128" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0SVK0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 291, "chemical_mass": 32470.0, "gene_names": "DOG1;ATDOG1;DELAY OF GERMINATION 1;DOG1;GAAS5;GLUCOSE SENSING QTL 5;GSQ5;K15I22.3;K15I22_3;germination ability after storage 5", "protein_name": "Protein DELAY OF GERMINATION 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "seed dormancy process", "id": "GO:0010162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010162", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "sugar mediated signaling pathway", "id": "GO:0010182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010182", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "regulation of seed dormancy process", "id": "GO:2000033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000033", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0SVK0-1", "start_pos": "15", "end_pos": "15", "site_lbl": "Tyr15", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "A", "comment": "Strongly reduced self-binding.", "evidence": [ { "database": "UniProtKB", "id": "A0SVK0", "url": "https://www.uniprot.org/uniprotkb/A0SVK0" }, { "database": "PubMed", "id": "26684465", "url": "https://glygen.org/publication/PubMed/26684465" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JZW1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 494, "chemical_mass": 56172.0, "gene_names": "PBL13;K2K18.3;K2K18_3", "protein_name": "Serine/threonine-protein kinase PBL13", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" } ], "biological_process": [ { "name": "protein phosphorylation", "id": "GO:0006468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006468", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" }, { "name": "negative regulation of immune response", "id": "GO:0050777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050777", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Tyr156", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Ser210", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "240", "end_pos": "240", "site_lbl": "Ser240", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "241", "end_pos": "241", "site_lbl": "Thr241", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "246", "end_pos": "246", "site_lbl": "Thr246", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Tyr254", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Ser321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Thr323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "383", "end_pos": "383", "site_lbl": "Thr383", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "384", "end_pos": "384", "site_lbl": "Ser384", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "395", "end_pos": "395", "site_lbl": "Thr395", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "398", "end_pos": "398", "site_lbl": "Thr398", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "406", "end_pos": "406", "site_lbl": "Thr406", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "413", "end_pos": "413", "site_lbl": "Thr413", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "421", "end_pos": "421", "site_lbl": "Thr421", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Thr428", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "429", "end_pos": "429", "site_lbl": "Ser429", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "443", "end_pos": "443", "site_lbl": "Thr443", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "444", "end_pos": "444", "site_lbl": "Ser444", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Ser455", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "456", "end_pos": "456", "site_lbl": "Thr456", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "481", "end_pos": "481", "site_lbl": "Tyr481", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "F4JZW1-1", "kinase_gene_name": "PBL13", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "65", "end_pos": "65", "site_lbl": "Thr65", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "73", "end_pos": "73", "site_lbl": "Thr73", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "77", "end_pos": "77", "site_lbl": "Ser77", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Ser78", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "79", "end_pos": "79", "site_lbl": "Ser79", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZW1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZW1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4JZW1-1", "start_pos": "111", "end_pos": "111", "site_lbl": "Lys111", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Abolishes kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4JZW1", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" }, { "database": "PubMed", "id": "26432875", "url": "https://glygen.org/publication/PubMed/26432875" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A9QM73-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1059, "chemical_mass": 117006.0, "gene_names": "SMG7;F7K24.150;F7K24_150;F7K24;SMG7", "protein_name": "Nonsense-mediated mRNA decay factor SMG7", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "P-body", "id": "GO:0000932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000932", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "telomerase holoenzyme complex", "id": "GO:0005697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005697", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "id": "GO:0000184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000184", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "meiotic spindle assembly", "id": "GO:0090306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090306", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "programmed cell death", "id": "GO:0012501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012501", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "regulation of defense response", "id": "GO:0031347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031347", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" } ], "molecular_function": [ { "name": "telomeric DNA binding", "id": "GO:0042162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042162", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" }, { "name": "telomerase RNA binding", "id": "GO:0070034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070034", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "682", "end_pos": "682", "site_lbl": "Ser682", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 682, "start_aa": "Ser", "end_pos": 682, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser682", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "684", "end_pos": "684", "site_lbl": "Ser684", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 684, "start_aa": "Ser", "end_pos": 684, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser684", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "801", "end_pos": "801", "site_lbl": "Thr801", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 801, "start_aa": "Thr", "end_pos": 801, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr801", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "806", "end_pos": "806", "site_lbl": "Ser806", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 806, "start_aa": "Ser", "end_pos": 806, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser806", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "809", "end_pos": "809", "site_lbl": "Ser809", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 809, "start_aa": "Ser", "end_pos": 809, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser809", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "813", "end_pos": "813", "site_lbl": "Ser813", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 813, "start_aa": "Ser", "end_pos": 813, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser813", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "815", "end_pos": "815", "site_lbl": "Ser815", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 815, "start_aa": "Ser", "end_pos": 815, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser815", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "816", "end_pos": "816", "site_lbl": "Thr816", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 816, "start_aa": "Thr", "end_pos": 816, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr816", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "817", "end_pos": "817", "site_lbl": "Ser817", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 817, "start_aa": "Ser", "end_pos": 817, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser817", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "A9QM73", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/A9QM73" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "602", "end_pos": "602", "site_lbl": "Ser602", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9QM73", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9QM73" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A9QM73-1", "start_pos": "933", "end_pos": "933", "site_lbl": "Gly933", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "A", "comment": "Abolished interaction with EXA1.", "evidence": [ { "database": "UniProtKB", "id": "A9QM73", "url": "https://www.uniprot.org/uniprotkb/A9QM73" }, { "database": "PubMed", "id": "29073135", "url": "https://glygen.org/publication/PubMed/29073135" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DGI8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 314, "chemical_mass": 34311.0, "gene_names": "BZIP63;BZO2H3;Arabidopsis thaliana basic leucine zipper 63;AtbZIP63;BZO2H3;T32B20.4;T32B20_4", "protein_name": "Basic leucine zipper 63", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "kinase binding", "id": "GO:0019900", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019900", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "cellular response to glucose stimulus", "id": "GO:0071333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071333", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "cellular response to starvation", "id": "GO:0009267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009267", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "entrainment of circadian clock", "id": "GO:0009649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009649", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" }, { "name": "cellular response to abscisic acid stimulus", "id": "GO:0071215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071215", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Ser102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Ser160", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Normal DNA-binding.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] }, { "sequence_org": "S", "sequence_mut": "D", "comment": "Reduced DNA-binding to C-box motif.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "261", "end_pos": "261", "site_lbl": "Ser261", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "294", "end_pos": "294", "site_lbl": "Ser294", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Reduces activity. Abolishes the formation of the BZIP2-BZIP63 heterodimer; when associated with A-29 and A-300.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "29348240", "url": "https://glygen.org/publication/PubMed/29348240" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "29", "end_pos": "29", "site_lbl": "Ser29", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Reduces its activity. Abolishes the formation of the BZIP2-BZIP63 heterodimer; when associated with A-294 and A-300.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "29348240", "url": "https://glygen.org/publication/PubMed/29348240" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "300", "end_pos": "300", "site_lbl": "Ser300", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Reduces activity. Abolishes the formation of the BZIP2-BZIP63 heterodimer; when associated with A-29 and A-294.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "29348240", "url": "https://glygen.org/publication/PubMed/29348240" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "59", "end_pos": "59", "site_lbl": "Ser59", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGI8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGI8" }, { "database": "PubMed", "id": "26263501", "url": "https://glygen.org/publication/PubMed/26263501" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "164", "end_pos": "164", "site_lbl": "Ser164", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Normal DNA-binding.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] }, { "sequence_org": "S", "sequence_mut": "D", "comment": "Impaired DNA-binding to C-box motif.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] } ] }, { "uniprot_canonical_ac": "B9DGI8-1", "start_pos": "168", "end_pos": "168", "site_lbl": "Ser168", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Normal DNA-binding.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] }, { "sequence_org": "S", "sequence_mut": "D", "comment": "Impaired DNA-binding to C-box motif.", "evidence": [ { "database": "UniProtKB", "id": "B9DGI8", "url": "https://www.uniprot.org/uniprotkb/B9DGI8" }, { "database": "PubMed", "id": "20047775", "url": "https://glygen.org/publication/PubMed/20047775" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DGD6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 743, "chemical_mass": 81889.0, "gene_names": "ACS;ACS;F5H8.15;acetyl-CoA synthetase", "protein_name": "Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal", "disease": [], "biological_process": [ { "name": "acetate metabolic process", "id": "GO:0006083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006083", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "acetyl-CoA biosynthetic process", "id": "GO:0006085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006085", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "acetyl-CoA biosynthetic process from acetate", "id": "GO:0019427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019427", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" } ], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "AMP binding", "id": "GO:0016208", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016208", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "acetate-CoA ligase activity", "id": "GO:0003987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003987", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "glyoxysome", "id": "GO:0009514", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009514", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "B9DGD6", "url": "https://www.uniprot.org/uniprotkb/B9DGD6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "39", "end_pos": "39", "site_lbl": "Ser39", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Ser52", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Ser5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "61", "end_pos": "61", "site_lbl": "Ser61", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "63", "end_pos": "63", "site_lbl": "Ser63", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B9DGD6-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGD6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGD6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JZG9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 384, "chemical_mass": 41900.0, "gene_names": "PDE149;TERC;ATTERC;MXC9.9;MXC9_9;PDE149;PIGMENT DEFECTIVE 149;TELLURITE RESISTANCE C", "protein_name": "Thylakoid membrane protein TERC, chloroplastic", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" }, { "name": "chloroplast thylakoid", "id": "GO:0009534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009534", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" } ], "biological_process": [ { "name": "thylakoid membrane organization", "id": "GO:0010027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010027", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" }, { "name": "seedling development", "id": "GO:0090351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090351", "evidence": [ { "database": "UniProtKB", "id": "F4JZG9", "url": "https://www.uniprot.org/uniprotkb/F4JZG9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JZG9-1", "start_pos": "101", "end_pos": "101", "site_lbl": "Ser101", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZG9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZG9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JZG9-1", "start_pos": "95", "end_pos": "95", "site_lbl": "Ser95", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZG9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZG9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B6EUB3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1605, "chemical_mass": 181210.0, "gene_names": "PDS5A;MNJ7.28", "protein_name": "Sister chromatid cohesion protein PDS5 homolog A", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" }, { "name": "microsporogenesis", "id": "GO:0009556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009556", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" } ], "molecular_function": [ { "name": "cohesin unloader activity", "id": "GO:0140670", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140670", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1130", "end_pos": "1130", "site_lbl": "Thr1130", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1131", "end_pos": "1131", "site_lbl": "Ser1131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1141", "end_pos": "1141", "site_lbl": "Ser1141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1211", "end_pos": "1211", "site_lbl": "Ser1211", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1245", "end_pos": "1245", "site_lbl": "Ser1245", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1247", "end_pos": "1247", "site_lbl": "Ser1247", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1250", "end_pos": "1250", "site_lbl": "Ser1250", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1266", "end_pos": "1266", "site_lbl": "Ser1266", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1274", "end_pos": "1274", "site_lbl": "Ser1274", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1281", "end_pos": "1281", "site_lbl": "Ser1281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1284", "end_pos": "1284", "site_lbl": "Ser1284", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1289", "end_pos": "1289", "site_lbl": "Ser1289", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1297", "end_pos": "1297", "site_lbl": "Ser1297", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1299", "end_pos": "1299", "site_lbl": "Ser1299", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1460", "end_pos": "1460", "site_lbl": "Thr1460", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1461", "end_pos": "1461", "site_lbl": "Thr1461", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1462", "end_pos": "1462", "site_lbl": "Thr1462", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1486", "end_pos": "1486", "site_lbl": "Ser1486", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1494", "end_pos": "1494", "site_lbl": "Ser1494", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1501", "end_pos": "1501", "site_lbl": "Ser1501", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1510", "end_pos": "1510", "site_lbl": "Ser1510", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1518", "end_pos": "1518", "site_lbl": "Ser1518", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1520", "end_pos": "1520", "site_lbl": "Ser1520", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1524", "end_pos": "1524", "site_lbl": "Ser1524", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1546", "end_pos": "1546", "site_lbl": "Thr1546", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1548", "end_pos": "1548", "site_lbl": "Ser1548", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1549", "end_pos": "1549", "site_lbl": "Ser1549", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1562", "end_pos": "1562", "site_lbl": "Ser1562", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1564", "end_pos": "1564", "site_lbl": "Thr1564", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1583", "end_pos": "1583", "site_lbl": "Thr1583", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1584", "end_pos": "1584", "site_lbl": "Ser1584", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "1588", "end_pos": "1588", "site_lbl": "Thr1588", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUB3", "url": "https://www.uniprot.org/uniprotkb/B6EUB3" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "505", "end_pos": "505", "site_lbl": "Ser505", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "530", "end_pos": "530", "site_lbl": "Ser530", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "566", "end_pos": "566", "site_lbl": "Thr566", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "567", "end_pos": "567", "site_lbl": "Ser567", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "569", "end_pos": "569", "site_lbl": "Thr569", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "B6EUB3-1", "start_pos": "572", "end_pos": "572", "site_lbl": "Ser572", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUB3" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFX7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 883, "chemical_mass": 94260.0, "gene_names": "PAA2;ARABIDOPSIS HEAVY METAL ATPASE 8;ATHMA8;F13M11;HEAVY METAL ATPASE 8;HMA8;P-type ATPase of Arabidopsis 2;PAA2;T6G21", "protein_name": "Copper-transporting ATPase PAA2, chloroplastic", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "copper ion transmembrane transporter activity", "id": "GO:0005375", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005375", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "P-type divalent copper transporter activity", "id": "GO:0043682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043682", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "ATPase-coupled monoatomic cation transmembrane transporter activity", "id": "GO:0019829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019829", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" } ], "biological_process": [ { "name": "copper ion transport", "id": "GO:0006825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006825", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "copper ion homeostasis", "id": "GO:0055070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055070", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" }, { "name": "photosynthetic electron transport chain", "id": "GO:0009767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009767", "evidence": [ { "database": "UniProtKB", "id": "B9DFX7", "url": "https://www.uniprot.org/uniprotkb/B9DFX7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFX7-1", "start_pos": "133", "end_pos": "133", "site_lbl": "Ser133", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFX7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFX7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFS6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 572, "chemical_mass": 64282.0, "gene_names": "SNX2B;SNX2b;T28J14.60;T28J14_60;sorting nexin 2B", "protein_name": "Sorting nexin 2B", "disease": [], "molecular_function": [ { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "phosphatidylinositol binding", "id": "GO:0035091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035091", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "multivesicular body membrane", "id": "GO:0032585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032585", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "retromer complex", "id": "GO:0030904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030904", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "developmental process", "id": "GO:0032502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032502", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "protein maturation", "id": "GO:0051604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051604", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "late endosome to vacuole transport", "id": "GO:0045324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045324", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" }, { "name": "seedling development", "id": "GO:0090351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090351", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "133", "end_pos": "133", "site_lbl": "Ser133", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DFS6", "url": "https://www.uniprot.org/uniprotkb/B9DFS6" }, { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "135", "end_pos": "135", "site_lbl": "Ser135", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "136", "end_pos": "136", "site_lbl": "Ser136", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Ser138", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Ser139", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Ser323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "80", "end_pos": "80", "site_lbl": "Ser80", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "B9DFS6-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Ser82", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFS6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFS6" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JW79-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1493, "chemical_mass": 158039.0, "gene_names": "KTF1;RDM3;KTF1;SPT5-LIKE;SPT5L;T19N18.20;T19N18_20;kow domain-containing transcription factor 1", "protein_name": "Protein RNA-directed DNA methylation 3", "disease": [], "cellular_component": [ { "name": "DSIF complex", "id": "GO:0032044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032044", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "transcription elongation by RNA polymerase II", "id": "GO:0006368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006368", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "siRNA processing", "id": "GO:0030422", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030422", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription elongation", "id": "GO:0032784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032784", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "gene silencing by siRNA-directed DNA methylation", "id": "GO:0080188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080188", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" }, { "name": "DNA-templated transcription elongation", "id": "GO:0006354", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006354", "evidence": [ { "database": "UniProtKB", "id": "F4JW79", "url": "https://www.uniprot.org/uniprotkb/F4JW79" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JW79-1", "start_pos": "744", "end_pos": "744", "site_lbl": "Thr744", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 744, "start_aa": "Thr", "end_pos": 744, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr744", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JW79-1", "start_pos": "292", "end_pos": "292", "site_lbl": "Thr292", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JW79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JW79" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JW79-1", "start_pos": "561", "end_pos": "561", "site_lbl": "Ser561", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JW79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JW79" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JW79-1", "start_pos": "579", "end_pos": "579", "site_lbl": "Ser579", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JW79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JW79" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JW79-1", "start_pos": "585", "end_pos": "585", "site_lbl": "Ser585", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JW79", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JW79" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGU5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 614, "chemical_mass": 68206.0, "gene_names": "CIK4;MRA19.22;MRA19_22", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 4", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "coreceptor activity", "id": "GO:0015026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015026", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" }, { "name": "homeostasis of number of meristem cells", "id": "GO:0007639", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007639", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "186", "end_pos": "186", "site_lbl": "Asn186", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 186, "start_aa": "Asn", "end_pos": 186, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn186", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "191", "end_pos": "191", "site_lbl": "Thr191", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 191, "start_aa": "Thr", "end_pos": 191, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr191", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Asn193", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 193, "start_aa": "Asn", "end_pos": 193, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn193", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "224", "end_pos": "224", "site_lbl": "Asn224", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 224, "start_aa": "Asn", "end_pos": 224, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn224", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "297", "end_pos": "297", "site_lbl": "Thr297", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Thr323", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "459", "end_pos": "459", "site_lbl": "Thr459", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Thr460", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Thr465", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "473", "end_pos": "473", "site_lbl": "Tyr473", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "475", "end_pos": "475", "site_lbl": "Ser475", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Thr476", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "480", "end_pos": "480", "site_lbl": "Ser480", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_canonical_ac": "C0LGU5-1", "start_pos": "555", "end_pos": "555", "site_lbl": "Thr555", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU5", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JXF1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 581, "chemical_mass": 64079.0, "gene_names": "GAF1;AtRPP30;GAF1;GAMETOPHYTE DEFECTIVE 1;MMN10.23;MMN10_23;RPP30", "protein_name": "Protein GAMETOPHYTE DEFECTIVE 1", "disease": [], "cellular_component": [ { "name": "nucleolar ribonuclease P complex", "id": "GO:0005655", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005655", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" } ], "biological_process": [ { "name": "tRNA processing", "id": "GO:0008033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008033", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" }, { "name": "pollen tube development", "id": "GO:0048868", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048868", "evidence": [ { "database": "UniProtKB", "id": "F4JXF1", "url": "https://www.uniprot.org/uniprotkb/F4JXF1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JXF1-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Ser378", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JXF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JXF1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JXF1-1", "start_pos": "508", "end_pos": "508", "site_lbl": "Ser508", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JXF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JXF1" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JXF1-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JXF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JXF1" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGU1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 959, "chemical_mass": 106058.0, "gene_names": "T25O11.15;T25O11_15", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g37450", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "C0LGU1", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Asn123", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 123, "start_aa": "Asn", "end_pos": 123, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn123", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "182", "end_pos": "182", "site_lbl": "Asn182", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 182, "start_aa": "Asn", "end_pos": 182, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn182", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Asn293", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 293, "start_aa": "Asn", "end_pos": 293, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn293", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "311", "end_pos": "311", "site_lbl": "Asn311", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 311, "start_aa": "Asn", "end_pos": 311, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn311", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "327", "end_pos": "327", "site_lbl": "Asn327", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 327, "start_aa": "Asn", "end_pos": 327, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn327", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "358", "end_pos": "358", "site_lbl": "Asn358", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 358, "start_aa": "Asn", "end_pos": 358, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn358", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Asn369", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 369, "start_aa": "Asn", "end_pos": 369, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn369", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "510", "end_pos": "510", "site_lbl": "Asn510", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 510, "start_aa": "Asn", "end_pos": 510, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn510", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "62", "end_pos": "62", "site_lbl": "Asn62", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 62, "start_aa": "Asn", "end_pos": 62, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn62", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "88", "end_pos": "88", "site_lbl": "Asn88", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 88, "start_aa": "Asn", "end_pos": 88, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn88", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "793", "end_pos": "793", "site_lbl": "Thr793", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGU1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGU1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "C0LGU1-1", "start_pos": "903", "end_pos": "903", "site_lbl": "Tyr903", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGU1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGU1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IH31-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 332, "chemical_mass": 37298.0, "gene_names": "ATCAN2;CAN2;AtCaN2;CAN2;Ca2+-dependent nuclease;T3G21.18;T3G21_18;calcium dependent nuclease 2", "protein_name": "Staphylococcal-like nuclease CAN2", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" }, { "name": "DNA endonuclease activity", "id": "GO:0004520", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004520", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA catabolic process", "id": "GO:0006308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006308", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" }, { "name": "RNA catabolic process", "id": "GO:0006401", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006401", "evidence": [ { "database": "UniProtKB", "id": "F4IH31", "url": "https://www.uniprot.org/uniprotkb/F4IH31" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGL4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 880, "chemical_mass": 98965.0, "gene_names": "T9I4.4;T9I4_4", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g28960", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "180", "end_pos": "180", "site_lbl": "Asn180", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 180, "start_aa": "Asn", "end_pos": 180, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn180", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "201", "end_pos": "201", "site_lbl": "Asn201", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 201, "start_aa": "Asn", "end_pos": 201, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn201", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "228", "end_pos": "228", "site_lbl": "Asn228", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 228, "start_aa": "Asn", "end_pos": 228, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn228", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Asn254", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 254, "start_aa": "Asn", "end_pos": 254, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn254", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "287", "end_pos": "287", "site_lbl": "Asn287", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 287, "start_aa": "Asn", "end_pos": 287, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn287", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "403", "end_pos": "403", "site_lbl": "Asn403", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 403, "start_aa": "Asn", "end_pos": 403, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn403", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "430", "end_pos": "430", "site_lbl": "Asn430", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 430, "start_aa": "Asn", "end_pos": 430, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn430", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Asn441", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 441, "start_aa": "Asn", "end_pos": 441, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn441", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "505", "end_pos": "505", "site_lbl": "Asn505", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 505, "start_aa": "Asn", "end_pos": 505, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn505", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "738", "end_pos": "738", "site_lbl": "Thr738", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 738, "start_aa": "Thr", "end_pos": 738, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr738", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "564", "end_pos": "564", "site_lbl": "Thr564", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "646", "end_pos": "646", "site_lbl": "Tyr646", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "732", "end_pos": "732", "site_lbl": "Ser732", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "733", "end_pos": "733", "site_lbl": "Thr733", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_canonical_ac": "C0LGL4-1", "start_pos": "746", "end_pos": "746", "site_lbl": "Tyr746", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL4", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JYC8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1706, "chemical_mass": 189210.0, "gene_names": "PTM;DDP1;K3D20.8;PHD type transcription factor with transmembrane domains;PTM;T25C13.90;T25C13_90", "protein_name": "DDT domain-containing protein PTM", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "ISWI-type complex", "id": "GO:0031010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031010", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "chloroplast outer membrane", "id": "GO:0009707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009707", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" }, { "name": "chloroplast-nucleus signaling pathway", "id": "GO:0010019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010019", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JYC8", "url": "https://www.uniprot.org/uniprotkb/F4JYC8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JYC8-1", "start_pos": "1324", "end_pos": "1324", "site_lbl": "Ser1324", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JYC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JYC8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HX15-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1309, "chemical_mass": 145222.0, "gene_names": "PLA1;F8K4.6;F8K4_6", "protein_name": "Phospholipase A I", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" } ], "biological_process": [ { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "response to fungus", "id": "GO:0009620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009620", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "jasmonic acid biosynthetic process", "id": "GO:0009695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009695", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" } ], "molecular_function": [ { "name": "phospholipase activity", "id": "GO:0004620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004620", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "monoacylglycerol lipase activity", "id": "GO:0047372", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047372", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" }, { "name": "galactolipase activity", "id": "GO:0047714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047714", "evidence": [ { "database": "UniProtKB", "id": "F4HX15", "url": "https://www.uniprot.org/uniprotkb/F4HX15" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HX15-1", "start_pos": "1168", "end_pos": "1168", "site_lbl": "Thr1168", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1168, "start_aa": "Thr", "end_pos": 1168, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1168", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HX15-1", "start_pos": "1000", "end_pos": "1000", "site_lbl": "Thr1000", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A2H1ZEE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A2H1ZEE1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HX15-1", "start_pos": "1003", "end_pos": "1003", "site_lbl": "Ser1003", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A2H1ZEE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A2H1ZEE1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HX15-1", "start_pos": "1006", "end_pos": "1006", "site_lbl": "Ser1006", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A2H1ZEE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A2H1ZEE1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HX15-1", "start_pos": "1007", "end_pos": "1007", "site_lbl": "Ser1007", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A2H1ZEE1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A2H1ZEE1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JCX9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 663, "chemical_mass": 73593.0, "gene_names": "LNK2;LNK2;T14E10.70;night light-inducible and clock-regulated 2", "protein_name": "Protein LNK2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" }, { "name": "circadian regulation of gene expression", "id": "GO:0032922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032922", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" }, { "name": "entrainment of circadian clock", "id": "GO:0009649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009649", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" }, { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4JCX9", "url": "https://www.uniprot.org/uniprotkb/F4JCX9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JCX9-1", "start_pos": "595", "end_pos": "595", "site_lbl": "Ser595", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JCX9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JCX9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JSE7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 718, "chemical_mass": 81847.0, "gene_names": "EDR2;EDR2;ENHANCED DISEASE RESISTANCE 2;F13C5.210;F13C5_210", "protein_name": "Protein ENHANCED DISEASE RESISTANCE 2", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphatidylinositol-4-phosphate binding", "id": "GO:0070273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070273", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" } ], "biological_process": [ { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "ethylene-activated signaling pathway", "id": "GO:0009873", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009873", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "negative regulation of leaf senescence", "id": "GO:1900056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900056", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "regulation of defense response to fungus", "id": "GO:1900150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900150", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4JSE7", "url": "https://www.uniprot.org/uniprotkb/F4JSE7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Thr137", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "140", "end_pos": "140", "site_lbl": "Ser140", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Ser141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "148", "end_pos": "148", "site_lbl": "Ser148", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Thr165", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Ser428", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Ser434", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSE7-1", "start_pos": "446", "end_pos": "446", "site_lbl": "Ser446", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSE7" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0JQ18-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 73, "chemical_mass": 7777.0, "gene_names": "PROSCOOP14;F19G10.22;F19G10_22;SCOOP14;STMP2", "protein_name": "Serine rich endogenous peptide 14", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" } ], "molecular_function": [ { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "A0JQ18", "url": "https://www.uniprot.org/uniprotkb/A0JQ18" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A0MES8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 328, "chemical_mass": 35671.0, "gene_names": "ABI4;ABA INSENSITIVE 4;ABI4;ABSCISIC ACID-INSENSITIVE PROTEIN 4;ATABI4;ERF052;GIN6;GLUCOSE INSENSITIVE 6;IMPAIRED SUCROSE INDUCTION 3;ISI3;SALOBRENO 5;SAN5;SIS5;SUCROSE UNCOUPLED 6;SUGAR-INSENSITIVE 5;SUN6;T7M7.16", "protein_name": "Ethylene-responsive transcription factor ABI4", "disease": [], "biological_process": [ { "name": "starch catabolic process", "id": "GO:0005983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005983", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "regulation of protein localization", "id": "GO:0032880", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032880", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to stress", "id": "GO:0006950", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006950", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to glucose", "id": "GO:0009749", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009749", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to sucrose", "id": "GO:0009744", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009744", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "mitochondria-nucleus signaling pathway", "id": "GO:0031930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031930", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "response to trehalose", "id": "GO:0010353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010353", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "ethylene-activated signaling pathway", "id": "GO:0009873", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009873", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "regulation of stomatal movement", "id": "GO:0010119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010119", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "sugar mediated signaling pathway", "id": "GO:0010182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010182", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "root meristem growth", "id": "GO:0010449", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010449", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "regulation of triglyceride catabolic process", "id": "GO:0010896", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010896", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "regulation of L-ascorbic acid biosynthetic process", "id": "GO:2000082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000082", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A0MES8-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Glu69", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "K", "comment": "In abi4-104/sis5-4; impaired ABA signaling pathway in response to sucrose.", "evidence": [ { "database": "UniProtKB", "id": "A0MES8", "url": "https://www.uniprot.org/uniprotkb/A0MES8" }, { "database": "PubMed", "id": "10972885", "url": "https://glygen.org/publication/PubMed/10972885" }, { "database": "PubMed", "id": "11439129", "url": "https://glygen.org/publication/PubMed/11439129" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A1A6H3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 379, "chemical_mass": 40189.0, "gene_names": "RBSK;F20D23.14;F20D23_14", "protein_name": "Ribokinase", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "ribokinase activity", "id": "GO:0004747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004747", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "plastid nucleoid", "id": "GO:0042646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042646", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" } ], "biological_process": [ { "name": "nucleoside metabolic process", "id": "GO:0009116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009116", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" }, { "name": "D-ribose catabolic process", "id": "GO:0019303", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019303", "evidence": [ { "database": "UniProtKB", "id": "A1A6H3", "url": "https://www.uniprot.org/uniprotkb/A1A6H3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A2RVJ8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 434, "chemical_mass": 50517.0, "gene_names": "HIT4;HEAT INTOLERANT 4;HIT4;T31P16.7;T31P16_7", "protein_name": "Protein HEAT INTOLERANT 4", "disease": [], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "chromocenter", "id": "GO:0010369", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010369", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of cellular response to heat", "id": "GO:1900034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900034", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "heat acclimation", "id": "GO:0010286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010286", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" }, { "name": "negative regulation of heterochromatin formation", "id": "GO:0031452", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031452", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Thr22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "255", "end_pos": "255", "site_lbl": "Tyr255", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Ser389", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "392", "end_pos": "392", "site_lbl": "Thr392", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "39", "end_pos": "39", "site_lbl": "Ser39", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "73", "end_pos": "73", "site_lbl": "Ser73", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A2RVJ8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A2RVJ8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "A2RVJ8-1", "start_pos": "227", "end_pos": "227", "site_lbl": "Ser227", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "Y", "comment": "In hit4-1; hypersensitivity to heat leading to the inability to withstand prolonged heat stress (4 days at 37 degrees Celsius). Reduced relocation from the chromocenter to the nucleolus in response to heat resulting in insufficient decompaction of chromocenters and impaired reactivation of transcriptional gene silencing (TGS).", "evidence": [ { "database": "UniProtKB", "id": "A2RVJ8", "url": "https://www.uniprot.org/uniprotkb/A2RVJ8" }, { "database": "PubMed", "id": "25329561", "url": "https://glygen.org/publication/PubMed/25329561" }, { "database": "PubMed", "id": "23408827", "url": "https://glygen.org/publication/PubMed/23408827" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A3EWL3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1105, "chemical_mass": 122233.0, "gene_names": "REV1;ARABIDOPSIS THALIANA HOMOLOG OF REVERSIONLESS 1;ATREV1;K23L20.9;K23L20_9;REV1;T19K24.14", "protein_name": "Translesion synthesis protein REV1", "disease": [], "molecular_function": [ { "name": "DNA-directed DNA polymerase activity", "id": "GO:0003887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003887", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "damaged DNA binding", "id": "GO:0003684", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003684", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "deoxycytidyl transferase activity", "id": "GO:0017125", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017125", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "site of double-strand break", "id": "GO:0035861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035861", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "error-prone translesion synthesis", "id": "GO:0042276", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042276", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "response to UV-B", "id": "GO:0010224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010224", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" }, { "name": "error-free translesion synthesis", "id": "GO:0070987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070987", "evidence": [ { "database": "UniProtKB", "id": "A3EWL3", "url": "https://www.uniprot.org/uniprotkb/A3EWL3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A3KPF2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 528, "chemical_mass": 58857.0, "gene_names": "PRMT14;ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4A;ATPRMT4A;CARM1B;K19E20.17;K19E20_17;PRMT4A;protein arginine methyltransferase 4A", "protein_name": "Probable histone-arginine methyltransferase 1.4", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "peptidyl-arginine methylation, to asymmetrical-dimethyl arginine", "id": "GO:0019919", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019919", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "protein-arginine N-methyltransferase activity", "id": "GO:0016274", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016274", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "protein-arginine omega-N asymmetric methyltransferase activity", "id": "GO:0035242", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035242", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "protein-arginine omega-N monomethyltransferase activity", "id": "GO:0035241", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035241", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "histone H3R2 methyltransferase activity", "id": "GO:0070611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070611", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "histone H3R17 methyltransferase activity", "id": "GO:0035642", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035642", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" }, { "name": "histone H3R26 methyltransferase activity", "id": "GO:0140903", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140903", "evidence": [ { "database": "UniProtKB", "id": "A3KPF2", "url": "https://www.uniprot.org/uniprotkb/A3KPF2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A3KPF2-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Ser137", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A3KPF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A3KPF2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A4GNA8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 635, "chemical_mass": 70352.0, "gene_names": "PSD3;F20B18.80;F20B18_80;PSD3;phosphatidylserine decarboxylase 3", "protein_name": "Phosphatidylserine decarboxylase proenzyme 3", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" }, { "name": "phosphatidylserine decarboxylase activity", "id": "GO:0004609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004609", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" } ], "biological_process": [ { "name": "protein autoprocessing", "id": "GO:0016540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016540", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" }, { "name": "phosphatidylethanolamine biosynthetic process", "id": "GO:0006646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006646", "evidence": [ { "database": "UniProtKB", "id": "A4GNA8", "url": "https://www.uniprot.org/uniprotkb/A4GNA8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A4GNA8-1", "start_pos": "31", "end_pos": "31", "site_lbl": "Ser31", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GNA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GNA8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A4GNA8-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Ser35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GNA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GNA8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GNA8-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Ser37", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GNA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GNA8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A4GNA8-1", "start_pos": "39", "end_pos": "39", "site_lbl": "Ser39", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GNA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GNA8" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A4GNA8-1", "start_pos": "43", "end_pos": "43", "site_lbl": "Ser43", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GNA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GNA8" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A4GSN8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2093, "chemical_mass": 237040.0, "gene_names": "NUA;AtTPR;NUA;TPR;TRANSLOCATED PROMOTER REGION;YUP8H12R.11;YUP8H12R.12;YUP8H12R.8;YUP8H12R.9;YUP8H12R_12;nuclear pore anchor", "protein_name": "Nuclear-pore anchor", "disease": [], "biological_process": [ { "name": "poly(A)+ mRNA export from nucleus", "id": "GO:0016973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016973", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "mRNA export from nucleus", "id": "GO:0006406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006406", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "negative regulation of protein sumoylation", "id": "GO:0033234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033234", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "protein import into nucleus", "id": "GO:0006606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "negative regulation of flower development", "id": "GO:0009910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009910", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "stamen development", "id": "GO:0048443", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048443", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" } ], "molecular_function": [ { "name": "structural constituent of nuclear pore", "id": "GO:0017056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017056", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1466", "end_pos": "1466", "site_lbl": "Ser1466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19341826", "url": "https://glygen.org/publication/PubMed/19341826" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1659", "end_pos": "1659", "site_lbl": "Ser1659", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1666", "end_pos": "1666", "site_lbl": "Ser1666", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1911", "end_pos": "1911", "site_lbl": "Ser1911", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1921", "end_pos": "1921", "site_lbl": "Thr1921", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1924", "end_pos": "1924", "site_lbl": "Thr1924", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1926", "end_pos": "1926", "site_lbl": "Thr1926", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1928", "end_pos": "1928", "site_lbl": "Ser1928", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1930", "end_pos": "1930", "site_lbl": "Ser1930", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "1934", "end_pos": "1934", "site_lbl": "Thr1934", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2022", "end_pos": "2022", "site_lbl": "Ser2022", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A4GSN8", "url": "https://www.uniprot.org/uniprotkb/A4GSN8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2027", "end_pos": "2027", "site_lbl": "Ser2027", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2028", "end_pos": "2028", "site_lbl": "Ser2028", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2029", "end_pos": "2029", "site_lbl": "Thr2029", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2032", "end_pos": "2032", "site_lbl": "Thr2032", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "2065", "end_pos": "2065", "site_lbl": "Thr2065", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "589", "end_pos": "589", "site_lbl": "Ser589", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "594", "end_pos": "594", "site_lbl": "Ser594", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "611", "end_pos": "611", "site_lbl": "Thr611", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "620", "end_pos": "620", "site_lbl": "Thr620", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "659", "end_pos": "659", "site_lbl": "Ser659", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A4GSN8-1", "start_pos": "663", "end_pos": "663", "site_lbl": "Ser663", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A4GSN8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A4GSN8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A5HEI1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1846, "chemical_mass": 206759.0, "gene_names": "SCC2;ARABIDOPSIS THALIANA SISTER-CHROMATID COHESION 2;ATSCC2;EMB2773;EMBRYO DEFECTIVE 2773;SCC2;SISTER-CHROMATID COHESION 2;T20K14.150;T20K14_150", "protein_name": "Sister chromatid cohesion protein SCC2", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "cohesin loader activity", "id": "GO:0061775", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061775", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "chromosome, centromeric region", "id": "GO:0000775", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000775", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "Scc2-Scc4 cohesin loading complex", "id": "GO:0090694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090694", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" } ], "biological_process": [ { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "establishment of mitotic sister chromatid cohesion", "id": "GO:0034087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034087", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "meiotic cell cycle", "id": "GO:0051321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051321", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "sister chromatid cohesion", "id": "GO:0007062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007062", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "establishment of protein localization to chromatin", "id": "GO:0071169", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071169", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "meiotic sister chromatid cohesion", "id": "GO:0051177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051177", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "replication-born double-strand break repair via sister chromatid exchange", "id": "GO:1990414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990414", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "chromatin looping", "id": "GO:0140588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140588", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "A5HEI1", "url": "https://www.uniprot.org/uniprotkb/A5HEI1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A5HEI1-1", "start_pos": "125", "end_pos": "125", "site_lbl": "Thr125", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 125, "start_aa": "Thr", "end_pos": 125, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr125", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A5HEI1-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Thr129", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 129, "start_aa": "Thr", "end_pos": 129, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr129", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A5HEI1-1", "start_pos": "1254", "end_pos": "1254", "site_lbl": "Ser1254", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A5HEI1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A5HEI1" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A7WM73-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 541, "chemical_mass": 61230.0, "gene_names": "HEXO1;ATHEX2;HEX2;HEXO1;T26I12.140;beta-hexosaminidase 1", "protein_name": "Beta-hexosaminidase 1", "disease": [], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "glycosaminoglycan metabolic process", "id": "GO:0030203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030203", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "N-glycan processing", "id": "GO:0006491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006491", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" } ], "molecular_function": [ { "name": "hexosaminidase activity", "id": "GO:0015929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015929", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" }, { "name": "beta-N-acetylhexosaminidase activity", "id": "GO:0004563", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004563", "evidence": [ { "database": "UniProtKB", "id": "A7WM73", "url": "https://www.uniprot.org/uniprotkb/A7WM73" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Thr23", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 23, "start_aa": "Thr", "end_pos": 23, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr23", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "304", "end_pos": "304", "site_lbl": "Asn304", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 304, "start_aa": "Asn", "end_pos": 304, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn304", "evidence": [ { "id": "A7WM73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7WM73#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "340", "end_pos": "340", "site_lbl": "Asn340", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 340, "start_aa": "Asn", "end_pos": 340, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn340", "evidence": [ { "id": "A7WM73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7WM73#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "352", "end_pos": "352", "site_lbl": "Asn352", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 352, "start_aa": "Asn", "end_pos": 352, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn352", "evidence": [ { "id": "A7WM73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7WM73#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "44", "end_pos": "44", "site_lbl": "Asn44", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 44, "start_aa": "Asn", "end_pos": 44, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn44", "evidence": [ { "id": "A7WM73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7WM73#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7WM73-1", "start_pos": "497", "end_pos": "497", "site_lbl": "Asn497", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 497, "start_aa": "Asn", "end_pos": 497, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn497", "evidence": [ { "id": "A7WM73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7WM73#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A7XDQ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 684, "chemical_mass": 77912.0, "gene_names": "GALT2;AGP galactosyltransferase 2;AtGALT2;B3GALT20;GALT2;T13K14.220;T13K14_220", "protein_name": "Hydroxyproline O-galactosyltransferase GALT2", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" } ], "biological_process": [ { "name": "protein O-linked glycosylation", "id": "GO:0006493", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006493", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "pollen wall assembly", "id": "GO:0010208", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010208", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "arabinogalactan protein metabolic process", "id": "GO:0010405", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010405", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "root hair cell development", "id": "GO:0080147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080147", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "protein O-linked glycosylation via galactose", "id": "GO:0180062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0180062", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "glycoprotein biosynthetic process", "id": "GO:0009101", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009101", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" } ], "molecular_function": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "UDP-galactosyltransferase activity", "id": "GO:0035250", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035250", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" }, { "name": "hydroxyproline O-galactosyltransferase activity", "id": "GO:1990714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990714", "evidence": [ { "database": "UniProtKB", "id": "A7XDQ9", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A7XDQ9-1", "start_pos": "103", "end_pos": "103", "site_lbl": "Asn103", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 103, "start_aa": "Asn", "end_pos": 103, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn103", "evidence": [ { "id": "A7XDQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7XDQ9-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Asn127", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 127, "start_aa": "Asn", "end_pos": 127, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn127", "evidence": [ { "id": "A7XDQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7XDQ9-1", "start_pos": "162", "end_pos": "162", "site_lbl": "Asn162", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 162, "start_aa": "Asn", "end_pos": 162, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn162", "evidence": [ { "id": "A7XDQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7XDQ9-1", "start_pos": "524", "end_pos": "524", "site_lbl": "Asn524", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 524, "start_aa": "Asn", "end_pos": 524, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn524", "evidence": [ { "id": "A7XDQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A7XDQ9-1", "start_pos": "632", "end_pos": "632", "site_lbl": "Asn632", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 632, "start_aa": "Asn", "end_pos": 632, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn632", "evidence": [ { "id": "A7XDQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A7XDQ9#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MQA5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 90, "chemical_mass": 10283.0, "gene_names": "ESF1.3;EMBRYO SURROUNDING FACTORS 1.3;ESF1.3;F20B24;MEG1.3;T16B5", "protein_name": "EMBRYO SURROUNDING FACTOR 1.3", "disease": [], "biological_process": [ { "name": "embryonic axis specification", "id": "GO:0000578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000578", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" } ], "pmid": "" }, { "name": "suspensor development", "id": "GO:0010098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010098", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Cys41", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-58-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "46", "end_pos": "46", "site_lbl": "Cys46", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-86-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Cys56", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-82-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Trp57", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "No effect on topology, but loss of activity; when associated with A-70.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "58", "end_pos": "58", "site_lbl": "Cys58", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-41-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "59", "end_pos": "59", "site_lbl": "Cys59", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-69-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Cys69", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-59-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "70", "end_pos": "70", "site_lbl": "Trp70", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "No effect on topology, but loss of activity; when associated with A-57.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Cys82", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-56-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] }, { "uniprot_canonical_ac": "A8MQA5-1", "start_pos": "86", "end_pos": "86", "site_lbl": "Cys86", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-46-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://glygen.org/publication/PubMed/24723605" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MQN2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 616, "chemical_mass": 68181.0, "gene_names": "LNK1;LNK1;MHJ24.1;MHJ24_1;night light-inducible and clock-regulated 1", "protein_name": "Protein LNK1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" }, { "name": "circadian regulation of gene expression", "id": "GO:0032922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032922", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" }, { "name": "entrainment of circadian clock", "id": "GO:0009649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009649", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" }, { "name": "DNA-templated transcription elongation", "id": "GO:0006354", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006354", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA polymerase binding", "id": "GO:0070063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070063", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "A8MQN2", "url": "https://www.uniprot.org/uniprotkb/A8MQN2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MQN2-1", "start_pos": "270", "end_pos": "270", "site_lbl": "Ser270", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQN2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MQN2-1", "start_pos": "421", "end_pos": "421", "site_lbl": "Ser421", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQN2" } ] } ] }, { "uniprot_canonical_ac": "A8MQN2-1", "start_pos": "590", "end_pos": "590", "site_lbl": "Ser590", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MQN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MQN2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "E3VNM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 460, "chemical_mass": 51167.0, "gene_names": "TGA10;BZIP65;MOJ9.1;TGA10;TGACG (TGA) motif-binding protein 10;bZIP65", "protein_name": "Transcription factor TGA10", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" }, { "name": "response to molecule of bacterial origin", "id": "GO:0002237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002237", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" }, { "name": "hydrogen peroxide mediated signaling pathway", "id": "GO:0071588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071588", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "E3VNM4", "url": "https://www.uniprot.org/uniprotkb/E3VNM4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "E3VNM4-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Ser20", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "E3VNM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/E3VNM4" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MR65-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 201, "chemical_mass": 22376.0, "gene_names": "FHL;FHL;T7H20.250;T7H20_250;far-red-elongated hypocotyl1-like", "protein_name": "Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "maintenance of protein location in nucleus", "id": "GO:0051457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051457", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "regulatory ncRNA-mediated heterochromatin formation", "id": "GO:0031048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031048", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "response to blue light", "id": "GO:0009637", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009637", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "response to far red light", "id": "GO:0010218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010218", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" }, { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "A8MR65", "url": "https://www.uniprot.org/uniprotkb/A8MR65" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MR65-1", "start_pos": "27", "end_pos": "27", "site_lbl": "Ser27", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MR65", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MR65" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "A8MR65-1", "start_pos": "31", "end_pos": "31", "site_lbl": "Ser31", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MR65", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MR65" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MR93-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 497, "chemical_mass": 57192.0, "gene_names": "ALG12;ALG12;EBS4;EMS-MUTAGENIZED BRI1(BRASSINOSTEROID INSENSITIVE 1) SUPPRESSOR 4;T6A9;homolog of asparagine-linked glycosylation 12", "protein_name": "Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "pmid": "" } ], "biological_process": [ { "name": "protein N-linked glycosylation", "id": "GO:0006487", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006487", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "pmid": "" }, { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "pmid": "" } ], "molecular_function": [ { "name": "alpha-1,6-mannosyltransferase activity", "id": "GO:0000009", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000009", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "pmid": "" }, { "name": "dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity", "id": "GO:0052917", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052917", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MR93-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Asn253", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 253, "start_aa": "Asn", "end_pos": 253, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn253", "evidence": [ { "id": "A8MR93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8MR93#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A8MR93-1", "start_pos": "435", "end_pos": "435", "site_lbl": "Asn435", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 435, "start_aa": "Asn", "end_pos": 435, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn435", "evidence": [ { "id": "A8MR93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8MR93#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "A8MR93-1", "start_pos": "307", "end_pos": "307", "site_lbl": "Ser307", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "P", "comment": "In ebs4-2; incomplete assembly of glycans and compromised endoplasmic reticulum-associated degradation (ERAD) of defective proteins.", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" }, { "database": "PubMed", "id": "20023196", "url": "https://glygen.org/publication/PubMed/20023196" } ] } ] }, { "uniprot_canonical_ac": "A8MR93-1", "start_pos": "38", "end_pos": "38", "site_lbl": "Glu38", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "K", "comment": "In ebs4-3; incomplete assembly of glycans and compromised endoplasmic reticulum-associated degradation (ERAD) of defective proteins.", "evidence": [ { "database": "UniProtKB", "id": "A8MR93", "url": "https://www.uniprot.org/uniprotkb/A8MR93" }, { "database": "PubMed", "id": "20023196", "url": "https://glygen.org/publication/PubMed/20023196" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0Z2L5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 173, "chemical_mass": 19073.0, "gene_names": "BZIP44;AtbZIP44;F1B16.8;F1B16_8;bZIP44;basic leucine-zipper 44", "protein_name": "bZIP transcription factor 44", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "C0Z2L5", "url": "https://www.uniprot.org/uniprotkb/C0Z2L5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MRX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 459, "chemical_mass": 52104.0, "gene_names": "FMOGS-OX5;T28K15.12", "protein_name": "Flavin-containing monooxygenase FMO GS-OX5", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" } ], "molecular_function": [ { "name": "flavin adenine dinucleotide binding", "id": "GO:0050660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050660", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "NADP binding", "id": "GO:0050661", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050661", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "monooxygenase activity", "id": "GO:0004497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004497", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "N,N-dimethylaniline monooxygenase activity", "id": "GO:0004499", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004499", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "8-methylthiopropyl glucosinolate S-oxygenase activity", "id": "GO:0080107", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080107", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of organ growth", "id": "GO:0046620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046620", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "regulation of hormone biosynthetic process", "id": "GO:0046885", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046885", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "glucosinolate biosynthetic process", "id": "GO:0019761", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019761", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" }, { "name": "floral organ morphogenesis", "id": "GO:0048444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048444", "evidence": [ { "database": "UniProtKB", "id": "A8MRX0", "url": "https://www.uniprot.org/uniprotkb/A8MRX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MS68-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 623, "chemical_mass": 66661.0, "gene_names": "LPD1;K14A17.6;LIPOAMIDE DEHYDROGENASE;LPD1;lipoamide dehydrogenase 1;ptlpd1", "protein_name": "Dihydrolipoyl dehydrogenase 1, chloroplastic", "disease": [], "biological_process": [ { "name": "response to arsenic-containing substance", "id": "GO:0046685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046685", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "2-oxoglutarate metabolic process", "id": "GO:0006103", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006103", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "pyruvate decarboxylation to acetyl-CoA", "id": "GO:0006086", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006086", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "oxoglutarate dehydrogenase complex", "id": "GO:0045252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045252", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" } ], "molecular_function": [ { "name": "flavin adenine dinucleotide binding", "id": "GO:0050660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050660", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" }, { "name": "dihydrolipoyl dehydrogenase (NADH) activity", "id": "GO:0004148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004148", "evidence": [ { "database": "UniProtKB", "id": "A8MS68", "url": "https://www.uniprot.org/uniprotkb/A8MS68" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MS68-1", "start_pos": "426", "end_pos": "426", "site_lbl": "Ser426", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS68", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS68" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8MS85-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1647, "chemical_mass": 185034.0, "gene_names": "GTB1;SPT6;GLOBAL TRANSCRIPTION FACTOR GROUP B;GTB1;SPT6L;T8F5.22;T8F5_22;global transcription factor group B1", "protein_name": "Transcription elongation factor SPT6 homolog", "disease": [], "biological_process": [ { "name": "nucleosome organization", "id": "GO:0034728", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034728", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "transcription elongation by RNA polymerase II", "id": "GO:0006368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006368", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "transcription elongation-coupled chromatin remodeling", "id": "GO:0140673", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140673", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "transcription elongation factor complex", "id": "GO:0008023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008023", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" } ], "molecular_function": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "translation elongation factor activity", "id": "GO:0003746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003746", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" }, { "name": "nucleosome binding", "id": "GO:0031491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031491", "evidence": [ { "database": "UniProtKB", "id": "A8MS85", "url": "https://www.uniprot.org/uniprotkb/A8MS85" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8MS85-1", "start_pos": "1012", "end_pos": "1012", "site_lbl": "Tyr1012", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS85" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "A8MS85-1", "start_pos": "1020", "end_pos": "1020", "site_lbl": "Ser1020", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS85" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A8MS85-1", "start_pos": "126", "end_pos": "126", "site_lbl": "Ser126", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS85" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MS85-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Ser127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS85" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8MS85-1", "start_pos": "1432", "end_pos": "1432", "site_lbl": "Ser1432", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8MS85", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8MS85" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8R7E6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 617, "chemical_mass": 67315.0, "gene_names": "CERK1;AtCERK1;AtLYK1;CERK1;LYK1;LYSM DOMAIN RECEPTOR-LIKE KINASE 1;LYSM RLK1;LysM-containing receptor-like kinase 1;MIL23.20;RLK1;chitin elicitor receptor kinase 1", "protein_name": "Chitin elicitor receptor kinase 1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "chitin binding", "id": "GO:0008061", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008061", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "transmembrane receptor protein kinase activity", "id": "GO:0019199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019199", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "chitosan binding", "id": "GO:2001080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001080", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" } ], "biological_process": [ { "name": "protein phosphorylation", "id": "GO:0006468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006468", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "cellular response to molecule of bacterial origin", "id": "GO:0071219", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071219", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "cell surface pattern recognition receptor signaling pathway", "id": "GO:0002752", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002752", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "detection of peptidoglycan", "id": "GO:0032499", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032499", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "detection of molecule of fungal origin", "id": "GO:0032491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032491", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "response to chitin", "id": "GO:0010200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010200", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" }, { "name": "cellular response to chitin", "id": "GO:0071323", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071323", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "A8R7E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8R7E6#ptm_processing" }, { "id": "22654057", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/22654057" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/sequence/4EBY" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "123", "end_pos": "123", "site_lbl": "Asn123", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 123, "start_aa": "Asn", "end_pos": 123, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn123", "evidence": [ { "id": "A8R7E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8R7E6#ptm_processing" }, { "id": "22654057", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/22654057" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/sequence/4EBY" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "152", "end_pos": "152", "site_lbl": "Asn152", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 152, "start_aa": "Asn", "end_pos": 152, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn152", "evidence": [ { "id": "A8R7E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8R7E6#ptm_processing" }, { "id": "22654057", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/22654057" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/sequence/4EBY" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Asn40", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 40, "start_aa": "Asn", "end_pos": 40, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn40", "evidence": [ { "id": "A8R7E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8R7E6#ptm_processing" }, { "id": "22654057", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/22654057" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/sequence/4EBY" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/structure/4EBY" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/structure/4EBY" }, { "id": "4EBY|A|40", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Asn52", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 52, "start_aa": "Asn", "end_pos": 52, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn52", "evidence": [ { "id": "A8R7E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A8R7E6#ptm_processing" }, { "id": "22654057", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/22654057" }, { "id": "4EBY", "database": "PDB", "url": "https://www.rcsb.org/sequence/4EBY" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Ser266", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "20610395", "url": "https://glygen.org/publication/PubMed/20610395" }, { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "268", "end_pos": "268", "site_lbl": "Ser268", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "20610395", "url": "https://glygen.org/publication/PubMed/20610395" }, { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "270", "end_pos": "270", "site_lbl": "Ser270", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "274", "end_pos": "274", "site_lbl": "Ser274", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "20610395", "url": "https://glygen.org/publication/PubMed/20610395" }, { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Ser281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "287", "end_pos": "287", "site_lbl": "Ser287", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "390", "end_pos": "390", "site_lbl": "Tyr390", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Tyr428", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "27565204", "url": "https://glygen.org/publication/PubMed/27565204" }, { "database": "PubMed", "id": "29388878", "url": "https://glygen.org/publication/PubMed/29388878" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Thr466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "479", "end_pos": "479", "site_lbl": "Thr479", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "27565204", "url": "https://glygen.org/publication/PubMed/27565204" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "493", "end_pos": "493", "site_lbl": "Ser493", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "31119298", "url": "https://glygen.org/publication/PubMed/31119298" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "519", "end_pos": "519", "site_lbl": "Thr519", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "20610395", "url": "https://glygen.org/publication/PubMed/20610395" }, { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "573", "end_pos": "573", "site_lbl": "Thr573", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A8R7E6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A8R7E6" }, { "database": "PubMed", "id": "27565204", "url": "https://glygen.org/publication/PubMed/27565204" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Ala138", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "H", "comment": "Slower chitin-mediated phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "22654057", "url": "https://glygen.org/publication/PubMed/22654057" } ] } ] }, { "uniprot_canonical_ac": "A8R7E6-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Asp441", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "V", "comment": "Increased affinity for PBL27.", "evidence": [ { "database": "UniProtKB", "id": "A8R7E6", "url": "https://www.uniprot.org/uniprotkb/A8R7E6" }, { "database": "PubMed", "id": "24750441", "url": "https://glygen.org/publication/PubMed/24750441" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A8R7K9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 790, "chemical_mass": 89405.0, "gene_names": "VPS35C;F24M12.350;VPS35 homolog C;VPS35C", "protein_name": "Vacuolar protein sorting-associated protein 35C", "disease": [], "cellular_component": [ { "name": "retromer, cargo-selective complex", "id": "GO:0030906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030906", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "multivesicular body", "id": "GO:0005771", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005771", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "retromer complex", "id": "GO:0030904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030904", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" }, { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "A8R7K9", "url": "https://www.uniprot.org/uniprotkb/A8R7K9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "A9LLI7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 870, "chemical_mass": 97889.0, "gene_names": "RRP6L2;MIK22.22;MIK22_22", "protein_name": "Protein RRP6-like 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear exosome (RNase complex)", "id": "GO:0000176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000176", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" } ], "molecular_function": [ { "name": "nucleotide binding", "id": "GO:0000166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000166", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "single-stranded RNA binding", "id": "GO:0003727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003727", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "3'-5'-RNA exonuclease activity", "id": "GO:0000175", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000175", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" } ], "biological_process": [ { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "histone mRNA catabolic process", "id": "GO:0071044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071044", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "id": "GO:0000467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000467", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent rRNA catabolic process", "id": "GO:0071035", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071035", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "TRAMP-dependent tRNA surveillance pathway", "id": "GO:0071038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071038", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "poly(A)-dependent snoRNA 3'-end processing", "id": "GO:0071051", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071051", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent snoRNA catabolic process", "id": "GO:0071036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071036", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent snRNA catabolic process", "id": "GO:0071037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071037", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent CUT catabolic process", "id": "GO:0071039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071039", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "nuclear polyadenylation-dependent antisense transcript catabolic process", "id": "GO:0071040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071040", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "gene silencing by siRNA-directed DNA methylation", "id": "GO:0080188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080188", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" }, { "name": "polyadenylation-dependent RNA catabolic process", "id": "GO:0043633", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043633", "evidence": [ { "database": "UniProtKB", "id": "A9LLI7", "url": "https://www.uniprot.org/uniprotkb/A9LLI7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "544", "end_pos": "544", "site_lbl": "Ser544", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" } ] } ] }, { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Ser570", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "595", "end_pos": "595", "site_lbl": "Ser595", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "657", "end_pos": "657", "site_lbl": "Ser657", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "732", "end_pos": "732", "site_lbl": "Ser732", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "A9LLI7-1", "start_pos": "742", "end_pos": "742", "site_lbl": "Ser742", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A9LLI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A9LLI7" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B0F481-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 833, "chemical_mass": 91935.0, "gene_names": "BIO3-BIO1;BIO1;BIO3;BioA;MUA2.17;MUA2.18;MUA2_17;biotin auxotroph 1", "protein_name": "Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial", "disease": [], "molecular_function": [ { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "adenosylmethionine-8-amino-7-oxononanoate transaminase activity", "id": "GO:0004015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004015", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "dethiobiotin synthase activity", "id": "GO:0004141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004141", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" } ], "biological_process": [ { "name": "biotin biosynthetic process", "id": "GO:0009102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009102", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B0F481-1", "start_pos": "348", "end_pos": "348", "site_lbl": "Phe348", "weight": 0.0, "mutagenesis": [ { "sequence_org": "F", "sequence_mut": "Y", "comment": "No important impact on the enzyme kinetic parameters.", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" }, { "database": "PubMed", "id": "22547782", "url": "https://glygen.org/publication/PubMed/22547782" } ] } ] }, { "uniprot_canonical_ac": "B0F481-1", "start_pos": "382", "end_pos": "382", "site_lbl": "Ser382", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "Y", "comment": "Reduced substrate channeling leading to slower 7,8-diamino-pelargonic acid aminotransferase + dethiobiotin synthetase activities.", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" }, { "database": "PubMed", "id": "22547782", "url": "https://glygen.org/publication/PubMed/22547782" } ] } ] }, { "uniprot_canonical_ac": "B0F481-1", "start_pos": "815", "end_pos": "815", "site_lbl": "Ile815", "weight": 0.0, "mutagenesis": [ { "sequence_org": "I", "sequence_mut": "W", "comment": "Reduced substrate channeling leading to slower 7,8-diamino-pelargonic acid aminotransferase + dethiobiotin synthetase activities.", "evidence": [ { "database": "UniProtKB", "id": "B0F481", "url": "https://www.uniprot.org/uniprotkb/B0F481" }, { "database": "PubMed", "id": "22547782", "url": "https://glygen.org/publication/PubMed/22547782" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B0F9L4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 914, "chemical_mass": 101834.0, "gene_names": "GC6;GC6;MAG4;MAIGO 4;MMJ24.8;MMJ24_7;golgin candidate 6", "protein_name": "Golgin candidate 6", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "ER to Golgi transport vesicle membrane", "id": "GO:0012507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012507", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "Golgi stack", "id": "GO:0005795", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005795", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "endoplasmic reticulum to Golgi vesicle-mediated transport", "id": "GO:0006888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006888", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "post-embryonic development", "id": "GO:0009791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009791", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "membrane fusion", "id": "GO:0061025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061025", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "Golgi vesicle docking", "id": "GO:0048211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048211", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "vesicle fusion with Golgi apparatus", "id": "GO:0048280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048280", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" }, { "name": "protein exit from endoplasmic reticulum", "id": "GO:0032527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032527", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "638", "end_pos": "638", "site_lbl": "Thr638", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 638, "start_aa": "Thr", "end_pos": 638, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr638", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "245", "end_pos": "245", "site_lbl": "Ser245", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "405", "end_pos": "405", "site_lbl": "Thr405", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "506", "end_pos": "506", "site_lbl": "Ser506", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "507", "end_pos": "507", "site_lbl": "Ser507", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "636", "end_pos": "636", "site_lbl": "Thr636", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "905", "end_pos": "905", "site_lbl": "Ser905", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "B0F9L4-1", "start_pos": "911", "end_pos": "911", "site_lbl": "Ser911", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B0F9L4", "url": "https://www.uniprot.org/uniprotkb/B0F9L4" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "B0F9L4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B0F9L4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3DNN5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 543, "chemical_mass": 61762.0, "gene_names": "APC6;APC6;CDC16;F9K20.19;F9K20_19;anaphase promoting complex 6", "protein_name": "Anaphase-promoting complex subunit 6", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "anaphase-promoting complex", "id": "GO:0005680", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005680", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" } ], "biological_process": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "anaphase-promoting complex-dependent catabolic process", "id": "GO:0031145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031145", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "positive regulation of mitotic metaphase/anaphase transition", "id": "GO:0045842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045842", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "regulation of DNA endoreduplication", "id": "GO:0032875", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032875", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" }, { "name": "phloem or xylem histogenesis", "id": "GO:0010087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010087", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" } ], "molecular_function": [ { "name": "enzyme-substrate adaptor activity", "id": "GO:0140767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140767", "evidence": [ { "database": "UniProtKB", "id": "B3DNN5", "url": "https://www.uniprot.org/uniprotkb/B3DNN5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3GS44-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 165, "chemical_mass": 18337.0, "gene_names": "LRE;LORELEI;LRE;M3E9", "protein_name": "GPI-anchored protein LORELEI", "disease": [], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" } ], "biological_process": [ { "name": "double fertilization forming a zygote and endosperm", "id": "GO:0009567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009567", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" }, { "name": "pollen tube guidance", "id": "GO:0010183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010183", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" }, { "name": "pollen tube reception", "id": "GO:0010483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010483", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" }, { "name": "synergid death", "id": "GO:0010198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010198", "evidence": [ { "database": "UniProtKB", "id": "B3GS44", "url": "https://www.uniprot.org/uniprotkb/B3GS44" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3GS44-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Asn137", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 137, "start_aa": "Asn", "end_pos": 137, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn137", "evidence": [ { "id": "B3GS44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/B3GS44#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H4Y2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 80, "chemical_mass": 8663.0, "gene_names": "STMP3;F5I14", "protein_name": "Secreted transmembrane peptide 3", "disease": [], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "perinuclear endoplasmic reticulum", "id": "GO:0097038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097038", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" } ], "biological_process": [ { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" } ], "molecular_function": [ { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "B3H4Y2", "url": "https://www.uniprot.org/uniprotkb/B3H4Y2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H5A8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 372, "chemical_mass": 41542.0, "gene_names": "RVE7;EARLY-PHYTOCHROME-RESPONSIVE1;EPR1;F15H18.16;F15H18_16;REVEILLE 7;RVE7", "protein_name": "Protein REVEILLE 7", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" }, { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "B3H5A8", "url": "https://www.uniprot.org/uniprotkb/B3H5A8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H5A9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 101, "chemical_mass": 11222.0, "gene_names": "CEP6;MUD21", "protein_name": "Precursor of CEP6", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" } ], "molecular_function": [ { "name": "hormone activity", "id": "GO:0005179", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005179", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" } ], "biological_process": [ { "name": "cellular response to nitrogen starvation", "id": "GO:0006995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006995", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" }, { "name": "regulation of leaf morphogenesis", "id": "GO:1901371", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901371", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" }, { "name": "nitrate import", "id": "GO:1902025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902025", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "B3H5A9", "url": "https://www.uniprot.org/uniprotkb/B3H5A9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H5J1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 88, "chemical_mass": 10052.0, "gene_names": "GLV10;CLE-like7;CLEL7;GLV10;GOLVEN 10;MFG13;RGF5;root meristem growth factor 5", "protein_name": "Protein GOLVEN 10", "disease": [], "biological_process": [ { "name": "regulation of asymmetric cell division", "id": "GO:0009786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009786", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "regulation of lateral root development", "id": "GO:2000023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000023", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "root system development", "id": "GO:0022622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022622", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" } ], "molecular_function": [ { "name": "growth factor activity", "id": "GO:0008083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008083", "evidence": [ { "database": "UniProtKB", "id": "B3H5J1", "url": "https://www.uniprot.org/uniprotkb/B3H5J1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H5K9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 782, "chemical_mass": 84757.0, "gene_names": "NEDD1;DEVELOPMENTALLY DOWN-REGULATED GENE 1;GCP-WD;K18J17.16;K18J17_16;NEDD1;NEURAL PRECURSOR CELL EXPRESSED", "protein_name": "Protein NEDD1", "disease": [], "cellular_component": [ { "name": "kinetochore microtubule", "id": "GO:0005828", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005828", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "microtubule organizing center", "id": "GO:0005815", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005815", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of microtubule nucleation", "id": "GO:0010968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010968", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "regulation of mitotic spindle organization", "id": "GO:0060236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060236", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "positive regulation of cytokinesis", "id": "GO:0032467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032467", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "cell plate assembly", "id": "GO:0000919", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000919", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" }, { "name": "regulation of phragmoplast microtubule organization", "id": "GO:2000694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000694", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" } ], "molecular_function": [ { "name": "gamma-tubulin complex binding", "id": "GO:0140496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140496", "evidence": [ { "database": "UniProtKB", "id": "B3H5K9", "url": "https://www.uniprot.org/uniprotkb/B3H5K9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "371", "end_pos": "371", "site_lbl": "Ser371", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 371, "start_aa": "Ser", "end_pos": 371, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser371", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "373", "end_pos": "373", "site_lbl": "Ser373", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 373, "start_aa": "Ser", "end_pos": 373, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser373", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "495", "end_pos": "495", "site_lbl": "Thr495", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 495, "start_aa": "Thr", "end_pos": 495, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr495", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 495, "start_aa": "Thr", "end_pos": 495, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr495", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "497", "end_pos": "497", "site_lbl": "Ser497", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 497, "start_aa": "Ser", "end_pos": 497, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser497", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Ser498", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 498, "start_aa": "Ser", "end_pos": 498, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser498", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "564", "end_pos": "564", "site_lbl": "Ser564", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 564, "start_aa": "Ser", "end_pos": 564, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser564", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "B3H5K9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/B3H5K9" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "457", "end_pos": "457", "site_lbl": "Ser457", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5K9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5K9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "620", "end_pos": "620", "site_lbl": "Ser620", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5K9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5K9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B3H5K9-1", "start_pos": "628", "end_pos": "628", "site_lbl": "Ser628", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5K9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5K9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H5Q2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 111, "chemical_mass": 12671.0, "gene_names": "GLV8;CLEL5;F14P3;GLV8;GOLVEN 8", "protein_name": "Protein GOLVEN 8", "disease": [], "biological_process": [ { "name": "regulation of asymmetric cell division", "id": "GO:0009786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009786", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" }, { "name": "root hair initiation", "id": "GO:0048766", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048766", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" }, { "name": "root hair cell development", "id": "GO:0080147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080147", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" }, { "name": "regulation of lateral root development", "id": "GO:2000023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000023", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" } ], "molecular_function": [ { "name": "growth factor activity", "id": "GO:0008083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008083", "evidence": [ { "database": "UniProtKB", "id": "B3H5Q2", "url": "https://www.uniprot.org/uniprotkb/B3H5Q2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3H5Q2-1", "start_pos": "81", "end_pos": "81", "site_lbl": "Ser81", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5Q2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5Q2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B3H5Q2-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Ser82", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5Q2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5Q2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B3H5Q2-1", "start_pos": "85", "end_pos": "85", "site_lbl": "Ser85", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3H5Q2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3H5Q2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K0E8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 741, "chemical_mass": 82256.0, "gene_names": "HDS;ISPG;4-hydroxy-3-methylbut-2-enyl diphosphate synthase;CHLOROPLAST BIOGENESIS 4;CLB4;CONSTITUTIVE SUBTILISIN 3;CSB3;GCPE;HDS;ISPG;MUP24.15;MUP24.2;MUP24_15", "protein_name": "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)", "id": "GO:0046429", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046429", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" } ], "biological_process": [ { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "terpenoid biosynthetic process", "id": "GO:0016114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016114", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "systemic acquired resistance, salicylic acid mediated signaling pathway", "id": "GO:0009862", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009862", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" }, { "name": "isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway", "id": "GO:0019288", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019288", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4K0E8-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Ser253", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0E8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0E8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4K0E8-1", "start_pos": "279", "end_pos": "279", "site_lbl": "Ser279", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0E8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0E8" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4K0E8-1", "start_pos": "696", "end_pos": "696", "site_lbl": "Gly696", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In clb4-3/csb3; semi-dwarf phenotype, elevated levels of salicylic acid and enhanced resistance to biotrophic pathogens.", "evidence": [ { "database": "UniProtKB", "id": "F4K0E8", "url": "https://www.uniprot.org/uniprotkb/F4K0E8" }, { "database": "PubMed", "id": "16167903", "url": "https://glygen.org/publication/PubMed/16167903" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H754-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 404, "chemical_mass": 45067.0, "gene_names": "APD3;ABERRANT POLLEN DEVELOPMENT 3;APD3;F16M14.15;F16M14_15", "protein_name": "E3 ubiquitin-protein ligase APD3", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "positive regulation of mitotic cell cycle", "id": "GO:0045931", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045931", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "B3H754", "url": "https://www.uniprot.org/uniprotkb/B3H754" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3H7I1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 78, "chemical_mass": 8240.0, "gene_names": "PROSCOOP12;K15C23;SCOOP12", "protein_name": "Serine rich endogenous peptide 12", "disease": [], "biological_process": [ { "name": "reactive oxygen species biosynthetic process", "id": "GO:1903409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903409", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "negative regulation of reactive oxygen species metabolic process", "id": "GO:2000378", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000378", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of reactive oxygen species metabolic process", "id": "GO:2000377", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000377", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of defense response to bacterium", "id": "GO:1900424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900424", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "response to insect", "id": "GO:0009625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009625", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "defense response to insect", "id": "GO:0002213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002213", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "cell-cell signaling involved in cell fate commitment", "id": "GO:0045168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045168", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "jasmonic acid biosynthetic process", "id": "GO:0009695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009695", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "indole glucosinolate biosynthetic process", "id": "GO:0009759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009759", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of unidimensional cell growth", "id": "GO:0051510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051510", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "response to herbivore", "id": "GO:0080027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080027", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of defense response to fungus", "id": "GO:1900150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900150", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "apoplast", "id": "GO:0048046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048046", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" } ], "molecular_function": [ { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" }, { "name": "LRR domain binding", "id": "GO:0030275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030275", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3H7I1-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Ser56", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Impaired seedling growth inhibition and altered induction of reactive oxygen species (ROS) burst. Loss of MIK2 binding and subsequent association with BAK1/SERK3, and impaired MIK2-dependent seedling and root growth inhibition and altered induction of reactive oxygen species (ROS) burst; when associated with A-58.", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" }, { "database": "PubMed", "id": "30715439", "url": "https://glygen.org/publication/PubMed/30715439" }, { "database": "PubMed", "id": "34535661", "url": "https://glygen.org/publication/PubMed/34535661" } ] } ] }, { "uniprot_canonical_ac": "B3H7I1-1", "start_pos": "58", "end_pos": "58", "site_lbl": "Ser58", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Impaired seedling growth inhibition. Loss of MIK2 binding and subsequent association with BAK1/SERK3, and impaired MIK2-dependent seedling and root growth inhibition and altered induction of reactive oxygen species (ROS) burst; when associated with A-56.", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" }, { "database": "PubMed", "id": "30715439", "url": "https://glygen.org/publication/PubMed/30715439" }, { "database": "PubMed", "id": "34535661", "url": "https://glygen.org/publication/PubMed/34535661" } ] } ] }, { "uniprot_canonical_ac": "B3H7I1-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Arg64", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "", "comment": "Abolished activity of SCOOP12 peptide.", "evidence": [ { "database": "UniProtKB", "id": "B3H7I1", "url": "https://www.uniprot.org/uniprotkb/B3H7I1" }, { "database": "PubMed", "id": "33514716", "url": "https://glygen.org/publication/PubMed/33514716" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B3LF48-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 546, "chemical_mass": 61383.0, "gene_names": "EHD2;ATEHD2;EHD2;EPS15 homology domain 2;T1J24.10;T1J24_10", "protein_name": "EH domain-containing protein 2", "disease": [], "molecular_function": [ { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "G protein activity", "id": "GO:0003925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003925", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" } ], "biological_process": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "regulation of actin cytoskeleton organization", "id": "GO:0032956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032956", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "protein homooligomerization", "id": "GO:0051260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051260", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" }, { "name": "endosomal transport", "id": "GO:0016197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016197", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B3LF48-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Ser147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3LF48", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3LF48" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B3LF48-1", "start_pos": "149", "end_pos": "149", "site_lbl": "Ser149", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B3LF48", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B3LF48" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B3LF48-1", "start_pos": "204", "end_pos": "204", "site_lbl": "Gly204", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "Loss of negative effect on endocytosis.", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" }, { "database": "PubMed", "id": "19936242", "url": "https://glygen.org/publication/PubMed/19936242" } ] } ] }, { "uniprot_canonical_ac": "B3LF48-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Gly37", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "Slightly increased nuclear subcellular localization.", "evidence": [ { "database": "UniProtKB", "id": "B3LF48", "url": "https://www.uniprot.org/uniprotkb/B3LF48" }, { "database": "PubMed", "id": "19936242", "url": "https://glygen.org/publication/PubMed/19936242" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B5BT18-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2045, "chemical_mass": 227055.0, "gene_names": "BTAF1;RGD3;ATBTAF1;BTAF1;CHA16;CHR16;F24B22.240;RGD3;ROOT GROWTH DEFECTIVE 3", "protein_name": "TATA-binding protein-associated factor BTAF1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" }, { "name": "TBP-class protein binding", "id": "GO:0017025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017025", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of shoot apical meristem development", "id": "GO:1902185", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902185", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B5BT18-1", "start_pos": "1952", "end_pos": "1952", "site_lbl": "Ser1952", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5BT18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5BT18" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] } ] }, { "uniprot_canonical_ac": "B5BT18-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Ser208", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5BT18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5BT18" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B5BT18-1", "start_pos": "932", "end_pos": "932", "site_lbl": "Gly932", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In rgd3-1; impaired in adventitious root formation at the restrictive temperature of 28 degrees Celsius. Impaired in shoot regeneration.", "evidence": [ { "database": "UniProtKB", "id": "B5BT18", "url": "https://www.uniprot.org/uniprotkb/B5BT18" }, { "database": "PubMed", "id": "19054368", "url": "https://glygen.org/publication/PubMed/19054368" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B5X0I6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1091, "chemical_mass": 124088.0, "gene_names": "VIP6;EARLY FLOWERING 8;ELF8;F5K7.3;F5K7_3;VERNALIZATION INDEPENDENCE 6;VIP6", "protein_name": "Protein CTR9 homolog", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" }, { "name": "Cdc73/Paf1 complex", "id": "GO:0016593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016593", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" }, { "name": "transcription elongation by RNA polymerase II", "id": "GO:0006368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006368", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" }, { "name": "negative regulation of flower development", "id": "GO:0009910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009910", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA polymerase II complex binding", "id": "GO:0000993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000993", "evidence": [ { "database": "UniProtKB", "id": "B5X0I6", "url": "https://www.uniprot.org/uniprotkb/B5X0I6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B5X0I6-1", "start_pos": "1047", "end_pos": "1047", "site_lbl": "Ser1047", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5X0I6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X0I6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B5X0I6-1", "start_pos": "1059", "end_pos": "1059", "site_lbl": "Ser1059", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5X0I6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X0I6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B5X0I6-1", "start_pos": "1063", "end_pos": "1063", "site_lbl": "Ser1063", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5X0I6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X0I6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B5X0I6-1", "start_pos": "1064", "end_pos": "1064", "site_lbl": "Ser1064", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5X0I6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X0I6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B5X4Z9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 617, "chemical_mass": 68877.0, "gene_names": "STU;T24I21.16;T24I21_16", "protein_name": "Protein kinase STUNTED", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of cell division", "id": "GO:0051781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051781", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "gibberellic acid mediated signaling pathway", "id": "GO:0009740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009740", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "response to gibberellin", "id": "GO:0009739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009739", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" }, { "name": "gibberellin mediated signaling pathway", "id": "GO:0010476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010476", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B5X4Z9-1", "start_pos": "350", "end_pos": "350", "site_lbl": "Tyr350", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ] } ] }, { "uniprot_canonical_ac": "B5X4Z9-1", "start_pos": "403", "end_pos": "403", "site_lbl": "Ser403", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ] } ] }, { "uniprot_canonical_ac": "B5X4Z9-1", "start_pos": "439", "end_pos": "439", "site_lbl": "Thr439", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" }, { "database": "iPTMnet", "id": "B5X4Z9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X4Z9" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "B5X4Z9-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Tyr447", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B5X4Z9", "url": "https://www.uniprot.org/uniprotkb/B5X4Z9" } ] } ] }, { "uniprot_canonical_ac": "B5X4Z9-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Tyr450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B5X4Z9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B5X4Z9" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B5X582-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 709, "chemical_mass": 80403.0, "gene_names": "T5I8.13", "protein_name": "Primase-helicase Twinkle, chloroplastic/mitochondrial", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "single-stranded DNA binding", "id": "GO:0003697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003697", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "5'-3' DNA helicase activity", "id": "GO:0043139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043139", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "DNA-directed RNA polymerase activity", "id": "GO:0003899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003899", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA replication, synthesis of primer", "id": "GO:0006269", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006269", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" }, { "name": "ribonucleotide biosynthetic process", "id": "GO:0009260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009260", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B5X582-1", "start_pos": "697", "end_pos": "697", "site_lbl": "Thr697", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 697, "start_aa": "Thr", "end_pos": 697, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr697", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "B5X582-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Asn163", "weight": 0.0, "mutagenesis": [ { "sequence_org": "N", "sequence_mut": "A", "comment": "Loss of primase activity.", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" }, { "database": "PubMed", "id": "37803262", "url": "https://glygen.org/publication/PubMed/37803262" } ] } ] }, { "uniprot_canonical_ac": "B5X582-1", "start_pos": "168", "end_pos": "168", "site_lbl": "Lys168", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Strongly decreases primase activity.", "evidence": [ { "database": "UniProtKB", "id": "B5X582", "url": "https://www.uniprot.org/uniprotkb/B5X582" }, { "database": "PubMed", "id": "37803262", "url": "https://glygen.org/publication/PubMed/37803262" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B6EUA9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 958, "chemical_mass": 109382.0, "gene_names": "PRP40A;ATPRP40A;F27F5.2;MED35A;MED35_1;PRP40A;T12C22.20;pre-mRNA-processing protein 40A", "protein_name": "Pre-mRNA-processing protein 40A", "disease": [], "cellular_component": [ { "name": "U1 snRNP", "id": "GO:0005685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005685", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "U2-type prespliceosome", "id": "GO:0071004", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071004", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "RNA polymerase binding", "id": "GO:0070063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070063", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" }, { "name": "mRNA cis splicing, via spliceosome", "id": "GO:0045292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045292", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Thr337", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 337, "start_aa": "Thr", "end_pos": 337, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr337", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "387", "end_pos": "387", "site_lbl": "Ser387", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B6EUA9", "url": "https://www.uniprot.org/uniprotkb/B6EUA9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "499", "end_pos": "499", "site_lbl": "Ser499", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "853", "end_pos": "853", "site_lbl": "Ser853", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "858", "end_pos": "858", "site_lbl": "Ser858", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "862", "end_pos": "862", "site_lbl": "Thr862", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "867", "end_pos": "867", "site_lbl": "Ser867", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "926", "end_pos": "926", "site_lbl": "Ser926", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "929", "end_pos": "929", "site_lbl": "Ser929", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "931", "end_pos": "931", "site_lbl": "Ser931", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "B6EUA9-1", "start_pos": "946", "end_pos": "946", "site_lbl": "Ser946", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B6EUA9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B6EUA9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B7U179-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 737, "chemical_mass": 81361.0, "gene_names": "ABAP1;ABAP1;ARMADILLO BTB protein 1;T19L5.20;T19L5_20", "protein_name": "ARMADILLO BTB ARABIDOPSIS PROTEIN 1", "disease": [], "cellular_component": [ { "name": "DNA replication preinitiation complex", "id": "GO:0031261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031261", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" } ], "biological_process": [ { "name": "negative regulation of DNA-templated DNA replication", "id": "GO:2000104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000104", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "negative regulation of cell population proliferation", "id": "GO:0008285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008285", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "regulation of cell population proliferation", "id": "GO:0042127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042127", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" }, { "name": "DNA-templated DNA replication", "id": "GO:0006261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006261", "evidence": [ { "database": "UniProtKB", "id": "B7U179", "url": "https://www.uniprot.org/uniprotkb/B7U179" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B7U179-1", "start_pos": "527", "end_pos": "527", "site_lbl": "Ser527", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7U179", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7U179" } ] } ] }, { "uniprot_canonical_ac": "B7U179-1", "start_pos": "532", "end_pos": "532", "site_lbl": "Tyr532", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7U179", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7U179" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B7ZWR6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 554, "chemical_mass": 60757.0, "gene_names": "OEP61;AtTPR7;OEP61;T6G21.100;TPR7;outer envelope protein 61;tetratricopeptide repeat 7", "protein_name": "Outer envelope protein 61", "disease": [], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "pmid": "" }, { "name": "cytosol to endoplasmic reticulum transport", "id": "GO:0046967", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046967", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "pmid": "" }, { "name": "chloroplast outer membrane", "id": "GO:0009707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009707", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "362", "end_pos": "362", "site_lbl": "Thr362", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 362, "start_aa": "Thr", "end_pos": 362, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr362", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "313", "end_pos": "313", "site_lbl": "Ser313", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "390", "end_pos": "390", "site_lbl": "Ser390", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "418", "end_pos": "418", "site_lbl": "Ser418", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "419", "end_pos": "419", "site_lbl": "Ser419", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "420", "end_pos": "420", "site_lbl": "Ser420", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "423", "end_pos": "423", "site_lbl": "Ser423", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "462", "end_pos": "462", "site_lbl": "Ser462", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B7ZWR6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B7ZWR6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "181", "end_pos": "181", "site_lbl": "Lys181", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "Weak binding to HSP70-1 and HSP90-2.", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" }, { "database": "PubMed", "id": "22899711", "url": "https://glygen.org/publication/PubMed/22899711" } ] } ] }, { "uniprot_canonical_ac": "B7ZWR6-1", "start_pos": "185", "end_pos": "185", "site_lbl": "Arg185", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "Loss of binding to HSP70-1.", "evidence": [ { "database": "UniProtKB", "id": "B7ZWR6", "url": "https://www.uniprot.org/uniprotkb/B7ZWR6" }, { "database": "PubMed", "id": "21612577", "url": "https://glygen.org/publication/PubMed/21612577" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B8XCH5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1081, "chemical_mass": 121413.0, "gene_names": "QKY;F1M20.40;F25A4.30;F25A4.35;F25A4_35;MCTP15;QKY;QUIRKY", "protein_name": "Protein QUIRKY", "disease": [], "biological_process": [ { "name": "tissue morphogenesis", "id": "GO:0048729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048729", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "positive regulation of flower development", "id": "GO:0009911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009911", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "plasmodesmata-mediated intercellular transport", "id": "GO:0010497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010497", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "gynoecium development", "id": "GO:0048467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048467", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "anisotropic cell growth", "id": "GO:0051211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051211", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "plant organ development", "id": "GO:0099402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099402", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" } ], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B8XCH5", "url": "https://www.uniprot.org/uniprotkb/B8XCH5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B8XCH5-1", "start_pos": "110", "end_pos": "110", "site_lbl": "Tyr110", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B8XCH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B8XCH5" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B8XCH5-1", "start_pos": "112", "end_pos": "112", "site_lbl": "Ser112", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B8XCH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B8XCH5" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "B8XCH5-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Ser218", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B8XCH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B8XCH5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B8XCH5-1", "start_pos": "262", "end_pos": "262", "site_lbl": "Ser262", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B8XCH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B8XCH5" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B8XCH5-1", "start_pos": "305", "end_pos": "305", "site_lbl": "Ser305", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B8XCH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B8XCH5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFG3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1171, "chemical_mass": 132437.0, "gene_names": "ISE2;EMB25;EMBRYO DEFECTIVE 25;F20P5.20;F20P5_20;INCREASED SIZE EXCLUSION LIMIT 2;ISE2;PDE317;PIGMENT DEFECTIVE 317", "protein_name": "DExH-box ATP-dependent RNA helicase DExH15 chloroplastic", "disease": [], "biological_process": [ { "name": "resolution of meiotic recombination intermediates", "id": "GO:0000712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000712", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "cytidine to uridine editing", "id": "GO:0016554", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016554", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "regulatory ncRNA-mediated gene silencing", "id": "GO:0031047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031047", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "post-transcriptional gene silencing", "id": "GO:0016441", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016441", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "Group II intron splicing", "id": "GO:0000373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000373", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "plasmodesmata-mediated intercellular transport", "id": "GO:0010497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010497", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "chloroplast rRNA processing", "id": "GO:1901259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901259", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "RNA helicase activity", "id": "GO:0003724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003724", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFG3-1", "start_pos": "384", "end_pos": "384", "site_lbl": "Tyr384", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG3" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "B9DFG3-1", "start_pos": "632", "end_pos": "632", "site_lbl": "Thr632", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DFG3-1", "start_pos": "703", "end_pos": "703", "site_lbl": "Tyr703", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFG3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFG3" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "B9DFG3-1", "start_pos": "275", "end_pos": "275", "site_lbl": "Asp275", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In emb25, ise2-2; embryo development arrested at cotyledon stage, abnormal PD regulation end development.", "evidence": [ { "database": "UniProtKB", "id": "B9DFG3", "url": "https://www.uniprot.org/uniprotkb/B9DFG3" }, { "database": "PubMed", "id": "17601829", "url": "https://glygen.org/publication/PubMed/17601829" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFK5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 432, "chemical_mass": 46629.0, "gene_names": "RE;LCD1;LOWER CELL DENSITY 1;T8P21.23;T8P21_23", "protein_name": "Protein RETICULATA, chloroplastic", "disease": [], "molecular_function": [ { "name": "L-ornithine transmembrane transporter activity", "id": "GO:0000064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000064", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" } ], "biological_process": [ { "name": "response to reactive oxygen species", "id": "GO:0000302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000302", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "photoperiodism", "id": "GO:0009648", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009648", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "ornithine transport", "id": "GO:0015822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015822", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "leaf development", "id": "GO:0048366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048366", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" }, { "name": "plant organ development", "id": "GO:0099402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099402", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFK5-1", "start_pos": "295", "end_pos": "295", "site_lbl": "Pro295", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In re-4; pale interveinal phenotype.", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" }, { "database": "PubMed", "id": "16873448", "url": "https://glygen.org/publication/PubMed/16873448" } ] } ] }, { "uniprot_canonical_ac": "B9DFK5-1", "start_pos": "328", "end_pos": "328", "site_lbl": "Gly328", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In re-3; pale interveinal phenotype.", "evidence": [ { "database": "UniProtKB", "id": "B9DFK5", "url": "https://www.uniprot.org/uniprotkb/B9DFK5" }, { "database": "PubMed", "id": "16873448", "url": "https://glygen.org/publication/PubMed/16873448" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFU2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 522, "chemical_mass": 59425.0, "gene_names": "CYP711A1;CYP711A1;MAX1;MORE AXILLARY BRANCHES 1;T19L18.2;T1D16.19;T1D16.2;T1D16_19;T1D16_2;cytochrome P450;family 711;polypeptide 1;subfamily A", "protein_name": "Cytochrome P450 711A1", "disease": [], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "heme binding", "id": "GO:0020037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0020037", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "monooxygenase activity", "id": "GO:0004497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004497", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "id": "GO:0016705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016705", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" } ], "biological_process": [ { "name": "auxin polar transport", "id": "GO:0009926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009926", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "regulation of meristem structural organization", "id": "GO:0009934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009934", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "secondary shoot formation", "id": "GO:0010223", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010223", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "carotenoid biosynthetic process", "id": "GO:0016117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016117", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" }, { "name": "positive regulation of flavonoid biosynthetic process", "id": "GO:0009963", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009963", "evidence": [ { "database": "UniProtKB", "id": "B9DFU2", "url": "https://www.uniprot.org/uniprotkb/B9DFU2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFU2-1", "start_pos": "50", "end_pos": "50", "site_lbl": "Thr50", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 50, "start_aa": "Thr", "end_pos": 50, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr50", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "B9DFU2-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Tyr455", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFU2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFU2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DFZ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 386, "chemical_mass": 42415.0, "gene_names": "NTH2;ATNTH2;NTH2;T20M3.18;T20M3_18;endonuclease III 2", "protein_name": "Endonuclease III homolog 2, chloroplastic", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "DNA N-glycosylase activity", "id": "GO:0019104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019104", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "DNA-(apurinic or apyrimidinic site) endonuclease activity", "id": "GO:0003906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003906", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "class I DNA-(apurinic or apyrimidinic site) endonuclease activity", "id": "GO:0140078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140078", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity", "id": "GO:0000703", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000703", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" } ], "biological_process": [ { "name": "base-excision repair", "id": "GO:0006284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006284", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "nucleotide-excision repair", "id": "GO:0006289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006289", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" }, { "name": "base-excision repair, AP site formation", "id": "GO:0006285", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006285", "evidence": [ { "database": "UniProtKB", "id": "B9DFZ0", "url": "https://www.uniprot.org/uniprotkb/B9DFZ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DFZ0-1", "start_pos": "100", "end_pos": "100", "site_lbl": "Ser100", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFZ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFZ0" } ] } ] }, { "uniprot_canonical_ac": "B9DFZ0-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Ser40", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DFZ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DFZ0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DGT7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 450, "chemical_mass": 49541.0, "gene_names": "TUBA2;F2J10.11;F2J10_11;TUA2;tubulin alpha-2 chain", "protein_name": "Tubulin alpha-2 chain", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "microtubule-based process", "id": "GO:0007017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007017", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" } ], "molecular_function": [ { "name": "structural constituent of cytoskeleton", "id": "GO:0005200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005200", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "tubulin complex", "id": "GO:0045298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045298", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DGT7-1", "start_pos": "216", "end_pos": "216", "site_lbl": "Ser216", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGT7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DGT7-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Ser218", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGT7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "B9DGT7-1", "start_pos": "349", "end_pos": "349", "site_lbl": "Thr349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DGT7", "url": "https://www.uniprot.org/uniprotkb/B9DGT7" }, { "database": "iPTMnet", "id": "B9DGT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGT7" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DGY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 695, "chemical_mass": 78279.0, "gene_names": "ABC1K7;SIA1;AtSIA1;F17A17.4;MLP3.15;SIA1;salt-induced ABC1 kinase 1", "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "cellular response to oxidative stress", "id": "GO:0034599", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034599", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "regulation of response to reactive oxygen species", "id": "GO:1901031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901031", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "response to iron ion starvation", "id": "GO:1990641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990641", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "membrane lipid biosynthetic process", "id": "GO:0046467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046467", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" }, { "name": "plastoglobule", "id": "GO:0010287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010287", "evidence": [ { "database": "UniProtKB", "id": "B9DGY1", "url": "https://www.uniprot.org/uniprotkb/B9DGY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DGY1-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Ser26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGY1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "B9DGY1-1", "start_pos": "310", "end_pos": "310", "site_lbl": "Tyr310", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGY1" } ] } ] }, { "uniprot_canonical_ac": "B9DGY1-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Tyr41", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DGY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DGY1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DHQ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 450, "chemical_mass": 49654.0, "gene_names": "TUBA5;ALPHA TUBULIN;T29J13.200;TUA5;tubulin alpha-5", "protein_name": "Tubulin alpha-5 chain", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "microtubule-based process", "id": "GO:0007017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007017", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" } ], "molecular_function": [ { "name": "structural constituent of cytoskeleton", "id": "GO:0005200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005200", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "tubulin complex", "id": "GO:0045298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045298", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "plant-type cell wall", "id": "GO:0009505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009505", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DHQ0-1", "start_pos": "349", "end_pos": "349", "site_lbl": "Thr349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "B9DHQ0", "url": "https://www.uniprot.org/uniprotkb/B9DHQ0" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "B9DHQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DHQ0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9DHT4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 710, "chemical_mass": 78186.0, "gene_names": "ARIA;ARIA;ARM repeat protein interacting with ABF2;F7K24.80;F7K24_80", "protein_name": "ARM REPEAT PROTEIN INTERACTING WITH ABF2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" } ], "biological_process": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" }, { "name": "negative regulation of seed germination", "id": "GO:0010187", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010187", "evidence": [ { "database": "UniProtKB", "id": "B9DHT4", "url": "https://www.uniprot.org/uniprotkb/B9DHT4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "B9DHT4-1", "start_pos": "523", "end_pos": "523", "site_lbl": "Ser523", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DHT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DHT4" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "iPTMnet", "id": "F4K132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K132" } ] } ] }, { "uniprot_canonical_ac": "B9DHT4-1", "start_pos": "525", "end_pos": "525", "site_lbl": "Thr525", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "B9DHT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/B9DHT4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "iPTMnet", "id": "F4K132", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K132" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "B9TSP7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 548, "chemical_mass": 61626.0, "gene_names": "FAR6;AtFAR6;FAR6;T8M16.30;fatty acid reductase 6", "protein_name": "Fatty acyl-CoA reductase 6, chloroplastic", "disease": [], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" }, { "name": "long-chain fatty-acyl-CoA metabolic process", "id": "GO:0035336", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035336", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" }, { "name": "suberin biosynthetic process", "id": "GO:0010345", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010345", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" } ], "molecular_function": [ { "name": "alcohol-forming very long-chain fatty acyl-CoA reductase activity", "id": "GO:0080019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080019", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" }, { "name": "alcohol-forming long-chain fatty acyl-CoA reductase activity", "id": "GO:0102965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102965", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "B9TSP7", "url": "https://www.uniprot.org/uniprotkb/B9TSP7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGD9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 871, "chemical_mass": 96926.0, "gene_names": "F22G5.6", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07560", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Asn143", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 143, "start_aa": "Asn", "end_pos": 143, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn143", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "182", "end_pos": "182", "site_lbl": "Asn182", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 182, "start_aa": "Asn", "end_pos": 182, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn182", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "236", "end_pos": "236", "site_lbl": "Asn236", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 236, "start_aa": "Asn", "end_pos": 236, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn236", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "255", "end_pos": "255", "site_lbl": "Thr255", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 255, "start_aa": "Thr", "end_pos": 255, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr255", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Asn258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 258, "start_aa": "Asn", "end_pos": 258, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn258", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "291", "end_pos": "291", "site_lbl": "Asn291", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 291, "start_aa": "Asn", "end_pos": 291, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn291", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "297", "end_pos": "297", "site_lbl": "Asn297", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 297, "start_aa": "Asn", "end_pos": 297, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn297", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "407", "end_pos": "407", "site_lbl": "Asn407", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 407, "start_aa": "Asn", "end_pos": 407, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn407", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Asn434", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 434, "start_aa": "Asn", "end_pos": 434, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn434", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Asn447", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 447, "start_aa": "Asn", "end_pos": 447, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn447", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Asn466", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 466, "start_aa": "Asn", "end_pos": 466, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn466", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Asn471", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 471, "start_aa": "Asn", "end_pos": 471, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn471", "evidence": [ { "id": "C0LGD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGD9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "561", "end_pos": "561", "site_lbl": "Thr561", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "643", "end_pos": "643", "site_lbl": "Tyr643", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "696", "end_pos": "696", "site_lbl": "Ser696", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "726", "end_pos": "726", "site_lbl": "Ser726", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "727", "end_pos": "727", "site_lbl": "Thr727", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "732", "end_pos": "732", "site_lbl": "Thr732", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] }, { "uniprot_canonical_ac": "C0LGD9-1", "start_pos": "740", "end_pos": "740", "site_lbl": "Tyr740", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGD9", "url": "https://www.uniprot.org/uniprotkb/C0LGD9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGF4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 591, "chemical_mass": 64916.0, "gene_names": "FEI1;FEI 1;FEI1;FEI2;T8E3.2;T8E3_2", "protein_name": "LRR receptor-like serine/threonine-protein kinase FEI 1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" } ], "biological_process": [ { "name": "unidimensional cell growth", "id": "GO:0009826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009826", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" }, { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "120", "end_pos": "120", "site_lbl": "Asn120", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 120, "start_aa": "Asn", "end_pos": 120, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn120", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "176", "end_pos": "176", "site_lbl": "Asn176", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 176, "start_aa": "Asn", "end_pos": 176, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn176", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "45", "end_pos": "45", "site_lbl": "Thr45", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 45, "start_aa": "Thr", "end_pos": 45, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr45", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "80", "end_pos": "80", "site_lbl": "Asn80", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 80, "start_aa": "Asn", "end_pos": 80, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn80", "evidence": [ { "id": "C0LGF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGF4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "386", "end_pos": "386", "site_lbl": "Ser386", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "462", "end_pos": "462", "site_lbl": "Thr462", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "463", "end_pos": "463", "site_lbl": "Thr463", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Thr468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Tyr476", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" } ] } ] }, { "uniprot_canonical_ac": "C0LGF4-1", "start_pos": "334", "end_pos": "334", "site_lbl": "Lys334", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of kinase activity, normal interaction with ACC synthases.", "evidence": [ { "database": "UniProtKB", "id": "C0LGF4", "url": "https://www.uniprot.org/uniprotkb/C0LGF4" }, { "database": "PubMed", "id": "19017745", "url": "https://glygen.org/publication/PubMed/19017745" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGG8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1038, "chemical_mass": 114945.0, "gene_names": "NILR2;T3F20.25;T3F20_25", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g53430", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "112", "end_pos": "112", "site_lbl": "Asn112", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 112, "start_aa": "Asn", "end_pos": 112, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn112", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Asn127", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 127, "start_aa": "Asn", "end_pos": 127, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn127", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Asn196", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 196, "start_aa": "Asn", "end_pos": 196, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn196", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Asn210", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 210, "start_aa": "Asn", "end_pos": 210, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn210", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Asn231", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 231, "start_aa": "Asn", "end_pos": 231, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn231", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "255", "end_pos": "255", "site_lbl": "Asn255", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 255, "start_aa": "Asn", "end_pos": 255, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn255", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Asn258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 258, "start_aa": "Asn", "end_pos": 258, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn258", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "339", "end_pos": "339", "site_lbl": "Asn339", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 339, "start_aa": "Asn", "end_pos": 339, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn339", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "363", "end_pos": "363", "site_lbl": "Asn363", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 363, "start_aa": "Asn", "end_pos": 363, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn363", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Asn471", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 471, "start_aa": "Asn", "end_pos": 471, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn471", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "48", "end_pos": "48", "site_lbl": "Asn48", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 48, "start_aa": "Asn", "end_pos": 48, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn48", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "561", "end_pos": "561", "site_lbl": "Asn561", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 561, "start_aa": "Asn", "end_pos": 561, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn561", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "77", "end_pos": "77", "site_lbl": "Asn77", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 77, "start_aa": "Asn", "end_pos": 77, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn77", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "85", "end_pos": "85", "site_lbl": "Asn85", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 85, "start_aa": "Asn", "end_pos": 85, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn85", "evidence": [ { "id": "C0LGG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGG8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "1012", "end_pos": "1012", "site_lbl": "Ser1012", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "1021", "end_pos": "1021", "site_lbl": "Ser1021", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "1022", "end_pos": "1022", "site_lbl": "Ser1022", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "1025", "end_pos": "1025", "site_lbl": "Ser1025", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "1033", "end_pos": "1033", "site_lbl": "Thr1033", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "658", "end_pos": "658", "site_lbl": "Thr658", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "742", "end_pos": "742", "site_lbl": "Tyr742", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "828", "end_pos": "828", "site_lbl": "Ser828", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" }, { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "829", "end_pos": "829", "site_lbl": "Thr829", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" }, { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "834", "end_pos": "834", "site_lbl": "Thr834", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "842", "end_pos": "842", "site_lbl": "Tyr842", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGG8", "url": "https://www.uniprot.org/uniprotkb/C0LGG8" } ] } ] }, { "uniprot_canonical_ac": "C0LGG8-1", "start_pos": "958", "end_pos": "958", "site_lbl": "Ser958", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGG8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGH8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 664, "chemical_mass": 73910.0, "gene_names": "F2K11.19;F2K11_19", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g63430", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "C0LGH8", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGH8-1", "start_pos": "197", "end_pos": "197", "site_lbl": "Asn197", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 197, "start_aa": "Asn", "end_pos": 197, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn197", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGH8-1", "start_pos": "75", "end_pos": "75", "site_lbl": "Asn75", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 75, "start_aa": "Asn", "end_pos": 75, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn75", "evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGH8-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Ser150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGH8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGI5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 591, "chemical_mass": 65553.0, "gene_names": "F20P5.27", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g69990", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Asn211", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 211, "start_aa": "Asn", "end_pos": 211, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn211", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "46", "end_pos": "46", "site_lbl": "Asn46", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 46, "start_aa": "Asn", "end_pos": 46, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn46", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "292", "end_pos": "292", "site_lbl": "Thr292", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Ser378", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Thr389", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "463", "end_pos": "463", "site_lbl": "Tyr463", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Ser465", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Thr466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_canonical_ac": "C0LGI5-1", "start_pos": "470", "end_pos": "470", "site_lbl": "Ser470", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGI5", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGJ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1106, "chemical_mass": 121895.0, "gene_names": "F1M20.4", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g74360", "disease": [], "biological_process": [ { "name": "multidimensional cell growth", "id": "GO:0009825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009825", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "defense response to nematode", "id": "GO:0002215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002215", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" }, { "name": "mitochondrial membrane", "id": "GO:0031966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031966", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "106", "end_pos": "106", "site_lbl": "Asn106", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 106, "start_aa": "Asn", "end_pos": 106, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn106", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Asn141", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 141, "start_aa": "Asn", "end_pos": 141, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn141", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Asn188", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 188, "start_aa": "Asn", "end_pos": 188, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn188", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Asn193", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 193, "start_aa": "Asn", "end_pos": 193, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn193", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "242", "end_pos": "242", "site_lbl": "Asn242", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 242, "start_aa": "Asn", "end_pos": 242, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn242", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "251", "end_pos": "251", "site_lbl": "Asn251", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 251, "start_aa": "Asn", "end_pos": 251, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn251", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "309", "end_pos": "309", "site_lbl": "Asn309", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 309, "start_aa": "Asn", "end_pos": 309, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn309", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Asn322", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 322, "start_aa": "Asn", "end_pos": 322, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn322", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "365", "end_pos": "365", "site_lbl": "Asn365", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 365, "start_aa": "Asn", "end_pos": 365, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn365", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "374", "end_pos": "374", "site_lbl": "Asn374", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 374, "start_aa": "Asn", "end_pos": 374, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn374", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "384", "end_pos": "384", "site_lbl": "Asn384", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 384, "start_aa": "Asn", "end_pos": 384, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn384", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "408", "end_pos": "408", "site_lbl": "Asn408", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 408, "start_aa": "Asn", "end_pos": 408, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn408", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "454", "end_pos": "454", "site_lbl": "Asn454", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 454, "start_aa": "Asn", "end_pos": 454, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn454", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Asn467", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 467, "start_aa": "Asn", "end_pos": 467, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn467", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "623", "end_pos": "623", "site_lbl": "Asn623", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 623, "start_aa": "Asn", "end_pos": 623, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn623", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "628", "end_pos": "628", "site_lbl": "Asn628", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 628, "start_aa": "Asn", "end_pos": 628, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn628", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Asn652", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 652, "start_aa": "Asn", "end_pos": 652, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn652", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "671", "end_pos": "671", "site_lbl": "Asn671", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 671, "start_aa": "Asn", "end_pos": 671, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn671", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "709", "end_pos": "709", "site_lbl": "Asn709", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 709, "start_aa": "Asn", "end_pos": 709, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn709", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "713", "end_pos": "713", "site_lbl": "Asn713", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 713, "start_aa": "Asn", "end_pos": 713, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn713", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "93", "end_pos": "93", "site_lbl": "Asn93", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 93, "start_aa": "Asn", "end_pos": 93, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn93", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "803", "end_pos": "803", "site_lbl": "Thr803", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "811", "end_pos": "811", "site_lbl": "Thr811", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "983", "end_pos": "983", "site_lbl": "Tyr983", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_canonical_ac": "C0LGJ1-1", "start_pos": "991", "end_pos": "991", "site_lbl": "Thr991", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGJ1", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGL9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 589, "chemical_mass": 64355.0, "gene_names": "FEI2;FEI 2;FEI2;T20F21.18;T20F21_18", "protein_name": "LRR receptor-like serine/threonine-protein kinase FEI 2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" } ], "biological_process": [ { "name": "unidimensional cell growth", "id": "GO:0009826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009826", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "plant-type cell wall biogenesis", "id": "GO:0009832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009832", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "mucilage biosynthetic process", "id": "GO:0010192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010192", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" }, { "name": "mucilage biosynthetic process involved in seed coat development", "id": "GO:0048354", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048354", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "119", "end_pos": "119", "site_lbl": "Asn119", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 119, "start_aa": "Asn", "end_pos": 119, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn119", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Asn143", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 143, "start_aa": "Asn", "end_pos": 143, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn143", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "175", "end_pos": "175", "site_lbl": "Asn175", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 175, "start_aa": "Asn", "end_pos": 175, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn175", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "215", "end_pos": "215", "site_lbl": "Asn215", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 215, "start_aa": "Asn", "end_pos": 215, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn215", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "219", "end_pos": "219", "site_lbl": "Asn219", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 219, "start_aa": "Asn", "end_pos": 219, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn219", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "384", "end_pos": "384", "site_lbl": "Ser384", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Thr460", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "461", "end_pos": "461", "site_lbl": "Thr461", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Thr466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "474", "end_pos": "474", "site_lbl": "Tyr474", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_canonical_ac": "C0LGL9-1", "start_pos": "336", "end_pos": "336", "site_lbl": "Lys336", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "R", "comment": "Normal interaction with ACC synthases.", "evidence": [ { "database": "UniProtKB", "id": "C0LGL9", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" }, { "database": "PubMed", "id": "19017745", "url": "https://glygen.org/publication/PubMed/19017745" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGN2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1020, "chemical_mass": 112277.0, "gene_names": "LRR-RLK;LIK1;LysM RLK1-interacting kinase 1;T21E2.2", "protein_name": "Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" }, { "name": "jasmonic acid and ethylene-dependent systemic resistance", "id": "GO:0009861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009861", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "124", "end_pos": "124", "site_lbl": "Asn124", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 124, "start_aa": "Asn", "end_pos": 124, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn124", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Asn138", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 138, "start_aa": "Asn", "end_pos": 138, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn138", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "156", "end_pos": "156", "site_lbl": "Asn156", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 156, "start_aa": "Asn", "end_pos": 156, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn156", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Asn193", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 193, "start_aa": "Asn", "end_pos": 193, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn193", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "276", "end_pos": "276", "site_lbl": "Asn276", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 276, "start_aa": "Asn", "end_pos": 276, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn276", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Asn289", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 289, "start_aa": "Asn", "end_pos": 289, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn289", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "359", "end_pos": "359", "site_lbl": "Asn359", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 359, "start_aa": "Asn", "end_pos": 359, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn359", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "386", "end_pos": "386", "site_lbl": "Asn386", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 386, "start_aa": "Asn", "end_pos": 386, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn386", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Asn389", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 389, "start_aa": "Asn", "end_pos": 389, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn389", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Asn417", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 417, "start_aa": "Asn", "end_pos": 417, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn417", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "461", "end_pos": "461", "site_lbl": "Asn461", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 461, "start_aa": "Asn", "end_pos": 461, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn461", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "469", "end_pos": "469", "site_lbl": "Asn469", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 469, "start_aa": "Asn", "end_pos": 469, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn469", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Asn498", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 498, "start_aa": "Asn", "end_pos": 498, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn498", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "50", "end_pos": "50", "site_lbl": "Asn50", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 50, "start_aa": "Asn", "end_pos": 50, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn50", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "81", "end_pos": "81", "site_lbl": "Asn81", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 81, "start_aa": "Asn", "end_pos": 81, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn81", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "1013", "end_pos": "1013", "site_lbl": "Ser1013", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "262", "end_pos": "262", "site_lbl": "Thr262", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "265", "end_pos": "265", "site_lbl": "Ser265", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "658", "end_pos": "658", "site_lbl": "Ser658", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "659", "end_pos": "659", "site_lbl": "Ser659", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "661", "end_pos": "661", "site_lbl": "Ser661", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "745", "end_pos": "745", "site_lbl": "Tyr745", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "828", "end_pos": "828", "site_lbl": "Thr828", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "831", "end_pos": "831", "site_lbl": "Ser831", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" }, { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "832", "end_pos": "832", "site_lbl": "Thr832", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" }, { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "837", "end_pos": "837", "site_lbl": "Thr837", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "845", "end_pos": "845", "site_lbl": "Tyr845", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGN2", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "958", "end_pos": "958", "site_lbl": "Ser958", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" } ] } ] }, { "uniprot_canonical_ac": "C0LGN2-1", "start_pos": "967", "end_pos": "967", "site_lbl": "Ser967", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGN2" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGQ4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 678, "chemical_mass": 75820.0, "gene_names": "MDIS2;F28A21.50;F28A21_50;MRH1;morphogenesis of root hair 1", "protein_name": "Protein MALE DISCOVERER 2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" } ], "cellular_component": [ { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" }, { "name": "pollen tube", "id": "GO:0090406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090406", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" } ], "biological_process": [ { "name": "root hair cell differentiation", "id": "GO:0048765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048765", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ4", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGQ4-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Asn52", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 52, "start_aa": "Asn", "end_pos": 52, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn52", "evidence": [ { "id": "C0LGQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ4-1", "start_pos": "597", "end_pos": "597", "site_lbl": "Tyr597", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGQ4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ4" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGQ5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1249, "chemical_mass": 137288.0, "gene_names": "GSO1;F1C12.60;F1C12_60;GASSHO1;GSO1;SGN3", "protein_name": "LRR receptor-like serine/threonine-protein kinase GSO1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "Casparian strip", "id": "GO:0048226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048226", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "establishment of protein localization", "id": "GO:0045184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045184", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "potassium ion homeostasis", "id": "GO:0055075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055075", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "endodermal cell differentiation", "id": "GO:0035987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035987", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "regulation of cell fate specification", "id": "GO:0042659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042659", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "specification of plant organ axis polarity", "id": "GO:0090708", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090708", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" }, { "name": "Casparian strip assembly", "id": "GO:0160073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160073", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "117", "end_pos": "117", "site_lbl": "Asn117", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 117, "start_aa": "Asn", "end_pos": 117, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn117", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|B|117", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "213", "end_pos": "213", "site_lbl": "Asn213", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 213, "start_aa": "Asn", "end_pos": 213, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn213", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|213", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "228", "end_pos": "228", "site_lbl": "Asn228", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 228, "start_aa": "Asn", "end_pos": 228, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn228", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "248", "end_pos": "248", "site_lbl": "Asn248", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 248, "start_aa": "Asn", "end_pos": 248, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn248", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|248", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "298", "end_pos": "298", "site_lbl": "Asn298", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 298, "start_aa": "Asn", "end_pos": 298, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn298", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "309", "end_pos": "309", "site_lbl": "Asn309", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 309, "start_aa": "Asn", "end_pos": 309, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn309", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "334", "end_pos": "334", "site_lbl": "Asn334", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 334, "start_aa": "Asn", "end_pos": 334, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn334", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|334", "database": "", "url": "" }, { "id": "6S6Q|B|334", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Asn369", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 369, "start_aa": "Asn", "end_pos": 369, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn369", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "393", "end_pos": "393", "site_lbl": "Asn393", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 393, "start_aa": "Asn", "end_pos": 393, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn393", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "406", "end_pos": "406", "site_lbl": "Asn406", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 406, "start_aa": "Asn", "end_pos": 406, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn406", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|406", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "454", "end_pos": "454", "site_lbl": "Asn454", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 454, "start_aa": "Asn", "end_pos": 454, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn454", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|454", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "537", "end_pos": "537", "site_lbl": "Asn537", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 537, "start_aa": "Asn", "end_pos": 537, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn537", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|537", "database": "", "url": "" }, { "id": "6S6Q|B|537", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "553", "end_pos": "553", "site_lbl": "Asn553", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 553, "start_aa": "Asn", "end_pos": 553, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn553", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|553", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "558", "end_pos": "558", "site_lbl": "Asn558", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 558, "start_aa": "Asn", "end_pos": 558, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn558", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "565", "end_pos": "565", "site_lbl": "Asn565", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 565, "start_aa": "Asn", "end_pos": 565, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn565", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|565", "database": "", "url": "" }, { "id": "6S6Q|B|565", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "693", "end_pos": "693", "site_lbl": "Asn693", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 693, "start_aa": "Asn", "end_pos": 693, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn693", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "708", "end_pos": "708", "site_lbl": "Asn708", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 708, "start_aa": "Asn", "end_pos": 708, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn708", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|708", "database": "", "url": "" }, { "id": "6S6Q|B|708", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "779", "end_pos": "779", "site_lbl": "Asn779", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 779, "start_aa": "Asn", "end_pos": 779, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn779", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|779", "database": "", "url": "" }, { "id": "6S6Q|B|779", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "77", "end_pos": "77", "site_lbl": "Asn77", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 77, "start_aa": "Asn", "end_pos": 77, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn77", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|77", "database": "", "url": "" }, { "id": "6S6Q|B|77", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "822", "end_pos": "822", "site_lbl": "Asn822", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 822, "start_aa": "Asn", "end_pos": 822, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn822", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q", "database": "PDB", "url": "https://www.rcsb.org/structure/6S6Q" }, { "id": "6S6Q|A|822", "database": "", "url": "" }, { "id": "6S6Q|B|822", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1027", "end_pos": "1027", "site_lbl": "Tyr1027", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1071", "end_pos": "1071", "site_lbl": "Tyr1071", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1129", "end_pos": "1129", "site_lbl": "Tyr1129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1136", "end_pos": "1136", "site_lbl": "Tyr1136", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "948", "end_pos": "948", "site_lbl": "Thr948", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1101", "end_pos": "1101", "site_lbl": "Gly1101", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In sgn3-8; altered CASP proteins localization in Casparian strips; when associated with R-287.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "1150", "end_pos": "1150", "site_lbl": "Gly1150", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In sgn3-18; altered CASP proteins localization in Casparian strips. In sgn3-12; altered CASP proteins localization in Casparian strips; when associated with R-719.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] }, { "sequence_org": "G", "sequence_mut": "R", "comment": "In sgn3-17; altered CASP proteins localization in Casparian strips.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Pro160", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In sgn3-5; altered CASP proteins localization in Casparian strips.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "287", "end_pos": "287", "site_lbl": "Gly287", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In sgn3-8; altered CASP proteins localization in Casparian strips; when associated with R-1101.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ5-1", "start_pos": "719", "end_pos": "719", "site_lbl": "Gly719", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In sgn3-12; altered CASP proteins localization in Casparian strips; when associated with E-1150.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ5", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" }, { "database": "PubMed", "id": "25233277", "url": "https://glygen.org/publication/PubMed/25233277" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGQ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1053, "chemical_mass": 113881.0, "gene_names": "GHR1;GHR1;GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1;RCD7;T13K14.100;T13K14_100", "protein_name": "LRR receptor-like serine/threonine-protein kinase GHR1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" } ], "biological_process": [ { "name": "protein phosphorylation", "id": "GO:0006468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006468", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "positive regulation of abscisic acid-activated signaling pathway", "id": "GO:0009789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009789", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "cellular response to carbon dioxide", "id": "GO:0071244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071244", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "regulation of stomatal closure", "id": "GO:0090333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090333", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" }, { "name": "cellular response to absence of light", "id": "GO:0071485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071485", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "103", "end_pos": "103", "site_lbl": "Asn103", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 103, "start_aa": "Asn", "end_pos": 103, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn103", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Asn146", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 146, "start_aa": "Asn", "end_pos": 146, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn146", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "153", "end_pos": "153", "site_lbl": "Asn153", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 153, "start_aa": "Asn", "end_pos": 153, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn153", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Asn196", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 196, "start_aa": "Asn", "end_pos": 196, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn196", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "239", "end_pos": "239", "site_lbl": "Asn239", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 239, "start_aa": "Asn", "end_pos": 239, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn239", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "269", "end_pos": "269", "site_lbl": "Asn269", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 269, "start_aa": "Asn", "end_pos": 269, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn269", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "347", "end_pos": "347", "site_lbl": "Asn347", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 347, "start_aa": "Asn", "end_pos": 347, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn347", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "394", "end_pos": "394", "site_lbl": "Asn394", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 394, "start_aa": "Asn", "end_pos": 394, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn394", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "432", "end_pos": "432", "site_lbl": "Asn432", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 432, "start_aa": "Asn", "end_pos": 432, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn432", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "534", "end_pos": "534", "site_lbl": "Asn534", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 534, "start_aa": "Asn", "end_pos": 534, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn534", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "566", "end_pos": "566", "site_lbl": "Asn566", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 566, "start_aa": "Asn", "end_pos": 566, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn566", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "575", "end_pos": "575", "site_lbl": "Asn575", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 575, "start_aa": "Asn", "end_pos": 575, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn575", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "621", "end_pos": "621", "site_lbl": "Asn621", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 621, "start_aa": "Asn", "end_pos": 621, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn621", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "92", "end_pos": "92", "site_lbl": "Asn92", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 92, "start_aa": "Asn", "end_pos": 92, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn92", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "100", "end_pos": "100", "site_lbl": "Ser100", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1010", "end_pos": "1010", "site_lbl": "Thr1010", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1015", "end_pos": "1015", "site_lbl": "Ser1015", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Ser102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1045", "end_pos": "1045", "site_lbl": "Thr1045", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1047", "end_pos": "1047", "site_lbl": "Tyr1047", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1051", "end_pos": "1051", "site_lbl": "Ser1051", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "1052", "end_pos": "1052", "site_lbl": "Ser1052", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "105", "end_pos": "105", "site_lbl": "Ser105", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "126", "end_pos": "126", "site_lbl": "Ser126", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "262", "end_pos": "262", "site_lbl": "Ser262", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "278", "end_pos": "278", "site_lbl": "Ser278", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "280", "end_pos": "280", "site_lbl": "Thr280", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Ser281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "325", "end_pos": "325", "site_lbl": "Ser325", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "406", "end_pos": "406", "site_lbl": "Tyr406", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "410", "end_pos": "410", "site_lbl": "Ser410", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "415", "end_pos": "415", "site_lbl": "Thr415", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Ser417", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Ser434", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "613", "end_pos": "613", "site_lbl": "Ser613", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "614", "end_pos": "614", "site_lbl": "Ser614", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "616", "end_pos": "616", "site_lbl": "Ser616", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "669", "end_pos": "669", "site_lbl": "Thr669", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "675", "end_pos": "675", "site_lbl": "Thr675", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "678", "end_pos": "678", "site_lbl": "Ser678", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "680", "end_pos": "680", "site_lbl": "Ser680", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "N", "comment": "In ghr1-16; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "698", "end_pos": "698", "site_lbl": "Ser698", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "699", "end_pos": "699", "site_lbl": "Ser699", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "700", "end_pos": "700", "site_lbl": "Ser700", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "704", "end_pos": "704", "site_lbl": "Ser704", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "713", "end_pos": "713", "site_lbl": "Thr713", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "716", "end_pos": "716", "site_lbl": "Ser716", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "718", "end_pos": "718", "site_lbl": "Ser718", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "720", "end_pos": "720", "site_lbl": "Thr720", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "721", "end_pos": "721", "site_lbl": "Ser721", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "724", "end_pos": "724", "site_lbl": "Ser724", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "760", "end_pos": "760", "site_lbl": "Ser760", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "764", "end_pos": "764", "site_lbl": "Thr764", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "769", "end_pos": "769", "site_lbl": "Ser769", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "928", "end_pos": "928", "site_lbl": "Thr928", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "iPTMnet", "id": "C0LGQ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "108", "end_pos": "108", "site_lbl": "Gly108", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In ghr1-7; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "220", "end_pos": "220", "site_lbl": "Asp220", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In ghr1-13; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3) and slightly higher steady-state stomatal conductance; when associated with D-56.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Asp293", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In ghr1-8; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Cys381", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on the capacity to complement the water loss phenotype of the ghr1 mutant.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "22730405", "url": "https://glygen.org/publication/PubMed/22730405" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Gly56", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In ghr1-13; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3) and slightly higher steady-state stomatal conductance; when associated with N-220.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Cys57", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes the capacity to complement the water loss phenotype of the ghr1 mutant.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "22730405", "url": "https://glygen.org/publication/PubMed/22730405" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "618", "end_pos": "618", "site_lbl": "Ala618", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "T", "comment": "In ghr1-2/rcd7 and ghr1-10; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "637", "end_pos": "637", "site_lbl": "Ala637", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "V", "comment": "In ghr1-15; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "63", "end_pos": "63", "site_lbl": "Gly63", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In ghr1-12; apoplastic ROS-sensitive plants exhibiting increased tissue damage when exposed to ozone (O3). Slightly higher steady-state stomatal conductance.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "30361234", "url": "https://glygen.org/publication/PubMed/30361234" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Cys66", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes the capacity to complement the water loss phenotype of the ghr1 mutant.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "22730405", "url": "https://glygen.org/publication/PubMed/22730405" } ] } ] }, { "uniprot_canonical_ac": "C0LGQ9-1", "start_pos": "798", "end_pos": "798", "site_lbl": "Lys798", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "Loss of phosphorylation activity on SLAC1.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "22730405", "url": "https://glygen.org/publication/PubMed/22730405" } ] }, { "sequence_org": "K", "sequence_mut": "W", "comment": "Impaired ATP binding.", "evidence": [ { "database": "UniProtKB", "id": "C0LGQ9", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" }, { "database": "PubMed", "id": "22730405", "url": "https://glygen.org/publication/PubMed/22730405" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGR3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1091, "chemical_mass": 119529.0, "gene_names": "RGI3;M3E9.30;M3E9_30;RGFR1;RGFR3", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI3", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "peptide binding", "id": "GO:0042277", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042277", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "peptide receptor activity", "id": "GO:0001653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001653", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" } ], "biological_process": [ { "name": "maintenance of meristem identity", "id": "GO:0010074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010074", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "104", "end_pos": "104", "site_lbl": "Asn104", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 104, "start_aa": "Asn", "end_pos": 104, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn104", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Asn163", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 163, "start_aa": "Asn", "end_pos": 163, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn163", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "356", "end_pos": "356", "site_lbl": "Asn356", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 356, "start_aa": "Asn", "end_pos": 356, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn356", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Asn40", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 40, "start_aa": "Asn", "end_pos": 40, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn40", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "431", "end_pos": "431", "site_lbl": "Asn431", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 431, "start_aa": "Asn", "end_pos": 431, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn431", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "452", "end_pos": "452", "site_lbl": "Asn452", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 452, "start_aa": "Asn", "end_pos": 452, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn452", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "604", "end_pos": "604", "site_lbl": "Asn604", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 604, "start_aa": "Asn", "end_pos": 604, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn604", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "5HYX", "database": "PDB", "url": "https://www.rcsb.org/structure/5HYX" }, { "id": "5HYX", "database": "PDB", "url": "https://www.rcsb.org/structure/5HYX" }, { "id": "5HZ0", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ0" }, { "id": "5HZ0", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ0" }, { "id": "5HZ3", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ3" }, { "id": "5HZ3", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ3" }, { "id": "5HZ1", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ1" }, { "id": "5HZ1", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ1" }, { "id": "5HYX|B|604", "database": "", "url": "" }, { "id": "5HZ0|B|604", "database": "", "url": "" }, { "id": "5HZ3|B|604", "database": "", "url": "" }, { "id": "5HZ1|B|604", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "651", "end_pos": "651", "site_lbl": "Asn651", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 651, "start_aa": "Asn", "end_pos": 651, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn651", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "5HYX", "database": "PDB", "url": "https://www.rcsb.org/structure/5HYX" }, { "id": "5HYX", "database": "PDB", "url": "https://www.rcsb.org/structure/5HYX" }, { "id": "5HZ0", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ0" }, { "id": "5HZ0", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ0" }, { "id": "5HZ3", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ3" }, { "id": "5HZ3", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ3" }, { "id": "5HZ1", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ1" }, { "id": "5HZ1", "database": "PDB", "url": "https://www.rcsb.org/structure/5HZ1" }, { "id": "5HYX|B|651", "database": "", "url": "" }, { "id": "5HZ0|B|651", "database": "", "url": "" }, { "id": "5HZ3|B|651", "database": "", "url": "" }, { "id": "5HZ1|B|651", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "697", "end_pos": "697", "site_lbl": "Asn697", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 697, "start_aa": "Asn", "end_pos": 697, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn697", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "762", "end_pos": "762", "site_lbl": "Ser762", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGR3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGR3" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "831", "end_pos": "831", "site_lbl": "Tyr831", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "870", "end_pos": "870", "site_lbl": "Tyr870", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] }, { "uniprot_canonical_ac": "C0LGR3-1", "start_pos": "933", "end_pos": "933", "site_lbl": "Tyr933", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR3", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGR9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 676, "chemical_mass": 75235.0, "gene_names": "F8F16.70", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g31250", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of pollen tube growth", "id": "GO:0080092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080092", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Asn218", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 218, "start_aa": "Asn", "end_pos": 218, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn218", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Asn42", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 42, "start_aa": "Asn", "end_pos": 42, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn42", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "475", "end_pos": "475", "site_lbl": "Thr475", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 475, "start_aa": "Thr", "end_pos": 475, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr475", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "73", "end_pos": "73", "site_lbl": "Asn73", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 73, "start_aa": "Asn", "end_pos": 73, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn73", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "83", "end_pos": "83", "site_lbl": "Asn83", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 83, "start_aa": "Asn", "end_pos": 83, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn83", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "368", "end_pos": "368", "site_lbl": "Ser368", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" }, { "database": "iPTMnet", "id": "C0LGR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGR9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "379", "end_pos": "379", "site_lbl": "Ser379", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGR9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGR9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "381", "end_pos": "381", "site_lbl": "Tyr381", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGR9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "446", "end_pos": "446", "site_lbl": "Ser446", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] } ] }, { "uniprot_canonical_ac": "C0LGR9-1", "start_pos": "543", "end_pos": "543", "site_lbl": "Ser543", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGR9", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGS2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1136, "chemical_mass": 123664.0, "gene_names": "F23E13.70;F23E13_70", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g36180", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" }, { "name": "pollen tube", "id": "GO:0090406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090406", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "105", "end_pos": "105", "site_lbl": "Asn105", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 105, "start_aa": "Asn", "end_pos": 105, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn105", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Asn138", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 138, "start_aa": "Asn", "end_pos": 138, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn138", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "184", "end_pos": "184", "site_lbl": "Asn184", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 184, "start_aa": "Asn", "end_pos": 184, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn184", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "192", "end_pos": "192", "site_lbl": "Asn192", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 192, "start_aa": "Asn", "end_pos": 192, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn192", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "232", "end_pos": "232", "site_lbl": "Asn232", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 232, "start_aa": "Asn", "end_pos": 232, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn232", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "269", "end_pos": "269", "site_lbl": "Asn269", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 269, "start_aa": "Asn", "end_pos": 269, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn269", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Asn281", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 281, "start_aa": "Asn", "end_pos": 281, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn281", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "365", "end_pos": "365", "site_lbl": "Asn365", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 365, "start_aa": "Asn", "end_pos": 365, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn365", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Asn441", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 441, "start_aa": "Asn", "end_pos": 441, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn441", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "474", "end_pos": "474", "site_lbl": "Asn474", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 474, "start_aa": "Asn", "end_pos": 474, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn474", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "477", "end_pos": "477", "site_lbl": "Asn477", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 477, "start_aa": "Asn", "end_pos": 477, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn477", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "482", "end_pos": "482", "site_lbl": "Asn482", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 482, "start_aa": "Asn", "end_pos": 482, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn482", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "511", "end_pos": "511", "site_lbl": "Asn511", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 511, "start_aa": "Asn", "end_pos": 511, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn511", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "535", "end_pos": "535", "site_lbl": "Asn535", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 535, "start_aa": "Asn", "end_pos": 535, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn535", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "53", "end_pos": "53", "site_lbl": "Thr53", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 53, "start_aa": "Thr", "end_pos": 53, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr53", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "554", "end_pos": "554", "site_lbl": "Asn554", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 554, "start_aa": "Asn", "end_pos": 554, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn554", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "594", "end_pos": "594", "site_lbl": "Asn594", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 594, "start_aa": "Asn", "end_pos": 594, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn594", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "631", "end_pos": "631", "site_lbl": "Asn631", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 631, "start_aa": "Asn", "end_pos": 631, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn631", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "669", "end_pos": "669", "site_lbl": "Asn669", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 669, "start_aa": "Asn", "end_pos": 669, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn669", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "679", "end_pos": "679", "site_lbl": "Asn679", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 679, "start_aa": "Asn", "end_pos": 679, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn679", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "699", "end_pos": "699", "site_lbl": "Asn699", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 699, "start_aa": "Asn", "end_pos": 699, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn699", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "719", "end_pos": "719", "site_lbl": "Asn719", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 719, "start_aa": "Asn", "end_pos": 719, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn719", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "1010", "end_pos": "1010", "site_lbl": "Tyr1010", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "1131", "end_pos": "1131", "site_lbl": "Ser1131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS2" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "1134", "end_pos": "1134", "site_lbl": "Ser1134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS2" }, { "database": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "830", "end_pos": "830", "site_lbl": "Thr830", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "838", "end_pos": "838", "site_lbl": "Thr838", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "915", "end_pos": "915", "site_lbl": "Tyr915", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS2", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_canonical_ac": "C0LGS2-1", "start_pos": "994", "end_pos": "994", "site_lbl": "Ser994", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS2" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGS3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 768, "chemical_mass": 84063.0, "gene_names": "AP22.22;AP22_22;C7A10.110", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g37250", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Asn144", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 144, "start_aa": "Asn", "end_pos": 144, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn144", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Asn163", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 163, "start_aa": "Asn", "end_pos": 163, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn163", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Asn196", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 196, "start_aa": "Asn", "end_pos": 196, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn196", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "212", "end_pos": "212", "site_lbl": "Asn212", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 212, "start_aa": "Asn", "end_pos": 212, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn212", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "233", "end_pos": "233", "site_lbl": "Asn233", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 233, "start_aa": "Asn", "end_pos": 233, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn233", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "242", "end_pos": "242", "site_lbl": "Asn242", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 242, "start_aa": "Asn", "end_pos": 242, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn242", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "294", "end_pos": "294", "site_lbl": "Thr294", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 294, "start_aa": "Thr", "end_pos": 294, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr294", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "636", "end_pos": "636", "site_lbl": "Thr636", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 636, "start_aa": "Thr", "end_pos": 636, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr636", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Asn64", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 64, "start_aa": "Asn", "end_pos": 64, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn64", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "99", "end_pos": "99", "site_lbl": "Asn99", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 99, "start_aa": "Asn", "end_pos": 99, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn99", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "451", "end_pos": "451", "site_lbl": "Ser451", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "531", "end_pos": "531", "site_lbl": "Ser531", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "553", "end_pos": "553", "site_lbl": "Thr553", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "648", "end_pos": "648", "site_lbl": "Ser648", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "650", "end_pos": "650", "site_lbl": "Tyr650", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "655", "end_pos": "655", "site_lbl": "Ser655", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS3" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "662", "end_pos": "662", "site_lbl": "Ser662", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGS3", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_canonical_ac": "C0LGS3-1", "start_pos": "762", "end_pos": "762", "site_lbl": "Ser762", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGS3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGS3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGT1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 613, "chemical_mass": 68659.0, "gene_names": "F18D22.60;F18D22_60", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g10290", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" }, { "name": "defense response to insect", "id": "GO:0002213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002213", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "116", "end_pos": "116", "site_lbl": "Asn116", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 116, "start_aa": "Asn", "end_pos": 116, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn116", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "155", "end_pos": "155", "site_lbl": "Asn155", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 155, "start_aa": "Asn", "end_pos": 155, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn155", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Asn193", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 193, "start_aa": "Asn", "end_pos": 193, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn193", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "81", "end_pos": "81", "site_lbl": "Asn81", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 81, "start_aa": "Asn", "end_pos": 81, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn81", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "287", "end_pos": "287", "site_lbl": "Thr287", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "313", "end_pos": "313", "site_lbl": "Thr313", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "325", "end_pos": "325", "site_lbl": "Ser325", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT1" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "371", "end_pos": "371", "site_lbl": "Ser371", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "390", "end_pos": "390", "site_lbl": "Thr390", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Thr450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "451", "end_pos": "451", "site_lbl": "Thr451", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "456", "end_pos": "456", "site_lbl": "Thr456", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "464", "end_pos": "464", "site_lbl": "Tyr464", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Ser466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Thr467", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Ser471", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_canonical_ac": "C0LGT1-1", "start_pos": "547", "end_pos": "547", "site_lbl": "Thr547", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT1", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGT6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1031, "chemical_mass": 113353.0, "gene_names": "EFR;EF-TU receptor;EFR;F7C8.70;F7C8_70", "protein_name": "LRR receptor-like serine/threonine-protein kinase EFR", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "transmembrane receptor protein kinase activity", "id": "GO:0019199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019199", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" } ], "biological_process": [ { "name": "detection of bacterium", "id": "GO:0016045", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016045", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "hormone-mediated signaling pathway", "id": "GO:0009755", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009755", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "immune response-regulating signaling pathway", "id": "GO:0002764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002764", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "response to molecule of bacterial origin", "id": "GO:0002237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002237", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" }, { "name": "pathogen-associated molecular pattern receptor signaling pathway", "id": "GO:0140426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140426", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Asn127", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 127, "start_aa": "Asn", "end_pos": 127, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn127", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "143", "end_pos": "143", "site_lbl": "Asn143", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 143, "start_aa": "Asn", "end_pos": 143, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn143", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "180", "end_pos": "180", "site_lbl": "Asn180", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 180, "start_aa": "Asn", "end_pos": 180, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn180", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "191", "end_pos": "191", "site_lbl": "Asn191", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 191, "start_aa": "Asn", "end_pos": 191, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn191", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "239", "end_pos": "239", "site_lbl": "Asn239", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 239, "start_aa": "Asn", "end_pos": 239, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn239", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "288", "end_pos": "288", "site_lbl": "Asn288", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 288, "start_aa": "Asn", "end_pos": 288, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn288", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "28", "end_pos": "28", "site_lbl": "Asn28", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 28, "start_aa": "Asn", "end_pos": 28, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn28", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Asn323", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 323, "start_aa": "Asn", "end_pos": 323, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn323", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "329", "end_pos": "329", "site_lbl": "Asn329", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 329, "start_aa": "Asn", "end_pos": 329, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn329", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "342", "end_pos": "342", "site_lbl": "Asn342", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 342, "start_aa": "Asn", "end_pos": 342, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn342", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "366", "end_pos": "366", "site_lbl": "Asn366", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 366, "start_aa": "Asn", "end_pos": 366, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn366", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "439", "end_pos": "439", "site_lbl": "Asn439", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 439, "start_aa": "Asn", "end_pos": 439, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn439", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "478", "end_pos": "478", "site_lbl": "Asn478", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 478, "start_aa": "Asn", "end_pos": 478, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn478", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "55", "end_pos": "55", "site_lbl": "Asn55", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 55, "start_aa": "Asn", "end_pos": 55, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn55", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "571", "end_pos": "571", "site_lbl": "Asn571", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 571, "start_aa": "Asn", "end_pos": 571, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn571", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "590", "end_pos": "590", "site_lbl": "Asn590", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 590, "start_aa": "Asn", "end_pos": 590, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn590", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "608", "end_pos": "608", "site_lbl": "Asn608", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 608, "start_aa": "Asn", "end_pos": 608, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn608", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "95", "end_pos": "95", "site_lbl": "Asn95", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 95, "start_aa": "Asn", "end_pos": 95, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn95", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "1002", "end_pos": "1002", "site_lbl": "Ser1002", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "1008", "end_pos": "1008", "site_lbl": "Thr1008", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "1010", "end_pos": "1010", "site_lbl": "Ser1010", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "301", "end_pos": "301", "site_lbl": "Tyr301", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Ser303", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "683", "end_pos": "683", "site_lbl": "Ser683", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "690", "end_pos": "690", "site_lbl": "Ser690", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "709", "end_pos": "709", "site_lbl": "Thr709", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "791", "end_pos": "791", "site_lbl": "Tyr791", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] } ], "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "836", "end_pos": "836", "site_lbl": "Tyr836", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" }, { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" } ] } ], "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "Loss of elf18-triggered immunity, but no effect on the kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "897", "end_pos": "897", "site_lbl": "Tyr897", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" }, { "database": "iPTMnet", "id": "C0LGT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGT6" } ] } ], "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "702", "end_pos": "702", "site_lbl": "Tyr702", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "849", "end_pos": "849", "site_lbl": "Asp849", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "Loss of kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "875", "end_pos": "875", "site_lbl": "Tyr875", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "877", "end_pos": "877", "site_lbl": "Tyr877", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "902", "end_pos": "902", "site_lbl": "Tyr902", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "915", "end_pos": "915", "site_lbl": "Tyr915", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "939", "end_pos": "939", "site_lbl": "Tyr939", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "944", "end_pos": "944", "site_lbl": "Tyr944", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] }, { "uniprot_canonical_ac": "C0LGT6-1", "start_pos": "979", "end_pos": "979", "site_lbl": "Tyr979", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "F", "comment": "No effect on elf18-triggered immunity.", "evidence": [ { "database": "UniProtKB", "id": "C0LGT6", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" }, { "database": "PubMed", "id": "24625928", "url": "https://glygen.org/publication/PubMed/24625928" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGU0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 662, "chemical_mass": 73483.0, "gene_names": "PRK1;PRK1;PRKD;RLK;T26D22.9;T26D22_9;pollen receptor like kinase 1", "protein_name": "Pollen receptor-like kinase 1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" }, { "name": "apical part of cell", "id": "GO:0045177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045177", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGU0-1", "start_pos": "197", "end_pos": "197", "site_lbl": "Asn197", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 197, "start_aa": "Asn", "end_pos": 197, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn197", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU0-1", "start_pos": "359", "end_pos": "359", "site_lbl": "Ser359", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_canonical_ac": "C0LGU0-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Ser437", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_canonical_ac": "C0LGU0-1", "start_pos": "457", "end_pos": "457", "site_lbl": "Thr457", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_canonical_ac": "C0LGU0-1", "start_pos": "527", "end_pos": "527", "site_lbl": "Tyr527", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU0", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGU7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 695, "chemical_mass": 78476.0, "gene_names": "MDIS1;K15I22.4;K15I22_4", "protein_name": "Protein MALE DISCOVERER 1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "pollen tube", "id": "GO:0090406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090406", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" } ], "biological_process": [ { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" }, { "name": "pollen tube guidance", "id": "GO:0010183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010183", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGU7-1", "start_pos": "247", "end_pos": "247", "site_lbl": "Asn247", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 247, "start_aa": "Asn", "end_pos": 247, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn247", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU7-1", "start_pos": "316", "end_pos": "316", "site_lbl": "Asn316", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 316, "start_aa": "Asn", "end_pos": 316, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn316", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU7-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Asn56", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 56, "start_aa": "Asn", "end_pos": 56, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn56", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU7-1", "start_pos": "80", "end_pos": "80", "site_lbl": "Asn80", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 80, "start_aa": "Asn", "end_pos": 80, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn80", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGU7-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Ser652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGU7", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" }, { "database": "PubMed", "id": "26863186", "url": "https://glygen.org/publication/PubMed/26863186" }, { "database": "iPTMnet", "id": "C0LGU7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGU7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGV1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1135, "chemical_mass": 123612.0, "gene_names": "RGI2;K19E20.5;K19E20_5;RCH1;RGFR2;RGFR3", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "peptide binding", "id": "GO:0042277", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042277", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "peptide receptor activity", "id": "GO:0001653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001653", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" } ], "biological_process": [ { "name": "maintenance of meristem identity", "id": "GO:0010074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010074", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "root meristem growth", "id": "GO:0010449", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010449", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "101", "end_pos": "101", "site_lbl": "Asn101", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 101, "start_aa": "Asn", "end_pos": 101, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn101", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "117", "end_pos": "117", "site_lbl": "Asn117", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 117, "start_aa": "Asn", "end_pos": 117, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn117", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "273", "end_pos": "273", "site_lbl": "Asn273", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 273, "start_aa": "Asn", "end_pos": 273, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn273", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "345", "end_pos": "345", "site_lbl": "Asn345", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 345, "start_aa": "Asn", "end_pos": 345, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn345", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "358", "end_pos": "358", "site_lbl": "Asn358", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 358, "start_aa": "Asn", "end_pos": 358, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn358", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Asn369", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 369, "start_aa": "Asn", "end_pos": 369, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn369", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "444", "end_pos": "444", "site_lbl": "Asn444", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 444, "start_aa": "Asn", "end_pos": 444, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn444", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Asn465", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 465, "start_aa": "Asn", "end_pos": 465, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn465", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "492", "end_pos": "492", "site_lbl": "Asn492", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 492, "start_aa": "Asn", "end_pos": 492, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn492", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "502", "end_pos": "502", "site_lbl": "Asn502", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 502, "start_aa": "Asn", "end_pos": 502, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn502", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "521", "end_pos": "521", "site_lbl": "Asn521", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 521, "start_aa": "Asn", "end_pos": 521, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn521", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "524", "end_pos": "524", "site_lbl": "Asn524", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 524, "start_aa": "Asn", "end_pos": 524, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn524", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "598", "end_pos": "598", "site_lbl": "Asn598", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 598, "start_aa": "Asn", "end_pos": 598, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn598", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "618", "end_pos": "618", "site_lbl": "Asn618", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 618, "start_aa": "Asn", "end_pos": 618, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn618", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "665", "end_pos": "665", "site_lbl": "Asn665", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 665, "start_aa": "Asn", "end_pos": 665, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn665", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "707", "end_pos": "707", "site_lbl": "Asn707", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 707, "start_aa": "Asn", "end_pos": 707, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn707", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "777", "end_pos": "777", "site_lbl": "Thr777", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "868", "end_pos": "868", "site_lbl": "Tyr868", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "907", "end_pos": "907", "site_lbl": "Tyr907", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "963", "end_pos": "963", "site_lbl": "Tyr963", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_canonical_ac": "C0LGV1-1", "start_pos": "970", "end_pos": "970", "site_lbl": "Tyr970", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGV1", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGW6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 966, "chemical_mass": 106486.0, "gene_names": "ERL1;ERECTA-like 1;ERL1;MMI9.14;MMI9_14", "protein_name": "LRR receptor-like serine/threonine-protein kinase ERL1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "signaling receptor binding", "id": "GO:0005102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005102", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "receptor serine/threonine kinase binding", "id": "GO:0033612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033612", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" } ], "biological_process": [ { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "stomatal complex morphogenesis", "id": "GO:0010103", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010103", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "plant ovule development", "id": "GO:0048481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048481", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "reproductive shoot system development", "id": "GO:0090567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090567", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" }, { "name": "phyllome development", "id": "GO:0048827", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048827", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "226", "end_pos": "226", "site_lbl": "Asn226", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 226, "start_aa": "Asn", "end_pos": 226, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn226", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "237", "end_pos": "237", "site_lbl": "Asn237", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 237, "start_aa": "Asn", "end_pos": 237, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn237", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "308", "end_pos": "308", "site_lbl": "Asn308", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 308, "start_aa": "Asn", "end_pos": 308, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn308", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "332", "end_pos": "332", "site_lbl": "Asn332", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 332, "start_aa": "Asn", "end_pos": 332, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn332", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "377", "end_pos": "377", "site_lbl": "Asn377", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 377, "start_aa": "Asn", "end_pos": 377, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn377", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "412", "end_pos": "412", "site_lbl": "Asn412", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 412, "start_aa": "Asn", "end_pos": 412, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn412", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Asn441", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 441, "start_aa": "Asn", "end_pos": 441, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn441", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Asn460", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 460, "start_aa": "Asn", "end_pos": 460, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn460", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "532", "end_pos": "532", "site_lbl": "Asn532", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 532, "start_aa": "Asn", "end_pos": 532, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn532", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "537", "end_pos": "537", "site_lbl": "Asn537", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 537, "start_aa": "Asn", "end_pos": 537, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn537", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "547", "end_pos": "547", "site_lbl": "Asn547", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 547, "start_aa": "Asn", "end_pos": 547, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn547", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Asn68", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 68, "start_aa": "Asn", "end_pos": 68, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn68", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "77", "end_pos": "77", "site_lbl": "Asn77", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 77, "start_aa": "Asn", "end_pos": 77, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn77", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "637", "end_pos": "637", "site_lbl": "Thr637", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "645", "end_pos": "645", "site_lbl": "Thr645", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "721", "end_pos": "721", "site_lbl": "Tyr721", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "760", "end_pos": "760", "site_lbl": "Tyr760", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "815", "end_pos": "815", "site_lbl": "Tyr815", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_canonical_ac": "C0LGW6-1", "start_pos": "823", "end_pos": "823", "site_lbl": "Thr823", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGW6", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LGX3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 993, "chemical_mass": 110710.0, "gene_names": "HSL2;F6H11.160;HAESA-like 2;HSL2;MPA24.6;MPA24_6", "protein_name": "LRR receptor-like serine/threonine-protein kinase HSL2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to Gram-negative bacterium", "id": "GO:0050829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050829", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" }, { "name": "lateral root morphogenesis", "id": "GO:0010102", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010102", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" }, { "name": "leaf abscission", "id": "GO:0060866", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060866", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Asn102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 102, "start_aa": "Asn", "end_pos": 102, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn102", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "111", "end_pos": "111", "site_lbl": "Asn111", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 111, "start_aa": "Asn", "end_pos": 111, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn111", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Asn134", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 134, "start_aa": "Asn", "end_pos": 134, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn134", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Asn218", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 218, "start_aa": "Asn", "end_pos": 218, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn218", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "221", "end_pos": "221", "site_lbl": "Asn221", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 221, "start_aa": "Asn", "end_pos": 221, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn221", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "290", "end_pos": "290", "site_lbl": "Asn290", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 290, "start_aa": "Asn", "end_pos": 290, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn290", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Asn303", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 303, "start_aa": "Asn", "end_pos": 303, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn303", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "348", "end_pos": "348", "site_lbl": "Asn348", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 348, "start_aa": "Asn", "end_pos": 348, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn348", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "470", "end_pos": "470", "site_lbl": "Asn470", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 470, "start_aa": "Asn", "end_pos": 470, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn470", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "537", "end_pos": "537", "site_lbl": "Asn537", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 537, "start_aa": "Asn", "end_pos": 537, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn537", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "584", "end_pos": "584", "site_lbl": "Asn584", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 584, "start_aa": "Asn", "end_pos": 584, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn584", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "60", "end_pos": "60", "site_lbl": "Asn60", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 60, "start_aa": "Asn", "end_pos": 60, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn60", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "85", "end_pos": "85", "site_lbl": "Asn85", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 85, "start_aa": "Asn", "end_pos": 85, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn85", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "167", "end_pos": "167", "site_lbl": "Tyr167", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C0LGX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "678", "end_pos": "678", "site_lbl": "Thr678", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "762", "end_pos": "762", "site_lbl": "Tyr762", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "804", "end_pos": "804", "site_lbl": "Tyr804", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "856", "end_pos": "856", "site_lbl": "Ser856", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "864", "end_pos": "864", "site_lbl": "Tyr864", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "871", "end_pos": "871", "site_lbl": "Tyr871", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_canonical_ac": "C0LGX3-1", "start_pos": "872", "end_pos": "872", "site_lbl": "Thr872", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "C0LGX3", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C0LU16-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 139, "chemical_mass": 15041.0, "gene_names": "MED21;MED21_1;MED21;SRB7;T4B21.7;T4B21.8;T4B21_8;mediator 21", "protein_name": "Mediator of RNA polymerase II transcription subunit 21", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" }, { "name": "polar nucleus", "id": "GO:0043078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043078", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "C0LU16", "url": "https://www.uniprot.org/uniprotkb/C0LU16" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "C8KI33-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 646, "chemical_mass": 72806.0, "gene_names": "SUV2;ATRIP;HUS2;MRA19.1;MRA19_1;SENSITIVE TO UV 2;SUV2", "protein_name": "Protein SENSITIVE TO UV 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" } ], "biological_process": [ { "name": "response to gamma radiation", "id": "GO:0010332", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010332", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "response to ionizing radiation", "id": "GO:0010212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010212", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "response to aluminum ion", "id": "GO:0010044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010044", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "response to UV-B", "id": "GO:0010224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010224", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "regulation of cell cycle", "id": "GO:0051726", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051726", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "response to hydroxyurea", "id": "GO:0072710", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072710", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "positive regulation of cell cycle G2/M phase transition", "id": "GO:1902751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902751", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "response to cisplatin", "id": "GO:0072718", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072718", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" }, { "name": "phosphoprotein phosphatase activity", "id": "GO:0004721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004721", "evidence": [ { "database": "UniProtKB", "id": "C8KI33", "url": "https://www.uniprot.org/uniprotkb/C8KI33" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "116", "end_pos": "116", "site_lbl": "Thr116", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 116, "start_aa": "Thr", "end_pos": 116, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr116", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "51", "end_pos": "51", "site_lbl": "Ser51", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 51, "start_aa": "Ser", "end_pos": 51, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser51", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "C8KI33", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/C8KI33" } ] } ] }, { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Ser52", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 52, "start_aa": "Ser", "end_pos": 52, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser52", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "C8KI33", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/C8KI33" } ] } ] }, { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "53", "end_pos": "53", "site_lbl": "Ser53", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 53, "start_aa": "Ser", "end_pos": 53, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser53", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "C8KI33", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/C8KI33" } ] } ] }, { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "114", "end_pos": "114", "site_lbl": "Ser114", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C8KI33", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C8KI33" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "C8KI33-1", "start_pos": "595", "end_pos": "595", "site_lbl": "Ser595", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "C8KI33", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/C8KI33" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "D1KF50-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1147, "chemical_mass": 129430.0, "gene_names": "SRS2;ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2;ATSRS2;F13M23.260;F24A6.8;SRS2;SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2", "protein_name": "ATP-dependent DNA helicase SRS2-like protein At4g25120", "disease": [], "molecular_function": [ { "name": "3'-5' DNA helicase activity", "id": "GO:0043138", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043138", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" }, { "name": "recombinational repair", "id": "GO:0000725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000725", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "D1KF50-1", "start_pos": "273", "end_pos": "273", "site_lbl": "Lys273", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "R", "comment": "Abolishes DNA-ligase unwinding activity.", "evidence": [ { "database": "UniProtKB", "id": "D1KF50", "url": "https://www.uniprot.org/uniprotkb/D1KF50" }, { "database": "PubMed", "id": "19767619", "url": "https://glygen.org/publication/PubMed/19767619" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "D2WL32-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 899, "chemical_mass": 103525.0, "gene_names": "SBE3;BE1;BRANCHING ENZYME 1;EMB2729;EMBRYO DEFECTIVE 2729;MQC12.20", "protein_name": "1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "amyloplast", "id": "GO:0009501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009501", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "post-embryonic development", "id": "GO:0009791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009791", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "glycogen biosynthetic process", "id": "GO:0005978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005978", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "starch biosynthetic process", "id": "GO:0019252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019252", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" } ], "molecular_function": [ { "name": "1,4-alpha-glucan branching enzyme activity", "id": "GO:0003844", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003844", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" }, { "name": "cation binding", "id": "GO:0043169", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043169", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "D2WL32-1", "start_pos": "366", "end_pos": "366", "site_lbl": "Glu366", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "K", "comment": "In be1-3; reduced level of BE1 transcription and various developmental defects during post-germination growth such as shorter primary roots, delayed greening of cotyledons and leaf development, yellowish and small leaves leading to smaller plants with altered petals and sepals in flowers.", "evidence": [ { "database": "UniProtKB", "id": "D2WL32", "url": "https://www.uniprot.org/uniprotkb/D2WL32" }, { "database": "PubMed", "id": "20377688", "url": "https://glygen.org/publication/PubMed/20377688" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F2Y4A3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 481, "chemical_mass": 53890.0, "gene_names": "SPHK1;SPHK2;F18E5.160;F18E5_160;SPHK2;sphingosine kinase 1;sphingosine kinase 2", "protein_name": "Sphingosine kinase 2", "disease": [], "molecular_function": [ { "name": "lipid kinase activity", "id": "GO:0001727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001727", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "phosphatidic acid binding", "id": "GO:0070300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070300", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "sphingosine kinase activity", "id": "GO:0008481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008481", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" } ], "biological_process": [ { "name": "sphingolipid metabolic process", "id": "GO:0006665", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006665", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "sphingosine biosynthetic process", "id": "GO:0046512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046512", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" }, { "name": "cellular response to abscisic acid stimulus", "id": "GO:0071215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071215", "evidence": [ { "database": "UniProtKB", "id": "F2Y4A3", "url": "https://www.uniprot.org/uniprotkb/F2Y4A3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HPR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 817, "chemical_mass": 90616.0, "gene_names": "DRP5A;DRP5A;Dynamin related protein 5A;F8L10.1;F8L10_1", "protein_name": "Dynamin-related protein 5A", "disease": [], "molecular_function": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "cell plate", "id": "GO:0009504", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009504", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" } ], "biological_process": [ { "name": "cytokinesis by cell plate formation", "id": "GO:0000911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000911", "evidence": [ { "database": "UniProtKB", "id": "F4HPR5", "url": "https://www.uniprot.org/uniprotkb/F4HPR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HPR5-1", "start_pos": "12", "end_pos": "12", "site_lbl": "Thr12", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPR5" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4HPR5-1", "start_pos": "14", "end_pos": "14", "site_lbl": "Thr14", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPR5" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4HPR5-1", "start_pos": "4", "end_pos": "4", "site_lbl": "Ser4", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPR5" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4HPR5-1", "start_pos": "6", "end_pos": "6", "site_lbl": "Thr6", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPR5" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HPZ9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1396, "chemical_mass": 156322.0, "gene_names": "LIG6;AtLIG6;DNA LIGASE 6;F4N21.14;F4N21_14;LIG6", "protein_name": "DNA ligase 6", "disease": [], "biological_process": [ { "name": "DNA biosynthetic process", "id": "GO:0071897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071897", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "lagging strand elongation", "id": "GO:0006273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006273", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "double-strand break repair via nonhomologous end joining", "id": "GO:0006303", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006303", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "response to molecule of bacterial origin", "id": "GO:0002237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002237", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "response to UV-C", "id": "GO:0010225", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010225", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "DNA integration", "id": "GO:0015074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015074", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "positive regulation of cellular response to X-ray", "id": "GO:2000685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000685", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "response to bleomycin", "id": "GO:1904975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904975", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" }, { "name": "DNA ligase (ATP) activity", "id": "GO:0003910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003910", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HPZ9", "url": "https://www.uniprot.org/uniprotkb/F4HPZ9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HPZ9-1", "start_pos": "520", "end_pos": "520", "site_lbl": "Thr520", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 520, "start_aa": "Thr", "end_pos": 520, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr520", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HPZ9-1", "start_pos": "1126", "end_pos": "1126", "site_lbl": "Ser1126", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPZ9" } ] } ] }, { "uniprot_canonical_ac": "F4HPZ9-1", "start_pos": "568", "end_pos": "568", "site_lbl": "Thr568", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPZ9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HPZ9-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Ser570", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HPZ9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HPZ9" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HQ84-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 784, "chemical_mass": 88609.0, "gene_names": "COG3;T9L24.37;T9L24_37", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "cis-Golgi network", "id": "GO:0005801", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005801", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "Golgi transport complex", "id": "GO:0017119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017119", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "Golgi organization", "id": "GO:0007030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007030", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "Golgi vesicle transport", "id": "GO:0048193", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048193", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "intra-Golgi vesicle-mediated transport", "id": "GO:0006891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006891", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" }, { "name": "cargo adaptor activity", "id": "GO:0140312", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140312", "evidence": [ { "database": "UniProtKB", "id": "F4HQ84", "url": "https://www.uniprot.org/uniprotkb/F4HQ84" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HQ84-1", "start_pos": "621", "end_pos": "621", "site_lbl": "Thr621", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQ84", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQ84" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HQ84-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQ84", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQ84" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HQA1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 589, "chemical_mass": 67338.0, "gene_names": "VIP2;EARLY FLOWERING 7;ELF7;F19K16.29;F19K16_29;F20B17.16", "protein_name": "Protein PAF1 homolog", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" }, { "name": "RNA polymerase II complex binding", "id": "GO:0000993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000993", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" }, { "name": "Cdc73/Paf1 complex", "id": "GO:0016593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016593", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" } ], "biological_process": [ { "name": "transcription elongation by RNA polymerase II", "id": "GO:0006368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006368", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" }, { "name": "double-strand break repair via homologous recombination", "id": "GO:0000724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000724", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" }, { "name": "negative regulation of flower development", "id": "GO:0009910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009910", "evidence": [ { "database": "UniProtKB", "id": "F4HQA1", "url": "https://www.uniprot.org/uniprotkb/F4HQA1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HQA1-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Thr281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQA1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQA1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4HQA1-1", "start_pos": "579", "end_pos": "579", "site_lbl": "Tyr579", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQA1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQA1" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4HQA1-1", "start_pos": "580", "end_pos": "580", "site_lbl": "Ser580", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQA1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQA1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HQA1-1", "start_pos": "587", "end_pos": "587", "site_lbl": "Tyr587", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQA1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQA1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HQA1-1", "start_pos": "588", "end_pos": "588", "site_lbl": "Ser588", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HQA1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HQA1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HRT5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1132, "chemical_mass": 129093.0, "gene_names": "CRWN1;(Japanese for nucleus) 2;AtLINC1;CROWDED NUCLEI 1;CRWN1;F1N21.5;KAKU2;LINC1;LITTLE NUCLEI1", "protein_name": "Protein CROWDED NUCLEI 1", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "site of double-strand break", "id": "GO:0035861", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035861", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nuclear periphery", "id": "GO:0034399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034399", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nuclear lamina", "id": "GO:0005652", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005652", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of nucleus size", "id": "GO:0097298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097298", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" }, { "name": "nucleus organization", "id": "GO:0006997", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006997", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "776", "end_pos": "776", "site_lbl": "Thr776", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 776, "start_aa": "Thr", "end_pos": 776, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr776", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1001", "end_pos": "1001", "site_lbl": "Ser1001", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1027", "end_pos": "1027", "site_lbl": "Ser1027", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1089", "end_pos": "1089", "site_lbl": "Ser1089", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1093", "end_pos": "1093", "site_lbl": "Ser1093", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1099", "end_pos": "1099", "site_lbl": "Thr1099", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1105", "end_pos": "1105", "site_lbl": "Ser1105", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "1112", "end_pos": "1112", "site_lbl": "Ser1112", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Thr150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "153", "end_pos": "153", "site_lbl": "Ser153", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "25", "end_pos": "25", "site_lbl": "Ser25", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Ser26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "774", "end_pos": "774", "site_lbl": "Ser774", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "803", "end_pos": "803", "site_lbl": "Ser803", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "851", "end_pos": "851", "site_lbl": "Ser851", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "853", "end_pos": "853", "site_lbl": "Thr853", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "855", "end_pos": "855", "site_lbl": "Thr855", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "865", "end_pos": "865", "site_lbl": "Ser865", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "870", "end_pos": "870", "site_lbl": "Ser870", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "874", "end_pos": "874", "site_lbl": "Ser874", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "883", "end_pos": "883", "site_lbl": "Ser883", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "885", "end_pos": "885", "site_lbl": "Ser885", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "906", "end_pos": "906", "site_lbl": "Thr906", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "908", "end_pos": "908", "site_lbl": "Ser908", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HRT5", "url": "https://www.uniprot.org/uniprotkb/F4HRT5" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "932", "end_pos": "932", "site_lbl": "Ser932", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "933", "end_pos": "933", "site_lbl": "Thr933", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "939", "end_pos": "939", "site_lbl": "Ser939", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "944", "end_pos": "944", "site_lbl": "Thr944", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "950", "end_pos": "950", "site_lbl": "Ser950", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "955", "end_pos": "955", "site_lbl": "Ser955", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "971", "end_pos": "971", "site_lbl": "Thr971", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "972", "end_pos": "972", "site_lbl": "Thr972", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "979", "end_pos": "979", "site_lbl": "Ser979", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "983", "end_pos": "983", "site_lbl": "Ser983", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HRT5-1", "start_pos": "985", "end_pos": "985", "site_lbl": "Ser985", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRT5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRT5" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HRV8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 596, "chemical_mass": 67211.0, "gene_names": "ASY1;ASY1;ASYNAPTIC 1;ATASY1;F1N21.19;F1N21.20", "protein_name": "Meiosis-specific protein ASY1", "disease": [], "biological_process": [ { "name": "meiotic recombination checkpoint signaling", "id": "GO:0051598", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051598", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "synaptonemal complex assembly", "id": "GO:0007130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007130", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "homologous chromosome pairing at meiosis", "id": "GO:0007129", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007129", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "chiasma assembly", "id": "GO:0051026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051026", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" } ], "cellular_component": [ { "name": "condensed nuclear chromosome", "id": "GO:0000794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000794", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" }, { "name": "synaptonemal complex", "id": "GO:0000795", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000795", "evidence": [ { "database": "UniProtKB", "id": "F4HRV8", "url": "https://www.uniprot.org/uniprotkb/F4HRV8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HRV8-1", "start_pos": "142", "end_pos": "142", "site_lbl": "Thr142", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRV8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRV8" }, { "database": "PubMed", "id": "31556459", "url": "https://glygen.org/publication/PubMed/31556459" }, { "database": "PubMed", "id": "32558910", "url": "https://glygen.org/publication/PubMed/32558910" } ] } ] }, { "uniprot_canonical_ac": "F4HRV8-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Thr163", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRV8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRV8" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4HRV8-1", "start_pos": "184", "end_pos": "184", "site_lbl": "Thr184", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRV8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRV8" }, { "database": "PubMed", "id": "31556459", "url": "https://glygen.org/publication/PubMed/31556459" }, { "database": "PubMed", "id": "32558910", "url": "https://glygen.org/publication/PubMed/32558910" } ] } ] }, { "uniprot_canonical_ac": "F4HRV8-1", "start_pos": "48", "end_pos": "48", "site_lbl": "Ser48", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HRV8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HRV8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HT77-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 363, "chemical_mass": 42118.0, "gene_names": "RBA1;T3F24.3;T3F24_3", "protein_name": "Disease resistance protein RBA1", "disease": [], "biological_process": [ { "name": "NAD+ catabolic process", "id": "GO:0019677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019677", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "cAMP biosynthetic process", "id": "GO:0006171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006171", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "cGMP biosynthetic process", "id": "GO:0006182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006182", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "DNA catabolic process", "id": "GO:0006308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006308", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "NADP+ catabolic process", "id": "GO:0006742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006742", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "positive regulation of programmed cell death", "id": "GO:0043068", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043068", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "RNA catabolic process", "id": "GO:0006401", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006401", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "induction of programmed cell death", "id": "GO:0012502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012502", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "positive regulation of plant-type hypersensitive response", "id": "GO:0034052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034052", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "defense response by callose deposition", "id": "GO:0052542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052542", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity", "id": "GO:0003953", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003953", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "NADP+ nucleosidase activity", "id": "GO:0050135", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050135", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HT77-1", "start_pos": "149", "end_pos": "149", "site_lbl": "Lys149", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "Decreased ability to induce cell death due to impaired homooligomerization.", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" }, { "database": "PubMed", "id": "28137883", "url": "https://glygen.org/publication/PubMed/28137883" } ] } ] }, { "uniprot_canonical_ac": "F4HT77-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Gly151", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "Abolished ability to induce cell death.", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" }, { "database": "PubMed", "id": "28137883", "url": "https://glygen.org/publication/PubMed/28137883" } ] } ] }, { "uniprot_canonical_ac": "F4HT77-1", "start_pos": "31", "end_pos": "31", "site_lbl": "Ser31", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Decreased ability to induce cell death.", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" }, { "database": "PubMed", "id": "28137883", "url": "https://glygen.org/publication/PubMed/28137883" } ] } ] }, { "uniprot_canonical_ac": "F4HT77-1", "start_pos": "32", "end_pos": "32", "site_lbl": "His32", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Abolished ability to induced cell death.", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" }, { "database": "PubMed", "id": "28137883", "url": "https://glygen.org/publication/PubMed/28137883" } ] } ] }, { "uniprot_canonical_ac": "F4HT77-1", "start_pos": "86", "end_pos": "86", "site_lbl": "Glu86", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "Loss of NAD(+) hydrolase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4HT77", "url": "https://www.uniprot.org/uniprotkb/F4HT77" }, { "database": "PubMed", "id": "31439793", "url": "https://glygen.org/publication/PubMed/31439793" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HTH8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1181, "chemical_mass": 129175.0, "gene_names": "KTN80.2;DWA3;DWD hypersensitive to ABA 3;F11P17.7;F11P17_7", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2", "disease": [], "biological_process": [ { "name": "microtubule severing", "id": "GO:0051013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051013", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "microtubule depolymerization", "id": "GO:0007019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007019", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "regulation of unidimensional cell growth", "id": "GO:0051510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051510", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" } ], "cellular_component": [ { "name": "katanin complex", "id": "GO:0008352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008352", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" }, { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4HTH8", "url": "https://www.uniprot.org/uniprotkb/F4HTH8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "369", "end_pos": "369", "site_lbl": "Thr369", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 369, "start_aa": "Thr", "end_pos": 369, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr369", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "494", "end_pos": "494", "site_lbl": "Thr494", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 494, "start_aa": "Thr", "end_pos": 494, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr494", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "336", "end_pos": "336", "site_lbl": "Ser336", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Ser337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "338", "end_pos": "338", "site_lbl": "Ser338", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "492", "end_pos": "492", "site_lbl": "Ser492", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "588", "end_pos": "588", "site_lbl": "Ser588", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HTH8-1", "start_pos": "952", "end_pos": "952", "site_lbl": "Thr952", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTH8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTH8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HTM3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 852, "chemical_mass": 97634.0, "gene_names": "GCS1;F12B7.4;GCS1;KNF;KNOPF;MUC;RSW;T1F15.4;T1F15_4;glucosidase 1", "protein_name": "Mannosyl-oligosaccharide glucosidase GCS1", "disease": [], "molecular_function": [ { "name": "alpha-1,4-glucosidase activity", "id": "GO:0004558", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004558", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "Glc3Man9GlcNAc2 oligosaccharide glucosidase activity", "id": "GO:0004573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004573", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" } ], "biological_process": [ { "name": "protein N-linked glycosylation", "id": "GO:0006487", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006487", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "oligosaccharide metabolic process", "id": "GO:0009311", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009311", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "root epidermal cell differentiation", "id": "GO:0010053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010053", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" }, { "name": "plant epidermal cell differentiation", "id": "GO:0090627", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090627", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "282", "end_pos": "282", "site_lbl": "Asn282", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 282, "start_aa": "Asn", "end_pos": 282, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn282", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "552", "end_pos": "552", "site_lbl": "Asn552", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 552, "start_aa": "Asn", "end_pos": 552, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn552", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "570", "end_pos": "570", "site_lbl": "Asn570", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 570, "start_aa": "Asn", "end_pos": 570, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn570", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "633", "end_pos": "633", "site_lbl": "Asn633", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 633, "start_aa": "Asn", "end_pos": 633, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn633", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "662", "end_pos": "662", "site_lbl": "Asn662", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 662, "start_aa": "Asn", "end_pos": 662, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn662", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "730", "end_pos": "730", "site_lbl": "Asn730", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 730, "start_aa": "Asn", "end_pos": 730, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn730", "evidence": [ { "id": "F4HTM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HTM3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "15", "end_pos": "15", "site_lbl": "Ser15", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTM3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTM3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Ser26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTM3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTM3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "28", "end_pos": "28", "site_lbl": "Tyr28", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTM3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTM3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "718", "end_pos": "718", "site_lbl": "Ser718", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HTM3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HTM3" } ] } ] }, { "uniprot_canonical_ac": "F4HTM3-1", "start_pos": "504", "end_pos": "504", "site_lbl": "Gly504", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In knf-101/muc; semi-dwarf plants with abnormal cells shapes and altered epidermal cells arrangements, as well as short and hairy roots.", "evidence": [ { "database": "UniProtKB", "id": "F4HTM3", "url": "https://www.uniprot.org/uniprotkb/F4HTM3" }, { "database": "PubMed", "id": "18503769", "url": "https://glygen.org/publication/PubMed/18503769" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HU51-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 427, "chemical_mass": 48155.0, "gene_names": "ACH2;T1N6.10;T1N6.9;T1N6_10;T1N6_9", "protein_name": "Acyl-CoA hydrolase 2", "disease": [], "cellular_component": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" }, { "name": "peroxisomal matrix", "id": "GO:0005782", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005782", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" } ], "biological_process": [ { "name": "acyl-CoA metabolic process", "id": "GO:0006637", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006637", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" }, { "name": "fatty acid catabolic process", "id": "GO:0009062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009062", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" }, { "name": "protein homotetramerization", "id": "GO:0051289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051289", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" } ], "molecular_function": [ { "name": "fatty acyl-CoA hydrolase activity", "id": "GO:0047617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047617", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" }, { "name": "medium-chain fatty acyl-CoA hydrolase activity", "id": "GO:0052815", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052815", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" }, { "name": "long-chain fatty acyl-CoA hydrolase activity", "id": "GO:0052816", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052816", "evidence": [ { "database": "UniProtKB", "id": "F4HU51", "url": "https://www.uniprot.org/uniprotkb/F4HU51" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVG8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 611, "chemical_mass": 66843.0, "gene_names": "CSK;CSK;F12A21.3;F12A21_3;chloroplast sensor kinase", "protein_name": "Chloroplast sensor kinase, chloroplastic", "disease": [], "molecular_function": [ { "name": "non-membrane spanning protein tyrosine kinase activity", "id": "GO:0004715", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004715", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "3 iron, 4 sulfur cluster binding", "id": "GO:0051538", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051538", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "quinone binding", "id": "GO:0048038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048038", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "protein histidine kinase activity", "id": "GO:0004673", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004673", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" } ], "biological_process": [ { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "regulation of photosynthesis", "id": "GO:0010109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010109", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "detection of redox state", "id": "GO:0051776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051776", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "photosystem stoichiometry adjustment", "id": "GO:0080005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080005", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVG8-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Ser188", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4HVG8", "url": "https://www.uniprot.org/uniprotkb/F4HVG8" }, { "database": "PubMed", "id": "31925322", "url": "https://glygen.org/publication/PubMed/31925322" }, { "database": "iPTMnet", "id": "F4HVG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVG8" } ] } ] }, { "uniprot_canonical_ac": "F4HVG8-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Ser322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVG8" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4HVG8-1", "start_pos": "332", "end_pos": "332", "site_lbl": "Ser332", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVG8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVG8" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HVJ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 624, "chemical_mass": 70405.0, "gene_names": "POD1;POD1;POLLEN DEFECTIVE IN GUIDANCE 1;T23K23.19;T23K23_19", "protein_name": "Protein POLLEN DEFECTIVE IN GUIDANCE 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" }, { "name": "endoplasmic reticulum lumen", "id": "GO:0005788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005788", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" } ], "biological_process": [ { "name": "maintenance of protein localization in endoplasmic reticulum", "id": "GO:0035437", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035437", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" }, { "name": "pollen tube guidance", "id": "GO:0010183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010183", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HVJ3-1", "start_pos": "139", "end_pos": "139", "site_lbl": "Ser139", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HVJ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HVJ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HVJ3-1", "start_pos": "4", "end_pos": "4", "site_lbl": "Arg4", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on endoplasmic reticulum localization; when associated with A-8.", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" }, { "database": "PubMed", "id": "21954464", "url": "https://glygen.org/publication/PubMed/21954464" } ] } ] }, { "uniprot_canonical_ac": "F4HVJ3-1", "start_pos": "8", "end_pos": "8", "site_lbl": "Arg8", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on endoplasmic reticulum localization; when associated with A-4.", "evidence": [ { "database": "UniProtKB", "id": "F4HVJ3", "url": "https://www.uniprot.org/uniprotkb/F4HVJ3" }, { "database": "PubMed", "id": "21954464", "url": "https://glygen.org/publication/PubMed/21954464" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HW51-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1479, "chemical_mass": 168176.0, "gene_names": "ATRX;ATRX;CHR20;F22O13.8;F22O13_8", "protein_name": "Protein CHROMATIN REMODELING 20", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "ATP-dependent chromatin remodeler activity", "id": "GO:0140658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140658", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "chromosome, telomeric region", "id": "GO:0000781", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000781", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "maintenance of rDNA", "id": "GO:0043007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043007", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4HW51", "url": "https://www.uniprot.org/uniprotkb/F4HW51" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HW51-1", "start_pos": "672", "end_pos": "672", "site_lbl": "Ser672", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HW51", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HW51" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HXL0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 713, "chemical_mass": 78346.0, "gene_names": "PLIP2;T14P4.6;T14P4_6", "protein_name": "Phospholipase A1 PLIP2, chloroplastic", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "chloroplast membrane", "id": "GO:0031969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031969", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "defense response to insect", "id": "GO:0002213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002213", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "positive regulation of defense response", "id": "GO:0031349", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031349", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" } ], "molecular_function": [ { "name": "phospholipase A1 activity", "id": "GO:0008970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008970", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" }, { "name": "galactolipase activity", "id": "GO:0047714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047714", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HXL0-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Ser428", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes lipase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4HXL0", "url": "https://www.uniprot.org/uniprotkb/F4HXL0" }, { "database": "PubMed", "id": "29666162", "url": "https://glygen.org/publication/PubMed/29666162" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HXU3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 142, "chemical_mass": 16439.0, "gene_names": "KNATM;F10B6.16;F10B6_16;KNATM;KNOX Arabidopsis thaliana meinox", "protein_name": "Protein KNATM", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" }, { "name": "leaf proximal/distal pattern formation", "id": "GO:0010589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010589", "evidence": [ { "database": "UniProtKB", "id": "F4HXU3", "url": "https://www.uniprot.org/uniprotkb/F4HXU3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HXY7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 425, "chemical_mass": 49518.0, "gene_names": "PSS1;AtPSS1;F9L1.4;F9L1_4;PSS1;phosphatidylserine synthase 1", "protein_name": "CDP-diacylglycerol--serine O-phosphatidyltransferase 1", "disease": [], "molecular_function": [ { "name": "CDP-diacylglycerol-serine O-phosphatidyltransferase activity", "id": "GO:0003882", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003882", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "L-serine-phosphatidylethanolamine phosphatidyltransferase activity", "id": "GO:0106245", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106245", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" } ], "biological_process": [ { "name": "phosphatidylethanolamine biosynthetic process", "id": "GO:0006646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006646", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "phosphatidylserine biosynthetic process", "id": "GO:0006659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006659", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" }, { "name": "microsporogenesis", "id": "GO:0009556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009556", "evidence": [ { "database": "UniProtKB", "id": "F4HXY7", "url": "https://www.uniprot.org/uniprotkb/F4HXY7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HXZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 846, "chemical_mass": 95209.0, "gene_names": "BRO1;ALIX;F9L1.7;F9L1_7;SPHR1", "protein_name": "Vacuolar-sorting protein BRO1", "disease": [], "biological_process": [ { "name": "protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "id": "GO:0043328", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043328", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "vacuole organization", "id": "GO:0007033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007033", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "multivesicular body organization", "id": "GO:0036257", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036257", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "endosome to plasma membrane protein transport", "id": "GO:0099638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099638", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "multivesicular body", "id": "GO:0005771", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005771", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HXZ1-1", "start_pos": "212", "end_pos": "212", "site_lbl": "Thr212", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXZ1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HXZ1-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Ser5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXZ1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4HXZ1-1", "start_pos": "726", "end_pos": "726", "site_lbl": "Ser726", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXZ1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HXZ1-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HXZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HXZ1" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "F4HXZ1-1", "start_pos": "260", "end_pos": "260", "site_lbl": "Gly260", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "Reduces binding to VPS32.", "evidence": [ { "database": "UniProtKB", "id": "F4HXZ1", "url": "https://www.uniprot.org/uniprotkb/F4HXZ1" }, { "database": "PubMed", "id": "26324913", "url": "https://glygen.org/publication/PubMed/26324913" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HY56-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1705, "chemical_mass": 191990.0, "gene_names": "RLT1;F3M18.14;F3M18_14;HB-1;RINGLET 1;RLT1;homeobox-1", "protein_name": "Homeobox-DDT domain protein RLT1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "ISWI-type complex", "id": "GO:0031010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031010", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "F4HY56", "url": "https://www.uniprot.org/uniprotkb/F4HY56" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "304", "end_pos": "304", "site_lbl": "Thr304", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 304, "start_aa": "Thr", "end_pos": 304, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr304", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1256", "end_pos": "1256", "site_lbl": "Thr1256", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1257", "end_pos": "1257", "site_lbl": "Tyr1257", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1360", "end_pos": "1360", "site_lbl": "Ser1360", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1361", "end_pos": "1361", "site_lbl": "Ser1361", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1370", "end_pos": "1370", "site_lbl": "Thr1370", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1371", "end_pos": "1371", "site_lbl": "Ser1371", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1374", "end_pos": "1374", "site_lbl": "Ser1374", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "1589", "end_pos": "1589", "site_lbl": "Thr1589", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] }, { "uniprot_canonical_ac": "F4HY56-1", "start_pos": "321", "end_pos": "321", "site_lbl": "Ser321", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HY56" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HYF3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 401, "chemical_mass": 43900.0, "gene_names": "DCD;ACD1;F11A17.2;T1N15.3", "protein_name": "Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "cobalt ion binding", "id": "GO:0050897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050897", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "D-cysteine desulfhydrase activity", "id": "GO:0019148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019148", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" } ], "biological_process": [ { "name": "stress response to cadmium ion", "id": "GO:1990170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990170", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "ethylene biosynthetic process", "id": "GO:0009693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009693", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" }, { "name": "D-cysteine catabolic process", "id": "GO:0019447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019447", "evidence": [ { "database": "UniProtKB", "id": "F4HYF3", "url": "https://www.uniprot.org/uniprotkb/F4HYF3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HZD1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 944, "chemical_mass": 107230.0, "gene_names": "JMJ24;F7G19.7;F7G19_7", "protein_name": "E3 ubiquitin-protein ligase JMJ24", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "Ino80 complex", "id": "GO:0031011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031011", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "Set1C/COMPASS complex", "id": "GO:0048188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048188", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "negative regulation of DNA methylation-dependent heterochromatin formation", "id": "GO:0090310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090310", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "regulation of regulatory ncRNA processing", "id": "GO:0070920", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070920", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "ubiquitin conjugating enzyme binding", "id": "GO:0031624", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031624", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" }, { "name": "histone H3K9 demethylase activity", "id": "GO:0032454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032454", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Ser144", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Thr147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "181", "end_pos": "181", "site_lbl": "Thr181", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "278", "end_pos": "278", "site_lbl": "Ser278", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "709", "end_pos": "709", "site_lbl": "Ser709", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "93", "end_pos": "93", "site_lbl": "Ser93", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4HZD1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4HZD1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "243", "end_pos": "243", "site_lbl": "Cys243", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "S", "comment": "Impaired self-ubiquitination and E3 ubiquitin ligase activity; when associated with S-263.", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" }, { "database": "PubMed", "id": "26798133", "url": "https://glygen.org/publication/PubMed/26798133" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "244", "end_pos": "244", "site_lbl": "His244", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Impaired self-ubiquitination and E3 ubiquitin ligase activity; when associated with S-263.", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" }, { "database": "PubMed", "id": "26798133", "url": "https://glygen.org/publication/PubMed/26798133" } ] } ] }, { "uniprot_canonical_ac": "F4HZD1-1", "start_pos": "263", "end_pos": "263", "site_lbl": "Cys263", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "S", "comment": "Impaired self-ubiquitination and E3 ubiquitin ligase activity; when associated with S-243. Impaired self-ubiquitination and E3 ubiquitin ligase activity; when associated with A-244.", "evidence": [ { "database": "UniProtKB", "id": "F4HZD1", "url": "https://www.uniprot.org/uniprotkb/F4HZD1" }, { "database": "PubMed", "id": "26798133", "url": "https://glygen.org/publication/PubMed/26798133" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4HZG9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 493, "chemical_mass": 54982.0, "gene_names": "ICP55;T31J12.2;T31J12_2", "protein_name": "Intermediate cleaving peptidase 55, mitochondrial", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "protein stabilization", "id": "GO:0050821", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050821", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" } ], "molecular_function": [ { "name": "manganese ion binding", "id": "GO:0030145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030145", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "metalloaminopeptidase activity", "id": "GO:0070006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070006", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" }, { "name": "peptidase activity", "id": "GO:0008233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008233", "evidence": [ { "database": "UniProtKB", "id": "F4HZG9", "url": "https://www.uniprot.org/uniprotkb/F4HZG9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I065-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I065", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 888, "chemical_mass": 98867.0, "gene_names": "F27J15.13;F27J15_13", "protein_name": "non-specific serine/threonine protein kinase", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4I065", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I065", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4I065", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4I065", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I0K2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 614, "chemical_mass": 68980.0, "gene_names": "FLN2;F23O10.21;F4N2.16;F4N2_16;FLN2;PAP13;PFKB1;fructokinase-like 2", "protein_name": "Fructokinase-like 2, chloroplastic", "disease": [], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" }, { "name": "plastid transcription", "id": "GO:0042793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042793", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" }, { "name": "etioplast organization", "id": "GO:0009662", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009662", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" } ], "molecular_function": [ { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" } ], "cellular_component": [ { "name": "plastid-encoded plastid RNA polymerase complex", "id": "GO:0000427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000427", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "130", "end_pos": "130", "site_lbl": "Ser130", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0K2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Ser131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0K2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "305", "end_pos": "305", "site_lbl": "Thr305", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0K2" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "308", "end_pos": "308", "site_lbl": "Ser308", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0K2" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "309", "end_pos": "309", "site_lbl": "Thr309", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I0K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I0K2" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Cys208", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Strongly reduces the interaction with CITRX.", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" }, { "database": "PubMed", "id": "20511297", "url": "https://glygen.org/publication/PubMed/20511297" } ] } ] }, { "uniprot_canonical_ac": "F4I0K2-1", "start_pos": "209", "end_pos": "209", "site_lbl": "Cys209", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Strongly reduces the interaction with CITRX.", "evidence": [ { "database": "UniProtKB", "id": "F4I0K2", "url": "https://www.uniprot.org/uniprotkb/F4I0K2" }, { "database": "PubMed", "id": "20511297", "url": "https://glygen.org/publication/PubMed/20511297" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I1S7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 838, "chemical_mass": 92681.0, "gene_names": "ELP2;AtELP2;ELP2;Elongator subunit 2;F13F21.2;F14J22.24;GNS1;elongator protein 2", "protein_name": "Elongator complex protein 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "elongator holoenzyme complex", "id": "GO:0033588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033588", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "tRNA wobble uridine modification", "id": "GO:0002098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002098", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "positive regulation of defense response", "id": "GO:0031349", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031349", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "regulation of leaf development", "id": "GO:2000024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000024", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "negative regulation of anthocyanin metabolic process", "id": "GO:0031538", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031538", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" }, { "name": "regulation of primary metabolic process", "id": "GO:0080090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080090", "evidence": [ { "database": "UniProtKB", "id": "F4I1S7", "url": "https://www.uniprot.org/uniprotkb/F4I1S7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I1T7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1819, "chemical_mass": 192930.0, "gene_names": "NUP214;EMB1011;LNO1;LONO 1;T5A14.22;T5A14.5;embryo defective 1011", "protein_name": "Nuclear pore complex protein NUP214", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "zygote asymmetric cell division", "id": "GO:0010070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010070", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "mRNA transport", "id": "GO:0051028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051028", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "RNA export from nucleus", "id": "GO:0006405", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006405", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" } ], "molecular_function": [ { "name": "structural constituent of nuclear pore", "id": "GO:0017056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017056", "evidence": [ { "database": "UniProtKB", "id": "F4I1T7", "url": "https://www.uniprot.org/uniprotkb/F4I1T7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "1325", "end_pos": "1325", "site_lbl": "Thr1325", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1325, "start_aa": "Thr", "end_pos": 1325, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1325", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "1333", "end_pos": "1333", "site_lbl": "Thr1333", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1333, "start_aa": "Thr", "end_pos": 1333, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1333", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "1400", "end_pos": "1400", "site_lbl": "Thr1400", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1400, "start_aa": "Thr", "end_pos": 1400, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1400", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "1627", "end_pos": "1627", "site_lbl": "Thr1627", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1627, "start_aa": "Thr", "end_pos": 1627, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1627", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "612", "end_pos": "612", "site_lbl": "Ser612", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 612, "start_aa": "Ser", "end_pos": 612, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser612", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4I1T7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4I1T7" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "614", "end_pos": "614", "site_lbl": "Ser614", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 614, "start_aa": "Ser", "end_pos": 614, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser614", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4I1T7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4I1T7" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "620", "end_pos": "620", "site_lbl": "Ser620", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 620, "start_aa": "Ser", "end_pos": 620, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser620", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4I1T7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4I1T7" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "419", "end_pos": "419", "site_lbl": "Ser419", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "426", "end_pos": "426", "site_lbl": "Ser426", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "427", "end_pos": "427", "site_lbl": "Ser427", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Ser433", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "434", "end_pos": "434", "site_lbl": "Ser434", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Tyr441", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I1T7-1", "start_pos": "927", "end_pos": "927", "site_lbl": "Ser927", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I1T7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I1T7" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I2H7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 790, "chemical_mass": 90083.0, "gene_names": "TPX2;AtTPX2;F11M21.29;F21M11.31;F21M11_31;TPX2;targeting protein for XKLP2", "protein_name": "Protein TPX2", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "mitotic spindle assembly", "id": "GO:0090307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090307", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "regulation of mitotic spindle organization", "id": "GO:0060236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060236", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "spindle assembly", "id": "GO:0051225", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051225", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "nuclear microtubule", "id": "GO:0005880", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005880", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activator activity", "id": "GO:0043539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043539", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I2H7-1", "start_pos": "500", "end_pos": "500", "site_lbl": "Leu500", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "S", "comment": "Loss of export from the nucleus; when associated with H-506.", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" }, { "database": "PubMed", "id": "18941054", "url": "https://glygen.org/publication/PubMed/18941054" } ] } ] }, { "uniprot_canonical_ac": "F4I2H7-1", "start_pos": "506", "end_pos": "506", "site_lbl": "Leu506", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "H", "comment": "Loss of export from the nucleus; when associated with S-500.", "evidence": [ { "database": "UniProtKB", "id": "F4I2H7", "url": "https://www.uniprot.org/uniprotkb/F4I2H7" }, { "database": "PubMed", "id": "18941054", "url": "https://glygen.org/publication/PubMed/18941054" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I2J8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 716, "chemical_mass": 83434.0, "gene_names": "CTN;CACTIN;CTN;F21M11.16;F21M11_16", "protein_name": "Splicing factor Cactin", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" }, { "name": "mRNA cis splicing, via spliceosome", "id": "GO:0045292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045292", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "166", "end_pos": "166", "site_lbl": "Thr166", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Ser450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4I2J8", "url": "https://www.uniprot.org/uniprotkb/F4I2J8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "53", "end_pos": "53", "site_lbl": "Ser53", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "54", "end_pos": "54", "site_lbl": "Ser54", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "55", "end_pos": "55", "site_lbl": "Ser55", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] } ] }, { "uniprot_canonical_ac": "F4I2J8-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Ser82", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I2J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I2J8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I2N7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 977, "chemical_mass": 107450.0, "gene_names": "RLK7;F21M12.36;F21M12_36;LRR XI-23;RLK7;receptor-like kinase 7", "protein_name": "Receptor-like protein kinase 7", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "peptide binding", "id": "GO:0042277", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042277", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "peptide receptor activity", "id": "GO:0001653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001653", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "F4I2N7", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "119", "end_pos": "119", "site_lbl": "Asn119", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 119, "start_aa": "Asn", "end_pos": 119, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn119", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "152", "end_pos": "152", "site_lbl": "Asn152", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 152, "start_aa": "Asn", "end_pos": 152, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn152", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "167", "end_pos": "167", "site_lbl": "Asn167", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 167, "start_aa": "Asn", "end_pos": 167, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn167", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "204", "end_pos": "204", "site_lbl": "Asn204", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 204, "start_aa": "Asn", "end_pos": 204, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn204", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "252", "end_pos": "252", "site_lbl": "Asn252", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 252, "start_aa": "Asn", "end_pos": 252, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn252", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "268", "end_pos": "268", "site_lbl": "Asn268", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 268, "start_aa": "Asn", "end_pos": 268, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn268", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "318", "end_pos": "318", "site_lbl": "Asn318", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 318, "start_aa": "Asn", "end_pos": 318, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn318", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "373", "end_pos": "373", "site_lbl": "Asn373", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 373, "start_aa": "Asn", "end_pos": 373, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn373", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "399", "end_pos": "399", "site_lbl": "Asn399", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 399, "start_aa": "Asn", "end_pos": 399, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn399", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "536", "end_pos": "536", "site_lbl": "Asn536", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 536, "start_aa": "Asn", "end_pos": 536, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn536", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "577", "end_pos": "577", "site_lbl": "Asn577", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 577, "start_aa": "Asn", "end_pos": 577, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn577", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4I2N7-1", "start_pos": "73", "end_pos": "73", "site_lbl": "Asn73", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 73, "start_aa": "Asn", "end_pos": 73, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn73", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I316-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 660, "chemical_mass": 74184.0, "gene_names": "SUN3;AtSUN3;F19G10.15;SUN-domain protein 3;SUN3", "protein_name": "SUN domain-containing protein 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" } ], "biological_process": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4I316", "url": "https://www.uniprot.org/uniprotkb/F4I316" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I316-1", "start_pos": "128", "end_pos": "128", "site_lbl": "Thr128", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I316", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I316" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I3P9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 772, "chemical_mass": 85587.0, "gene_names": "MURE;ALBINO OR PALE-GREEN 13;APG13;ATMURE;F24D7.13;F24D7_13;MURE;PDE316;PIGMENT DEFECTIVE EMBRYO 316", "protein_name": "UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "acid-amino acid ligase activity", "id": "GO:0016881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016881", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "chloroplast fission", "id": "GO:0010020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010020", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I3P9-1", "start_pos": "194", "end_pos": "194", "site_lbl": "Ser194", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4I3P9", "url": "https://www.uniprot.org/uniprotkb/F4I3P9" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4I3P9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I3P9" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I3P9-1", "start_pos": "364", "end_pos": "364", "site_lbl": "Ser364", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I3P9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I3P9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I4F2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 499, "chemical_mass": 56130.0, "gene_names": "RHS3;AGC1-6;F3O9.24;F3O9_24;RHS4;ROOT HAIR SPECIFIC 4;RSH3;root hair specific 3", "protein_name": "Serine/threonine-protein kinase RHS3", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" } ], "biological_process": [ { "name": "root hair cell development", "id": "GO:0080147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080147", "evidence": [ { "database": "UniProtKB", "id": "F4I4F2", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I4F2-1", "start_pos": "333", "end_pos": "333", "site_lbl": "Ser333", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I4F2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I4F2" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4I4F2-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Ser335", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I4F2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I4F2" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I562-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 415, "chemical_mass": 46313.0, "gene_names": "AP3M;AP3M;F25P12.96;F25P12_96;ZIG SUPPRESSOR 4;ZIP4;adaptor protein-3 mu-adaptin", "protein_name": "AP-3 complex subunit mu", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" }, { "name": "AP-1 adaptor complex", "id": "GO:0030121", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030121", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" }, { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" }, { "name": "Golgi to vacuole transport", "id": "GO:0006896", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006896", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" }, { "name": "gravitropism", "id": "GO:0009630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009630", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" } ], "molecular_function": [ { "name": "clathrin adaptor activity", "id": "GO:0035615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035615", "evidence": [ { "database": "UniProtKB", "id": "F4I562", "url": "https://www.uniprot.org/uniprotkb/F4I562" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I5N6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 220, "chemical_mass": 24256.0, "gene_names": "RIC3;F19P19.8;F19P19_8;RIC3;ROP-interactive CRIB motif-containing protein 3", "protein_name": "CRIB domain-containing protein RIC3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of cytosolic calcium ion concentration", "id": "GO:0007204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007204", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "regulation of actin filament depolymerization", "id": "GO:0030834", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030834", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "positive regulation of calcium-mediated signaling", "id": "GO:0050850", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050850", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "establishment of vesicle localization", "id": "GO:0051650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051650", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "regulation of calcium-mediated signaling", "id": "GO:0050848", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050848", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "regulation of exocytosis", "id": "GO:0017157", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017157", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I5N6-1", "start_pos": "138", "end_pos": "138", "site_lbl": "Ser138", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I5N6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5N6" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] }, { "uniprot_canonical_ac": "F4I5N6-1", "start_pos": "186", "end_pos": "186", "site_lbl": "Ser186", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I5N6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5N6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4I5N6-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Thr32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I5N6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I5N6" } ] } ] }, { "uniprot_canonical_ac": "F4I5N6-1", "start_pos": "36", "end_pos": "36", "site_lbl": "His36", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "D", "comment": "Loss of interaction with ARAC11/ROP1; when associated with D39.", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" }, { "database": "PubMed", "id": "15824136", "url": "https://glygen.org/publication/PubMed/15824136" } ] } ] }, { "uniprot_canonical_ac": "F4I5N6-1", "start_pos": "39", "end_pos": "39", "site_lbl": "His39", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "D", "comment": "Loss of interaction with ARAC11/ROP1; when associated with D36.", "evidence": [ { "database": "UniProtKB", "id": "F4I5N6", "url": "https://www.uniprot.org/uniprotkb/F4I5N6" }, { "database": "PubMed", "id": "15824136", "url": "https://glygen.org/publication/PubMed/15824136" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I6G4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 819, "chemical_mass": 92809.0, "gene_names": "JMJ18;JMJ18;Jumonji domain-containing protein 18;T17H7.10;T17H7_10", "protein_name": "Lysine-specific demethylase JMJ18", "disease": [], "molecular_function": [ { "name": "histone H3K4me/H3K4me2/H3K4me3 demethylase activity", "id": "GO:0034647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034647", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "histone H3K4 demethylase activity", "id": "GO:0032453", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032453", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" }, { "name": "photoperiodism, flowering", "id": "GO:0048573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048573", "evidence": [ { "database": "UniProtKB", "id": "F4I6G4", "url": "https://www.uniprot.org/uniprotkb/F4I6G4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I6G4-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Ser35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I6G4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I6G4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4I6G4-1", "start_pos": "36", "end_pos": "36", "site_lbl": "Ser36", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I6G4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I6G4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I6G4-1", "start_pos": "595", "end_pos": "595", "site_lbl": "Ser595", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I6G4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I6G4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I6G4-1", "start_pos": "607", "end_pos": "607", "site_lbl": "Ser607", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I6G4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I6G4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I718-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2136, "chemical_mass": 231432.0, "gene_names": "CSI3;CELLULOSE SYNTHASE INTERACTIVE 3;CSI3;T5M16.5;T5M16_5", "protein_name": "Protein CELLULOSE SYNTHASE INTERACTIVE 3", "disease": [], "cellular_component": [ { "name": "cortical microtubule", "id": "GO:0055028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055028", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "cellulose synthase complex", "id": "GO:0010330", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010330", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "unidimensional cell growth", "id": "GO:0009826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009826", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "anisotropic cell growth", "id": "GO:0051211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051211", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "plant-type cell wall cellulose biosynthetic process", "id": "GO:0052324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052324", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "regulation of cellulose biosynthetic process", "id": "GO:2001006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001006", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" }, { "name": "protein localization to cortical microtubule cytoskeleton", "id": "GO:0072699", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072699", "evidence": [ { "database": "UniProtKB", "id": "F4I718", "url": "https://www.uniprot.org/uniprotkb/F4I718" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I718-1", "start_pos": "815", "end_pos": "815", "site_lbl": "Ser815", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I718", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I718" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4I718-1", "start_pos": "915", "end_pos": "915", "site_lbl": "Ser915", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I718", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I718" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4I718-1", "start_pos": "916", "end_pos": "916", "site_lbl": "Ser916", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I718", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I718" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I735-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1410, "chemical_mass": 159169.0, "gene_names": "PDS5B;T5M16.19;T5M16_19", "protein_name": "Sister chromatid cohesion protein PDS5 homolog B", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "proximal/distal pattern formation", "id": "GO:0009954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009954", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "homologous recombination", "id": "GO:0035825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035825", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" }, { "name": "leaf morphogenesis", "id": "GO:0009965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009965", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" } ], "molecular_function": [ { "name": "cohesin unloader activity", "id": "GO:0140670", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140670", "evidence": [ { "database": "UniProtKB", "id": "F4I735", "url": "https://www.uniprot.org/uniprotkb/F4I735" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I735-1", "start_pos": "527", "end_pos": "527", "site_lbl": "Ser527", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I735", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I735" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I7C7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 930, "chemical_mass": 103633.0, "gene_names": "WAPL1;AtWAPL1;T19D16.5;T19D16_5;WAPL1;Wings apart-like protein 1", "protein_name": "Wings apart-like protein 1", "disease": [], "biological_process": [ { "name": "meiotic sister chromatid cohesion involved in meiosis I", "id": "GO:0010789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010789", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "meiotic chromosome segregation", "id": "GO:0045132", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045132", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "mitotic sister chromatid segregation", "id": "GO:0000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000070", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "meiotic sister chromatid cohesion", "id": "GO:0051177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051177", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "meiotic sister chromatid segregation", "id": "GO:0045144", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045144", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F4I7C7", "url": "https://www.uniprot.org/uniprotkb/F4I7C7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I7C7-1", "start_pos": "127", "end_pos": "127", "site_lbl": "Tyr127", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7C7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4I7C7-1", "start_pos": "578", "end_pos": "578", "site_lbl": "Ser578", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7C7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I7C7-1", "start_pos": "670", "end_pos": "670", "site_lbl": "Ser670", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7C7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I7C7-1", "start_pos": "715", "end_pos": "715", "site_lbl": "Thr715", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7C7" } ] } ] }, { "uniprot_canonical_ac": "F4I7C7-1", "start_pos": "929", "end_pos": "929", "site_lbl": "Ser929", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7C7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7C7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I7I0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 543, "chemical_mass": 59821.0, "gene_names": "ALAAT1;ALANINE AMINOTRANSFERAS;AOAT4;AlaAT1;T13M22.3;T13M22_3;alanine aminotransferas", "protein_name": "Alanine aminotransferase 1, mitochondrial", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "L-alanine:2-oxoglutarate aminotransferase activity", "id": "GO:0004021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004021", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" } ], "biological_process": [ { "name": "response to hypoxia", "id": "GO:0001666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001666", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "response to cadmium ion", "id": "GO:0046686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046686", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" }, { "name": "L-alanine catabolic process, by transamination", "id": "GO:0019481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019481", "evidence": [ { "database": "UniProtKB", "id": "F4I7I0", "url": "https://www.uniprot.org/uniprotkb/F4I7I0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I7I0-1", "start_pos": "359", "end_pos": "359", "site_lbl": "Ser359", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7I0" } ] } ] }, { "uniprot_canonical_ac": "F4I7I0-1", "start_pos": "58", "end_pos": "58", "site_lbl": "Ser58", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I7I0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I7I0" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I902-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 420, "chemical_mass": 47577.0, "gene_names": "CHS1;CHILLING SENSITIVE 1;CHS1;F11A6.20;F11A6_20;F1L3.31", "protein_name": "Disease resistance protein CHS1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" }, { "name": "borate transport", "id": "GO:0046713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046713", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" } ], "molecular_function": [ { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I902-1", "start_pos": "10", "end_pos": "10", "site_lbl": "Ala10", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "T", "comment": "In chs1-1 and chs1-2; Increased leaves sensitivity to chilling stress in an EDS1- and PAD4-dependent manner, killed by several days of exposure to temperatures below 18 degrees Celsius. Alterations in photosynthetic complexes, chloroplast ultrastructure, and thylakoid membrane integrity and lipid composition precede leaf cell death. Leaf chlorosis and electrolyte leakage after exposure to chilling temperatures associated with abnormal steryl-esters accumulation and reduced sterols levels. Chilling leads to xanthophyll cycle activation and accumulation of tocopherol. Activation of immune responses by chilling; increased salicylic acid (SA) and hydrogen peroxide H(2)O(2) production, extensive cell death and pathogenesis-related (PR) genes expression at 13 degrees Celsius. Massive necrotic response to virulent Pseudomonas syringae pv. tomato infection, but normal bacterial proliferation. Increased permeability to boric acid.", "evidence": [ { "database": "UniProtKB", "id": "F4I902", "url": "https://www.uniprot.org/uniprotkb/F4I902" }, { "database": "PubMed", "id": "23617639", "url": "https://glygen.org/publication/PubMed/23617639" }, { "database": "PubMed", "id": "23651299", "url": "https://glygen.org/publication/PubMed/23651299" }, { "database": "PubMed", "id": "10811971", "url": "https://glygen.org/publication/PubMed/10811971" }, { "database": "PubMed", "id": "16667557", "url": "https://glygen.org/publication/PubMed/16667557" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I9A2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1767, "chemical_mass": 197632.0, "gene_names": "TNO1;F21J9.12;TGN-localized SYP41 interacting protein;TNO1", "protein_name": "Trans-Golgi network-localized SYP41-interacting protein 1", "disease": [], "biological_process": [ { "name": "vacuolar transport", "id": "GO:0007034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007034", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "response to lithium ion", "id": "GO:0010226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010226", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "regulation of cell morphogenesis", "id": "GO:0022604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022604", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "response to potassium ion", "id": "GO:0035864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035864", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "regulation of microtubule cytoskeleton organization", "id": "GO:0070507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070507", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "vesicle fusion", "id": "GO:0006906", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006906", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "protein targeting to vacuole", "id": "GO:0006623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006623", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "root morphogenesis", "id": "GO:0010015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010015", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "root epidermal cell differentiation", "id": "GO:0010053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010053", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "response to mannitol", "id": "GO:0010555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010555", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "circumnutation", "id": "GO:0010031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010031", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "trans-Golgi network membrane", "id": "GO:0032588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032588", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "F4I9A2", "url": "https://www.uniprot.org/uniprotkb/F4I9A2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1045", "end_pos": "1045", "site_lbl": "Ser1045", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1047", "end_pos": "1047", "site_lbl": "Thr1047", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1050", "end_pos": "1050", "site_lbl": "Ser1050", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "117", "end_pos": "117", "site_lbl": "Ser117", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "120", "end_pos": "120", "site_lbl": "Ser120", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1647", "end_pos": "1647", "site_lbl": "Ser1647", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1652", "end_pos": "1652", "site_lbl": "Ser1652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "1666", "end_pos": "1666", "site_lbl": "Ser1666", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Thr64", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "65", "end_pos": "65", "site_lbl": "Thr65", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I9A2-1", "start_pos": "99", "end_pos": "99", "site_lbl": "Thr99", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9A2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9A2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I9G2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 426, "chemical_mass": 48975.0, "gene_names": "ESV1;F7F22.5;F7F22_5;RGV1", "protein_name": "Protein EARLY STARVATION 1, chloroplastic", "disease": [], "molecular_function": [ { "name": "starch binding", "id": "GO:2001070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001070", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" } ], "biological_process": [ { "name": "starch metabolic process", "id": "GO:0005982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005982", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" }, { "name": "positive gravitropism", "id": "GO:0009958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009958", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" }, { "name": "negative gravitropism", "id": "GO:0009959", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009959", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" }, { "name": "regulation of alpha-glucan metabolic process", "id": "GO:0032948", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032948", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" }, { "name": "regulation of starch metabolic process", "id": "GO:2000904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000904", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" }, { "name": "starch grain", "id": "GO:0043036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043036", "evidence": [ { "database": "UniProtKB", "id": "F4I9G2", "url": "https://www.uniprot.org/uniprotkb/F4I9G2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I9G2-1", "start_pos": "297", "end_pos": "297", "site_lbl": "Thr297", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9G2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9G2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I9J7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 202, "chemical_mass": 22438.0, "gene_names": "Y14;F5D21.5;F5D21_5;RBM8;Y14", "protein_name": "RNA-binding protein Y14", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "exon-exon junction complex", "id": "GO:0035145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035145", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "regulation of translation", "id": "GO:0006417", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006417", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "id": "GO:0000184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000184", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" }, { "name": "mRNA transport", "id": "GO:0051028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051028", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I9J7-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Ser32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4I9J7", "url": "https://www.uniprot.org/uniprotkb/F4I9J7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4I9J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9J7" } ] } ] }, { "uniprot_canonical_ac": "F4I9J7-1", "start_pos": "51", "end_pos": "51", "site_lbl": "Ser51", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9J7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4I9J7-1", "start_pos": "74", "end_pos": "74", "site_lbl": "Ser74", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9J7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I9J7-1", "start_pos": "79", "end_pos": "79", "site_lbl": "Ser79", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9J7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4I9J7-1", "start_pos": "82", "end_pos": "82", "site_lbl": "Ser82", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9J7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9J7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4I9R1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4I9R1", "url": "https://www.uniprot.org/uniprotkb/F4I9R1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 374, "chemical_mass": 42101.0, "gene_names": "T15M6.12", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4I9R1", "url": "https://www.uniprot.org/uniprotkb/F4I9R1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4I9R1", "url": "https://www.uniprot.org/uniprotkb/F4I9R1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4I9R1-1", "start_pos": "353", "end_pos": "353", "site_lbl": "Ser353", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9R1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9R1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "F4I9R1-1", "start_pos": "62", "end_pos": "62", "site_lbl": "Thr62", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9R1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9R1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4I9R1-1", "start_pos": "86", "end_pos": "86", "site_lbl": "Ser86", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4I9R1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4I9R1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IAG2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1042, "chemical_mass": 118512.0, "gene_names": "SS3;ATSS3;F25C20.13;F25C20_13;SS3;STARCH SYNTHASE III;starch synthase 3", "protein_name": "Starch synthase 3, chloroplastic/amyloplastic", "disease": [], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" }, { "name": "alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity", "id": "GO:0004373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004373", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" }, { "name": "starch binding", "id": "GO:2001070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001070", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" }, { "name": "alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity", "id": "GO:0009011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009011", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" } ], "biological_process": [ { "name": "amylopectin biosynthetic process", "id": "GO:0010021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010021", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" }, { "name": "starch biosynthetic process", "id": "GO:0019252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019252", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" } ], "cellular_component": [ { "name": "amyloplast", "id": "GO:0009501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009501", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IAG2", "url": "https://www.uniprot.org/uniprotkb/F4IAG2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IAG2-1", "start_pos": "330", "end_pos": "330", "site_lbl": "Thr330", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAG2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IAG2-1", "start_pos": "543", "end_pos": "543", "site_lbl": "Ser543", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAG2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IAG2-1", "start_pos": "544", "end_pos": "544", "site_lbl": "Ser544", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAG2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IAG2-1", "start_pos": "548", "end_pos": "548", "site_lbl": "Thr548", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAG2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4IAG2-1", "start_pos": "93", "end_pos": "93", "site_lbl": "Ser93", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAG2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IAX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 677, "chemical_mass": 76674.0, "gene_names": "CuAOalpha2;CuAO8;F27M3.11;F27M3.12;F27M3_11", "protein_name": "Amine oxidase [copper-containing] alpha 2, peroxisomal", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "amine metabolic process", "id": "GO:0009308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009308", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "nitric oxide biosynthetic process", "id": "GO:0006809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006809", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "putrescine catabolic process", "id": "GO:0009447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009447", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "primary root development", "id": "GO:0080022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080022", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "response to putrescine", "id": "GO:1904585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904585", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "intracellular arginine homeostasis", "id": "GO:0090465", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090465", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" } ], "molecular_function": [ { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "primary methylamine oxidase activity", "id": "GO:0008131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008131", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "quinone binding", "id": "GO:0048038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048038", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" }, { "name": "aliphatic amine oxidase activity", "id": "GO:0052595", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052595", "evidence": [ { "database": "UniProtKB", "id": "F4IAX0", "url": "https://www.uniprot.org/uniprotkb/F4IAX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IAX1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 681, "chemical_mass": 76711.0, "gene_names": "CuAOalpha3;CuAO2;F27M3.10;F27M3.9;F27M3_9", "protein_name": "Amine oxidase [copper-containing] alpha 3, peroxisomal", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "amine metabolic process", "id": "GO:0009308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009308", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "putrescine catabolic process", "id": "GO:0009447", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009447", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to salicylic acid", "id": "GO:0009751", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009751", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "response to putrescine", "id": "GO:1904585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904585", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" } ], "molecular_function": [ { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "primary methylamine oxidase activity", "id": "GO:0008131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008131", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "quinone binding", "id": "GO:0048038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048038", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" }, { "name": "aliphatic amine oxidase activity", "id": "GO:0052595", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052595", "evidence": [ { "database": "UniProtKB", "id": "F4IAX1", "url": "https://www.uniprot.org/uniprotkb/F4IAX1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IAX1-1", "start_pos": "109", "end_pos": "109", "site_lbl": "Ser109", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IAX1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IAX1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IB81-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 651, "chemical_mass": 71445.0, "gene_names": "LYK3;AtLYK3;LYK3;LysM-containing receptor-like kinase 3;T14L22.13;T14L22_13", "protein_name": "LysM domain receptor-like kinase 3", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "transmembrane receptor protein kinase activity", "id": "GO:0019199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019199", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "positive regulation of abscisic acid-activated signaling pathway", "id": "GO:0009789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009789", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" }, { "name": "negative regulation of defense response", "id": "GO:0031348", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031348", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "100", "end_pos": "100", "site_lbl": "Asn100", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 100, "start_aa": "Asn", "end_pos": 100, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn100", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Thr102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 102, "start_aa": "Thr", "end_pos": 102, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr102", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "114", "end_pos": "114", "site_lbl": "Asn114", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 114, "start_aa": "Asn", "end_pos": 114, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn114", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "177", "end_pos": "177", "site_lbl": "Asn177", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 177, "start_aa": "Asn", "end_pos": 177, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn177", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Asn218", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 218, "start_aa": "Asn", "end_pos": 218, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn218", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "225", "end_pos": "225", "site_lbl": "Asn225", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 225, "start_aa": "Asn", "end_pos": 225, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn225", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "23", "end_pos": "23", "site_lbl": "Asn23", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 23, "start_aa": "Asn", "end_pos": 23, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn23", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "2", "end_pos": "2", "site_lbl": "Asn2", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 2, "start_aa": "Asn", "end_pos": 2, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn2", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Asn42", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 42, "start_aa": "Asn", "end_pos": 42, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn42", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "73", "end_pos": "73", "site_lbl": "Asn73", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 73, "start_aa": "Asn", "end_pos": 73, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn73", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "86", "end_pos": "86", "site_lbl": "Asn86", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 86, "start_aa": "Asn", "end_pos": 86, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn86", "evidence": [ { "id": "F4IB81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB81#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Ser289", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IB81", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IB81" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "330", "end_pos": "330", "site_lbl": "Thr330", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "410", "end_pos": "410", "site_lbl": "Tyr410", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Ser468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Ser498", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IB81", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IB81" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "500", "end_pos": "500", "site_lbl": "Thr500", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" }, { "database": "iPTMnet", "id": "F4IB81", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IB81" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "505", "end_pos": "505", "site_lbl": "Thr505", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ] } ] }, { "uniprot_canonical_ac": "F4IB81-1", "start_pos": "513", "end_pos": "513", "site_lbl": "Tyr513", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IB81", "url": "https://www.uniprot.org/uniprotkb/F4IB81" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ICF4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 343, "chemical_mass": 38222.0, "gene_names": "RBL10;ATRBL10;ATRBL7;AtRBL8;F4F7.32;F4F7_32;RBL10;RBL8;RHOMBOID-like protein 10;RHOMBOID-like protein 7;RHOMBOID-like protein 8", "protein_name": "RHOMBOID-like protein 10, chloroplastic", "disease": [], "biological_process": [ { "name": "phosphatidic acid metabolic process", "id": "GO:0046473", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046473", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" }, { "name": "phosphatidic acid biosynthetic process", "id": "GO:0006654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006654", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" }, { "name": "galactolipid metabolic process", "id": "GO:0019374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019374", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" } ], "molecular_function": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" }, { "name": "chloroplast membrane", "id": "GO:0031969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031969", "evidence": [ { "database": "UniProtKB", "id": "F4ICF4", "url": "https://www.uniprot.org/uniprotkb/F4ICF4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4ICF4-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Thr196", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 196, "start_aa": "Thr", "end_pos": 196, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr196", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ICK8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 502, "chemical_mass": 57425.0, "gene_names": "IWS1;ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6);ATIWS1;F3C3.8;F3C3_8;HIGH NITROGEN INSENSITIVE 9;HIN9;HNI9;IWS1;SEB1", "protein_name": "Protein IWS1 homolog 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" }, { "name": "signaling", "id": "GO:0023052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0023052", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription elongation", "id": "GO:0032784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032784", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" }, { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" } ], "molecular_function": [ { "name": "translation elongation factor activity", "id": "GO:0003746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003746", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "107", "end_pos": "107", "site_lbl": "Thr107", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Ser144", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "182", "end_pos": "182", "site_lbl": "Ser182", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "185", "end_pos": "185", "site_lbl": "Tyr185", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4ICK8", "url": "https://www.uniprot.org/uniprotkb/F4ICK8" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "193", "end_pos": "193", "site_lbl": "Ser193", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Thr195", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4ICK8-1", "start_pos": "197", "end_pos": "197", "site_lbl": "Tyr197", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4ICK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4ICK8" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ICX9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 759, "chemical_mass": 84376.0, "gene_names": "TSA1;AtTSA1;F19K6.14;F19K6_14;TSA1;TSK-associating protein 1", "protein_name": "TSK-associating protein 1", "disease": [], "cellular_component": [ { "name": "secretory vesicle", "id": "GO:0099503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099503", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "endoplasmic reticulum lumen", "id": "GO:0005788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005788", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "F4ICX9", "url": "https://www.uniprot.org/uniprotkb/F4ICX9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDB2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1325, "chemical_mass": 143310.0, "gene_names": "PHL;PHL;PHYTOCHROME-DEPENDENT LATE-FLOWERING;T10D10.14;T10D10.15;T10D10_14", "protein_name": "Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "SAGA complex", "id": "GO:0000124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000124", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" }, { "name": "long-day photoperiodism, flowering", "id": "GO:0048574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048574", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription coregulator activity", "id": "GO:0003712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003712", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "1121", "end_pos": "1121", "site_lbl": "Ser1121", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1121, "start_aa": "Ser", "end_pos": 1121, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1121", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IDB2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IDB2" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "1122", "end_pos": "1122", "site_lbl": "Ser1122", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1122, "start_aa": "Ser", "end_pos": 1122, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1122", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IDB2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IDB2" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "618", "end_pos": "618", "site_lbl": "Thr618", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 618, "start_aa": "Thr", "end_pos": 618, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr618", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4IDB2", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4IDB2" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "1259", "end_pos": "1259", "site_lbl": "Ser1259", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "19", "end_pos": "19", "site_lbl": "Ser19", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Thr235", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "24", "end_pos": "24", "site_lbl": "Thr24", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "27", "end_pos": "27", "site_lbl": "Ser27", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "536", "end_pos": "536", "site_lbl": "Ser536", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "547", "end_pos": "547", "site_lbl": "Ser547", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "553", "end_pos": "553", "site_lbl": "Ser553", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "622", "end_pos": "622", "site_lbl": "Ser622", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "626", "end_pos": "626", "site_lbl": "Ser626", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "641", "end_pos": "641", "site_lbl": "Ser641", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "832", "end_pos": "832", "site_lbl": "Ser832", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDB2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDB2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IDB2-1", "start_pos": "1026", "end_pos": "1026", "site_lbl": "Ala1026", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "V", "comment": "In phl-2; late flowering, especially under long-day conditions.", "evidence": [ { "database": "UniProtKB", "id": "F4IDB2", "url": "https://www.uniprot.org/uniprotkb/F4IDB2" }, { "database": "PubMed", "id": "24127609", "url": "https://glygen.org/publication/PubMed/24127609" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDC2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1043, "chemical_mass": 117024.0, "gene_names": "SWA2;EDA25;SLOW WALKER2;SWA2;T10D10.9;T10D10_9;embryo sac development arrest 25", "protein_name": "Protein SLOW WALKER 2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" }, { "name": "polar nucleus fusion", "id": "GO:0010197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010197", "evidence": [ { "database": "UniProtKB", "id": "F4IDC2", "url": "https://www.uniprot.org/uniprotkb/F4IDC2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "669", "end_pos": "669", "site_lbl": "Ser669", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "674", "end_pos": "674", "site_lbl": "Ser674", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "675", "end_pos": "675", "site_lbl": "Ser675", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "676", "end_pos": "676", "site_lbl": "Ser676", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "695", "end_pos": "695", "site_lbl": "Ser695", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IDC2-1", "start_pos": "856", "end_pos": "856", "site_lbl": "Thr856", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDC2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDC2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDS7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 988, "chemical_mass": 112320.0, "gene_names": "VPS18;F5O11.22;F5O11_22;T12C24.2", "protein_name": "Vacuolar sorting protein 18", "disease": [], "biological_process": [ { "name": "organelle fusion", "id": "GO:0048284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048284", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "endosome organization", "id": "GO:0007032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007032", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "vacuole organization", "id": "GO:0007033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007033", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "vesicle docking involved in exocytosis", "id": "GO:0006904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006904", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "root morphogenesis", "id": "GO:0010015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010015", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" } ], "cellular_component": [ { "name": "HOPS complex", "id": "GO:0030897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030897", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "CORVET complex", "id": "GO:0033263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033263", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "F4IDS7", "url": "https://www.uniprot.org/uniprotkb/F4IDS7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IDS7-1", "start_pos": "190", "end_pos": "190", "site_lbl": "Thr190", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 190, "start_aa": "Thr", "end_pos": 190, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr190", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IDS7-1", "start_pos": "983", "end_pos": "983", "site_lbl": "Thr983", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDS7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDS7" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IDS7-1", "start_pos": "985", "end_pos": "985", "site_lbl": "Ser985", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IDS7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IDS7" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDU4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 462, "chemical_mass": 52152.0, "gene_names": "LPCAT1;AtLPLAT1;LPCAT1;LPLAT1;T12C24.17;T12C24_17;lysophosphatidylcholine acyltransferase 1;lysophospholipid acyltransferase 1", "protein_name": "Lysophospholipid acyltransferase 1", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" } ], "biological_process": [ { "name": "triglyceride biosynthetic process", "id": "GO:0019432", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019432", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "phospholipid biosynthetic process", "id": "GO:0008654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008654", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "lipid modification", "id": "GO:0030258", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030258", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "galactolipid biosynthetic process", "id": "GO:0019375", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019375", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "glycerolipid biosynthetic process", "id": "GO:0045017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045017", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" } ], "molecular_function": [ { "name": "1-acylglycerophosphocholine O-acyltransferase activity", "id": "GO:0047184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047184", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "lysophospholipid acyltransferase activity", "id": "GO:0071617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071617", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "acyltransferase activity", "id": "GO:0016746", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016746", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "1-acylglycerophosphoethanolamine O-acyltransferase activity", "id": "GO:0106262", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106262", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" }, { "name": "1-acylglycerophosphoserine O-acyltransferase activity", "id": "GO:0106263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106263", "evidence": [ { "database": "UniProtKB", "id": "F4IDU4", "url": "https://www.uniprot.org/uniprotkb/F4IDU4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDW9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 250, "chemical_mass": 27894.0, "gene_names": "PTD;F13K23.4;F13K23_4", "protein_name": "Protein PARTING DANCERS", "disease": [], "biological_process": [ { "name": "resolution of meiotic recombination intermediates", "id": "GO:0000712", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000712", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "male meiotic nuclear division", "id": "GO:0007140", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007140", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "positive regulation of reciprocal meiotic recombination", "id": "GO:0010845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010845", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "reciprocal meiotic recombination", "id": "GO:0007131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007131", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "plant-type sporogenesis", "id": "GO:0048236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048236", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" } ], "molecular_function": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "F4IDW9", "url": "https://www.uniprot.org/uniprotkb/F4IDW9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IDY5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1254, "chemical_mass": 144092.0, "gene_names": "F14D16.3", "protein_name": "Zinc finger protein BRUTUS-like At1g18910", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular iron ion homeostasis", "id": "GO:0006879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006879", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "response to iron ion", "id": "GO:0010039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010039", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "iron ion import across plasma membrane", "id": "GO:0098711", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098711", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "cellular response to iron ion starvation", "id": "GO:0010106", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010106", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "cellular response to iron(II) ion", "id": "GO:0071282", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071282", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "regulation of iron ion transport", "id": "GO:0034756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034756", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" }, { "name": "iron import into cell", "id": "GO:0033212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033212", "evidence": [ { "database": "UniProtKB", "id": "F4IDY5", "url": "https://www.uniprot.org/uniprotkb/F4IDY5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IE66-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 717, "chemical_mass": 80515.0, "gene_names": "RID1;RID1;ROOT INITIATION DEFECTIVE 1;T1K7.25;T1K7_25", "protein_name": "Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "RNA helicase activity", "id": "GO:0003724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003724", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "regulation of RNA splicing", "id": "GO:0043484", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043484", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase I", "id": "GO:0045943", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045943", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IE66-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Thr102", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 102, "start_aa": "Thr", "end_pos": 102, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr102", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IE66-1", "start_pos": "29", "end_pos": "29", "site_lbl": "Ser29", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IE66", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IE66" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4IE66-1", "start_pos": "295", "end_pos": "295", "site_lbl": "Leu295", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "P", "comment": "In rid1-1; Reduced efficiency of pre-mRNA splicing.", "evidence": [ { "database": "UniProtKB", "id": "F4IE66", "url": "https://www.uniprot.org/uniprotkb/F4IE66" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IEB6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IEB6", "url": "https://www.uniprot.org/uniprotkb/F4IEB6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 213, "chemical_mass": 24315.0, "gene_names": "F6N18.8;F6N18_8", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IEB6", "url": "https://www.uniprot.org/uniprotkb/F4IEB6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IEM5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 410, "chemical_mass": 46451.0, "gene_names": "GCR2;F14G24.19;F14G24_19;G protein coupled receptor;G-PROTEIN COUPLED RECEPTOR 2;GCR2;GPCR", "protein_name": "LanC-like protein GCR2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "extrinsic component of membrane", "id": "GO:0019898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019898", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "abscisic acid binding", "id": "GO:0010427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010427", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" } ], "biological_process": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "peptide modification", "id": "GO:0031179", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031179", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "regulation of abscisic acid-activated signaling pathway", "id": "GO:0009787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009787", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" }, { "name": "maintenance of seed dormancy", "id": "GO:0010231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010231", "evidence": [ { "database": "UniProtKB", "id": "F4IEM5", "url": "https://www.uniprot.org/uniprotkb/F4IEM5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "254", "end_pos": "254", "site_lbl": "Thr254", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "256", "end_pos": "256", "site_lbl": "Ser256", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "265", "end_pos": "265", "site_lbl": "Ser265", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "270", "end_pos": "270", "site_lbl": "Ser270", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "271", "end_pos": "271", "site_lbl": "Ser271", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "274", "end_pos": "274", "site_lbl": "Ser274", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "276", "end_pos": "276", "site_lbl": "Ser276", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] }, { "uniprot_canonical_ac": "F4IEM5-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Ser37", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IEM5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IEM5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IF36-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1295, "chemical_mass": 143617.0, "gene_names": "FGT1;EMB1135;YUP8H12R.3;YUP8H12R_3;embryo defective 1135", "protein_name": "Protein FORGETTER 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "positive regulation of cellular response to heat", "id": "GO:1900036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900036", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "heat acclimation", "id": "GO:0010286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010286", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "chromatin DNA binding", "id": "GO:0031490", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031490", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" }, { "name": "promoter-specific chromatin binding", "id": "GO:1990841", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990841", "evidence": [ { "database": "UniProtKB", "id": "F4IF36", "url": "https://www.uniprot.org/uniprotkb/F4IF36" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "164", "end_pos": "164", "site_lbl": "Thr164", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 164, "start_aa": "Thr", "end_pos": 164, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr164", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "1186", "end_pos": "1186", "site_lbl": "Ser1186", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IF36", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IF36" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "633", "end_pos": "633", "site_lbl": "Ser633", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IF36", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IF36" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "637", "end_pos": "637", "site_lbl": "Ser637", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IF36", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IF36" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "647", "end_pos": "647", "site_lbl": "Ser647", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IF36", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IF36" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IF36-1", "start_pos": "649", "end_pos": "649", "site_lbl": "Ser649", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IF36", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IF36" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IHY7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 527, "chemical_mass": 60895.0, "gene_names": "PTAC12;HEMERA;HMR;PAP5;PTAC12;T31E10.2;T31E10_2;TAC12;plastid transcriptionally active 12", "protein_name": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "plastid-encoded plastid RNA polymerase complex", "id": "GO:0000427", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000427", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to temperature stimulus", "id": "GO:0009266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009266", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to UV", "id": "GO:0009411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009411", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "protein catabolic process", "id": "GO:0030163", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030163", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "UV protection", "id": "GO:0009650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009650", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "red, far-red light phototransduction", "id": "GO:0009585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009585", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to blue light", "id": "GO:0009637", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009637", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to red light", "id": "GO:0010114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010114", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to cytokinin", "id": "GO:0009735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009735", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "response to far red light", "id": "GO:0010218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010218", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "plastid transcription", "id": "GO:0042793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042793", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "regulation of plant organ morphogenesis", "id": "GO:1905421", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905421", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "positive regulation of red or far-red light signaling pathway", "id": "GO:0090228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090228", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" }, { "name": "positive regulation of thermomorphogenesis", "id": "GO:0140922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140922", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" } ], "molecular_function": [ { "name": "transcription regulator activator activity", "id": "GO:0140537", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140537", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IHY7-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Arg293", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "K", "comment": "Slightly weaker interaction with PHYA and PHYB and impaired light-mediated accumulation.", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" }, { "database": "PubMed", "id": "22895253", "url": "https://glygen.org/publication/PubMed/22895253" } ] } ] }, { "uniprot_canonical_ac": "F4IHY7-1", "start_pos": "516", "end_pos": "516", "site_lbl": "Asp516", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "Reduced transcriptional transactivation activity of PIFs target genes (class B) and hyposensitivity to red and far-red light due to impaired phyA and phyB signaling. Altered chloroplast biogenesis. Normal interaction with PIF proteins (e.g. PIF1 and PIF3), but defect in their degradation upon red light stimuli. Impaired ability to induce the accumulation of thermoresponsive genes and of PIF4.", "evidence": [ { "database": "UniProtKB", "id": "F4IHY7", "url": "https://www.uniprot.org/uniprotkb/F4IHY7" }, { "database": "PubMed", "id": "25944101", "url": "https://glygen.org/publication/PubMed/25944101" }, { "database": "PubMed", "id": "30635559", "url": "https://glygen.org/publication/PubMed/30635559" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IIM1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2150, "chemical_mass": 230706.0, "gene_names": "CSI1;CSI1;POM-POM 2;POM2;T16B14.2;cellulose synthase-interactive protein 1", "protein_name": "Protein CELLULOSE SYNTHASE INTERACTIVE 1", "disease": [], "cellular_component": [ { "name": "cortical microtubule", "id": "GO:0055028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055028", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cytoplasmic side of plasma membrane", "id": "GO:0009898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009898", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "microtubule minus-end", "id": "GO:0036449", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036449", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cellulose synthase complex", "id": "GO:0010330", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010330", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" } ], "molecular_function": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to calcium ion", "id": "GO:0051592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051592", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "regulation of microtubule cytoskeleton organization", "id": "GO:0070507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070507", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cortical microtubule organization", "id": "GO:0043622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043622", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cellulose biosynthetic process", "id": "GO:0030244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030244", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "plant-type primary cell wall biogenesis", "id": "GO:0009833", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009833", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "anther dehiscence", "id": "GO:0009901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009901", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "pollen wall assembly", "id": "GO:0010208", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010208", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "cellulose microfibril organization", "id": "GO:0010215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010215", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "gynoecium development", "id": "GO:0048467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048467", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "pollen tube development", "id": "GO:0048868", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048868", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "anisotropic cell growth", "id": "GO:0051211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051211", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "regulation of cellulose biosynthetic process", "id": "GO:2001006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001006", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" }, { "name": "protein localization to cortical microtubule cytoskeleton", "id": "GO:0072699", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072699", "evidence": [ { "database": "UniProtKB", "id": "F4IIM1", "url": "https://www.uniprot.org/uniprotkb/F4IIM1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Thr37", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 37, "start_aa": "Thr", "end_pos": 37, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr37", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "1403", "end_pos": "1403", "site_lbl": "Ser1403", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Ser160", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "185", "end_pos": "185", "site_lbl": "Ser185", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Ser20", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Ser40", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Thr42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "50", "end_pos": "50", "site_lbl": "Thr50", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "51", "end_pos": "51", "site_lbl": "Thr51", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Ser52", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "59", "end_pos": "59", "site_lbl": "Thr59", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "62", "end_pos": "62", "site_lbl": "Ser62", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4IIM1-1", "start_pos": "637", "end_pos": "637", "site_lbl": "Ser637", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IIM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IIM1" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IMH3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 577, "chemical_mass": 65348.0, "gene_names": "NOC4;EMB2762;EMBRYO DEFECTIVE 2762;NOC4;NucleOlar Complex associated 4;T23A1.11;T23A1_11", "protein_name": "Protein NUCLEOLAR COMPLEX ASSOCIATED 4", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "Noc4p-Nop14p complex", "id": "GO:0030692", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030692", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "small-subunit processome", "id": "GO:0032040", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032040", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" } ], "biological_process": [ { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4IMH3", "url": "https://www.uniprot.org/uniprotkb/F4IMH3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IMH3-1", "start_pos": "140", "end_pos": "140", "site_lbl": "Ser140", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMH3" } ] } ] }, { "uniprot_canonical_ac": "F4IMH3-1", "start_pos": "141", "end_pos": "141", "site_lbl": "Ser141", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMH3" } ] } ] }, { "uniprot_canonical_ac": "F4IMH3-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMH3" } ] } ] }, { "uniprot_canonical_ac": "F4IMH3-1", "start_pos": "265", "end_pos": "265", "site_lbl": "Ser265", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IMH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IMH3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IN69-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1275, "chemical_mass": 139564.0, "gene_names": "MED33B;F11L15.1;MED24B;MED33B;MED5B;MED5_1;REDUCED EPIDERMAL FLUORESCENCE 4;REF4;T9J23.25;T9J23.26", "protein_name": "Mediator of RNA polymerase II transcription subunit 33B", "disease": [], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "pmid": "" }, { "name": "phenylpropanoid metabolic process", "id": "GO:0009698", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009698", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "pmid": "" }, { "name": "regulation of phenylpropanoid metabolic process", "id": "GO:2000762", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000762", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "pmid": "" }, { "name": "mediator complex", "id": "GO:0016592", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016592", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "190", "end_pos": "190", "site_lbl": "Ser190", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IN69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IN69" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "191", "end_pos": "191", "site_lbl": "Ser191", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IN69", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IN69" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "357", "end_pos": "357", "site_lbl": "Gly357", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "S", "comment": "In ref4-3; Semidominant dwarfing and decreased accumulation of phenylpropanoids. Reduced phenotype; when associated with H-361. No effect; when associated with L-873.", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" }, { "database": "PubMed", "id": "18430946", "url": "https://glygen.org/publication/PubMed/18430946" } ] } ] }, { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "361", "end_pos": "361", "site_lbl": "Arg361", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "H", "comment": "Partial reversion back to wild-type phenotype; when associated with S-357.", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" }, { "database": "PubMed", "id": "22167189", "url": "https://glygen.org/publication/PubMed/22167189" } ] } ] }, { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "601", "end_pos": "601", "site_lbl": "Asp601", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In ref4-1; Semidominant dwarfing and decreased accumulation of phenylpropanoids.", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" }, { "database": "PubMed", "id": "18430946", "url": "https://glygen.org/publication/PubMed/18430946" } ] } ] }, { "uniprot_canonical_ac": "F4IN69-1", "start_pos": "873", "end_pos": "873", "site_lbl": "Pro873", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "Reversion back to wild-type phenotype; when associated with S-357.", "evidence": [ { "database": "UniProtKB", "id": "F4IN69", "url": "https://www.uniprot.org/uniprotkb/F4IN69" }, { "database": "PubMed", "id": "18430946", "url": "https://glygen.org/publication/PubMed/18430946" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IPE3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 445, "chemical_mass": 50140.0, "gene_names": "SGR5;ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15;ATIDD15;F14H20.1;F14H20_1;IDD15;INDETERMINATE(ID)-DOMAIN 15;SGR5;SHOOT GRAVITROPISM 5", "protein_name": "Zinc finger protein SHOOT GRAVITROPISM 5", "disease": [], "biological_process": [ { "name": "detection of gravity", "id": "GO:0009590", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009590", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "gravitropism", "id": "GO:0009630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009630", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "negative gravitropism", "id": "GO:0009959", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009959", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "leaf morphogenesis", "id": "GO:0009965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009965", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "positive regulation of auxin biosynthetic process", "id": "GO:0010601", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010601", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "floral organ morphogenesis", "id": "GO:0048444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048444", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "regulation of auxin polar transport", "id": "GO:2000012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000012", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "circumnutation", "id": "GO:0010031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010031", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "regulation of starch metabolic process", "id": "GO:2000904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000904", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IPE3-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Asp165", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In sgr5-1; weak gravitropic responses in inflorescence stems.", "evidence": [ { "database": "UniProtKB", "id": "F4IPE3", "url": "https://www.uniprot.org/uniprotkb/F4IPE3" }, { "database": "PubMed", "id": "16813575", "url": "https://glygen.org/publication/PubMed/16813575" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IPK2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 268, "chemical_mass": 30363.0, "gene_names": "TAF14;T27K22.13;T27K22_13;TAF14;TBP-associated factor 14;YAF9B;YAF9b;homolog of yeast YAF9 b", "protein_name": "Transcription initiation factor TFIID subunit 14", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "NuA4 histone acetyltransferase complex", "id": "GO:0035267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035267", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "regulation of photoperiodism, flowering", "id": "GO:2000028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000028", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" } ], "molecular_function": [ { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4IPK2", "url": "https://www.uniprot.org/uniprotkb/F4IPK2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IPY2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 563, "chemical_mass": 63914.0, "gene_names": "SYCO;FIONA;SYCO ARATH;T16B12.16;cysteinyl t-RNA synthetase", "protein_name": "Cysteine--tRNA ligase, chloroplastic/mitochondrial", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "cysteine-tRNA ligase activity", "id": "GO:0004817", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004817", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" } ], "biological_process": [ { "name": "cristae formation", "id": "GO:0042407", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042407", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "regulation of programmed cell death", "id": "GO:0043067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043067", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "cysteinyl-tRNA aminoacylation", "id": "GO:0006423", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006423", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" }, { "name": "polar nucleus fusion", "id": "GO:0010197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010197", "evidence": [ { "database": "UniProtKB", "id": "F4IPY2", "url": "https://www.uniprot.org/uniprotkb/F4IPY2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IPY2-1", "start_pos": "47", "end_pos": "47", "site_lbl": "Thr47", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IPY2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IPY2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IQV7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 575, "chemical_mass": 64711.0, "gene_names": "SCY2;EMB2289;EMBRYO DEFECTIVE 2289;SCY2;SECY HOMOLOG 2;T9H9.5;T9H9_5", "protein_name": "Preprotein translocase subunit SCY2, chloroplastic", "disease": [], "molecular_function": [ { "name": "signal sequence binding", "id": "GO:0005048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005048", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "protein transmembrane transporter activity", "id": "GO:0008320", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008320", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" } ], "biological_process": [ { "name": "SRP-dependent cotranslational protein targeting to membrane, translocation", "id": "GO:0006616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006616", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "thylakoid membrane organization", "id": "GO:0010027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010027", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "protein localization to chloroplast", "id": "GO:0072598", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072598", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "plastid envelope", "id": "GO:0009526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009526", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "chloroplast membrane", "id": "GO:0031969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031969", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" }, { "name": "amyloplast membrane", "id": "GO:0033097", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033097", "evidence": [ { "database": "UniProtKB", "id": "F4IQV7", "url": "https://www.uniprot.org/uniprotkb/F4IQV7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IRR2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1040, "chemical_mass": 119247.0, "gene_names": "SAD2;EMA1;SAD2;SUPER SENSITIVE TO ABA AND DROUGHT2;T9H9.18;T9H9_18;UNARMED 9;URM9;enhanced miRNA activity 1", "protein_name": "Importin beta-like SAD2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" } ], "molecular_function": [ { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" }, { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" } ], "biological_process": [ { "name": "protein import into nucleus", "id": "GO:0006606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "evidence": [ { "database": "UniProtKB", "id": "F4IRR2", "url": "https://www.uniprot.org/uniprotkb/F4IRR2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ISV9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 399, "chemical_mass": 44536.0, "gene_names": "APD4;ABERRANT POLLEN DEVELOPMENT 4;APD4;F16M14.13", "protein_name": "E3 ubiquitin-protein ligase APD4", "disease": [], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "positive regulation of mitotic cell cycle", "id": "GO:0045931", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045931", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4ISV9", "url": "https://www.uniprot.org/uniprotkb/F4ISV9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4ITM1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 398, "chemical_mass": 44554.0, "gene_names": "RSL1;RSL1;Ring finger of Seed Longevity 1;T19L18.6;T19L18_6", "protein_name": "E3 ubiquitin-protein ligase RSL1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "ubiquitin ligase complex", "id": "GO:0000151", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000151", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "ubiquitin conjugating enzyme binding", "id": "GO:0031624", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031624", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" } ], "biological_process": [ { "name": "protein polyubiquitination", "id": "GO:0000209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000209", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "gibberellic acid mediated signaling pathway", "id": "GO:0009740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009740", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "negative regulation of abscisic acid-activated signaling pathway", "id": "GO:0009788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009788", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "seed maturation", "id": "GO:0010431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010431", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "gibberellin mediated signaling pathway", "id": "GO:0010476", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010476", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" }, { "name": "acquisition of seed longevity", "id": "GO:0140547", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140547", "evidence": [ { "database": "UniProtKB", "id": "F4ITM1", "url": "https://www.uniprot.org/uniprotkb/F4ITM1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IUX6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1181, "chemical_mass": 133962.0, "gene_names": "UPF2;T16B24.10;T16B24_10", "protein_name": "Regulator of nonsense transcripts UPF2", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "exon-exon junction complex", "id": "GO:0035145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035145", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "long-day photoperiodism", "id": "GO:0048571", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048571", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "id": "GO:0000184", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000184", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "salicylic acid mediated signaling pathway", "id": "GO:0009863", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009863", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" }, { "name": "jasmonic acid mediated signaling pathway", "id": "GO:0009867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009867", "evidence": [ { "database": "UniProtKB", "id": "F4IUX6", "url": "https://www.uniprot.org/uniprotkb/F4IUX6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "1175", "end_pos": "1175", "site_lbl": "Ser1175", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "331", "end_pos": "331", "site_lbl": "Ser331", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "921", "end_pos": "921", "site_lbl": "Ser921", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "922", "end_pos": "922", "site_lbl": "Ser922", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "926", "end_pos": "926", "site_lbl": "Ser926", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IUX6-1", "start_pos": "985", "end_pos": "985", "site_lbl": "Ser985", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IUX6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IUX6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IV16-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 267, "chemical_mass": 30214.0, "gene_names": "TPK2;F16B22.24;TPK2;thiamin pyrophosphokinase 2", "protein_name": "Thiamine pyrophosphokinase 2", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" }, { "name": "thiamine diphosphokinase activity", "id": "GO:0004788", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004788", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" }, { "name": "thiamine binding", "id": "GO:0030975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030975", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" } ], "biological_process": [ { "name": "thiamine diphosphate biosynthetic process", "id": "GO:0009229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009229", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" }, { "name": "thiamine metabolic process", "id": "GO:0006772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006772", "evidence": [ { "database": "UniProtKB", "id": "F4IV16", "url": "https://www.uniprot.org/uniprotkb/F4IV16" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IV66-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1001, "chemical_mass": 111552.0, "gene_names": "RNE;G;RNAse E/G-like;RNEE/G;RNE;RNase E;T23O15.10;T23O15_10", "protein_name": "Ribonuclease E/G-like protein, chloroplastic", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "RNA nuclease activity", "id": "GO:0004540", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004540", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "starch binding", "id": "GO:2001070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001070", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" } ], "biological_process": [ { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "chloroplast mRNA processing", "id": "GO:0010239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010239", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" }, { "name": "chloroplast rRNA processing", "id": "GO:1901259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901259", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IV66-1", "start_pos": "213", "end_pos": "213", "site_lbl": "Thr213", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 213, "start_aa": "Thr", "end_pos": 213, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr213", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IV66-1", "start_pos": "551", "end_pos": "551", "site_lbl": "Lys551", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Loss of endonucleolytic activity; when associated with A-557.", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" }, { "database": "PubMed", "id": "18441049", "url": "https://glygen.org/publication/PubMed/18441049" } ] } ] }, { "uniprot_canonical_ac": "F4IV66-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Lys557", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Loss of endonucleolytic activity; when associated with A-551.", "evidence": [ { "database": "UniProtKB", "id": "F4IV66", "url": "https://www.uniprot.org/uniprotkb/F4IV66" }, { "database": "PubMed", "id": "18441049", "url": "https://glygen.org/publication/PubMed/18441049" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IVI0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 525, "chemical_mass": 61123.0, "gene_names": "BUB1;F23N11.4;F23N11_4", "protein_name": "Mitotic checkpoint serine/threonine-protein kinase BUB1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "outer kinetochore", "id": "GO:0000940", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000940", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" } ], "biological_process": [ { "name": "chromosome segregation", "id": "GO:0007059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007059", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "meiotic sister chromatid cohesion, centromeric", "id": "GO:0051754", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051754", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" }, { "name": "mitotic spindle assembly checkpoint signaling", "id": "GO:0007094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007094", "evidence": [ { "database": "UniProtKB", "id": "F4IVI0", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IVL6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2554, "chemical_mass": 279073.0, "gene_names": "GRV2;F12C20.7;F12C20_7;GFS2;GRAVITROPISM DEFECTIVE 2;GRV2;KAM2;KATAMARI2", "protein_name": "DnaJ homolog subfamily C GRV2", "disease": [], "biological_process": [ { "name": "regulation of early endosome to late endosome transport", "id": "GO:2000641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000641", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "embryonic axis specification", "id": "GO:0000578", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000578", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "response to starvation", "id": "GO:0042594", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042594", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "endosome organization", "id": "GO:0007032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007032", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "receptor-mediated endocytosis", "id": "GO:0006898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006898", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "vacuole organization", "id": "GO:0007033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007033", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "late endosome to vacuole transport", "id": "GO:0045324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045324", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "protein targeting to vacuole", "id": "GO:0006623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006623", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "phototropism", "id": "GO:0009638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009638", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "amyloplast organization", "id": "GO:0009660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009660", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "negative gravitropism", "id": "GO:0009959", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009959", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "late endosome membrane", "id": "GO:0031902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031902", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "vacuolar membrane", "id": "GO:0005774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005774", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "F4IVL6", "url": "https://www.uniprot.org/uniprotkb/F4IVL6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IVL6-1", "start_pos": "1512", "end_pos": "1512", "site_lbl": "Ser1512", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVL6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVL6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IVL6-1", "start_pos": "1513", "end_pos": "1513", "site_lbl": "Ser1513", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVL6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVL6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IVL6-1", "start_pos": "1838", "end_pos": "1838", "site_lbl": "Thr1838", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVL6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVL6" } ] } ] }, { "uniprot_canonical_ac": "F4IVL6-1", "start_pos": "1843", "end_pos": "1843", "site_lbl": "Ser1843", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVL6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVL6" } ] } ] }, { "uniprot_canonical_ac": "F4IVL6-1", "start_pos": "1900", "end_pos": "1900", "site_lbl": "Ser1900", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IVL6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IVL6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IVV0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 224, "chemical_mass": 24140.0, "gene_names": "RIC1;F4P9.23;F4P9_23;RIC1;ROP-interactive CRIB motif-containing protein 1", "protein_name": "CRIB domain-containing protein RIC1", "disease": [], "cellular_component": [ { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" }, { "name": "cortical microtubule, transverse to long axis", "id": "GO:0010005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010005", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" } ], "biological_process": [ { "name": "cell morphogenesis", "id": "GO:0000902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000902", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" }, { "name": "cytoplasmic microtubule organization", "id": "GO:0031122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031122", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" }, { "name": "cellulose microfibril organization", "id": "GO:0010215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010215", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IVV0-1", "start_pos": "37", "end_pos": "37", "site_lbl": "His37", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "D", "comment": "Loss of interaction with ARAC11/ROP1.", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" }, { "database": "PubMed", "id": "11752391", "url": "https://glygen.org/publication/PubMed/11752391" } ] } ] }, { "uniprot_canonical_ac": "F4IVV0-1", "start_pos": "40", "end_pos": "40", "site_lbl": "His40", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "D", "comment": "Loss of interaction with ARAC11/ROP1; when associated with D37.", "evidence": [ { "database": "UniProtKB", "id": "F4IVV0", "url": "https://www.uniprot.org/uniprotkb/F4IVV0" }, { "database": "PubMed", "id": "11752391", "url": "https://glygen.org/publication/PubMed/11752391" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IW47-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 741, "chemical_mass": 79922.0, "gene_names": "TKL-2;F4L23.20;TKL2;transketolase 2", "protein_name": "Transketolase-2, chloroplastic", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "transketolase activity", "id": "GO:0004802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004802", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" } ], "biological_process": [ { "name": "pentose-phosphate shunt", "id": "GO:0006098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006098", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" }, { "name": "reductive pentose-phosphate cycle", "id": "GO:0019253", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019253", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IW47-1", "start_pos": "338", "end_pos": "338", "site_lbl": "Ser338", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IW47", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IW47" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IW47-1", "start_pos": "398", "end_pos": "398", "site_lbl": "Tyr398", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IW47", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IW47" } ] } ] }, { "uniprot_canonical_ac": "F4IW47-1", "start_pos": "428", "end_pos": "428", "site_lbl": "Ser428", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4IW47", "url": "https://www.uniprot.org/uniprotkb/F4IW47" }, { "database": "iPTMnet", "id": "F4IW47", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IW47" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4IW47-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Ser437", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IW47", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IW47" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IXW2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1739, "chemical_mass": 192883.0, "gene_names": "BIG5;ATMIN7;BEN1;BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1;F7K15_150;HOPM interactor 7;MIN7", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 5", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "early endosome membrane", "id": "GO:0031901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031901", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "immune response", "id": "GO:0006955", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006955", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "regulation of vesicle fusion", "id": "GO:0031338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031338", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "regulation of ARF protein signal transduction", "id": "GO:0032012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032012", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "regulation of auxin polar transport", "id": "GO:2000012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000012", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" } ], "molecular_function": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F4IXW2", "url": "https://www.uniprot.org/uniprotkb/F4IXW2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1300", "end_pos": "1300", "site_lbl": "Ser1300", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1416", "end_pos": "1416", "site_lbl": "Ser1416", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1418", "end_pos": "1418", "site_lbl": "Ser1418", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1435", "end_pos": "1435", "site_lbl": "Ser1435", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1439", "end_pos": "1439", "site_lbl": "Ser1439", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1465", "end_pos": "1465", "site_lbl": "Ser1465", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1466", "end_pos": "1466", "site_lbl": "Ser1466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1484", "end_pos": "1484", "site_lbl": "Thr1484", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1499", "end_pos": "1499", "site_lbl": "Thr1499", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1504", "end_pos": "1504", "site_lbl": "Ser1504", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1505", "end_pos": "1505", "site_lbl": "Ser1505", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1510", "end_pos": "1510", "site_lbl": "Thr1510", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1513", "end_pos": "1513", "site_lbl": "Ser1513", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1514", "end_pos": "1514", "site_lbl": "Ser1514", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1516", "end_pos": "1516", "site_lbl": "Tyr1516", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "1522", "end_pos": "1522", "site_lbl": "Thr1522", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "245", "end_pos": "245", "site_lbl": "Thr245", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "247", "end_pos": "247", "site_lbl": "Ser247", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Ser258", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "504", "end_pos": "504", "site_lbl": "Ser504", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "554", "end_pos": "554", "site_lbl": "Ser554", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "556", "end_pos": "556", "site_lbl": "Ser556", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Thr557", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "798", "end_pos": "798", "site_lbl": "Ser798", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4IXW2-1", "start_pos": "8", "end_pos": "8", "site_lbl": "Thr8", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IXW2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IXW2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IY62-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 883, "chemical_mass": 99043.0, "gene_names": "UGP3;F27K19_220;UDP-glucose pyrophosphorylase 3;UGP3", "protein_name": "UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic", "disease": [], "biological_process": [ { "name": "UDP-N-acetylglucosamine biosynthetic process", "id": "GO:0006048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006048", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" }, { "name": "UDP-alpha-D-glucose metabolic process", "id": "GO:0006011", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006011", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" }, { "name": "sulfolipid biosynthetic process", "id": "GO:0046506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046506", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" } ], "molecular_function": [ { "name": "UTP:glucose-1-phosphate uridylyltransferase activity", "id": "GO:0003983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003983", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" }, { "name": "UDP-N-acetylglucosamine diphosphorylase activity", "id": "GO:0003977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003977", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4IY62", "url": "https://www.uniprot.org/uniprotkb/F4IY62" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IY62-1", "start_pos": "79", "end_pos": "79", "site_lbl": "Thr79", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 79, "start_aa": "Thr", "end_pos": 79, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr79", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IYM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 896, "chemical_mass": 99711.0, "gene_names": "DEX1;DEFECTIVE IN EXINE FORMATION 1;DEX1;MZB10.12", "protein_name": "Protein DEFECTIVE IN EXINE FORMATION 1", "disease": [], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "Golgi cis cisterna", "id": "GO:0000137", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000137", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" } ], "biological_process": [ { "name": "cell wall organization", "id": "GO:0071555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071555", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "pollen wall assembly", "id": "GO:0010208", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010208", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" }, { "name": "pollen exine formation", "id": "GO:0010584", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010584", "evidence": [ { "database": "UniProtKB", "id": "F4IYM4", "url": "https://www.uniprot.org/uniprotkb/F4IYM4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "204", "end_pos": "204", "site_lbl": "Asn204", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 204, "start_aa": "Asn", "end_pos": 204, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn204", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Asn20", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 20, "start_aa": "Asn", "end_pos": 20, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn20", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Asn211", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 211, "start_aa": "Asn", "end_pos": 211, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn211", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "239", "end_pos": "239", "site_lbl": "Asn239", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 239, "start_aa": "Asn", "end_pos": 239, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn239", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "253", "end_pos": "253", "site_lbl": "Asn253", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 253, "start_aa": "Asn", "end_pos": 253, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn253", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Asn266", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 266, "start_aa": "Asn", "end_pos": 266, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn266", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "279", "end_pos": "279", "site_lbl": "Asn279", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 279, "start_aa": "Asn", "end_pos": 279, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn279", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "295", "end_pos": "295", "site_lbl": "Asn295", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 295, "start_aa": "Asn", "end_pos": 295, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn295", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "302", "end_pos": "302", "site_lbl": "Asn302", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 302, "start_aa": "Asn", "end_pos": 302, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn302", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "307", "end_pos": "307", "site_lbl": "Asn307", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 307, "start_aa": "Asn", "end_pos": 307, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn307", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "317", "end_pos": "317", "site_lbl": "Asn317", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 317, "start_aa": "Asn", "end_pos": 317, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn317", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "615", "end_pos": "615", "site_lbl": "Thr615", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 615, "start_aa": "Thr", "end_pos": 615, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr615", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "789", "end_pos": "789", "site_lbl": "Asn789", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 789, "start_aa": "Asn", "end_pos": 789, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn789", "evidence": [ { "id": "F4IYM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IYM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "807", "end_pos": "807", "site_lbl": "Thr807", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYM4" } ] } ] }, { "uniprot_canonical_ac": "F4IYM4-1", "start_pos": "812", "end_pos": "812", "site_lbl": "Tyr812", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4IYM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4IYM4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4IZR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1076, "chemical_mass": 123193.0, "gene_names": "XPO1B;CRM1B;T17B22.20;T17B22_20;XPO1B;exportin 1B", "protein_name": "Protein EXPORTIN 1B", "disease": [], "biological_process": [ { "name": "ribosomal large subunit export from nucleus", "id": "GO:0000055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000055", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "protein export from nucleus", "id": "GO:0006611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006611", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "mRNA transport", "id": "GO:0051028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051028", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "ribosomal small subunit export from nucleus", "id": "GO:0000056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000056", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "embryo sac development", "id": "GO:0009553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009553", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "pollen germination", "id": "GO:0009846", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009846", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" } ], "molecular_function": [ { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" }, { "name": "nuclear export signal receptor activity", "id": "GO:0005049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005049", "evidence": [ { "database": "UniProtKB", "id": "F4IZR5", "url": "https://www.uniprot.org/uniprotkb/F4IZR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J061-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 422, "chemical_mass": 46899.0, "gene_names": "IQD5;IQ-domain 5;IQD5;MKA23.10", "protein_name": "Protein IQ-DOMAIN 5", "disease": [], "cellular_component": [ { "name": "cortical microtubule", "id": "GO:0055028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055028", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "spindle microtubule", "id": "GO:0005876", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005876", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "preprophase band", "id": "GO:0009574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009574", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" } ], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "regulation of microtubule cytoskeleton organization", "id": "GO:0070507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070507", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "microtubule-based process", "id": "GO:0007017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007017", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "anisotropic cell growth", "id": "GO:0051211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051211", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "leaf pavement cell development", "id": "GO:0090436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090436", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "regulation of cellulose biosynthetic process", "id": "GO:2001006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001006", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" }, { "name": "protein localization to cortical microtubule cytoskeleton", "id": "GO:0072699", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072699", "evidence": [ { "database": "UniProtKB", "id": "F4J061", "url": "https://www.uniprot.org/uniprotkb/F4J061" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J061-1", "start_pos": "227", "end_pos": "227", "site_lbl": "Ser227", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "230", "end_pos": "230", "site_lbl": "Ser230", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "260", "end_pos": "260", "site_lbl": "Ser260", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "372", "end_pos": "372", "site_lbl": "Ser372", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "379", "end_pos": "379", "site_lbl": "Ser379", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "384", "end_pos": "384", "site_lbl": "Ser384", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J061-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J061", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J061" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J077-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 782, "chemical_mass": 85646.0, "gene_names": "PAT1H1;RSD2", "protein_name": "Protein PAT1 homolog 1", "disease": [], "biological_process": [ { "name": "deadenylation-dependent decapping of nuclear-transcribed mRNA", "id": "GO:0000290", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000290", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "stem cell population maintenance", "id": "GO:0019827", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019827", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "P-body assembly", "id": "GO:0033962", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033962", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" }, { "name": "P-body", "id": "GO:0000932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000932", "evidence": [ { "database": "UniProtKB", "id": "F4J077", "url": "https://www.uniprot.org/uniprotkb/F4J077" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J077-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Ser147", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 147, "start_aa": "Ser", "end_pos": 147, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser147", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J077", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J077" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "192", "end_pos": "192", "site_lbl": "Ser192", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Ser196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Ser210", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "354", "end_pos": "354", "site_lbl": "Ser354", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "358", "end_pos": "358", "site_lbl": "Ser358", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "361", "end_pos": "361", "site_lbl": "Ser361", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "432", "end_pos": "432", "site_lbl": "Ser432", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Ser433", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "544", "end_pos": "544", "site_lbl": "Ser544", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "6", "end_pos": "6", "site_lbl": "Ser6", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J077-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Ser76", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J077", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J077" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J0D2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 476, "chemical_mass": 52878.0, "gene_names": "PBL36", "protein_name": "Serine/threonine-protein kinase PBL36", "disease": [], "biological_process": [ { "name": "pattern recognition receptor signaling pathway", "id": "GO:0002221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002221", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "cellular response to peptide", "id": "GO:1901653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901653", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "lipopolysaccharide-mediated signaling pathway", "id": "GO:0031663", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031663", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "meristem maintenance", "id": "GO:0010073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010073", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "phloem development", "id": "GO:0010088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010088", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "maintenance of shoot apical meristem identity", "id": "GO:0010492", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010492", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Ser102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "130", "end_pos": "130", "site_lbl": "Ser130", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "209", "end_pos": "209", "site_lbl": "Tyr209", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "263", "end_pos": "263", "site_lbl": "Ser263", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Ser293", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "294", "end_pos": "294", "site_lbl": "Thr294", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "299", "end_pos": "299", "site_lbl": "Thr299", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "307", "end_pos": "307", "site_lbl": "Tyr307", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4J0D2", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Ser450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "452", "end_pos": "452", "site_lbl": "Ser452", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "460", "end_pos": "460", "site_lbl": "Ser460", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "94", "end_pos": "94", "site_lbl": "Ser94", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J0D2-1", "start_pos": "96", "end_pos": "96", "site_lbl": "Ser96", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0D2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0D2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J0W4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 643, "chemical_mass": 71408.0, "gene_names": "MIRO2;ATCBG;CALCIUM BINDING GTP-ASE;MIRO-related GTP-ase 2;MIRO2;T20O10.250", "protein_name": "Mitochondrial Rho GTPase 2", "disease": [], "molecular_function": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" }, { "name": "mitochondrial outer membrane", "id": "GO:0005741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005741", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" } ], "biological_process": [ { "name": "mitochondrion organization", "id": "GO:0007005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007005", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4J0W4", "url": "https://www.uniprot.org/uniprotkb/F4J0W4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J0W4-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Ser134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0W4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0W4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J0W4-1", "start_pos": "439", "end_pos": "439", "site_lbl": "Ser439", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J0W4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J0W4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J220-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J220", "url": "https://www.uniprot.org/uniprotkb/F4J220" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 279, "chemical_mass": 30595.0, "gene_names": "LPPE1;F18B3.200", "protein_name": "Lipid phosphate phosphatase epsilon 1, chloroplastic", "disease": [], "biological_process": [ { "name": "diacylglycerol biosynthetic process", "id": "GO:0006651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006651", "evidence": [ { "database": "UniProtKB", "id": "F4J220", "url": "https://www.uniprot.org/uniprotkb/F4J220" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphatidate phosphatase activity", "id": "GO:0008195", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008195", "evidence": [ { "database": "UniProtKB", "id": "F4J220", "url": "https://www.uniprot.org/uniprotkb/F4J220" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J220", "url": "https://www.uniprot.org/uniprotkb/F4J220" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "F4J220", "url": "https://www.uniprot.org/uniprotkb/F4J220" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J220-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Ser115", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J220", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J220" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J264-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 406, "chemical_mass": 45969.0, "gene_names": "PRFB3;F28O9.40;PrfB3;peptide chain release factor 3", "protein_name": "Peptide chain release factor PrfB3, chloroplastic", "disease": [], "biological_process": [ { "name": "regulation of mRNA stability", "id": "GO:0043488", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043488", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" } ], "molecular_function": [ { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" }, { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" }, { "name": "translation release factor activity", "id": "GO:0003747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003747", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4J264", "url": "https://www.uniprot.org/uniprotkb/F4J264" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J2K2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 625, "chemical_mass": 68921.0, "gene_names": "FPGS2;A. THALIANA DHFS-FPGS HOMOLOG C;ATDFC;DFC;DHFS-FPGS homolog C;FPGS2;FPGS3;FPGSC;T22K18.1;folylpolyglutamate synthetase 2", "protein_name": "Folylpolyglutamate synthase", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "tetrahydrofolylpolyglutamate synthase activity", "id": "GO:0004326", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004326", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" } ], "biological_process": [ { "name": "one-carbon metabolic process", "id": "GO:0006730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006730", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "tetrahydrofolylpolyglutamate biosynthetic process", "id": "GO:0046901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046901", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "photorespiration", "id": "GO:0009853", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009853", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" }, { "name": "seedling development", "id": "GO:0090351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090351", "evidence": [ { "database": "UniProtKB", "id": "F4J2K2", "url": "https://www.uniprot.org/uniprotkb/F4J2K2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J2K2-1", "start_pos": "502", "end_pos": "502", "site_lbl": "Ser502", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2K2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2K2" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J2U9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 881, "chemical_mass": 100170.0, "gene_names": "CFM3A;ATCFM3A;CFM3A;CRM family member 3A;MXC7.10", "protein_name": "CRM-domain containing factor CFM3A, chloroplastic/mitochondrial", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" }, { "name": "Group II intron splicing", "id": "GO:0000373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000373", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "F4J2U9", "url": "https://www.uniprot.org/uniprotkb/F4J2U9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J2U9-1", "start_pos": "491", "end_pos": "491", "site_lbl": "Thr491", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2U9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2U9" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4J2U9-1", "start_pos": "497", "end_pos": "497", "site_lbl": "Ser497", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J2U9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J2U9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J3N2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1320, "chemical_mass": 152258.0, "gene_names": "FTSHI5;EMB2458;T6K12.4;T6K12_4;emb2458;embryo defective 2458", "protein_name": "Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic", "disease": [], "molecular_function": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "ATP-dependent peptidase activity", "id": "GO:0004176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004176", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast protein-transporting ATPase activity", "id": "GO:0016464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016464", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast inner membrane", "id": "GO:0009706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009706", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "Ycf2/FtsHi complex", "id": "GO:0062091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062091", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "cell redox homeostasis", "id": "GO:0045454", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045454", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "protein import into chloroplast stroma", "id": "GO:0045037", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045037", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" }, { "name": "regulation of photorespiration", "id": "GO:0080093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080093", "evidence": [ { "database": "UniProtKB", "id": "F4J3N2", "url": "https://www.uniprot.org/uniprotkb/F4J3N2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J3R7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 684, "chemical_mass": 75061.0, "gene_names": "SPD1;F13M14.30;SEEDLING PLASTID DEVELOPMENT 1;SPD1", "protein_name": "Protein SEEDLING PLASTID DEVELOPMENT 1", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" }, { "name": "chloroplast membrane", "id": "GO:0031969", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031969", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" }, { "name": "chloroplast intermembrane space", "id": "GO:0031972", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031972", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" } ], "biological_process": [ { "name": "plastid organization", "id": "GO:0009657", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009657", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" }, { "name": "seed maturation", "id": "GO:0010431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010431", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" }, { "name": "reversible differentiation", "id": "GO:0090677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090677", "evidence": [ { "database": "UniProtKB", "id": "F4J3R7", "url": "https://www.uniprot.org/uniprotkb/F4J3R7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "443", "end_pos": "443", "site_lbl": "Ser443", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Ser447", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "661", "end_pos": "661", "site_lbl": "Ser661", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "662", "end_pos": "662", "site_lbl": "Ser662", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "663", "end_pos": "663", "site_lbl": "Ser663", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "667", "end_pos": "667", "site_lbl": "Ser667", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "671", "end_pos": "671", "site_lbl": "Ser671", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "674", "end_pos": "674", "site_lbl": "Thr674", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "675", "end_pos": "675", "site_lbl": "Thr675", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "677", "end_pos": "677", "site_lbl": "Thr677", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" } ] } ] }, { "uniprot_canonical_ac": "F4J3R7-1", "start_pos": "75", "end_pos": "75", "site_lbl": "Ser75", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3R7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3R7" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J3T8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 840, "chemical_mass": 93378.0, "gene_names": "MTM1;Arabidopsis thaliana myotubularin 1;AtMTM1;F13M14.17;F18K10.13;MTM1;myotubularin 1", "protein_name": "Phosphatidylinositol-3-phosphatase myotubularin-1", "disease": [], "molecular_function": [ { "name": "phosphatidylinositol-3,5-bisphosphate phosphatase activity", "id": "GO:0106018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106018", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "phosphoprotein phosphatase activity", "id": "GO:0004721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004721", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "phosphatidylinositol-3-phosphate phosphatase activity", "id": "GO:0004438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004438", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity", "id": "GO:0052629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052629", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "cellular response to water deprivation", "id": "GO:0042631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042631", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "phosphatidylinositol dephosphorylation", "id": "GO:0046856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046856", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" }, { "name": "regulation of response to water deprivation", "id": "GO:2000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000070", "evidence": [ { "database": "UniProtKB", "id": "F4J3T8", "url": "https://www.uniprot.org/uniprotkb/F4J3T8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J3T8-1", "start_pos": "19", "end_pos": "19", "site_lbl": "Ser19", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3T8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3T8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J3T8-1", "start_pos": "515", "end_pos": "515", "site_lbl": "Ser515", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3T8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3T8" } ] } ] }, { "uniprot_canonical_ac": "F4J3T8-1", "start_pos": "516", "end_pos": "516", "site_lbl": "Ser516", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J3T8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J3T8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J8G7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2138, "chemical_mass": 234225.0, "gene_names": "VIR;EMB2016;F18C1.5;F18C1_5;embryo defective 2016", "protein_name": "Protein virilizer homolog", "disease": [], "cellular_component": [ { "name": "RNA N6-methyladenosine methyltransferase complex", "id": "GO:0036396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036396", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "RNA methylation", "id": "GO:0001510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001510", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" }, { "name": "photoprotection", "id": "GO:0010117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010117", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" } ], "molecular_function": [ { "name": "mRNA methyltransferase activity", "id": "GO:0008174", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008174", "evidence": [ { "database": "UniProtKB", "id": "F4J8G7", "url": "https://www.uniprot.org/uniprotkb/F4J8G7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1566", "end_pos": "1566", "site_lbl": "Thr1566", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1566, "start_aa": "Thr", "end_pos": 1566, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1566", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1567", "end_pos": "1567", "site_lbl": "Ser1567", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1567, "start_aa": "Ser", "end_pos": 1567, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1567", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1571", "end_pos": "1571", "site_lbl": "Ser1571", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1571, "start_aa": "Ser", "end_pos": 1571, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1571", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1600", "end_pos": "1600", "site_lbl": "Ser1600", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1600, "start_aa": "Ser", "end_pos": 1600, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1600", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ], "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8G7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8G7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1601", "end_pos": "1601", "site_lbl": "Ser1601", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1601, "start_aa": "Ser", "end_pos": 1601, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1601", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1745", "end_pos": "1745", "site_lbl": "Ser1745", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1745, "start_aa": "Ser", "end_pos": 1745, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1745", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1747", "end_pos": "1747", "site_lbl": "Ser1747", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1747, "start_aa": "Ser", "end_pos": 1747, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1747", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1752", "end_pos": "1752", "site_lbl": "Ser1752", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1752, "start_aa": "Ser", "end_pos": 1752, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1752", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4J8G7", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4J8G7" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1583", "end_pos": "1583", "site_lbl": "Ser1583", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8G7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8G7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J8G7-1", "start_pos": "1758", "end_pos": "1758", "site_lbl": "Ser1758", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J8G7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J8G7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4J9M5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1102, "chemical_mass": 126735.0, "gene_names": "CHR12;ATCHR12;CHR12;F2O10.3;F2O10_3;MINU1;chromatin remodeling 12", "protein_name": "Probable ATP-dependent DNA helicase CHR12", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "DNA helicase activity", "id": "GO:0003678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003678", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "nucleosome array spacer activity", "id": "GO:0140750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140750", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "maintenance of seed dormancy", "id": "GO:0010231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010231", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" }, { "name": "maintenance of shoot apical meristem identity", "id": "GO:0010492", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010492", "evidence": [ { "database": "UniProtKB", "id": "F4J9M5", "url": "https://www.uniprot.org/uniprotkb/F4J9M5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4J9M5-1", "start_pos": "1053", "end_pos": "1053", "site_lbl": "Ser1053", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J9M5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J9M5" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4J9M5-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Ser337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J9M5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J9M5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4J9M5-1", "start_pos": "340", "end_pos": "340", "site_lbl": "Ser340", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J9M5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J9M5" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4J9M5-1", "start_pos": "988", "end_pos": "988", "site_lbl": "Ser988", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J9M5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J9M5" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4J9M5-1", "start_pos": "993", "end_pos": "993", "site_lbl": "Ser993", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4J9M5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4J9M5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JAU3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 299, "chemical_mass": 33019.0, "gene_names": "P4H2;AT-P4H-2;F24P17.24;F24P17_24;P4H isoform 2;P4H2;PROLYL 4-HYDROXYLASE;prolyl 4-hydroxylase 2", "protein_name": "Prolyl 4-hydroxylase 2", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "trans-Golgi network", "id": "GO:0005802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005802", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "Golgi cis cisterna", "id": "GO:0000137", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000137", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" } ], "molecular_function": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "L-ascorbic acid binding", "id": "GO:0031418", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031418", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "procollagen-proline 4-dioxygenase activity", "id": "GO:0004656", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004656", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" } ], "biological_process": [ { "name": "peptidyl-proline hydroxylation to 4-hydroxy-L-proline", "id": "GO:0018401", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0018401", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" }, { "name": "root hair cell development", "id": "GO:0080147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080147", "evidence": [ { "database": "UniProtKB", "id": "F4JAU3", "url": "https://www.uniprot.org/uniprotkb/F4JAU3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JAU3-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Asn165", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 165, "start_aa": "Asn", "end_pos": 165, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn165", "evidence": [ { "id": "F4JAU3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JAU3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JAU3-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Asn258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 258, "start_aa": "Asn", "end_pos": 258, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn258", "evidence": [ { "id": "F4JAU3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JAU3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JAU3-1", "start_pos": "263", "end_pos": "263", "site_lbl": "Asn263", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 263, "start_aa": "Asn", "end_pos": 263, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn263", "evidence": [ { "id": "F4JAU3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JAU3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JBX1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 143, "chemical_mass": 16484.0, "gene_names": "RGF10;CLELn;T4C21.60", "protein_name": "Root meristem growth factor 10", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" } ], "biological_process": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" } ], "molecular_function": [ { "name": "growth factor activity", "id": "GO:0008083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008083", "evidence": [ { "database": "UniProtKB", "id": "F4JBX1", "url": "https://www.uniprot.org/uniprotkb/F4JBX1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JBX1-1", "start_pos": "60", "end_pos": "60", "site_lbl": "Asn60", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 60, "start_aa": "Asn", "end_pos": 60, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn60", "evidence": [ { "id": "F4JBX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JBX1#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JCB2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 601, "chemical_mass": 69150.0, "gene_names": "CPL5;MMB12.6;MMB12.7", "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 5", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" }, { "name": "response to salt", "id": "GO:1902074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902074", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" } ], "molecular_function": [ { "name": "RNA polymerase II CTD heptapeptide repeat phosphatase activity", "id": "GO:0008420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008420", "evidence": [ { "database": "UniProtKB", "id": "F4JCB2", "url": "https://www.uniprot.org/uniprotkb/F4JCB2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JCN9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 92, "chemical_mass": 10360.0, "gene_names": "PRE4;BANQUO 3;BASIC HELIX-LOOP-HELIX PROTEIN 161;BHLH161;BNQ3;T23J7.40", "protein_name": "Transcription factor PRE4", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" }, { "name": "regulation of growth", "id": "GO:0040008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040008", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" }, { "name": "gibberellic acid mediated signaling pathway", "id": "GO:0009740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009740", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "F4JCN9", "url": "https://www.uniprot.org/uniprotkb/F4JCN9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JEI8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 317, "chemical_mass": 36418.0, "gene_names": "4;NAP1;4;MMM17.22;NAP1;NFA04;NFA4;NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 04;NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 4;nucleosome assembly protein1", "protein_name": "4;Nucleosome assembly protein 1", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" } ], "biological_process": [ { "name": "nucleosome assembly", "id": "GO:0006334", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006334", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" }, { "name": "double-strand break repair via homologous recombination", "id": "GO:0000724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000724", "evidence": [ { "database": "UniProtKB", "id": "F4JEI8", "url": "https://www.uniprot.org/uniprotkb/F4JEI8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JF14-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 953, "chemical_mass": 104853.0, "gene_names": "EOL1;T12K4_110", "protein_name": "Protein ENHANCER OF LHP1 1", "disease": [], "cellular_component": [ { "name": "nuclear replication fork", "id": "GO:0043596", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043596", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" } ], "biological_process": [ { "name": "mitotic cell cycle", "id": "GO:0000278", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000278", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" }, { "name": "DNA-templated DNA replication", "id": "GO:0006261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006261", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" } ], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4JF14", "url": "https://www.uniprot.org/uniprotkb/F4JF14" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JF14-1", "start_pos": "318", "end_pos": "318", "site_lbl": "Thr318", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 318, "start_aa": "Thr", "end_pos": 318, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr318", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JF14-1", "start_pos": "438", "end_pos": "438", "site_lbl": "Thr438", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 438, "start_aa": "Thr", "end_pos": 438, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr438", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JF14-1", "start_pos": "349", "end_pos": "349", "site_lbl": "Ser349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JF14", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JF14" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4JF14-1", "start_pos": "357", "end_pos": "357", "site_lbl": "Ser357", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JF14", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JF14" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JF14-1", "start_pos": "362", "end_pos": "362", "site_lbl": "Ser362", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JF14", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JF14" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JFU8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 518, "chemical_mass": 59607.0, "gene_names": "OBL1", "protein_name": "Triacylglycerol lipase OBL1", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" }, { "name": "pollen tube", "id": "GO:0090406", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090406", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" } ], "biological_process": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" } ], "molecular_function": [ { "name": "monoacylglycerol lipase activity", "id": "GO:0047372", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047372", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" }, { "name": "triacylglycerol lipase activity", "id": "GO:0004806", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004806", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" }, { "name": "diacylglycerol lipase activity", "id": "GO:0120516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120516", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JFU8-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Thr465", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JFU8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JFU8" } ] } ] }, { "uniprot_canonical_ac": "F4JFU8-1", "start_pos": "468", "end_pos": "468", "site_lbl": "Tyr468", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JFU8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JFU8" } ] } ] }, { "uniprot_canonical_ac": "F4JFU8-1", "start_pos": "474", "end_pos": "474", "site_lbl": "Tyr474", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JFU8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JFU8" } ] } ] }, { "uniprot_canonical_ac": "F4JFU8-1", "start_pos": "339", "end_pos": "339", "site_lbl": "Ser339", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of catalytic activity; reduces pollen tube growth.", "evidence": [ { "database": "UniProtKB", "id": "F4JFU8", "url": "https://www.uniprot.org/uniprotkb/F4JFU8" }, { "database": "PubMed", "id": "29178188", "url": "https://glygen.org/publication/PubMed/29178188" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JGR5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 569, "chemical_mass": 62742.0, "gene_names": "PFP-BETA2;MEE51;T24H24.15;T24H24_15;maternal effect embryo arrest 51", "protein_name": "Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "6-phosphofructokinase activity", "id": "GO:0003872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003872", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "diphosphate-fructose-6-phosphate 1-phosphotransferase activity", "id": "GO:0047334", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047334", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" } ], "biological_process": [ { "name": "response to glucose", "id": "GO:0009749", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009749", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "fructose 6-phosphate metabolic process", "id": "GO:0006002", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006002", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" }, { "name": "photosynthesis", "id": "GO:0015979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015979", "evidence": [ { "database": "UniProtKB", "id": "F4JGR5", "url": "https://www.uniprot.org/uniprotkb/F4JGR5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JGR5-1", "start_pos": "541", "end_pos": "541", "site_lbl": "Tyr541", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JGR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JGR5" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JHH5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 787, "chemical_mass": 88371.0, "gene_names": "SEC15B;SEC15B;T14P8.16;T14P8_16;exocyst complex component sec15B", "protein_name": "Exocyst complex component SEC15B", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "extracellular exosome", "id": "GO:0070062", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070062", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "exocyst", "id": "GO:0000145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000145", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "exocytosis", "id": "GO:0006887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006887", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "Golgi to plasma membrane transport", "id": "GO:0006893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006893", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "vesicle tethering involved in exocytosis", "id": "GO:0090522", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090522", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "pollen germination", "id": "GO:0009846", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009846", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" }, { "name": "acceptance of pollen", "id": "GO:0060321", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060321", "evidence": [ { "database": "UniProtKB", "id": "F4JHH5", "url": "https://www.uniprot.org/uniprotkb/F4JHH5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JHH5-1", "start_pos": "502", "end_pos": "502", "site_lbl": "Tyr502", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JHH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JHH5" } ] } ] }, { "uniprot_canonical_ac": "F4JHH5-1", "start_pos": "735", "end_pos": "735", "site_lbl": "Ser735", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JHH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JHH5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JHH5-1", "start_pos": "761", "end_pos": "761", "site_lbl": "Thr761", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JHH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JHH5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JHH5-1", "start_pos": "775", "end_pos": "775", "site_lbl": "Ser775", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JHH5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JHH5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JI72-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JI72", "url": "https://www.uniprot.org/uniprotkb/F4JI72" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 507, "chemical_mass": 56824.0, "gene_names": "F4C21.18;F4C21_18", "protein_name": "", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JI72", "url": "https://www.uniprot.org/uniprotkb/F4JI72" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JI72", "url": "https://www.uniprot.org/uniprotkb/F4JI72" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JI72", "url": "https://www.uniprot.org/uniprotkb/F4JI72" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "317", "end_pos": "317", "site_lbl": "Ser317", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "339", "end_pos": "339", "site_lbl": "Ser339", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "3", "end_pos": "3", "site_lbl": "Ser3", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "417", "end_pos": "417", "site_lbl": "Ser417", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Ser471", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Ser5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JI72-1", "start_pos": "87", "end_pos": "87", "site_lbl": "Ser87", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JI72", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JI72" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JJL3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 296, "chemical_mass": 33610.0, "gene_names": "ENDO5;ENDO5;F17L22.60;F18E5.220;endonuclease 5", "protein_name": "Endonuclease 5", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" }, { "name": "RNA endonuclease activity", "id": "GO:0004521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004521", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" }, { "name": "single-stranded DNA endodeoxyribonuclease activity", "id": "GO:0000014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000014", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" }, { "name": "T/G mismatch-specific endonuclease activity", "id": "GO:0043765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043765", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA catabolic process", "id": "GO:0006308", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006308", "evidence": [ { "database": "UniProtKB", "id": "F4JJL3", "url": "https://www.uniprot.org/uniprotkb/F4JJL3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JJL3-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Asn115", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 115, "start_aa": "Asn", "end_pos": 115, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn115", "evidence": [ { "id": "F4JJL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL3-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Asn134", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 134, "start_aa": "Asn", "end_pos": 134, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn134", "evidence": [ { "id": "F4JJL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL3-1", "start_pos": "173", "end_pos": "173", "site_lbl": "Asn173", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 173, "start_aa": "Asn", "end_pos": 173, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn173", "evidence": [ { "id": "F4JJL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL3-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Asn195", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 195, "start_aa": "Asn", "end_pos": 195, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn195", "evidence": [ { "id": "F4JJL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JJL3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JJL3-1", "start_pos": "251", "end_pos": "251", "site_lbl": "Thr251", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 251, "start_aa": "Thr", "end_pos": 251, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr251", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JKB6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 576, "chemical_mass": 64396.0, "gene_names": "PRORP3;PRORP3;T8O5.110;T8O5_110;proteinaceous RNase P 3", "protein_name": "Proteinaceous RNase P 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" }, { "name": "tRNA 5'-leader removal", "id": "GO:0001682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001682", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" }, { "name": "sno(s)RNA processing", "id": "GO:0043144", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043144", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" }, { "name": "ribonuclease P activity", "id": "GO:0004526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004526", "evidence": [ { "database": "UniProtKB", "id": "F4JKB6", "url": "https://www.uniprot.org/uniprotkb/F4JKB6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JKB6-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Ser335", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKB6" } ] } ] }, { "uniprot_canonical_ac": "F4JKB6-1", "start_pos": "336", "end_pos": "336", "site_lbl": "Ser336", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKB6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKB6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JKH6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1819, "chemical_mass": 199116.0, "gene_names": "REC2;T13J8.190;T13J8_190;TSS", "protein_name": "Protein REDUCED CHLOROPLAST COVERAGE 2", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" } ], "biological_process": [ { "name": "chloroplast localization", "id": "GO:0019750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019750", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1126", "end_pos": "1126", "site_lbl": "Thr1126", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1132", "end_pos": "1132", "site_lbl": "Ser1132", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1134", "end_pos": "1134", "site_lbl": "Ser1134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1190", "end_pos": "1190", "site_lbl": "Ser1190", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1195", "end_pos": "1195", "site_lbl": "Thr1195", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1198", "end_pos": "1198", "site_lbl": "Ser1198", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1199", "end_pos": "1199", "site_lbl": "Ser1199", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1200", "end_pos": "1200", "site_lbl": "Ser1200", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1206", "end_pos": "1206", "site_lbl": "Ser1206", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1244", "end_pos": "1244", "site_lbl": "Ser1244", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "20733066", "url": "https://glygen.org/publication/PubMed/20733066" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1288", "end_pos": "1288", "site_lbl": "Ser1288", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1289", "end_pos": "1289", "site_lbl": "Thr1289", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1292", "end_pos": "1292", "site_lbl": "Thr1292", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1293", "end_pos": "1293", "site_lbl": "Ser1293", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1298", "end_pos": "1298", "site_lbl": "Ser1298", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1311", "end_pos": "1311", "site_lbl": "Ser1311", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1320", "end_pos": "1320", "site_lbl": "Ser1320", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "F4JKH6", "url": "https://www.uniprot.org/uniprotkb/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1330", "end_pos": "1330", "site_lbl": "Ser1330", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1341", "end_pos": "1341", "site_lbl": "Ser1341", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1345", "end_pos": "1345", "site_lbl": "Ser1345", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1346", "end_pos": "1346", "site_lbl": "Ser1346", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1349", "end_pos": "1349", "site_lbl": "Thr1349", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1356", "end_pos": "1356", "site_lbl": "Thr1356", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1360", "end_pos": "1360", "site_lbl": "Ser1360", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1363", "end_pos": "1363", "site_lbl": "Ser1363", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1448", "end_pos": "1448", "site_lbl": "Ser1448", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Ser144", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1451", "end_pos": "1451", "site_lbl": "Thr1451", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1452", "end_pos": "1452", "site_lbl": "Ser1452", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1453", "end_pos": "1453", "site_lbl": "Ser1453", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Ser146", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1474", "end_pos": "1474", "site_lbl": "Thr1474", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "147", "end_pos": "147", "site_lbl": "Thr147", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1484", "end_pos": "1484", "site_lbl": "Ser1484", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1486", "end_pos": "1486", "site_lbl": "Ser1486", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1501", "end_pos": "1501", "site_lbl": "Ser1501", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1503", "end_pos": "1503", "site_lbl": "Thr1503", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Ser151", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1529", "end_pos": "1529", "site_lbl": "Thr1529", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1534", "end_pos": "1534", "site_lbl": "Thr1534", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "153", "end_pos": "153", "site_lbl": "Thr153", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1542", "end_pos": "1542", "site_lbl": "Ser1542", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1543", "end_pos": "1543", "site_lbl": "Ser1543", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1546", "end_pos": "1546", "site_lbl": "Ser1546", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1547", "end_pos": "1547", "site_lbl": "Ser1547", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "160", "end_pos": "160", "site_lbl": "Ser160", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "162", "end_pos": "162", "site_lbl": "Ser162", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1633", "end_pos": "1633", "site_lbl": "Ser1633", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "165", "end_pos": "165", "site_lbl": "Ser165", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1748", "end_pos": "1748", "site_lbl": "Ser1748", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "175", "end_pos": "175", "site_lbl": "Ser175", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1807", "end_pos": "1807", "site_lbl": "Tyr1807", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "1808", "end_pos": "1808", "site_lbl": "Ser1808", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "249", "end_pos": "249", "site_lbl": "Thr249", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "533", "end_pos": "533", "site_lbl": "Ser533", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "534", "end_pos": "534", "site_lbl": "Ser534", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "535", "end_pos": "535", "site_lbl": "Thr535", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "537", "end_pos": "537", "site_lbl": "Ser537", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "538", "end_pos": "538", "site_lbl": "Ser538", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "543", "end_pos": "543", "site_lbl": "Ser543", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "548", "end_pos": "548", "site_lbl": "Ser548", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "649", "end_pos": "649", "site_lbl": "Thr649", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "652", "end_pos": "652", "site_lbl": "Thr652", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "653", "end_pos": "653", "site_lbl": "Ser653", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JKH6-1", "start_pos": "655", "end_pos": "655", "site_lbl": "Thr655", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JKH6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JKH6" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JKK0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1108, "chemical_mass": 123004.0, "gene_names": "SUD1;CER9;ECERIFERUM 9;F28A23.140;F28A23_140;SUD1;SUPPRESSOR OF DRY2 DEFECTS 1", "protein_name": "Probable E3 ubiquitin ligase SUD1", "disease": [], "biological_process": [ { "name": "cuticle development", "id": "GO:0042335", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042335", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "wax biosynthetic process", "id": "GO:0010025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010025", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "isoprenoid biosynthetic process", "id": "GO:0008299", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008299", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "cutin biosynthetic process", "id": "GO:0010143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010143", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "suberin biosynthetic process", "id": "GO:0010345", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010345", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway", "id": "GO:1900486", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900486", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JKK0-1", "start_pos": "114", "end_pos": "114", "site_lbl": "Cys114", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "In cer9-1; Semiglossy shoots.", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" }, { "database": "PubMed", "id": "22635115", "url": "https://glygen.org/publication/PubMed/22635115" } ] } ] }, { "uniprot_canonical_ac": "F4JKK0-1", "start_pos": "218", "end_pos": "218", "site_lbl": "Gly218", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "R", "comment": "In sud1-1; No visible phenotype except glossy shoots, but is able to suppress the dry2 phenotype.", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" }, { "database": "PubMed", "id": "23404890", "url": "https://glygen.org/publication/PubMed/23404890" } ] } ] }, { "uniprot_canonical_ac": "F4JKK0-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Arg244", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "K", "comment": "In sud1-3; Able to suppress the dry2 phenotype.", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" }, { "database": "PubMed", "id": "23404890", "url": "https://glygen.org/publication/PubMed/23404890" } ] } ] }, { "uniprot_canonical_ac": "F4JKK0-1", "start_pos": "360", "end_pos": "360", "site_lbl": "Gly360", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In sud1-2; Able to suppress the dry2 phenotype.", "evidence": [ { "database": "UniProtKB", "id": "F4JKK0", "url": "https://www.uniprot.org/uniprotkb/F4JKK0" }, { "database": "PubMed", "id": "23404890", "url": "https://glygen.org/publication/PubMed/23404890" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JL11-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 535, "chemical_mass": 58907.0, "gene_names": "IMPA2", "protein_name": "Importin subunit alpha-2", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "NLS-dependent protein nuclear import complex", "id": "GO:0042564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042564", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" } ], "biological_process": [ { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "NLS-bearing protein import into nucleus", "id": "GO:0006607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006607", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "cell wall organization", "id": "GO:0071555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071555", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" } ], "molecular_function": [ { "name": "nuclear localization sequence binding", "id": "GO:0008139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008139", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" }, { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "F4JL11", "url": "https://www.uniprot.org/uniprotkb/F4JL11" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JL11-1", "start_pos": "194", "end_pos": "194", "site_lbl": "Ser194", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL11", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL11" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JL11-1", "start_pos": "485", "end_pos": "485", "site_lbl": "Ser485", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL11", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL11" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JL28-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 234, "chemical_mass": 26566.0, "gene_names": "EBS;EARLY BOLTING IN SHORT DAYS;EBS;F1N20.240;F1N20_240", "protein_name": "Chromatin remodeling protein EBS", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "molecular function inhibitor activity", "id": "GO:0140678", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140678", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "histone H3K4me3 reader activity", "id": "GO:0140002", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140002", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "post-embryonic development", "id": "GO:0009791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009791", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "regulation of photoperiodism, flowering", "id": "GO:2000028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000028", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" }, { "name": "negative regulation of long-day photoperiodism, flowering", "id": "GO:0048579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048579", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Ser195", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL28", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL28" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Ser196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL28", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL28" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Ser203", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL28", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL28" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Ser210", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JL28", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JL28" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "170", "end_pos": "170", "site_lbl": "Trp170", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Impaired H3K4me2/3 binding.", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" }, { "database": "PubMed", "id": "25281686", "url": "https://glygen.org/publication/PubMed/25281686" } ] } ] }, { "uniprot_canonical_ac": "F4JL28-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Pro41", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In ebs-1; early flowering, especially under short-day photoperiods, reduction in seed dormancy, plant size, and fertility, and partial suppression of LEAFY disruption (e.g. lfy-6) effects.", "evidence": [ { "database": "UniProtKB", "id": "F4JL28", "url": "https://www.uniprot.org/uniprotkb/F4JL28" }, { "database": "PubMed", "id": "12837946", "url": "https://glygen.org/publication/PubMed/12837946" }, { "database": "PubMed", "id": "11340178", "url": "https://glygen.org/publication/PubMed/11340178" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JLC1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 331, "chemical_mass": 38241.0, "gene_names": "MRL7;AtECB1;ECB1;MRL7;Mesophyll-cell RNAi Library line 7;RCB;SUPPRESSOR OF VARIEGATION 4;SVR4;T5F17.40;T5F17_40;early chloroplast biogenesis 1", "protein_name": "Thioredoxin-like fold domain-containing protein MRL7, chloroplastic", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" }, { "name": "chloroplast nucleoid", "id": "GO:0042644", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042644", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" }, { "name": "response to temperature stimulus", "id": "GO:0009266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009266", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JLC1-1", "start_pos": "275", "end_pos": "275", "site_lbl": "Ala275", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "V", "comment": "In rcb-101; restoration of thermoresponsive PIF4 accumulation in hmr-22 background, and suppression of hmr-22 mutant defects in chloroplast biogenesis and photomorphogenesis.", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" }, { "database": "PubMed", "id": "33824329", "url": "https://glygen.org/publication/PubMed/33824329" } ] } ] }, { "uniprot_canonical_ac": "F4JLC1-1", "start_pos": "291", "end_pos": "291", "site_lbl": "Arg291", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "W", "comment": "In svr4-1; retarded growth, pale green leaves and enhanced non-photochemical quenching (NPQ).", "evidence": [ { "database": "UniProtKB", "id": "F4JLC1", "url": "https://www.uniprot.org/uniprotkb/F4JLC1" }, { "database": "PubMed", "id": "21220584", "url": "https://glygen.org/publication/PubMed/21220584" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JLE5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 554, "chemical_mass": 63287.0, "gene_names": "SFH1;AtSFH1;CAN OF WORMS1;COW1;PITP1;SHORT ROOT HAIR 1;SRH1;T4L20.160;T4L20_160", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH1", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "root hair tip", "id": "GO:0035619", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035619", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "post-Golgi vesicle-mediated transport", "id": "GO:0006892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006892", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "cell tip growth", "id": "GO:0009932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009932", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "root epidermal cell differentiation", "id": "GO:0010053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010053", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "root hair elongation", "id": "GO:0048767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048767", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" }, { "name": "root hair cell tip growth", "id": "GO:0048768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048768", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphatidylinositol transfer activity", "id": "GO:0008526", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008526", "evidence": [ { "database": "UniProtKB", "id": "F4JLE5", "url": "https://www.uniprot.org/uniprotkb/F4JLE5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JLE5-1", "start_pos": "368", "end_pos": "368", "site_lbl": "Tyr368", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JLE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JLE5" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JLE5-1", "start_pos": "37", "end_pos": "37", "site_lbl": "Ser37", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JLE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JLE5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JLP5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 567, "chemical_mass": 60145.0, "gene_names": "LPD2;FCAALL.61", "protein_name": "Dihydrolipoyl dehydrogenase 2, chloroplastic", "disease": [], "biological_process": [ { "name": "response to arsenic-containing substance", "id": "GO:0046685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046685", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "2-oxoglutarate metabolic process", "id": "GO:0006103", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006103", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "oxoglutarate dehydrogenase complex", "id": "GO:0045252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045252", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" } ], "molecular_function": [ { "name": "flavin adenine dinucleotide binding", "id": "GO:0050660", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050660", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" }, { "name": "dihydrolipoyl dehydrogenase (NADH) activity", "id": "GO:0004148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004148", "evidence": [ { "database": "UniProtKB", "id": "F4JLP5", "url": "https://www.uniprot.org/uniprotkb/F4JLP5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JLP5-1", "start_pos": "423", "end_pos": "423", "site_lbl": "Thr423", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JLP5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JLP5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JLZ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 291, "chemical_mass": 34284.0, "gene_names": "SMO1-3;T12H17.140", "protein_name": "Methylsterol monooxygenase 1-3", "disease": [], "molecular_function": [ { "name": "C-4 methylsterol oxidase activity", "id": "GO:0000254", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000254", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" }, { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" }, { "name": "24-methylenelophenol methyl oxidase activity", "id": "GO:0102177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102177", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" } ], "biological_process": [ { "name": "sterol biosynthetic process", "id": "GO:0016126", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016126", "evidence": [ { "database": "UniProtKB", "id": "F4JLZ6", "url": "https://www.uniprot.org/uniprotkb/F4JLZ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JN35-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 512, "chemical_mass": 57250.0, "gene_names": "NTL9;CBNAC;F8D20.90;F8D20_90;NAC transcription factor-like 9;NTL9;calmodulin-binding NAC protein", "protein_name": "Protein NTM1-like 9", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "positive regulation of defense response to bacterium", "id": "GO:1900426", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900426", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "cellular response to osmotic stress", "id": "GO:0071470", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071470", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" }, { "name": "regulation of defense response", "id": "GO:0031347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031347", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Ser303", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JN35", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JN35" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "416", "end_pos": "416", "site_lbl": "Ser416", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JN35", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JN35" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Ser447", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JN35", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JN35" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "487", "end_pos": "487", "site_lbl": "Trp487", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "R", "comment": "Loss of binding to calmodulin.", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" }, { "database": "PubMed", "id": "17947243", "url": "https://glygen.org/publication/PubMed/17947243" } ] } ] }, { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "491", "end_pos": "491", "site_lbl": "Ala491", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "R", "comment": "No effect on binding to calmodulin.", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" }, { "database": "PubMed", "id": "17947243", "url": "https://glygen.org/publication/PubMed/17947243" } ] } ] }, { "uniprot_canonical_ac": "F4JN35-1", "start_pos": "496", "end_pos": "496", "site_lbl": "Ala496", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "R", "comment": "No effect on binding to calmodulin.", "evidence": [ { "database": "UniProtKB", "id": "F4JN35", "url": "https://www.uniprot.org/uniprotkb/F4JN35" }, { "database": "PubMed", "id": "17947243", "url": "https://glygen.org/publication/PubMed/17947243" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JNX3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 304, "chemical_mass": 34491.0, "gene_names": "CaMKMT;CaM KMT;T19K4.120;calmodulin N-methyltransferase", "protein_name": "Calmodulin-lysine N-methyltransferase", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to salt", "id": "GO:1902074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902074", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to oomycetes", "id": "GO:0002239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002239", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "gravitropism", "id": "GO:0009630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009630", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "regulation of abscisic acid-activated signaling pathway", "id": "GO:0009787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009787", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "regulation of auxin mediated signaling pathway", "id": "GO:0010928", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010928", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "root hair cell development", "id": "GO:0080147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080147", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "regulation of response to salt stress", "id": "GO:1901000", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901000", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "regulation of response to water deprivation", "id": "GO:2000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000070", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" } ], "molecular_function": [ { "name": "calmodulin-lysine N-methyltransferase activity", "id": "GO:0018025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0018025", "evidence": [ { "database": "UniProtKB", "id": "F4JNX3", "url": "https://www.uniprot.org/uniprotkb/F4JNX3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JP36-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 705, "chemical_mass": 80505.0, "gene_names": "HAP2;GCS1;GENERATIVE CELL-SPECIFIC 1;HAP2;HAPLESS 2;T5C23.150;T5C23_150;T5C23", "protein_name": "Protein HAPLESS 2", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" } ], "molecular_function": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" } ], "biological_process": [ { "name": "plasma membrane fusion", "id": "GO:0045026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045026", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "double fertilization forming a zygote and endosperm", "id": "GO:0009567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009567", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "pollen tube guidance", "id": "GO:0010183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010183", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "pollen sperm cell differentiation", "id": "GO:0048235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048235", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" }, { "name": "fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm", "id": "GO:0061936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061936", "evidence": [ { "database": "UniProtKB", "id": "F4JP36", "url": "https://www.uniprot.org/uniprotkb/F4JP36" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "226", "end_pos": "226", "site_lbl": "Asn226", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 226, "start_aa": "Asn", "end_pos": 226, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn226", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "5OW3", "database": "PDB", "url": "https://www.rcsb.org/sequence/5OW3" }, { "id": "30102690", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/30102690" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "5OW3", "database": "PDB", "url": "https://www.rcsb.org/structure/5OW3" }, { "id": "5OW3", "database": "PDB", "url": "https://www.rcsb.org/structure/5OW3" }, { "id": "5OW3|C|226", "database": "", "url": "" } ] } ] }, { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "276", "end_pos": "276", "site_lbl": "Asn276", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 276, "start_aa": "Asn", "end_pos": 276, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn276", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "46", "end_pos": "46", "site_lbl": "Asn46", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 46, "start_aa": "Asn", "end_pos": 46, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn46", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "498", "end_pos": "498", "site_lbl": "Asn498", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 498, "start_aa": "Asn", "end_pos": 498, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn498", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Asn78", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 78, "start_aa": "Asn", "end_pos": 78, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn78", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "F4JP36-1", "start_pos": "95", "end_pos": "95", "site_lbl": "Asn95", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 95, "start_aa": "Asn", "end_pos": 95, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn95", "evidence": [ { "id": "F4JP36", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JP36#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" }, { "id": "5OW3", "database": "PDB", "url": "https://www.rcsb.org/structure/5OW3" }, { "id": "5OW3", "database": "PDB", "url": "https://www.rcsb.org/structure/5OW3" }, { "id": "5OW3|C|95", "database": "", "url": "" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JRS4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 707, "chemical_mass": 79573.0, "gene_names": "MORC7;CRH3;F13M23.110;F13M23_110", "protein_name": "Protein MICRORCHIDIA 7", "disease": [], "biological_process": [ { "name": "defense response to other organism", "id": "GO:0098542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098542", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "regulation of DNA repair", "id": "GO:0006282", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006282", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "regulation of gene silencing by regulatory ncRNA", "id": "GO:0060966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060966", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "gene silencing by siRNA-directed DNA methylation", "id": "GO:0080188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080188", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "positive regulation of defense response to oomycetes", "id": "GO:1902290", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902290", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "endonuclease activity", "id": "GO:0004519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004519", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "F4JRS4", "url": "https://www.uniprot.org/uniprotkb/F4JRS4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JRS4-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Ser235", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JRS4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JRS4" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JSH1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 740, "chemical_mass": 81683.0, "gene_names": "APY7;APY7;AtAPY7;T18B16.150;T18B16_150;apyrase 7", "protein_name": "Probable apyrase 7", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" }, { "name": "nucleoside diphosphate phosphatase activity", "id": "GO:0017110", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017110", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" }, { "name": "apyrase activity", "id": "GO:0004050", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004050", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" } ], "biological_process": [ { "name": "nucleoside diphosphate catabolic process", "id": "GO:0009134", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009134", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" }, { "name": "anther dehiscence", "id": "GO:0009901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009901", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" }, { "name": "pollen exine formation", "id": "GO:0010584", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010584", "evidence": [ { "database": "UniProtKB", "id": "F4JSH1", "url": "https://www.uniprot.org/uniprotkb/F4JSH1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "137", "end_pos": "137", "site_lbl": "Asn137", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 137, "start_aa": "Asn", "end_pos": 137, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn137", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "208", "end_pos": "208", "site_lbl": "Asn208", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 208, "start_aa": "Asn", "end_pos": 208, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn208", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "330", "end_pos": "330", "site_lbl": "Asn330", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 330, "start_aa": "Asn", "end_pos": 330, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn330", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "374", "end_pos": "374", "site_lbl": "Asn374", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 374, "start_aa": "Asn", "end_pos": 374, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn374", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "439", "end_pos": "439", "site_lbl": "Asn439", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 439, "start_aa": "Asn", "end_pos": 439, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn439", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "484", "end_pos": "484", "site_lbl": "Asn484", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 484, "start_aa": "Asn", "end_pos": 484, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn484", "evidence": [ { "id": "F4JSH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSH1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "655", "end_pos": "655", "site_lbl": "Ser655", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSH1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "661", "end_pos": "661", "site_lbl": "Ser661", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSH1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "722", "end_pos": "722", "site_lbl": "Ser722", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSH1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "724", "end_pos": "724", "site_lbl": "Ser724", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSH1" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JSH1-1", "start_pos": "92", "end_pos": "92", "site_lbl": "Ser92", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JSH1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JSH1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JT76-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1034, "chemical_mass": 113865.0, "gene_names": "VPS54;ARABIDOPSIS THALIANA VPS54 HOMOLOG;ATVPS54;F24J7.50;F24J7_50;VPS54", "protein_name": "Vacuolar protein sorting-associated protein 54, chloroplastic", "disease": [], "cellular_component": [ { "name": "GARP complex", "id": "GO:0000938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000938", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" }, { "name": "Golgi to vacuole transport", "id": "GO:0006896", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006896", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" } ], "molecular_function": [ { "name": "syntaxin binding", "id": "GO:0019905", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019905", "evidence": [ { "database": "UniProtKB", "id": "F4JT76", "url": "https://www.uniprot.org/uniprotkb/F4JT76" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "27", "end_pos": "27", "site_lbl": "Ser27", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "28", "end_pos": "28", "site_lbl": "Ser28", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "32", "end_pos": "32", "site_lbl": "Ser32", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "39", "end_pos": "39", "site_lbl": "Ser39", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "401", "end_pos": "401", "site_lbl": "Tyr401", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "407", "end_pos": "407", "site_lbl": "Ser407", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "41", "end_pos": "41", "site_lbl": "Ser41", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4JT76-1", "start_pos": "817", "end_pos": "817", "site_lbl": "Thr817", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JT76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JT76" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JTE7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 298, "chemical_mass": 33071.0, "gene_names": "GPP1;F14M19.120;F14M19_120;GPP1;PYRP3;glycerol-3-phosphatase 1", "protein_name": "(DL)-glycerol-3-phosphatase 1, mitochondrial", "disease": [], "biological_process": [ { "name": "dephosphorylation", "id": "GO:0016311", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016311", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "glycerol biosynthetic process", "id": "GO:0006114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006114", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "riboflavin biosynthetic process", "id": "GO:0009231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009231", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "sn-glycerol 1-phosphatase activity", "id": "GO:0000121", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000121", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "sn-glycerol 3-phosphatase activity", "id": "GO:0043136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043136", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" }, { "name": "5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity", "id": "GO:0043726", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043726", "evidence": [ { "database": "UniProtKB", "id": "F4JTE7", "url": "https://www.uniprot.org/uniprotkb/F4JTE7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JTE7-1", "start_pos": "100", "end_pos": "100", "site_lbl": "Tyr100", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTE7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTE7" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JTN2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 485, "chemical_mass": 54711.0, "gene_names": "LAZ1;F22I13.130;F22I13_130;LAZ1;LAZARUS 1", "protein_name": "Protein LAZ1", "disease": [], "cellular_component": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" } ], "molecular_function": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" } ], "biological_process": [ { "name": "vacuole organization", "id": "GO:0007033", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007033", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "programmed cell death", "id": "GO:0012501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012501", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "vesicle-mediated transport to the plasma membrane", "id": "GO:0098876", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098876", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" }, { "name": "negative regulation of brassinosteroid mediated signaling pathway", "id": "GO:1900458", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900458", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JTN2-1", "start_pos": "421", "end_pos": "421", "site_lbl": "Ser421", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTN2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JTN2-1", "start_pos": "438", "end_pos": "438", "site_lbl": "Ser438", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTN2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JTN2-1", "start_pos": "440", "end_pos": "440", "site_lbl": "Ser440", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTN2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTN2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "F4JTN2-1", "start_pos": "360", "end_pos": "360", "site_lbl": "Asp360", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In laz1-4; Altered subcellular localization and reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "F4JTN2", "url": "https://www.uniprot.org/uniprotkb/F4JTN2" }, { "database": "PubMed", "id": "20830211", "url": "https://glygen.org/publication/PubMed/20830211" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JTS8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 2729, "chemical_mass": 306349.0, "gene_names": "NOV;EMB2597;EMBRYO DEFECTIVE 2597;F18A5.130;F18A5.140;F18A5_140;NO VEIN;NOV", "protein_name": "Protein NO VEIN", "disease": [], "biological_process": [ { "name": "cell fate specification", "id": "GO:0001708", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001708", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" }, { "name": "stem cell population maintenance", "id": "GO:0019827", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019827", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" }, { "name": "auxin polar transport", "id": "GO:0009926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009926", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" }, { "name": "leaf vascular tissue pattern formation", "id": "GO:0010305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010305", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JTS8-1", "start_pos": "1822", "end_pos": "1822", "site_lbl": "Tyr1822", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JTS8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JTS8" } ] } ] }, { "uniprot_canonical_ac": "F4JTS8-1", "start_pos": "855", "end_pos": "855", "site_lbl": "Pro855", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "S", "comment": "In nov-1; many auxin-dependent development defects including narrow rosette leaves with few veins. Abnormal presence of starch granules in roots columella stem cells associated with an altered maintenance of cortex/endodermis stem cells. Enhanced effect of 1-naphthylphthalamic acid (NPA), an inhibitor of polar auxin transport. Disturbed subcellular localizations of PIN1, PIN2, PIN3, PIN4 and PIN7 in leaf primordia and root tips.", "evidence": [ { "database": "UniProtKB", "id": "F4JTS8", "url": "https://www.uniprot.org/uniprotkb/F4JTS8" }, { "database": "PubMed", "id": "19880797", "url": "https://glygen.org/publication/PubMed/19880797" }, { "database": "PubMed", "id": "20729639", "url": "https://glygen.org/publication/PubMed/20729639" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JUI3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 283, "chemical_mass": 31776.0, "gene_names": "BPC5;ATBPC5;BBR/BPC5;BPC5;F19H22.10;F19H22_10;basic pentacysteine 5", "protein_name": "Protein BASIC PENTACYSTEINE5", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" }, { "name": "response to ethylene", "id": "GO:0009723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009723", "evidence": [ { "database": "UniProtKB", "id": "F4JUI3", "url": "https://www.uniprot.org/uniprotkb/F4JUI3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JVH1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 907, "chemical_mass": 102031.0, "gene_names": "CFM3B;ATCFM3B;CFM3B;CRM family member 3B;DL3295C;FCAALL.243;SPRT2;dl3295c", "protein_name": "CRM-domain containing factor CFM3B, chloroplastic", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "Group II intron splicing", "id": "GO:0000373", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000373", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "plastid rRNA transcription", "id": "GO:0042794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042794", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" } ], "cellular_component": [ { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4JVH1", "url": "https://www.uniprot.org/uniprotkb/F4JVH1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JVI3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 493, "chemical_mass": 55961.0, "gene_names": "MTERF5;MDA1;MTERF DEFECTIVE IN Arabidopsis1", "protein_name": "Transcription termination factor MTERF5, chloroplastic", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "DNA-templated transcription termination", "id": "GO:0006353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006353", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" }, { "name": "plastid transcription", "id": "GO:0042793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042793", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" } ], "molecular_function": [ { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "F4JVI3", "url": "https://www.uniprot.org/uniprotkb/F4JVI3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JVN6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1380, "chemical_mass": 152368.0, "gene_names": "TPP2;T13K14.10;T13K14_10;TPP2;tripeptidyl peptidase ii", "protein_name": "Tripeptidyl-peptidase 2", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "tripeptidyl-peptidase activity", "id": "GO:0008240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008240", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "salicylic acid binding", "id": "GO:1901149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901149", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "cytosolic ribosome", "id": "GO:0022626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022626", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F4JVN6", "url": "https://www.uniprot.org/uniprotkb/F4JVN6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JVN6-1", "start_pos": "1325", "end_pos": "1325", "site_lbl": "Thr1325", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JVN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JVN6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JWB3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 833, "chemical_mass": 92588.0, "gene_names": "MTM2;AtMTM2;MTM2;T32M21.150;T32M21_150;myotubularin 2", "protein_name": "Phosphatidylinositol-3-phosphatase myotubularin-2", "disease": [], "molecular_function": [ { "name": "phosphatidylinositol-3,5-bisphosphate phosphatase activity", "id": "GO:0106018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106018", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" }, { "name": "phosphoprotein phosphatase activity", "id": "GO:0004721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004721", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" }, { "name": "phosphatidylinositol-3-phosphate phosphatase activity", "id": "GO:0004438", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004438", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" }, { "name": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity", "id": "GO:0052629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052629", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" }, { "name": "phosphatidylinositol dephosphorylation", "id": "GO:0046856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046856", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JWB3-1", "start_pos": "191", "end_pos": "191", "site_lbl": "Tyr191", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JWB3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JWB3" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "F4JWB3-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Leu250", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "W", "comment": "Modified subcellular location at granular particles.", "evidence": [ { "database": "UniProtKB", "id": "F4JWB3", "url": "https://www.uniprot.org/uniprotkb/F4JWB3" }, { "database": "PubMed", "id": "22324391", "url": "https://glygen.org/publication/PubMed/22324391" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JY12-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1639, "chemical_mass": 183399.0, "gene_names": "GFS12;BCHD;T28N17.10", "protein_name": "Protein GFS12", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "positive regulation of early endosome to late endosome transport", "id": "GO:2000643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000643", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" }, { "name": "protein targeting to vacuole", "id": "GO:0006623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006623", "evidence": [ { "database": "UniProtKB", "id": "F4JY12", "url": "https://www.uniprot.org/uniprotkb/F4JY12" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JY12-1", "start_pos": "1131", "end_pos": "1131", "site_lbl": "Ser1131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY12", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY12" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JY12-1", "start_pos": "647", "end_pos": "647", "site_lbl": "Ser647", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY12", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY12" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JY12-1", "start_pos": "668", "end_pos": "668", "site_lbl": "Ser668", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY12", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY12" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JY24-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1069, "chemical_mass": 123888.0, "gene_names": "CHR17;CHR17;T1A4.2;chromatin remodeling factor17", "protein_name": "ISWI chromatin-remodeling complex ATPase CHR17", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "nucleosome binding", "id": "GO:0031491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031491", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "nucleosome array spacer activity", "id": "GO:0140750", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140750", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "ISWI-type complex", "id": "GO:0031010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031010", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" } ], "biological_process": [ { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "positive regulation of cellular response to heat", "id": "GO:1900036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900036", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "F4JY24", "url": "https://www.uniprot.org/uniprotkb/F4JY24" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "1035", "end_pos": "1035", "site_lbl": "Thr1035", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1035, "start_aa": "Thr", "end_pos": 1035, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1035", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "1048", "end_pos": "1048", "site_lbl": "Ser1048", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY25", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY25" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "1050", "end_pos": "1050", "site_lbl": "Ser1050", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY25", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY25" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "142", "end_pos": "142", "site_lbl": "Ser142", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "16", "end_pos": "16", "site_lbl": "Ser16", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "17", "end_pos": "17", "site_lbl": "Ser17", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "58", "end_pos": "58", "site_lbl": "Ser58", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "F4JY24-1", "start_pos": "993", "end_pos": "993", "site_lbl": "Ser993", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY24", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY24" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JY37-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1366, "chemical_mass": 152283.0, "gene_names": "RUK;EMB3013;EMBRYO DEFECTIVE 3013;RUK;RUNKEL;T1A4.80;T1A4_80", "protein_name": "Serine/threonine-protein kinase RUNKEL", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" } ], "cellular_component": [ { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "preprophase band", "id": "GO:0009574", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009574", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" } ], "biological_process": [ { "name": "cellularization", "id": "GO:0007349", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007349", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "cytokinesis by cell plate formation", "id": "GO:0000911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000911", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "phragmoplast assembly", "id": "GO:0000914", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000914", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "microsporogenesis", "id": "GO:0009556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009556", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "endosperm cellularization", "id": "GO:0010342", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010342", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" }, { "name": "radial microtubular system formation", "id": "GO:0010245", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010245", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "1146", "end_pos": "1146", "site_lbl": "Ser1146", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY37" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "150", "end_pos": "150", "site_lbl": "Ser150", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY37" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "291", "end_pos": "291", "site_lbl": "Thr291", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY37" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "687", "end_pos": "687", "site_lbl": "Ser687", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY37" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "937", "end_pos": "937", "site_lbl": "Ser937", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JY37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JY37" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "121", "end_pos": "121", "site_lbl": "Asp121", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Able to rescue the seedling lethality of disrupted plants, but later retarded development, and cytokinesis defects observed in flowers.", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" }, { "database": "PubMed", "id": "19268593", "url": "https://glygen.org/publication/PubMed/19268593" } ] } ] }, { "uniprot_canonical_ac": "F4JY37-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Lys33", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "W", "comment": "Able to rescue the seedling lethality of disrupted plants, but later retarded development, and cytokinesis defects observed in flowers.", "evidence": [ { "database": "UniProtKB", "id": "F4JY37", "url": "https://www.uniprot.org/uniprotkb/F4JY37" }, { "database": "PubMed", "id": "19268593", "url": "https://glygen.org/publication/PubMed/19268593" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JYE9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 530, "chemical_mass": 56904.0, "gene_names": "DHFS;A. THALIANA DHFS-FPGS HOMOLOG A;ATDFA;DFA;DHFS-FPGS HOMOLOG A;EMB9;EMBRYO DEFECTIVE 9;GLA1;GLOBULAR ARREST1;MYC6.18;MYC6_18", "protein_name": "Dihydrofolate synthetase", "disease": [], "biological_process": [ { "name": "tetrahydrofolate biosynthetic process", "id": "GO:0046654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046654", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "one-carbon metabolic process", "id": "GO:0006730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006730", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "folic acid-containing compound biosynthetic process", "id": "GO:0009396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009396", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" } ], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "tetrahydrofolylpolyglutamate synthase activity", "id": "GO:0004326", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004326", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "dihydrofolate synthase activity", "id": "GO:0008841", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008841", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "F4JYE9", "url": "https://www.uniprot.org/uniprotkb/F4JYE9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JYE9-1", "start_pos": "108", "end_pos": "108", "site_lbl": "Thr108", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JYE9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JYE9" } ] } ] }, { "uniprot_canonical_ac": "F4JYE9-1", "start_pos": "109", "end_pos": "109", "site_lbl": "Ser109", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JYE9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JYE9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JYG0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 760, "chemical_mass": 83109.0, "gene_names": "PIAL2;MBK23.10;MBK23_10;PIAL2;PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 2", "protein_name": "E4 SUMO-protein ligase PIAL2", "disease": [], "molecular_function": [ { "name": "SUMO ligase activity", "id": "GO:0061665", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061665", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "SUMO transferase activity", "id": "GO:0019789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019789", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" } ], "biological_process": [ { "name": "protein sumoylation", "id": "GO:0016925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016925", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" }, { "name": "regulation of gene silencing by regulatory ncRNA", "id": "GO:0060966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060966", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "542", "end_pos": "542", "site_lbl": "Thr542", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 542, "start_aa": "Thr", "end_pos": 542, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr542", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "543", "end_pos": "543", "site_lbl": "Thr543", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 543, "start_aa": "Thr", "end_pos": 543, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr543", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "544", "end_pos": "544", "site_lbl": "Ser544", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 544, "start_aa": "Ser", "end_pos": 544, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser544", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "545", "end_pos": "545", "site_lbl": "Thr545", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 545, "start_aa": "Thr", "end_pos": 545, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr545", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "548", "end_pos": "548", "site_lbl": "Thr548", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 548, "start_aa": "Thr", "end_pos": 548, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr548", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Ser557", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 557, "start_aa": "Ser", "end_pos": 557, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser557", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "604", "end_pos": "604", "site_lbl": "Thr604", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 604, "start_aa": "Thr", "end_pos": 604, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr604", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "605", "end_pos": "605", "site_lbl": "Ser605", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 605, "start_aa": "Ser", "end_pos": 605, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser605", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "607", "end_pos": "607", "site_lbl": "Ser607", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 607, "start_aa": "Ser", "end_pos": 607, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser607", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "612", "end_pos": "612", "site_lbl": "Ser612", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 612, "start_aa": "Ser", "end_pos": 612, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser612", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "613", "end_pos": "613", "site_lbl": "Ser613", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 613, "start_aa": "Ser", "end_pos": 613, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser613", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "651", "end_pos": "651", "site_lbl": "Thr651", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 651, "start_aa": "Thr", "end_pos": 651, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr651", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "716", "end_pos": "716", "site_lbl": "Thr716", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 716, "start_aa": "Thr", "end_pos": 716, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr716", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "718", "end_pos": "718", "site_lbl": "Ser718", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 718, "start_aa": "Ser", "end_pos": 718, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser718", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "721", "end_pos": "721", "site_lbl": "Thr721", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 721, "start_aa": "Thr", "end_pos": 721, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr721", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "722", "end_pos": "722", "site_lbl": "Ser722", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 722, "start_aa": "Ser", "end_pos": 722, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser722", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "730", "end_pos": "730", "site_lbl": "Thr730", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 730, "start_aa": "Thr", "end_pos": 730, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr730", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "F4JYG0", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/F4JYG0" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "759", "end_pos": "759", "site_lbl": "Thr759", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 759, "start_aa": "Thr", "end_pos": 759, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr759", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "247", "end_pos": "247", "site_lbl": "Thr247", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JYG0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JYG0" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "329", "end_pos": "329", "site_lbl": "Cys329", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Abolished SUMO ligase activity but normal ability to regulate transcriptional gene silencing (TGS); when associated with A-331. Slight reduction of SUMO ligase activity; when associated with A-355. Complete loss of activity; when associated with A-355 and 425-A--A-428.", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" }, { "database": "PubMed", "id": "25415977", "url": "https://glygen.org/publication/PubMed/25415977" }, { "database": "PubMed", "id": "27113777", "url": "https://glygen.org/publication/PubMed/27113777" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "331", "end_pos": "331", "site_lbl": "His331", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Abolished SUMO ligase activity but normal ability to regulate transcriptional gene silencing (TGS); when associated with A-329.", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" }, { "database": "PubMed", "id": "27113777", "url": "https://glygen.org/publication/PubMed/27113777" } ] } ] }, { "uniprot_canonical_ac": "F4JYG0-1", "start_pos": "355", "end_pos": "355", "site_lbl": "Cys355", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Slight reduction of SUMO ligase activity; when associated with A-329. Complete loss of activity; when associated with A-329 and 425-A--A-428.", "evidence": [ { "database": "UniProtKB", "id": "F4JYG0", "url": "https://www.uniprot.org/uniprotkb/F4JYG0" }, { "database": "PubMed", "id": "25415977", "url": "https://glygen.org/publication/PubMed/25415977" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JZC2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 680, "chemical_mass": 76351.0, "gene_names": "ENGASE1;AtENGase85A;ENGASE85A;ENGase85A;Endo-beta-N-acetyglucosaminidase 85A;K18I23.27;K18I23_27", "protein_name": "Cytosolic endo-beta-N-acetylglucosaminidase 1", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" } ], "biological_process": [ { "name": "protein deglycosylation", "id": "GO:0006517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006517", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" }, { "name": "N-glycan processing", "id": "GO:0006491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006491", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" } ], "molecular_function": [ { "name": "mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity", "id": "GO:0033925", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033925", "evidence": [ { "database": "UniProtKB", "id": "F4JZC2", "url": "https://www.uniprot.org/uniprotkb/F4JZC2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JZN6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 331, "chemical_mass": 35835.0, "gene_names": "TSC10B;T24G5.100;T24G5_100;T24G5;TSC10B", "protein_name": "3-dehydrosphinganine reductase TSC10B", "disease": [], "biological_process": [ { "name": "3-keto-sphinganine metabolic process", "id": "GO:0006666", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006666", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" }, { "name": "sphingolipid biosynthetic process", "id": "GO:0030148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030148", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" } ], "molecular_function": [ { "name": "3-dehydrosphinganine reductase activity", "id": "GO:0047560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047560", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" }, { "name": "NADPH binding", "id": "GO:0070402", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070402", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" } ], "cellular_component": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4JZN6", "url": "https://www.uniprot.org/uniprotkb/F4JZN6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JZN6-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Ser131", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZN6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "F4JZN6-1", "start_pos": "144", "end_pos": "144", "site_lbl": "Thr144", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZN6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZN6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4JZY1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1586, "chemical_mass": 181978.0, "gene_names": "CIP1;CIP1;COP1-interactive protein 1;K16L22.7;K16L22_7", "protein_name": "COP1-interactive protein 1", "disease": [], "molecular_function": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "structural constituent of cytoskeleton", "id": "GO:0005200", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005200", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "regulation of protein import into nucleus", "id": "GO:0042306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042306", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "positive regulation of abscisic acid-activated signaling pathway", "id": "GO:0009789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009789", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" }, { "name": "cellular response to abscisic acid stimulus", "id": "GO:0071215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071215", "evidence": [ { "database": "UniProtKB", "id": "F4JZY1", "url": "https://www.uniprot.org/uniprotkb/F4JZY1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4JZY1-1", "start_pos": "12", "end_pos": "12", "site_lbl": "Ser12", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZY1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4JZY1-1", "start_pos": "192", "end_pos": "192", "site_lbl": "Ser192", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZY1" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JZY1-1", "start_pos": "293", "end_pos": "293", "site_lbl": "Ser293", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZY1" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "F4JZY1-1", "start_pos": "534", "end_pos": "534", "site_lbl": "Ser534", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZY1" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4JZY1-1", "start_pos": "801", "end_pos": "801", "site_lbl": "Ser801", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4JZY1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JZY1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K0A6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1220, "chemical_mass": 138562.0, "gene_names": "ATM2;VIII-2;ARABIDOPSIS THALIANA MYOSIN 1;ARABIDOPSIS THALIANA MYOSIN 4;ATM2;ATM4;ATMYOS1;MDK4.10;MDK4_10;MYOS1;MYOSIN 4;myosin 2", "protein_name": "Myosin-2", "disease": [], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "cytoskeletal motor activity", "id": "GO:0003774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003774", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "microfilament motor activity", "id": "GO:0000146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000146", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "myosin complex", "id": "GO:0016459", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016459", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" } ], "biological_process": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" }, { "name": "actin filament-based movement", "id": "GO:0030048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030048", "evidence": [ { "database": "UniProtKB", "id": "F4K0A6", "url": "https://www.uniprot.org/uniprotkb/F4K0A6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Thr76", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 76, "start_aa": "Thr", "end_pos": 76, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr76", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "1118", "end_pos": "1118", "site_lbl": "Thr1118", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "1129", "end_pos": "1129", "site_lbl": "Ser1129", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "21", "end_pos": "21", "site_lbl": "Ser21", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "40", "end_pos": "40", "site_lbl": "Ser40", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "44", "end_pos": "44", "site_lbl": "Ser44", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "951", "end_pos": "951", "site_lbl": "Ser951", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] } ] }, { "uniprot_canonical_ac": "F4K0A6-1", "start_pos": "987", "end_pos": "987", "site_lbl": "Ser987", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4K0A6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4K0A6" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K1A8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K1A8", "url": "https://www.uniprot.org/uniprotkb/F4K1A8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 147, "chemical_mass": 16729.0, "gene_names": "", "protein_name": "", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4K1A8", "url": "https://www.uniprot.org/uniprotkb/F4K1A8" } ], "pmid": "" }, { "name": "U12-type spliceosomal complex", "id": "GO:0005689", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005689", "evidence": [ { "database": "UniProtKB", "id": "F4K1A8", "url": "https://www.uniprot.org/uniprotkb/F4K1A8" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4K1A8", "url": "https://www.uniprot.org/uniprotkb/F4K1A8" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "F4K1A8", "url": "https://www.uniprot.org/uniprotkb/F4K1A8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8RYD9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 252, "chemical_mass": 29698.0, "gene_names": "TT16;ABS;AGAMOUS-like 32;AGL32;ARABIDOPSIS BSISTER;MKD15.12;MKD15_12;TRANSPARENT TESTA16;TT16", "protein_name": "Protein TRANSPARENT TESTA 16", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of cell differentiation", "id": "GO:0045595", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045595", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "plant ovule development", "id": "GO:0048481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048481", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of double fertilization forming a zygote and endosperm", "id": "GO:0080155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080155", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "integument development", "id": "GO:0080060", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080060", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "regulation of proanthocyanidin biosynthetic process", "id": "GO:2000029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000029", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" }, { "name": "floral organ development", "id": "GO:0048437", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048437", "evidence": [ { "database": "UniProtKB", "id": "Q8RYD9", "url": "https://www.uniprot.org/uniprotkb/Q8RYD9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O23144-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 612, "chemical_mass": 68879.0, "gene_names": "PPI1;F27G19.100;F27G19_100;PPI1;proton pump interactor 1", "protein_name": "Proton pump-interactor 1", "disease": [], "biological_process": [ { "name": "regulation of proton transport", "id": "GO:0010155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010155", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" } ], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "cytoplasmic stress granule", "id": "GO:0010494", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010494", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O23144-1", "start_pos": "399", "end_pos": "399", "site_lbl": "Thr399", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 399, "start_aa": "Thr", "end_pos": 399, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr399", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "164", "end_pos": "164", "site_lbl": "Ser164", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "169", "end_pos": "169", "site_lbl": "Ser169", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "197", "end_pos": "197", "site_lbl": "Ser197", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "403", "end_pos": "403", "site_lbl": "Thr403", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "421", "end_pos": "421", "site_lbl": "Ser421", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "525", "end_pos": "525", "site_lbl": "Thr525", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "529", "end_pos": "529", "site_lbl": "Thr529", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "531", "end_pos": "531", "site_lbl": "Thr531", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "533", "end_pos": "533", "site_lbl": "Thr533", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] }, { "uniprot_canonical_ac": "O23144-1", "start_pos": "540", "end_pos": "540", "site_lbl": "Ser540", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "O23144", "url": "https://www.uniprot.org/uniprotkb/O23144" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "O23144", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23144" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "19688752", "url": "https://glygen.org/publication/PubMed/19688752" }, { "database": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" }, { "database": "PubMed", "id": "20733066", "url": "https://glygen.org/publication/PubMed/20733066" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9SZJ6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 228, "chemical_mass": 26411.0, "gene_names": "AGL21;AGAMOUS-like 21;AGL21;F20D10.60;F20D10_60", "protein_name": "Agamous-like MADS-box protein AGL21", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "Q9SZJ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZJ6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q84MB2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 361, "chemical_mass": 38733.0, "gene_names": "TIFY8;F4D11.230;F4D11_230;TIFY domain protein 8;TIFY8", "protein_name": "Protein TIFY 8", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" }, { "name": "negative regulation of gene expression", "id": "GO:0010629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010629", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" }, { "name": "regulation of defense response", "id": "GO:0031347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031347", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" }, { "name": "regulation of jasmonic acid mediated signaling pathway", "id": "GO:2000022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000022", "evidence": [ { "database": "UniProtKB", "id": "Q84MB2", "url": "https://www.uniprot.org/uniprotkb/Q84MB2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9SHI2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1101, "chemical_mass": 122100.0, "gene_names": "F20D23.7;F20D23_7", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "161", "end_pos": "161", "site_lbl": "Asn161", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 161, "start_aa": "Asn", "end_pos": 161, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn161", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "174", "end_pos": "174", "site_lbl": "Asn174", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 174, "start_aa": "Asn", "end_pos": 174, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn174", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "236", "end_pos": "236", "site_lbl": "Asn236", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 236, "start_aa": "Asn", "end_pos": 236, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn236", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "257", "end_pos": "257", "site_lbl": "Asn257", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 257, "start_aa": "Asn", "end_pos": 257, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn257", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "368", "end_pos": "368", "site_lbl": "Asn368", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 368, "start_aa": "Asn", "end_pos": 368, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn368", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "39", "end_pos": "39", "site_lbl": "Asn39", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 39, "start_aa": "Asn", "end_pos": 39, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn39", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "404", "end_pos": "404", "site_lbl": "Asn404", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 404, "start_aa": "Asn", "end_pos": 404, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn404", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Asn476", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 476, "start_aa": "Asn", "end_pos": 476, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn476", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "490", "end_pos": "490", "site_lbl": "Asn490", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 490, "start_aa": "Asn", "end_pos": 490, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn490", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "510", "end_pos": "510", "site_lbl": "Asn510", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 510, "start_aa": "Asn", "end_pos": 510, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn510", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "521", "end_pos": "521", "site_lbl": "Asn521", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 521, "start_aa": "Asn", "end_pos": 521, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn521", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "529", "end_pos": "529", "site_lbl": "Asn529", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 529, "start_aa": "Asn", "end_pos": 529, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn529", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Asn57", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 57, "start_aa": "Asn", "end_pos": 57, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn57", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "626", "end_pos": "626", "site_lbl": "Asn626", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 626, "start_aa": "Asn", "end_pos": 626, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn626", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "631", "end_pos": "631", "site_lbl": "Asn631", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 631, "start_aa": "Asn", "end_pos": 631, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn631", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "674", "end_pos": "674", "site_lbl": "Asn674", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 674, "start_aa": "Asn", "end_pos": 674, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn674", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "728", "end_pos": "728", "site_lbl": "Asn728", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 728, "start_aa": "Asn", "end_pos": 728, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn728", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Asn78", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 78, "start_aa": "Asn", "end_pos": 78, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn78", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "97", "end_pos": "97", "site_lbl": "Asn97", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 97, "start_aa": "Asn", "end_pos": 97, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn97", "evidence": [ { "id": "Q9SHI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "788", "end_pos": "788", "site_lbl": "Thr788", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "796", "end_pos": "796", "site_lbl": "Thr796", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "874", "end_pos": "874", "site_lbl": "Tyr874", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "913", "end_pos": "913", "site_lbl": "Tyr913", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "960", "end_pos": "960", "site_lbl": "Ser960", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "968", "end_pos": "968", "site_lbl": "Tyr968", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "975", "end_pos": "975", "site_lbl": "Tyr975", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] }, { "uniprot_canonical_ac": "Q9SHI2-1", "start_pos": "976", "end_pos": "976", "site_lbl": "Thr976", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SHI2", "url": "https://www.uniprot.org/uniprotkb/Q9SHI2" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q93ZS4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 632, "chemical_mass": 70171.0, "gene_names": "CIK1;NIK3;AtNIK3;F8A5.31;F8A5_31;NIK3;NSP-interacting kinase 3", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 1", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "coreceptor activity", "id": "GO:0015026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015026", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" }, { "name": "homeostasis of number of meristem cells", "id": "GO:0007639", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007639", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "131", "end_pos": "131", "site_lbl": "Asn131", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 131, "start_aa": "Asn", "end_pos": 131, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn131", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "155", "end_pos": "155", "site_lbl": "Asn155", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 155, "start_aa": "Asn", "end_pos": 155, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn155", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "181", "end_pos": "181", "site_lbl": "Asn181", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 181, "start_aa": "Asn", "end_pos": 181, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn181", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "210", "end_pos": "210", "site_lbl": "Asn210", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 210, "start_aa": "Asn", "end_pos": 210, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn210", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "96", "end_pos": "96", "site_lbl": "Asn96", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 96, "start_aa": "Asn", "end_pos": 96, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn96", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "298", "end_pos": "298", "site_lbl": "Thr298", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "324", "end_pos": "324", "site_lbl": "Thr324", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "382", "end_pos": "382", "site_lbl": "Ser382", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "385", "end_pos": "385", "site_lbl": "Ser385", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "461", "end_pos": "461", "site_lbl": "Thr461", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "462", "end_pos": "462", "site_lbl": "Thr462", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Thr467", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "475", "end_pos": "475", "site_lbl": "Tyr475", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "477", "end_pos": "477", "site_lbl": "Ser477", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "478", "end_pos": "478", "site_lbl": "Thr478", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "482", "end_pos": "482", "site_lbl": "Ser482", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_canonical_ac": "Q93ZS4-1", "start_pos": "557", "end_pos": "557", "site_lbl": "Thr557", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q93ZS4", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22703-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 292, "chemical_mass": 34398.0, "gene_names": "RBGB1;RZ1B;AtRZ-1b;F8A5.17;F8A5_17;RZ-1b", "protein_name": "Glycine-rich RNA-binding protein RZ1B", "disease": [], "biological_process": [ { "name": "positive regulation of mRNA splicing, via spliceosome", "id": "GO:0048026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048026", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22703-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Ser20", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "O22703", "url": "https://www.uniprot.org/uniprotkb/O22703" } ] } ] }, { "uniprot_canonical_ac": "O22703-1", "start_pos": "288", "end_pos": "288", "site_lbl": "Ser288", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22703", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22703" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8W4J8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 267, "chemical_mass": 28842.0, "gene_names": "TIFY7;F5A18.12;F5A18_12;JASMONATE-ZIM-DOMAIN PROTEIN 9;JAZ9;TIFY7", "protein_name": "Protein TIFY 7", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" }, { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" }, { "name": "regulation of defense response", "id": "GO:0031347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031347", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" }, { "name": "regulation of jasmonic acid mediated signaling pathway", "id": "GO:2000022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000022", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8W4J8-1", "start_pos": "223", "end_pos": "223", "site_lbl": "Arg223", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ] } ] }, { "uniprot_canonical_ac": "Q8W4J8-1", "start_pos": "224", "end_pos": "224", "site_lbl": "Lys224", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ] } ] }, { "uniprot_canonical_ac": "Q8W4J8-1", "start_pos": "233", "end_pos": "233", "site_lbl": "Lys233", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ] } ] }, { "uniprot_canonical_ac": "Q8W4J8-1", "start_pos": "234", "end_pos": "234", "site_lbl": "Arg234", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "Loss of interaction with COI1 and resistant to coronatine-mediated degradation. Loss of nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ] } ] }, { "uniprot_canonical_ac": "Q8W4J8-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Lys235", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on interaction with MYC2 and nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "Q8W4J8", "url": "https://www.uniprot.org/uniprotkb/Q8W4J8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P29381-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 248, "chemical_mass": 28336.0, "gene_names": "AGL1;SHP1;AGAMOUS-like 1;AGL1;SHATTERPROOF 1;SHP1;T20N10_130", "protein_name": "Agamous-like MADS-box protein AGL1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "fruit dehiscence", "id": "GO:0010047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010047", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "carpel development", "id": "GO:0048440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048440", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "plant ovule development", "id": "GO:0048481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048481", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "post-embryonic development", "id": "GO:0009791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009791", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" }, { "name": "reproductive structure development", "id": "GO:0048608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048608", "evidence": [ { "database": "UniProtKB", "id": "P29381", "url": "https://www.uniprot.org/uniprotkb/P29381" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8LAL2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 269, "chemical_mass": 30124.0, "gene_names": "IAA26;PAP1;IAA26;MDC8.13;PAP1;indole-3-acetic acid inducible 26;phytochrome-associated protein 1", "protein_name": "Auxin-responsive protein IAA26", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q8LAL2", "url": "https://www.uniprot.org/uniprotkb/Q8LAL2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q949N0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 549, "chemical_mass": 62356.0, "gene_names": "NAC053;AIF;ANAC053;ANTHER INDEHISCENCE FACTOR;F13M14.22;F18K10.7;NAC domain containing protein 53;NAC with transmembrane motif 1-like 4;NAC053;NTL4;anac053", "protein_name": "NAC domain-containing protein 53", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "regulation of reactive oxygen species metabolic process", "id": "GO:2000377", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000377", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "drought recovery", "id": "GO:0009819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009819", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" }, { "name": "leaf senescence", "id": "GO:0010150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010150", "evidence": [ { "database": "UniProtKB", "id": "Q949N0", "url": "https://www.uniprot.org/uniprotkb/Q949N0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q949N0-1", "start_pos": "478", "end_pos": "478", "site_lbl": "Thr478", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 478, "start_aa": "Thr", "end_pos": 478, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr478", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q949N0-1", "start_pos": "8", "end_pos": "8", "site_lbl": "Ser8", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q949N0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q949N0" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8GXJ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 552, "chemical_mass": 60020.0, "gene_names": "HDA15;ATHDA15;HDA15;MYF24_23;histone deacetylase 15", "protein_name": "Histone deacetylase 15", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "protein homotetramerization", "id": "GO:0051289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051289", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "response to heat", "id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "positive regulation of abscisic acid-activated signaling pathway", "id": "GO:0009789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009789", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "DNA-mediated transformation", "id": "GO:0009294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009294", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "regulation of photosynthesis, light reaction", "id": "GO:0042548", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042548", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "positive regulation of photomorphogenesis", "id": "GO:2000306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000306", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "regulation of developmental process", "id": "GO:0050793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050793", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "histone deacetylase activity", "id": "GO:0004407", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004407", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" }, { "name": "histone deacetylase activity, hydrolytic mechanism", "id": "GO:0141221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141221", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "448", "end_pos": "448", "site_lbl": "Ser448", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GXJ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GXJ1" }, { "database": "PubMed", "id": "32878973", "url": "https://glygen.org/publication/PubMed/32878973" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "452", "end_pos": "452", "site_lbl": "Ser452", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GXJ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GXJ1" }, { "database": "PubMed", "id": "32878973", "url": "https://glygen.org/publication/PubMed/32878973" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "276", "end_pos": "276", "site_lbl": "His276", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "277", "end_pos": "277", "site_lbl": "His277", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "282", "end_pos": "282", "site_lbl": "His282", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "No effect on enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "313", "end_pos": "313", "site_lbl": "Asp313", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Loss of enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "315", "end_pos": "315", "site_lbl": "His315", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] }, { "uniprot_canonical_ac": "Q8GXJ1-1", "start_pos": "316", "end_pos": "316", "site_lbl": "His316", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of enzymatic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8GXJ1", "url": "https://www.uniprot.org/uniprotkb/Q8GXJ1" }, { "database": "PubMed", "id": "31061103", "url": "https://glygen.org/publication/PubMed/31061103" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P38418-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 896, "chemical_mass": 102046.0, "gene_names": "LOX2;ARABIODOPSIS THALIANA LIPOXYGENASE 2;ATLOX2;LOX2;T14D3.80;lipoxygenase 2", "protein_name": "Lipoxygenase 2, chloroplastic", "disease": [], "biological_process": [ { "name": "response to other organism", "id": "GO:0051707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051707", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "lipid oxidation", "id": "GO:0034440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034440", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to bacterium", "id": "GO:0009617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009617", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to fungus", "id": "GO:0009620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009620", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "oxylipin biosynthetic process", "id": "GO:0031408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031408", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "jasmonic acid biosynthetic process", "id": "GO:0009695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009695", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "green leaf volatile biosynthetic process", "id": "GO:0010597", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010597", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "response to herbivore", "id": "GO:0080027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080027", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "fatty acid biosynthetic process", "id": "GO:0006633", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006633", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" } ], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen", "id": "GO:0016702", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016702", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "linoleate 13S-lipoxygenase activity", "id": "GO:0016165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016165", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "salicylic acid binding", "id": "GO:1901149", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901149", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "chloroplast stroma", "id": "GO:0009570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009570", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "P38418", "url": "https://www.uniprot.org/uniprotkb/P38418" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P38418-1", "start_pos": "488", "end_pos": "488", "site_lbl": "Ser488", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P38418", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P38418" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" } ] } ] }, { "uniprot_canonical_ac": "P38418-1", "start_pos": "787", "end_pos": "787", "site_lbl": "Ser787", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P38418", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P38418" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P49678-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 174, "chemical_mass": 19910.0, "gene_names": "IAA2;IAA2;MXC7.6;indole-3-acetic acid inducible 2", "protein_name": "Auxin-responsive protein IAA2", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "P49678", "url": "https://www.uniprot.org/uniprotkb/P49678" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P49678-1", "start_pos": "79", "end_pos": "79", "site_lbl": "Tyr79", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P49678", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P49678" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9M2R4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 662, "chemical_mass": 72421.0, "gene_names": "", "protein_name": "", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "pmid": "" } ], "cellular_component": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9M2R4", "url": "https://www.uniprot.org/uniprotkb/Q9M2R4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9M2R4-1", "start_pos": "525", "end_pos": "525", "site_lbl": "Thr525", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2R4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2R4" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9M2R4-1", "start_pos": "528", "end_pos": "528", "site_lbl": "Ser528", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M2R4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M2R4" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9LJY0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 679, "chemical_mass": 76102.0, "gene_names": "PRK4;MAL21.21;PRK4;PRKA;pollen receptor like kinase 4", "protein_name": "Pollen receptor-like kinase 4", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" } ], "biological_process": [ { "name": "regulation of pollen tube growth", "id": "GO:0080092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080092", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "134", "end_pos": "134", "site_lbl": "Ser134", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LJY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LJY0" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "340", "end_pos": "340", "site_lbl": "Thr340", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LJY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LJY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "341", "end_pos": "341", "site_lbl": "Ser341", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LJY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LJY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "342", "end_pos": "342", "site_lbl": "Tyr342", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LJY0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LJY0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "374", "end_pos": "374", "site_lbl": "Ser374", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "452", "end_pos": "452", "site_lbl": "Ser452", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Ser455", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "472", "end_pos": "472", "site_lbl": "Thr472", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] }, { "uniprot_canonical_ac": "Q9LJY0-1", "start_pos": "542", "end_pos": "542", "site_lbl": "Tyr542", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LJY0", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8LPN7-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 328, "chemical_mass": 35705.0, "gene_names": "BTL08;MPN9.19", "protein_name": "E3 ubiquitin-protein ligase RING1-like", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "pmid": "" } ], "biological_process": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q8LPN7", "url": "https://www.uniprot.org/uniprotkb/Q8LPN7" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8LPN7-1", "start_pos": "274", "end_pos": "274", "site_lbl": "Ser274", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8LPN7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPN7" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "Q8LPN7-1", "start_pos": "277", "end_pos": "277", "site_lbl": "Ser277", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8LPN7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPN7" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q8LPN7-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Thr289", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8LPN7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPN7" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "Q8LPN7-1", "start_pos": "2", "end_pos": "2", "site_lbl": "Ser2", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8LPN7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPN7" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "Q8LPN7-1", "start_pos": "7", "end_pos": "7", "site_lbl": "Ser7", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8LPN7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPN7" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q3EBC8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1388, "chemical_mass": 156865.0, "gene_names": "DCL2;ATDCL2;DICER-LIKE 2;T17B22.1;T17B22.28;dicer-like 2", "protein_name": "Endoribonuclease Dicer homolog 2", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "ribonuclease III activity", "id": "GO:0004525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004525", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "cytoplasmic ribonucleoprotein granule", "id": "GO:0036464", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036464", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to virus", "id": "GO:0051607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051607", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "siRNA processing", "id": "GO:0030422", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030422", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "cellular response to nitrogen starvation", "id": "GO:0006995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006995", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "negative regulation of gene expression via chromosomal CpG island methylation", "id": "GO:0044027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044027", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "ta-siRNA processing", "id": "GO:0010267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010267", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "RNAi-mediated antiviral immunity against RNA virus", "id": "GO:0051214", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051214", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "siRNA-mediated gene silencing by inhibition of translation", "id": "GO:0070549", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070549", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" }, { "name": "regulatory ncRNA-mediated gene silencing", "id": "GO:0031047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031047", "evidence": [ { "database": "UniProtKB", "id": "Q3EBC8", "url": "https://www.uniprot.org/uniprotkb/Q3EBC8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Thr235", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 235, "start_aa": "Thr", "end_pos": 235, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr235", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "1151", "end_pos": "1151", "site_lbl": "Tyr1151", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "1154", "end_pos": "1154", "site_lbl": "Ser1154", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "1158", "end_pos": "1158", "site_lbl": "Tyr1158", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "1159", "end_pos": "1159", "site_lbl": "Ser1159", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "1361", "end_pos": "1361", "site_lbl": "Thr1361", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "268", "end_pos": "268", "site_lbl": "Ser268", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "271", "end_pos": "271", "site_lbl": "Thr271", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "Q3EBC8-1", "start_pos": "281", "end_pos": "281", "site_lbl": "Ser281", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q3EBC8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q3EBC8" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q94C11-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 443, "chemical_mass": 48693.0, "gene_names": "F4F15.230", "protein_name": "SURP and G-patch domain-containing protein 1-like protein", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "Q94C11", "url": "https://www.uniprot.org/uniprotkb/Q94C11" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9S7I6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1151, "chemical_mass": 125230.0, "gene_names": "RPK2;CLI1;F14P3.22;F1C9.8;F1C9_8;RPK2;TOAD2;TOADSTOOL 2;clv3 peptide insensitive 1;receptor-like protein kinase 2", "protein_name": "LRR receptor-like serine/threonine-protein kinase RPK2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" } ], "biological_process": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "lignin metabolic process", "id": "GO:0009808", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009808", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "pollen germination", "id": "GO:0009846", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009846", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "meristem maintenance", "id": "GO:0010073", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010073", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "pollen maturation", "id": "GO:0010152", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010152", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "longitudinal axis specification", "id": "GO:0009942", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009942", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "radial axis specification", "id": "GO:0009945", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009945", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" }, { "name": "embryonic meristem development", "id": "GO:0048508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048508", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "214", "end_pos": "214", "site_lbl": "Asn214", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 214, "start_aa": "Asn", "end_pos": 214, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn214", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "229", "end_pos": "229", "site_lbl": "Asn229", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 229, "start_aa": "Asn", "end_pos": 229, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn229", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "332", "end_pos": "332", "site_lbl": "Asn332", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 332, "start_aa": "Asn", "end_pos": 332, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn332", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "481", "end_pos": "481", "site_lbl": "Asn481", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 481, "start_aa": "Asn", "end_pos": 481, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn481", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "540", "end_pos": "540", "site_lbl": "Asn540", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 540, "start_aa": "Asn", "end_pos": 540, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn540", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "591", "end_pos": "591", "site_lbl": "Asn591", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 591, "start_aa": "Asn", "end_pos": 591, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn591", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "640", "end_pos": "640", "site_lbl": "Asn640", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 640, "start_aa": "Asn", "end_pos": 640, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn640", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "670", "end_pos": "670", "site_lbl": "Asn670", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 670, "start_aa": "Asn", "end_pos": 670, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn670", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "708", "end_pos": "708", "site_lbl": "Asn708", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 708, "start_aa": "Asn", "end_pos": 708, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn708", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "718", "end_pos": "718", "site_lbl": "Asn718", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 718, "start_aa": "Asn", "end_pos": 718, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn718", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "734", "end_pos": "734", "site_lbl": "Asn734", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 734, "start_aa": "Asn", "end_pos": 734, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn734", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "739", "end_pos": "739", "site_lbl": "Asn739", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 739, "start_aa": "Asn", "end_pos": 739, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn739", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "92", "end_pos": "92", "site_lbl": "Asn92", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 92, "start_aa": "Asn", "end_pos": 92, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn92", "evidence": [ { "id": "Q9S7I6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "1038", "end_pos": "1038", "site_lbl": "Tyr1038", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "1046", "end_pos": "1046", "site_lbl": "Thr1046", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "863", "end_pos": "863", "site_lbl": "Thr863", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "871", "end_pos": "871", "site_lbl": "Thr871", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "947", "end_pos": "947", "site_lbl": "Tyr947", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] }, { "uniprot_canonical_ac": "Q9S7I6-1", "start_pos": "983", "end_pos": "983", "site_lbl": "Tyr983", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9S7I6", "url": "https://www.uniprot.org/uniprotkb/Q9S7I6" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9C5W9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 602, "chemical_mass": 67662.0, "gene_names": "ARF18;ARF18;F15G16.220;F21F14.12;auxin response factor 18", "protein_name": "Auxin response factor 18", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q9C5W9", "url": "https://www.uniprot.org/uniprotkb/Q9C5W9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9C5W9-1", "start_pos": "475", "end_pos": "475", "site_lbl": "Thr475", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 475, "start_aa": "Thr", "end_pos": 475, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr475", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q9C5W9-1", "start_pos": "568", "end_pos": "568", "site_lbl": "Tyr568", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5W9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5W9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q6X7J9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 251, "chemical_mass": 28675.0, "gene_names": "WOX4;F2G19.11;F2G19_11;WOX4;WUSCHEL related homeobox 4", "protein_name": "WUSCHEL-related homeobox 4", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "tissue development", "id": "GO:0009888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009888", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "phloem or xylem histogenesis", "id": "GO:0010087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010087", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" }, { "name": "procambium histogenesis", "id": "GO:0010067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010067", "evidence": [ { "database": "UniProtKB", "id": "Q6X7J9", "url": "https://www.uniprot.org/uniprotkb/Q6X7J9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P35631-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 256, "chemical_mass": 30182.0, "gene_names": "AP1;AGAMOUS-like 7;AGL7;AP1;APETALA1;AtAP1;F4N2.9;F4N2_9;FLORAL HOMEOTIC PROTEIN APETALA1", "protein_name": "Floral homeotic protein APETALA 1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "meristem structural organization", "id": "GO:0009933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009933", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" }, { "name": "floral meristem determinacy", "id": "GO:0010582", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010582", "evidence": [ { "database": "UniProtKB", "id": "P35631", "url": "https://www.uniprot.org/uniprotkb/P35631" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9C7T4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 320, "chemical_mass": 35972.0, "gene_names": "BHLH096;BHLH96;EN15;T9N14.4;T9N14_4;bHLH096;bHLH96", "protein_name": "Transcription factor bHLH96", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q9C7T4", "url": "https://www.uniprot.org/uniprotkb/Q9C7T4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZRF9-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 540, "chemical_mass": 59742.0, "gene_names": "RPK1;AtRPK1;F23O10.15;F4N2.23;F4N2.27;F4N2_23;F4N2_27;RECEPTOR-LIKE PROTEIN KINASE 1;RPK1;TOAD1;receptor-like protein kinase 1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase RPK1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" } ], "biological_process": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "longitudinal axis specification", "id": "GO:0009942", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009942", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "radial axis specification", "id": "GO:0009945", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009945", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" }, { "name": "embryonic meristem development", "id": "GO:0048508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048508", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Thr250", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Thr258", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "334", "end_pos": "334", "site_lbl": "Tyr334", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "372", "end_pos": "372", "site_lbl": "Tyr372", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "427", "end_pos": "427", "site_lbl": "Tyr427", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRF9-1", "start_pos": "435", "end_pos": "435", "site_lbl": "Thr435", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRF9", "url": "https://www.uniprot.org/uniprotkb/Q9ZRF9" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q6R0A6-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 294, "chemical_mass": 33780.0, "gene_names": "MYB63;ATMYB63;MYB DOMAIN PROTEIN 63;MYB63;YUP8H12R.21;YUP8H12R_21;myb domain protein 63", "protein_name": "Transcription factor MYB63", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "response to UV", "id": "GO:0009411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009411", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "lignin biosynthetic process", "id": "GO:0009809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009809", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "regulation of secondary cell wall biogenesis", "id": "GO:2000652", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000652", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "Q6R0A6", "url": "https://www.uniprot.org/uniprotkb/Q6R0A6" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O04492-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 419, "chemical_mass": 45547.0, "gene_names": "DRB1;HYL1;AtDRB1;DRB1;DSRNA-BINDING PROTEIN 1;F21M12.9;F21M12_9;HYL1;HYPONASTIC LEAVES 1", "protein_name": "Double-stranded RNA-binding protein 1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "nuclear dicing body", "id": "GO:0010445", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010445", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" } ], "biological_process": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "pre-miRNA processing", "id": "GO:0031054", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031054", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "miRNA processing", "id": "GO:0035196", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035196", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "miRNA-mediated gene silencing by mRNA destabilization", "id": "GO:0035279", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035279", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "regulation of cell fate specification", "id": "GO:0042659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042659", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "response to cytokinin", "id": "GO:0009735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009735", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "ta-siRNA processing", "id": "GO:0010267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010267", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "leaf vascular tissue pattern formation", "id": "GO:0010305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010305", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "leaf proximal/distal pattern formation", "id": "GO:0010589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010589", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "miRNA binding", "id": "GO:0035198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035198", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" }, { "name": "ribonuclease III activity", "id": "GO:0004525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004525", "evidence": [ { "database": "UniProtKB", "id": "O04492", "url": "https://www.uniprot.org/uniprotkb/O04492" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O04492-1", "start_pos": "31", "end_pos": "31", "site_lbl": "Thr31", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O04492", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O04492" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8RY71-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 341, "chemical_mass": 37008.0, "gene_names": "ESP;EPITHIOSPECIFYING SENESCENCE REGULATOR;ESP;ESR;F15I1.12;F15I1_12;TASTY;epithiospecifier protein", "protein_name": "N-(sulfonatooxy)alkenimidothioic acid sulfate-lyase (epithionitrile-forming)", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "enzyme regulator activity", "id": "GO:0030234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030234", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "lyase activity", "id": "GO:0016829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016829", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "response to jasmonic acid", "id": "GO:0009753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009753", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "leaf senescence", "id": "GO:0010150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010150", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "glucosinolate catabolic process", "id": "GO:0019762", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019762", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" }, { "name": "nitrile biosynthetic process", "id": "GO:0080028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080028", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "130", "end_pos": "130", "site_lbl": "Phe130", "weight": 0.0, "mutagenesis": [ { "sequence_org": "F", "sequence_mut": "A", "comment": "Lost activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "186", "end_pos": "186", "site_lbl": "Gly186", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "M", "comment": "Strongly reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Lys211", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Increased ability to hydrolyze benzylglucosinolate but normal activity when allylglucosinolate is used as substrate in the presence of myrosinase. Increased ability to hydrolyze benzylglucosinolate but slightly reduced activity when allylglucosinolate is used as substrate in the presence of myrosinase; when associated with A-94. Strongly reduced activity; when associated with A-46 and A-94.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Val244", "weight": 0.0, "mutagenesis": [ { "sequence_org": "V", "sequence_mut": "C", "comment": "Strongly reduced activity upon benzylglucosinolate but slightly reduced activity when allylglucosinolate is used as substrate in the presence of myrosinase.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "260", "end_pos": "260", "site_lbl": "Glu260", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "Lost activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] }, { "sequence_org": "E", "sequence_mut": "Q", "comment": "Lost activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "264", "end_pos": "264", "site_lbl": "Asp264", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Strongly reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] }, { "sequence_org": "D", "sequence_mut": "N", "comment": "Lost activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "300", "end_pos": "300", "site_lbl": "Pro300", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "N", "comment": "Strongly reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "301", "end_pos": "301", "site_lbl": "Arg301", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "L", "comment": "Strongly reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "45", "end_pos": "45", "site_lbl": "Asn45", "weight": 0.0, "mutagenesis": [ { "sequence_org": "N", "sequence_mut": "Y", "comment": "Strongly reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "46", "end_pos": "46", "site_lbl": "Lys46", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "A", "comment": "Reduced activity. Strongly reduced activity; when associated with A-94. Reduced activity; when associated with A-94 and A-211.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] }, { "uniprot_canonical_ac": "Q8RY71-1", "start_pos": "94", "end_pos": "94", "site_lbl": "Arg94", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "A", "comment": "Strongly increased ability to hydrolyze benzylglucosinolate but slightly enhanced activity when allylglucosinolate is used as substrate in the presence of myrosinase. Increased ability to hydrolyze benzylglucosinolate but slightly reduced activity when allylglucosinolate is used as substrate in the presence of myrosinase; when associated with A-211. Reduced activity; when associated with A-46. Strongly reduced activity; when associated with A-46 and A-211.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] }, { "sequence_org": "R", "sequence_mut": "K", "comment": "Reduced activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8RY71", "url": "https://www.uniprot.org/uniprotkb/Q8RY71" }, { "database": "PubMed", "id": "23999604", "url": "https://glygen.org/publication/PubMed/23999604" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8RWZ1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 768, "chemical_mass": 84460.0, "gene_names": "SUB;AT1G11140;SCM;SCRAMBLED;SRF9;STRUBBELIG-RECEPTOR FAMILY 9;STRUBBELIG;SUB;T19D16.1;T19D16.8;T28P6.18", "protein_name": "Protein STRUBBELIG", "disease": [], "biological_process": [ { "name": "tissue morphogenesis", "id": "GO:0048729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048729", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "regulation of cell population proliferation", "id": "GO:0042127", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042127", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "cell morphogenesis", "id": "GO:0000902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000902", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "root meristem specification", "id": "GO:0010071", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010071", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "leaf vascular tissue pattern formation", "id": "GO:0010305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010305", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "plasmodesmata-mediated intercellular transport", "id": "GO:0010497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010497", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "leaf development", "id": "GO:0048366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048366", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "shoot system development", "id": "GO:0048367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048367", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "floral organ development", "id": "GO:0048437", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048437", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "plant ovule development", "id": "GO:0048481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048481", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "positive regulation of atrichoblast fate specification", "id": "GO:0010059", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010059", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "positive regulation of trichoblast fate specification", "id": "GO:0010063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010063", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "119", "end_pos": "119", "site_lbl": "Asn119", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 119, "start_aa": "Asn", "end_pos": 119, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn119", "evidence": [ { "id": "Q8RWZ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "243", "end_pos": "243", "site_lbl": "Asn243", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 243, "start_aa": "Asn", "end_pos": 243, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn243", "evidence": [ { "id": "Q8RWZ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "395", "end_pos": "395", "site_lbl": "Thr395", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 395, "start_aa": "Thr", "end_pos": 395, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr395", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "397", "end_pos": "397", "site_lbl": "Thr397", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 397, "start_aa": "Thr", "end_pos": 397, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr397", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "70", "end_pos": "70", "site_lbl": "Asn70", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 70, "start_aa": "Asn", "end_pos": 70, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn70", "evidence": [ { "id": "Q8RWZ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Thr447", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8RWZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8RWZ1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Ser466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8RWZ1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8RWZ1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "L", "comment": "In sub-17; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "222", "end_pos": "222", "site_lbl": "Ser222", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "L", "comment": "In sub-12; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Pro258", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In sub-13; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "272", "end_pos": "272", "site_lbl": "Pro272", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "S", "comment": "In sub-14; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "304", "end_pos": "304", "site_lbl": "Pro304", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In sub-15; loss of function.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "357", "end_pos": "357", "site_lbl": "Gly357", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "S", "comment": "In sub-16; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "473", "end_pos": "473", "site_lbl": "Pro473", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "L", "comment": "In sub-18; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "506", "end_pos": "506", "site_lbl": "Gly506", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "A", "comment": "No phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "15951420", "url": "https://glygen.org/publication/PubMed/15951420" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "525", "end_pos": "525", "site_lbl": "Lys525", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "No phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "15951420", "url": "https://glygen.org/publication/PubMed/15951420" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "539", "end_pos": "539", "site_lbl": "Glu539", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "No phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "15951420", "url": "https://glygen.org/publication/PubMed/15951420" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "545", "end_pos": "545", "site_lbl": "Ser545", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "F", "comment": "In sub-19; loss of function.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Cys57", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "In sub-10; loss of function. Loss of function; when associated with Y-66.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "599", "end_pos": "599", "site_lbl": "Arg599", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "C", "comment": "In sub-4; loss of function.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" }, { "database": "PubMed", "id": "15951420", "url": "https://glygen.org/publication/PubMed/15951420" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "633", "end_pos": "633", "site_lbl": "Leu633", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "F", "comment": "In sub-20; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Val64", "weight": 0.0, "mutagenesis": [ { "sequence_org": "V", "sequence_mut": "M", "comment": "In sub-3; loss of function.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" }, { "database": "PubMed", "id": "15951420", "url": "https://glygen.org/publication/PubMed/15951420" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Cys66", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "Loss of function. Loss of function; when associated with Y-57.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] }, { "uniprot_canonical_ac": "Q8RWZ1-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Ser69", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "L", "comment": "In sub-11; no phenotypic effect.", "evidence": [ { "database": "UniProtKB", "id": "Q8RWZ1", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ1" }, { "database": "PubMed", "id": "21603601", "url": "https://glygen.org/publication/PubMed/21603601" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q38822-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 189, "chemical_mass": 21520.0, "gene_names": "IAA3;SHY2;F19P19.32;F19P19_32;IAA3;SHORT HYPOCOTYL 2;SHY2;indole-3-acetic acid inducible 3", "protein_name": "Auxin-responsive protein IAA3", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q38822-1", "start_pos": "117", "end_pos": "117", "site_lbl": "Ser117", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q38822", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q38822" } ] } ] }, { "uniprot_canonical_ac": "Q38822-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Gly67", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In shy2-3; gain of function. Affects auxin-related developmental processes. Affects photomorphogenesis.", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" }, { "database": "PubMed", "id": "9895319", "url": "https://glygen.org/publication/PubMed/9895319" } ] } ] }, { "uniprot_canonical_ac": "Q38822-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Pro69", "weight": 0.0, "mutagenesis": [ { "sequence_org": "P", "sequence_mut": "S", "comment": "In shy2-2; gain of function. Affects auxin-related developmental processes. Affects photomorphogenesis.", "evidence": [ { "database": "UniProtKB", "id": "Q38822", "url": "https://www.uniprot.org/uniprotkb/Q38822" }, { "database": "PubMed", "id": "9895319", "url": "https://glygen.org/publication/PubMed/9895319" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q94JL3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 393, "chemical_mass": 43041.0, "gene_names": "ATBHLH112;BHLH112;EN64;T13M11.1;T13M11_1", "protein_name": "Transcription factor bHLH112", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "regulation of reactive oxygen species metabolic process", "id": "GO:2000377", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000377", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "cellular response to water deprivation", "id": "GO:0042631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042631", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "cellular response to salt stress", "id": "GO:0071472", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071472", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "cellular response to abscisic acid stimulus", "id": "GO:0071215", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071215", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" }, { "name": "regulation of L-proline metabolic process", "id": "GO:2000214", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000214", "evidence": [ { "database": "UniProtKB", "id": "Q94JL3", "url": "https://www.uniprot.org/uniprotkb/Q94JL3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P14712-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1122, "chemical_mass": 124501.0, "gene_names": "PHYA;ELONGATED HYPOCOTYL 8;F14J9.23;F14J9_23;FAR RED ELONGATED 1;FAR RED ELONGATED HYPOCOTYL 2;FHY2;FRE1;HY8;PHYA;phytochrome A", "protein_name": "Phytochrome A", "disease": [], "biological_process": [ { "name": "response to arsenic-containing substance", "id": "GO:0046685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046685", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "detection of visible light", "id": "GO:0009584", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009584", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "negative regulation of translation", "id": "GO:0017148", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017148", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "response to light stimulus", "id": "GO:0009416", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009416", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "gravitropism", "id": "GO:0009630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009630", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "phototropism", "id": "GO:0009638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009638", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "response to continuous far red light stimulus by the high-irradiance response system", "id": "GO:0010201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010201", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "response to far red light", "id": "GO:0010218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010218", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "red light signaling pathway", "id": "GO:0010161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010161", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "response to very low fluence red light stimulus", "id": "GO:0010203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010203", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "protein-tetrapyrrole linkage", "id": "GO:0017006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017006", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "red, far-red light phototransduction", "id": "GO:0009585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009585", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" } ], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "phosphorelay sensor kinase activity", "id": "GO:0000155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000155", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "red or far-red light photoreceptor activity", "id": "GO:0009883", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009883", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "far-red light photoreceptor activity", "id": "GO:0031516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031516", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "photoreceptor activity", "id": "GO:0009881", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009881", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P14712-1", "start_pos": "242", "end_pos": "242", "site_lbl": "Tyr242", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "H", "comment": "Constitutively active in the Pfr form, leading to a constitutively photomorphogenic (cop) phenotype and reduced accumulation in the nucleus.", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" }, { "database": "PubMed", "id": "21884939", "url": "https://glygen.org/publication/PubMed/21884939" } ] } ] }, { "uniprot_canonical_ac": "P14712-1", "start_pos": "30", "end_pos": "30", "site_lbl": "Ala30", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "V", "comment": "In phyA-5; reduced binding to FHY1 and FHL leading to a reduced nuclear import under low fluences of far-red light (FR) light. Hyposensitivity to continuous low-intensity FR, and reduced very-low-fluence response and high-irradiance response.", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" }, { "database": "PubMed", "id": "21969386", "url": "https://glygen.org/publication/PubMed/21969386" } ] } ] }, { "uniprot_canonical_ac": "P14712-1", "start_pos": "323", "end_pos": "323", "site_lbl": "Cys323", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Unable to bind the chromophore and cannot be converted to Pfr, fails to accumulate in the nucleus and to interact with FHY1.", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" }, { "database": "PubMed", "id": "21884939", "url": "https://glygen.org/publication/PubMed/21884939" } ] } ] }, { "uniprot_canonical_ac": "P14712-1", "start_pos": "727", "end_pos": "727", "site_lbl": "Gly727", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In HY8-3; no regulatory activity.", "evidence": [ { "database": "UniProtKB", "id": "P14712", "url": "https://www.uniprot.org/uniprotkb/P14712" }, { "database": "PubMed", "id": "8400877", "url": "https://glygen.org/publication/PubMed/8400877" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9C5X0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 185, "chemical_mass": 21405.0, "gene_names": "IAA34;IAA34;T15D22.10;T15D22_10;indole-3-acetic acid inducible 34", "protein_name": "Auxin-responsive protein IAA34", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9C5X0", "url": "https://www.uniprot.org/uniprotkb/Q9C5X0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22040-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 666, "chemical_mass": 73470.0, "gene_names": "ANP1;NP1;ANP1;F7G19.13;F7G19_13;MAP KINASE KINASE KINASE 1;MAPKKK1;NP1;NPK1-related protein kinase 1", "protein_name": "Mitogen-activated protein kinase kinase kinase ANP1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "MAP kinase kinase kinase activity", "id": "GO:0004709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004709", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22040-1", "start_pos": "98", "end_pos": "98", "site_lbl": "Lys98", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "M", "comment": "Loss of kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "O22040", "url": "https://www.uniprot.org/uniprotkb/O22040" }, { "database": "PubMed", "id": "10717008", "url": "https://glygen.org/publication/PubMed/10717008" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q17TI5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 344, "chemical_mass": 38761.0, "gene_names": "BRX;1;BREVIS RADIX;BRX;F5M6.11;F5M6_11;NIP3:1;NIP3;NLM9;NOD26-like intrinsic protein 3", "protein_name": "Protein BREVIS RADIX", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" } ], "biological_process": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "cytokinin-activated signaling pathway", "id": "GO:0009736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009736", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "maintenance of root meristem identity", "id": "GO:0010078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010078", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "phloem development", "id": "GO:0010088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010088", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "auxin export across the plasma membrane", "id": "GO:0010315", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010315", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" }, { "name": "sieve cell differentiation", "id": "GO:0048756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048756", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q17TI5", "url": "https://www.uniprot.org/uniprotkb/Q17TI5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q17TI5-1", "start_pos": "93", "end_pos": "93", "site_lbl": "Thr93", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 93, "start_aa": "Thr", "end_pos": 93, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr93", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22152-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 229, "chemical_mass": 25779.0, "gene_names": "AFO;YAB1;ABNORMAL FLORAL ORGANS PROTEIN;ABNORMAL FLORAL ORGANS;AFO;AT;F4L23.30;FILAMENTOUS FLOWER;FIL;YAB1;YABBY1", "protein_name": "Axial regulator YABBY 1", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" } ], "biological_process": [ { "name": "cell fate commitment", "id": "GO:0045165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045165", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "meristem structural organization", "id": "GO:0009933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009933", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "polarity specification of adaxial/abaxial axis", "id": "GO:0009944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009944", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "specification of floral organ identity", "id": "GO:0010093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010093", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "fruit development", "id": "GO:0010154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010154", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "abaxial cell fate specification", "id": "GO:0010158", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010158", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "inflorescence meristem growth", "id": "GO:0010450", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010450", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "regulation of shoot apical meristem development", "id": "GO:1902183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902183", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "regulation of leaf development", "id": "GO:2000024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000024", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" }, { "name": "specification of plant organ position", "id": "GO:0090706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090706", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22152-1", "start_pos": "178", "end_pos": "178", "site_lbl": "Asn178", "weight": 0.0, "mutagenesis": [ { "sequence_org": "N", "sequence_mut": "K", "comment": "In fil-4; abnormal abaxial determination during embryogenesis and organogenesis, filamentous flowers.", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" }, { "database": "PubMed", "id": "10457020", "url": "https://glygen.org/publication/PubMed/10457020" } ] } ] }, { "uniprot_canonical_ac": "O22152-1", "start_pos": "30", "end_pos": "30", "site_lbl": "Cys30", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "In fil-2; abnormal abaxial determination during embryogenesis and organogenesis, filamentous flowers.", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" }, { "database": "PubMed", "id": "10457020", "url": "https://glygen.org/publication/PubMed/10457020" }, { "database": "PubMed", "id": "10323860", "url": "https://glygen.org/publication/PubMed/10323860" } ] } ] }, { "uniprot_canonical_ac": "O22152-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Cys33", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "Y", "comment": "In fil-3; abnormal abaxial determination during embryogenesis and organogenesis, filamentous flowers.", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" }, { "database": "PubMed", "id": "10457020", "url": "https://glygen.org/publication/PubMed/10457020" } ] } ] }, { "uniprot_canonical_ac": "O22152-1", "start_pos": "56", "end_pos": "56", "site_lbl": "Cys56", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of zinc release and reduction of multimerization.", "evidence": [ { "database": "UniProtKB", "id": "O22152", "url": "https://www.uniprot.org/uniprotkb/O22152" }, { "database": "PubMed", "id": "11092895", "url": "https://glygen.org/publication/PubMed/11092895" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O80860-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 695, "chemical_mass": 74157.0, "gene_names": "FTSH2;VAR2;F7F1.16;F7F1_16;FTSH2;VAR2;VARIEGATED 2", "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "disease": [], "molecular_function": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "metallopeptidase activity", "id": "GO:0008237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008237", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "ATP-dependent peptidase activity", "id": "GO:0004176", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004176", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" } ], "cellular_component": [ { "name": "peroxisome", "id": "GO:0005777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005777", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "chloroplast thylakoid membrane", "id": "GO:0009535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009535", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "chloroplast thylakoid", "id": "GO:0009534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009534", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "thylakoid", "id": "GO:0009579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009579", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "chloroplast envelope", "id": "GO:0009941", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009941", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "thylakoid lumen", "id": "GO:0031977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031977", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" } ], "biological_process": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "reactive oxygen species metabolic process", "id": "GO:0072593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072593", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "protein catabolic process", "id": "GO:0030163", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030163", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "thylakoid membrane organization", "id": "GO:0010027", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010027", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "photosystem II repair", "id": "GO:0010206", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010206", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "photosystem I assembly", "id": "GO:0048564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048564", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "photoinhibition", "id": "GO:0010205", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010205", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" }, { "name": "PSII associated light-harvesting complex II catabolic process", "id": "GO:0010304", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010304", "evidence": [ { "database": "UniProtKB", "id": "O80860", "url": "https://www.uniprot.org/uniprotkb/O80860" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O80860-1", "start_pos": "691", "end_pos": "691", "site_lbl": "Thr691", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 691, "start_aa": "Thr", "end_pos": 691, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr691", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "14", "end_pos": "14", "site_lbl": "Ser14", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "17", "end_pos": "17", "site_lbl": "Thr17", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "212", "end_pos": "212", "site_lbl": "Ser212", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Thr337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "393", "end_pos": "393", "site_lbl": "Ser393", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "O80860-1", "start_pos": "5", "end_pos": "5", "site_lbl": "Ser5", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O80860", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O80860" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22218-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1030, "chemical_mass": 112749.0, "gene_names": "ACA4;''autoinhibited Ca(2+)-ATPase;ACA4;T32G6.8;T32G6_8;autoinhibited Ca(2+)-ATPase;isoform 4'';isoform 4", "protein_name": "Calcium-transporting ATPase 4, plasma membrane-type", "disease": [], "biological_process": [ { "name": "monoatomic anion homeostasis", "id": "GO:0055081", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055081", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "regulation of cytosolic calcium ion concentration", "id": "GO:0051480", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051480", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "negative regulation of programmed cell death", "id": "GO:0043069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043069", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "response to nematode", "id": "GO:0009624", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009624", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" } ], "molecular_function": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "P-type calcium transporter activity", "id": "GO:0005388", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005388", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "vacuolar membrane", "id": "GO:0005774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005774", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22218-1", "start_pos": "25", "end_pos": "25", "site_lbl": "Ser25", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22218", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22218" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "O22218-1", "start_pos": "26", "end_pos": "26", "site_lbl": "Ser26", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22218", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22218" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "O22218-1", "start_pos": "28", "end_pos": "28", "site_lbl": "Ser28", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "O22218", "url": "https://www.uniprot.org/uniprotkb/O22218" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "O22218", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22218" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8VY64-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 198, "chemical_mass": 22259.0, "gene_names": "NF-YA4;NFYA4;T29F13.7;T29F13_7;nuclear factor Y;subunit A4", "protein_name": "Nuclear transcription factor Y subunit A-4", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "CCAAT-binding factor complex", "id": "GO:0016602", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016602", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" }, { "name": "regulation of timing of transition from vegetative to reproductive phase", "id": "GO:0048510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048510", "evidence": [ { "database": "UniProtKB", "id": "Q8VY64", "url": "https://www.uniprot.org/uniprotkb/Q8VY64" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8VY64-1", "start_pos": "4", "end_pos": "4", "site_lbl": "Ser4", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8VY64", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8VY64" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q8VY64-1", "start_pos": "9", "end_pos": "9", "site_lbl": "Ser9", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8VY64", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8VY64" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22133-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 364, "chemical_mass": 40261.0, "gene_names": "BEN1;BEN1;BRI1-5 ENHANCED 1;F4L23.9", "protein_name": "Protein BRI1-5 ENHANCED 1", "disease": [], "biological_process": [ { "name": "brassinosteroid biosynthetic process", "id": "GO:0016132", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016132", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" }, { "name": "response to absence of light", "id": "GO:0009646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009646", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" }, { "name": "brassinosteroid metabolic process", "id": "GO:0016131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016131", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" }, { "name": "regulation of brassinosteroid biosynthetic process", "id": "GO:0010422", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010422", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" } ], "molecular_function": [ { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "O22133", "url": "https://www.uniprot.org/uniprotkb/O22133" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q0V7X4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 318, "chemical_mass": 35520.0, "gene_names": "FIT;ARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1;ATBHLH029;ATBHLH29;ATFIT1;BASIC HELIX-LOOP-HELIX PROTEIN 29;BHLH029;BHLH29;EN43;F24D13.5;F24D13_5;FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1;FER-like regulator of iron uptake;FIT1;FRU", "protein_name": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "response to iron ion", "id": "GO:0010039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010039", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" }, { "name": "regulation of iron ion transport", "id": "GO:0034756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034756", "evidence": [ { "database": "UniProtKB", "id": "Q0V7X4", "url": "https://www.uniprot.org/uniprotkb/Q0V7X4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P20649-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 949, "chemical_mass": 104224.0, "gene_names": "AHA1;HA1;AHA1;F19F24.16;F19F24_16;H(+)-ATPase 1;HA1;OPEN STOMATA 2;OST2;PLASMA MEMBRANE PROTON ATPASE;PMA", "protein_name": "ATPase 1, plasma membrane-type", "disease": [], "molecular_function": [ { "name": "P-type proton-exporting transporter activity", "id": "GO:0008553", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008553", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" } ], "cellular_component": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" } ], "biological_process": [ { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "regulation of intracellular pH", "id": "GO:0051453", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051453", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "proton transmembrane transport", "id": "GO:1902600", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902600", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "proton export across plasma membrane", "id": "GO:0120029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120029", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "regulation of stomatal movement", "id": "GO:0010119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010119", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" }, { "name": "stomatal opening", "id": "GO:1990069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990069", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P20649-1", "start_pos": "700", "end_pos": "700", "site_lbl": "Thr700", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 700, "start_aa": "Thr", "end_pos": 700, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr700", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "2", "end_pos": "2", "site_lbl": "Ser2", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "315", "end_pos": "315", "site_lbl": "Thr315", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "328", "end_pos": "328", "site_lbl": "Ser328", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "881", "end_pos": "881", "site_lbl": "Thr881", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "17586839", "url": "https://glygen.org/publication/PubMed/17586839" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "899", "end_pos": "899", "site_lbl": "Ser899", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" }, { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "900", "end_pos": "900", "site_lbl": "Tyr900", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "904", "end_pos": "904", "site_lbl": "Ser904", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "931", "end_pos": "931", "site_lbl": "Ser931", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" }, { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "942", "end_pos": "942", "site_lbl": "Thr942", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "947", "end_pos": "947", "site_lbl": "Tyr947", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "P20649-1", "start_pos": "948", "end_pos": "948", "site_lbl": "Thr948", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "P20649", "url": "https://www.uniprot.org/uniprotkb/P20649" }, { "database": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" }, { "database": "iPTMnet", "id": "P20649", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P20649" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "17586839", "url": "https://glygen.org/publication/PubMed/17586839" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "18686298", "url": "https://glygen.org/publication/PubMed/18686298" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "19688752", "url": "https://glygen.org/publication/PubMed/19688752" }, { "database": "PubMed", "id": "19900291", "url": "https://glygen.org/publication/PubMed/19900291" }, { "database": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "23820729", "url": "https://glygen.org/publication/PubMed/23820729" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q7XHI5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 362, "chemical_mass": 40060.0, "gene_names": "BHLH133;UKTF1;T2G17.10;T2G17_10", "protein_name": "Transcription factor bHLH133", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q7XHI5", "url": "https://www.uniprot.org/uniprotkb/Q7XHI5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q7XHI5-1", "start_pos": "272", "end_pos": "272", "site_lbl": "Thr272", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 272, "start_aa": "Thr", "end_pos": 272, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr272", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8LPS5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 601, "chemical_mass": 66981.0, "gene_names": "SERK5;ATSERK5;BAK8;BRI1- ASSOCIATED KINASE 8;F13J11.15;F13J11_15;SERK5;SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5;somatic embryogenesis receptor-like kinase 5", "protein_name": "Somatic embryogenesis receptor kinase 5", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" } ], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" } ], "biological_process": [ { "name": "protein phosphorylation", "id": "GO:0006468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006468", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" }, { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "105", "end_pos": "105", "site_lbl": "Asn105", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 105, "start_aa": "Asn", "end_pos": 105, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn105", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "129", "end_pos": "129", "site_lbl": "Asn129", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 129, "start_aa": "Asn", "end_pos": 129, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn129", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "151", "end_pos": "151", "site_lbl": "Asn151", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 151, "start_aa": "Asn", "end_pos": 151, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn151", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "184", "end_pos": "184", "site_lbl": "Asn184", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 184, "start_aa": "Asn", "end_pos": 184, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn184", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Asn52", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 52, "start_aa": "Asn", "end_pos": 52, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn52", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Thr57", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 57, "start_aa": "Thr", "end_pos": 57, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr57", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "81", "end_pos": "81", "site_lbl": "Asn81", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 81, "start_aa": "Asn", "end_pos": 81, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn81", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "272", "end_pos": "272", "site_lbl": "Thr272", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "298", "end_pos": "298", "site_lbl": "Thr298", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "356", "end_pos": "356", "site_lbl": "Ser356", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "359", "end_pos": "359", "site_lbl": "Ser359", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "435", "end_pos": "435", "site_lbl": "Thr435", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "436", "end_pos": "436", "site_lbl": "Thr436", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "441", "end_pos": "441", "site_lbl": "Thr441", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" }, { "database": "PubMed", "id": "19105183", "url": "https://glygen.org/publication/PubMed/19105183" }, { "database": "iPTMnet", "id": "Q8LPS5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "449", "end_pos": "449", "site_lbl": "Tyr449", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "451", "end_pos": "451", "site_lbl": "Ser451", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "452", "end_pos": "452", "site_lbl": "Thr452", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "456", "end_pos": "456", "site_lbl": "Ser456", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "506", "end_pos": "506", "site_lbl": "Ser506", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" }, { "database": "PubMed", "id": "19105183", "url": "https://glygen.org/publication/PubMed/19105183" }, { "database": "iPTMnet", "id": "Q8LPS5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8LPS5" } ] } ] }, { "uniprot_canonical_ac": "Q8LPS5-1", "start_pos": "532", "end_pos": "532", "site_lbl": "Thr532", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8LPS5", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22286-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 408, "chemical_mass": 44890.0, "gene_names": "BPM3;ATBPM3;BPM3;T5I7.6;T5I7_6", "protein_name": "BTB/POZ and MATH domain-containing protein 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" } ], "biological_process": [ { "name": "response to osmotic stress", "id": "GO:0006970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006970", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" }, { "name": "cellular response to salt stress", "id": "GO:0071472", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071472", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" }, { "name": "regulation of protein ubiquitination", "id": "GO:0031396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031396", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" } ], "molecular_function": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "O22286", "url": "https://www.uniprot.org/uniprotkb/O22286" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8L9Y3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 382, "chemical_mass": 43099.0, "gene_names": "ARR14;RR14;ARR14;RR14;T8O11.7;T8O11_7;response regulator 14", "protein_name": "Two-component response regulator ARR14", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "phosphorelay response regulator activity", "id": "GO:0000156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000156", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "cytokinin-activated signaling pathway", "id": "GO:0009736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009736", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" }, { "name": "phosphorelay signal transduction system", "id": "GO:0000160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000160", "evidence": [ { "database": "UniProtKB", "id": "Q8L9Y3", "url": "https://www.uniprot.org/uniprotkb/Q8L9Y3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22833-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 658, "chemical_mass": 73906.0, "gene_names": "LECRK-V4;LECRK54;F18O19.19;L-type lectin receptor kinase V.4;LECRKC1;LecRK-V.4", "protein_name": "L-type lectin-domain containing receptor kinase V.4", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response to bacterium", "id": "GO:0042742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042742", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" }, { "name": "defense response to oomycetes", "id": "GO:0002229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002229", "evidence": [ { "database": "UniProtKB", "id": "O22833", "url": "https://www.uniprot.org/uniprotkb/O22833" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22833-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Asn196", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 196, "start_aa": "Asn", "end_pos": 196, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn196", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22833-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Asn66", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 66, "start_aa": "Asn", "end_pos": 66, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn66", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833#ptm_processing" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O82312-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 800, "chemical_mass": 90968.0, "gene_names": "PAPS2;F17H15.12;F17H15_12;PAPS2;poly(A) polymerase 2", "protein_name": "Nuclear poly(A) polymerase 2", "disease": [], "molecular_function": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" }, { "name": "poly(A) RNA polymerase activity", "id": "GO:1990817", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990817", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" } ], "biological_process": [ { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" }, { "name": "RNA 3'-end processing", "id": "GO:0031123", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031123", "evidence": [ { "database": "UniProtKB", "id": "O82312", "url": "https://www.uniprot.org/uniprotkb/O82312" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O04196-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 783, "chemical_mass": 89481.0, "gene_names": "ISA1;ARABIDOPSIS THALIANA ISOAMYLASE 1;ATISA1;ISA1;RGV3;T28M21.9;T28M21_9;isoamylase 1", "protein_name": "Isoamylase 1, chloroplastic", "disease": [], "biological_process": [ { "name": "starch catabolic process", "id": "GO:0005983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005983", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" }, { "name": "amylopectin biosynthetic process", "id": "GO:0010021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010021", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" }, { "name": "starch biosynthetic process", "id": "GO:0019252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019252", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" }, { "name": "chloroplast isoamylase complex", "id": "GO:0010368", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010368", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" } ], "molecular_function": [ { "name": "isoamylase activity", "id": "GO:0019156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019156", "evidence": [ { "database": "UniProtKB", "id": "O04196", "url": "https://www.uniprot.org/uniprotkb/O04196" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q06BH3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 775, "chemical_mass": 84824.0, "gene_names": "SRF1;F5H14.18;F5H14_18;SRF1;STRUBBELIG-receptor family 1", "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q06BH3", "url": "https://www.uniprot.org/uniprotkb/Q06BH3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "133", "end_pos": "133", "site_lbl": "Asn133", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 133, "start_aa": "Asn", "end_pos": 133, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn133", "evidence": [ { "id": "Q06BH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06BH3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "181", "end_pos": "181", "site_lbl": "Asn181", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 181, "start_aa": "Asn", "end_pos": 181, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn181", "evidence": [ { "id": "Q06BH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06BH3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "192", "end_pos": "192", "site_lbl": "Asn192", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 192, "start_aa": "Asn", "end_pos": 192, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn192", "evidence": [ { "id": "Q06BH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06BH3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Asn250", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 250, "start_aa": "Asn", "end_pos": 250, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn250", "evidence": [ { "id": "Q06BH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06BH3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "266", "end_pos": "266", "site_lbl": "Thr266", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 266, "start_aa": "Thr", "end_pos": 266, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr266", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "279", "end_pos": "279", "site_lbl": "Asn279", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 279, "start_aa": "Asn", "end_pos": 279, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn279", "evidence": [ { "id": "Q06BH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06BH3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "302", "end_pos": "302", "site_lbl": "Thr302", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 302, "start_aa": "Thr", "end_pos": 302, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr302", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "378", "end_pos": "378", "site_lbl": "Thr378", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q06BH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q06BH3" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q06BH3-1", "start_pos": "765", "end_pos": "765", "site_lbl": "Ser765", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q06BH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q06BH3" }, { "database": "PubMed", "id": "17651370", "url": "https://glygen.org/publication/PubMed/17651370" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22213-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 575, "chemical_mass": 64924.0, "gene_names": "CKX1;ATCKX1;CKX1;CYTOKININ OXIDASE/DEHYDROGENASE 1;T32G6.3;T32G6_3;cytokinin oxidase/dehydrogenase 1", "protein_name": "Cytokinin dehydrogenase 1", "disease": [], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" } ], "molecular_function": [ { "name": "FAD binding", "id": "GO:0071949", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071949", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" }, { "name": "cytokinin dehydrogenase activity", "id": "GO:0019139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019139", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" } ], "biological_process": [ { "name": "cytokinin catabolic process", "id": "GO:0009823", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009823", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" }, { "name": "meristem development", "id": "GO:0048507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048507", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" }, { "name": "cytokinin metabolic process", "id": "GO:0009690", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009690", "evidence": [ { "database": "UniProtKB", "id": "O22213", "url": "https://www.uniprot.org/uniprotkb/O22213" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22213-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Asn115", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 115, "start_aa": "Asn", "end_pos": 115, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn115", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "14", "end_pos": "14", "site_lbl": "Asn14", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 14, "start_aa": "Asn", "end_pos": 14, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn14", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Asn303", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 303, "start_aa": "Asn", "end_pos": 303, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn303", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "318", "end_pos": "318", "site_lbl": "Asn318", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 318, "start_aa": "Asn", "end_pos": 318, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn318", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "38", "end_pos": "38", "site_lbl": "Asn38", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 38, "start_aa": "Asn", "end_pos": 38, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn38", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Asn437", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 437, "start_aa": "Asn", "end_pos": 437, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn437", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Asn467", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 467, "start_aa": "Asn", "end_pos": 467, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn467", "evidence": [ { "id": "O22213", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22213#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "O22213-1", "start_pos": "316", "end_pos": "316", "site_lbl": "Ser316", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22213", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22213" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22854-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 633, "chemical_mass": 70128.0, "gene_names": "ETFQO;ETFQO;T1O24.14;T1O24;electron-transfer flavoprotein:ubiquinone oxidoreductase", "protein_name": "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" } ], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "electron-transferring-flavoprotein dehydrogenase activity", "id": "GO:0004174", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004174", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" } ], "biological_process": [ { "name": "L-leucine catabolic process", "id": "GO:0006552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006552", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "electron transport chain", "id": "GO:0022900", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022900", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "alternative respiration", "id": "GO:0010230", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010230", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" }, { "name": "response to absence of light", "id": "GO:0009646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009646", "evidence": [ { "database": "UniProtKB", "id": "O22854", "url": "https://www.uniprot.org/uniprotkb/O22854" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P93831-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 902, "chemical_mass": 100370.0, "gene_names": "CLF;CLF;CURLY LEAF;F26B6.3;F26B6_3;ICU1;INCURVATA 1;PIF1;PIF2;SDG1;SET1;SETDOMAIN 1;SETDOMAIN GROUP 1", "protein_name": "Histone-lysine N-methyltransferase CLF", "disease": [], "molecular_function": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "single-stranded RNA binding", "id": "GO:0003727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003727", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "histone H3K27 methyltransferase activity", "id": "GO:0046976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046976", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "transcription corepressor binding", "id": "GO:0001222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001222", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "histone H3K27 trimethyltransferase activity", "id": "GO:0140951", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140951", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "PcG protein complex", "id": "GO:0031519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031519", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" } ], "biological_process": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "transcription initiation-coupled chromatin remodeling", "id": "GO:0045815", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045815", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "DNA-mediated transformation", "id": "GO:0009294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009294", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "response to abscisic acid", "id": "GO:0009737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009737", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "leaf morphogenesis", "id": "GO:0009965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009965", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "vernalization response", "id": "GO:0010048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010048", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "regulation of leaf senescence", "id": "GO:1900055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900055", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "callus formation", "id": "GO:1990110", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990110", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "epigenetic programming in the endosperm", "id": "GO:0141044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141044", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "regulation of developmental process", "id": "GO:0050793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050793", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P93831", "url": "https://www.uniprot.org/uniprotkb/P93831" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P93831-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Thr433", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P93831", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P93831" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "P93831-1", "start_pos": "438", "end_pos": "438", "site_lbl": "Ser438", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P93831", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P93831" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "P93831-1", "start_pos": "443", "end_pos": "443", "site_lbl": "Ser443", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P93831", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P93831" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "P93831-1", "start_pos": "447", "end_pos": "447", "site_lbl": "Ser447", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P93831", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P93831" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q0WVM4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 634, "chemical_mass": 69694.0, "gene_names": "CIK2;CLERK;CLERK;T29E15.15;T29E15_15", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 2", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "coreceptor activity", "id": "GO:0015026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015026", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "cellular response to peptide", "id": "GO:1901653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901653", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "phloem development", "id": "GO:0010088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010088", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "homeostasis of number of meristem cells", "id": "GO:0007639", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007639", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" }, { "name": "regulation of developmental growth", "id": "GO:0048638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048638", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "109", "end_pos": "109", "site_lbl": "Asn109", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 109, "start_aa": "Asn", "end_pos": 109, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn109", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "155", "end_pos": "155", "site_lbl": "Asn155", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 155, "start_aa": "Asn", "end_pos": 155, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn155", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "96", "end_pos": "96", "site_lbl": "Asn96", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 96, "start_aa": "Asn", "end_pos": 96, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn96", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "296", "end_pos": "296", "site_lbl": "Thr296", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Thr322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "380", "end_pos": "380", "site_lbl": "Ser380", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "383", "end_pos": "383", "site_lbl": "Ser383", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "395", "end_pos": "395", "site_lbl": "Thr395", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Thr455", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "456", "end_pos": "456", "site_lbl": "Thr456", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "461", "end_pos": "461", "site_lbl": "Thr461", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "469", "end_pos": "469", "site_lbl": "Tyr469", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "471", "end_pos": "471", "site_lbl": "Ser471", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "472", "end_pos": "472", "site_lbl": "Thr472", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "476", "end_pos": "476", "site_lbl": "Ser476", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "551", "end_pos": "551", "site_lbl": "Thr551", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_canonical_ac": "Q0WVM4-1", "start_pos": "480", "end_pos": "480", "site_lbl": "Asp480", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "N", "comment": "In clerk-1; strong resistance to root-active CLE peptides, including CLV3, CLE26 and CLE45, and mediating root growth inhibition.", "evidence": [ { "database": "UniProtKB", "id": "Q0WVM4", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" }, { "database": "PubMed", "id": "29789310", "url": "https://glygen.org/publication/PubMed/29789310" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22898-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 660, "chemical_mass": 74598.0, "gene_names": "LACS1;CER8;ECERIFERUM 8;LACS1;LONG-CHAIN ACYL-COA SYNTHASE 1;T8I13.8", "protein_name": "Long chain acyl-CoA synthetase 1", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "long-chain fatty acid-CoA ligase activity", "id": "GO:0004467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004467", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "very long-chain fatty acid-CoA ligase activity", "id": "GO:0031957", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031957", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" } ], "biological_process": [ { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "wax biosynthetic process", "id": "GO:0010025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010025", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" }, { "name": "cutin biosynthetic process", "id": "GO:0010143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010143", "evidence": [ { "database": "UniProtKB", "id": "O22898", "url": "https://www.uniprot.org/uniprotkb/O22898" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22898-1", "start_pos": "102", "end_pos": "102", "site_lbl": "Ser102", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22898", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22898" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "O22898-1", "start_pos": "453", "end_pos": "453", "site_lbl": "Ser453", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22898", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22898" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "O22898-1", "start_pos": "457", "end_pos": "457", "site_lbl": "Tyr457", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22898", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22898" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] } ] }, { "uniprot_canonical_ac": "O22898-1", "start_pos": "78", "end_pos": "78", "site_lbl": "Thr78", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22898", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22898" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] }, { "uniprot_canonical_ac": "O22898-1", "start_pos": "79", "end_pos": "79", "site_lbl": "Tyr79", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22898", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22898" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P43254-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 675, "chemical_mass": 76188.0, "gene_names": "COP1;ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1;ATCOP1;CONSTITUTIVE PHOTOMORPHOGENIC 1;COP1;DEETIOLATED MUTANT 340;DET340;EMB168;EMBRYO DEFECTIVE 168;FUS1;FUSCA 1;T21L14.11;T21L14_11", "protein_name": "E3 ubiquitin-protein ligase COP1", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "nuclear ubiquitin ligase complex", "id": "GO:0000152", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000152", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "entrainment of circadian clock", "id": "GO:0009649", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009649", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "response to UV-B", "id": "GO:0010224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010224", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "red, far-red light phototransduction", "id": "GO:0009585", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009585", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "shade avoidance", "id": "GO:0009641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009641", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "skotomorphogenesis", "id": "GO:0009647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009647", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "regulation of stomatal movement", "id": "GO:0010119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010119", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "photoperiodism, flowering", "id": "GO:0048573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048573", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "positive regulation of flavonoid biosynthetic process", "id": "GO:0009963", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009963", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "anthocyanin-containing compound metabolic process", "id": "GO:0046283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046283", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" } ], "molecular_function": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "P43254-1", "start_pos": "20", "end_pos": "20", "site_lbl": "Ser20", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "O64682-1", "kinase_gene_name": "PID", "evidence": [ { "database": "iPTMnet", "id": "P43254", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P43254" }, { "database": "PubMed", "id": "28584104", "url": "https://glygen.org/publication/PubMed/28584104" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "21", "end_pos": "21", "site_lbl": "Ser21", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P43254", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P43254" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "322", "end_pos": "322", "site_lbl": "Ser322", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P43254", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P43254" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "565", "end_pos": "565", "site_lbl": "Ser565", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "P43254", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P43254" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "422", "end_pos": "422", "site_lbl": "Lys422", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "5-fold increase in interaction with HY5, weak interaction with BBX24/STO and BBX25/STH, and at low light intensity shorter hypocotyl.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "11226162", "url": "https://glygen.org/publication/PubMed/11226162" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "465", "end_pos": "465", "site_lbl": "Arg465", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "E", "comment": "No interaction with BBX24/STO and BBX25/STH, and at low light intensity shorter hypocotyl.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "11226162", "url": "https://glygen.org/publication/PubMed/11226162" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "467", "end_pos": "467", "site_lbl": "Trp467", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "No interaction with HY5, BBX24/STO and BBX25/STH and at low light intensity shorter hypocotyl.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "11226162", "url": "https://glygen.org/publication/PubMed/11226162" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "524", "end_pos": "524", "site_lbl": "Gly524", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In COP1-9; no interaction with HY5, SPA1, BBX25/STH or BBX24/STO and lethal.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "52", "end_pos": "52", "site_lbl": "Cys52", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "S", "comment": "Abolishes LAF1 ubiquitination and degradation; when associated with S-55.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "12827204", "url": "https://glygen.org/publication/PubMed/12827204" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "550", "end_pos": "550", "site_lbl": "Lys550", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "E", "comment": "No interaction with HY5, BBX24/STO and BBX25/STH and at low light intensity shorter hypocotyl.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "11226162", "url": "https://glygen.org/publication/PubMed/11226162" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "55", "end_pos": "55", "site_lbl": "Cys55", "weight": 0.0, "mutagenesis": [ { "sequence_org": "C", "sequence_mut": "S", "comment": "Abolishes LAF1 ubiquitination and degradation; when associated with S-52.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "12827204", "url": "https://glygen.org/publication/PubMed/12827204" } ] } ] }, { "uniprot_canonical_ac": "P43254-1", "start_pos": "592", "end_pos": "592", "site_lbl": "Glu592", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "R", "comment": "Better interaction with HY5, BBX24/STO and BBX25/STH and slightly longer hypocotyls.", "evidence": [ { "database": "UniProtKB", "id": "P43254", "url": "https://www.uniprot.org/uniprotkb/P43254" }, { "database": "PubMed", "id": "11226162", "url": "https://glygen.org/publication/PubMed/11226162" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9ZQR3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 868, "chemical_mass": 97635.0, "gene_names": "T13P21.11;T13P21_11", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510", "disease": [], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Asn231", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 231, "start_aa": "Asn", "end_pos": 231, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn231", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "235", "end_pos": "235", "site_lbl": "Asn235", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 235, "start_aa": "Asn", "end_pos": 235, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn235", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "258", "end_pos": "258", "site_lbl": "Asn258", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 258, "start_aa": "Asn", "end_pos": 258, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn258", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "291", "end_pos": "291", "site_lbl": "Asn291", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 291, "start_aa": "Asn", "end_pos": 291, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn291", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "433", "end_pos": "433", "site_lbl": "Asn433", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 433, "start_aa": "Asn", "end_pos": 433, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn433", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "446", "end_pos": "446", "site_lbl": "Asn446", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 446, "start_aa": "Asn", "end_pos": 446, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn446", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "48", "end_pos": "48", "site_lbl": "Asn48", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 48, "start_aa": "Asn", "end_pos": 48, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn48", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "495", "end_pos": "495", "site_lbl": "Asn495", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 495, "start_aa": "Asn", "end_pos": 495, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn495", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Asn68", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 68, "start_aa": "Asn", "end_pos": 68, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn68", "evidence": [ { "id": "Q9ZQR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "635", "end_pos": "635", "site_lbl": "Tyr635", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "721", "end_pos": "721", "site_lbl": "Ser721", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "722", "end_pos": "722", "site_lbl": "Thr722", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "727", "end_pos": "727", "site_lbl": "Thr727", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ] } ] }, { "uniprot_canonical_ac": "Q9ZQR3-1", "start_pos": "735", "end_pos": "735", "site_lbl": "Tyr735", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQR3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQR3" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O04294-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 531, "chemical_mass": 58616.0, "gene_names": "IMPA3;MOS6;6;ATIMPALPHA3;IMPA-3;IMPORTIN ALPHA 3;IMPORTIN ALPHA ISOFORM 3;KAP2;MODIFIER OF SNC1;MOS6;T10M13.16;T10M13_16", "protein_name": "Importin subunit alpha-3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" }, { "name": "NLS-dependent protein nuclear import complex", "id": "GO:0042564", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042564", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" }, { "name": "NLS-bearing protein import into nucleus", "id": "GO:0006607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006607", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" }, { "name": "protein import into nucleus", "id": "GO:0006606", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" } ], "molecular_function": [ { "name": "nuclear localization sequence binding", "id": "GO:0008139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008139", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" }, { "name": "nuclear import signal receptor activity", "id": "GO:0061608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061608", "evidence": [ { "database": "UniProtKB", "id": "O04294", "url": "https://www.uniprot.org/uniprotkb/O04294" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q93VK8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 86, "chemical_mass": 9541.0, "gene_names": "GLV1;RGF6;CLE-like 6;CLEL 6;CLEL6;FCAALL;GLV1;GOLVEN 1;RGF6;root meristem growth factor 6", "protein_name": "Protein GOLVEN 1", "disease": [], "biological_process": [ { "name": "regulation of asymmetric cell division", "id": "GO:0009786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009786", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of protein localization", "id": "GO:0032880", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032880", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "positive gravitropism", "id": "GO:0009958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009958", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of auxin polar transport", "id": "GO:2000012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000012", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of lateral root development", "id": "GO:2000023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000023", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of root morphogenesis", "id": "GO:2000067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000067", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "regulation of root development", "id": "GO:2000280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000280", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "root system development", "id": "GO:0022622", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022622", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" } ], "cellular_component": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" } ], "molecular_function": [ { "name": "hormone activity", "id": "GO:0005179", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005179", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" }, { "name": "growth factor activity", "id": "GO:0008083", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008083", "evidence": [ { "database": "UniProtKB", "id": "Q93VK8", "url": "https://www.uniprot.org/uniprotkb/Q93VK8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P17839-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 252, "chemical_mass": 28723.0, "gene_names": "AG;AGAMOUS PROTEIN;AGAMOUS;AG;F13C5.130;F13C5_130", "protein_name": "Floral homeotic protein AGAMOUS", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "leaf development", "id": "GO:0048366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048366", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "carpel development", "id": "GO:0048440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048440", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "stamen development", "id": "GO:0048443", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048443", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" }, { "name": "maintenance of floral organ identity", "id": "GO:0048497", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048497", "evidence": [ { "database": "UniProtKB", "id": "P17839", "url": "https://www.uniprot.org/uniprotkb/P17839" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O22763-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 411, "chemical_mass": 45358.0, "gene_names": "BZIP10;BZO2H1;ATBZIP10;Arabidopsis thaliana basic leucine zipper 10;BZO2H1;T10P11.9", "protein_name": "Basic leucine zipper 10", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "nutrient reservoir activity", "id": "GO:0045735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045735", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "plant-type hypersensitive response", "id": "GO:0009626", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009626", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "positive regulation of seed maturation", "id": "GO:2000693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000693", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" }, { "name": "response to molecule of oomycetes origin", "id": "GO:0002240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002240", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O22763-1", "start_pos": "387", "end_pos": "387", "site_lbl": "Thr387", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 387, "start_aa": "Thr", "end_pos": 387, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr387", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "O22763-1", "start_pos": "115", "end_pos": "115", "site_lbl": "Ser115", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22763", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22763" }, { "database": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] } ] }, { "uniprot_canonical_ac": "O22763-1", "start_pos": "195", "end_pos": "195", "site_lbl": "Tyr195", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22763", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22763" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "O22763-1", "start_pos": "196", "end_pos": "196", "site_lbl": "Ser196", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "O22763", "url": "https://www.uniprot.org/uniprotkb/O22763" }, { "database": "iPTMnet", "id": "O22763", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22763" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "O22763-1", "start_pos": "284", "end_pos": "284", "site_lbl": "Thr284", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O22763", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O22763" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8GY55-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 315, "chemical_mass": 34849.0, "gene_names": "PPD2;TIFY4B;DL3400C;FCAALL.297;PEAPOD 2;PPD2;TIFY4B;dl3400c", "protein_name": "Protein TIFY 4B", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" } ], "biological_process": [ { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" }, { "name": "regulation of defense response", "id": "GO:0031347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031347", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" }, { "name": "leaf development", "id": "GO:0048366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048366", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" }, { "name": "regulation of leaf morphogenesis", "id": "GO:1901371", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901371", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" }, { "name": "regulation of jasmonic acid mediated signaling pathway", "id": "GO:2000022", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000022", "evidence": [ { "database": "UniProtKB", "id": "Q8GY55", "url": "https://www.uniprot.org/uniprotkb/Q8GY55" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "179", "end_pos": "179", "site_lbl": "Ser179", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] } ] }, { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "198", "end_pos": "198", "site_lbl": "Ser198", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] } ] }, { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "199", "end_pos": "199", "site_lbl": "Ser199", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] } ] }, { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "203", "end_pos": "203", "site_lbl": "Ser203", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] } ] }, { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "57", "end_pos": "57", "site_lbl": "Ser57", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" } ] } ] }, { "uniprot_canonical_ac": "Q8GY55-1", "start_pos": "68", "end_pos": "68", "site_lbl": "Ser68", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q8GY55", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q8GY55" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q38836-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 230, "chemical_mass": 26184.0, "gene_names": "AGL11;STK;AGAMOUS-like 11;AGL11;SEEDSTICK;STK;T5L19.90;T5L19_90", "protein_name": "Agamous-like MADS-box protein AGL11", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "cis-regulatory region sequence-specific DNA binding", "id": "GO:0000987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000987", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "stigma papilla", "id": "GO:0090397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090397", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "regulation of cell division", "id": "GO:0051302", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051302", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "seed coat development", "id": "GO:0010214", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010214", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "seed development", "id": "GO:0048316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048316", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "carpel development", "id": "GO:0048440", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048440", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "plant ovule development", "id": "GO:0048481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048481", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "plant-type cell wall organization or biogenesis", "id": "GO:0071669", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071669", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "regulation of double fertilization forming a zygote and endosperm", "id": "GO:0080155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080155", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "integument development", "id": "GO:0080060", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080060", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "post-embryonic development", "id": "GO:0009791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009791", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" }, { "name": "reproductive structure development", "id": "GO:0048608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048608", "evidence": [ { "database": "UniProtKB", "id": "Q38836", "url": "https://www.uniprot.org/uniprotkb/Q38836" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q38836-1", "start_pos": "186", "end_pos": "186", "site_lbl": "Ser186", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 186, "start_aa": "Ser", "end_pos": 186, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser186", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q38836", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q38836" } ] } ] }, { "uniprot_canonical_ac": "Q38836-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Ser188", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 188, "start_aa": "Ser", "end_pos": 188, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser188", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q38836", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q38836" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "O23078-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 927, "chemical_mass": 104155.0, "gene_names": "PLDBETA2;A_IG005I10.13;F5I10.13;PLDBETA2;phospholipase D beta 2", "protein_name": "Phospholipase D beta 2", "disease": [], "molecular_function": [ { "name": "phospholipase D activity", "id": "GO:0004630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004630", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" } ], "biological_process": [ { "name": "phospholipid catabolic process", "id": "GO:0009395", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009395", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "phosphatidylcholine metabolic process", "id": "GO:0046470", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046470", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" }, { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "O23078", "url": "https://www.uniprot.org/uniprotkb/O23078" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "O23078-1", "start_pos": "370", "end_pos": "370", "site_lbl": "Ser370", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23078", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23078" } ] } ] }, { "uniprot_canonical_ac": "O23078-1", "start_pos": "372", "end_pos": "372", "site_lbl": "Ser372", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "O23078", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O23078" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q946J8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 445, "chemical_mass": 48644.0, "gene_names": "LHP1;TFL2;AtLHP1;LHP1;LIKE HETEROCHROMATIN PROTEIN 1;MVA3.4;MVA3_4;TERMINAL FLOWER 2;TFL2;TU8", "protein_name": "Chromo domain-containing protein LHP1", "disease": [], "biological_process": [ { "name": "multidimensional cell growth", "id": "GO:0009825", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009825", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "response to sucrose", "id": "GO:0009744", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009744", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "heterochromatin formation", "id": "GO:0031507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031507", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "photoperiodism", "id": "GO:0009648", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009648", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "negative regulation of flower development", "id": "GO:0009910", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009910", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "shoot system morphogenesis", "id": "GO:0010016", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010016", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "vernalization response", "id": "GO:0010048", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010048", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "photoperiodism, flowering", "id": "GO:0048573", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048573", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "GTP cyclohydrolase II activity", "id": "GO:0003935", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003935", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "euchromatin", "id": "GO:0000791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000791", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "heterochromatin", "id": "GO:0000792", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000792", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q946J8-1", "start_pos": "189", "end_pos": "189", "site_lbl": "Ser189", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q946J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q946J8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q946J8-1", "start_pos": "35", "end_pos": "35", "site_lbl": "Ser35", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q946J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q946J8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q946J8-1", "start_pos": "42", "end_pos": "42", "site_lbl": "Ser42", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q946J8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q946J8" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q946J8-1", "start_pos": "132", "end_pos": "132", "site_lbl": "Trp132", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "G", "comment": "Loss of interaction with 'K-9' of H3 and loss of chromocenter localization and punctuated distribution inside the nucleus.", "evidence": [ { "database": "UniProtKB", "id": "Q946J8", "url": "https://www.uniprot.org/uniprotkb/Q946J8" }, { "database": "PubMed", "id": "16361394", "url": "https://glygen.org/publication/PubMed/16361394" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q6S7B0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 669, "chemical_mass": 74414.0, "gene_names": "TAF5;F21J6.5;F21J6;TAF5;TBP-associated factor 5", "protein_name": "Transcription initiation factor TFIID subunit 5", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "pmid": "" }, { "name": "transcription factor TFIID complex", "id": "GO:0005669", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005669", "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "pmid": "" }, { "name": "SAGA complex", "id": "GO:0000124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000124", "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "pmid": "" } ], "biological_process": [ { "name": "transcription initiation at RNA polymerase II promoter", "id": "GO:0006367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006367", "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q6S7B0", "url": "https://www.uniprot.org/uniprotkb/Q6S7B0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q6S7B0-1", "start_pos": "248", "end_pos": "248", "site_lbl": "Ser248", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q6S7B0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6S7B0" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q6S7B0-1", "start_pos": "250", "end_pos": "250", "site_lbl": "Ser250", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q6S7B0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6S7B0" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q6S7B0-1", "start_pos": "398", "end_pos": "398", "site_lbl": "Ser398", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q6S7B0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6S7B0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q6S7B0-1", "start_pos": "58", "end_pos": "58", "site_lbl": "Ser58", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q6S7B0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q6S7B0" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9XF67-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 491, "chemical_mass": 54711.0, "gene_names": "PDK1;PDPK1;3'-phosphoinositide-dependent protein kinase 1;3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1;ATPDK1;PDK1;T32M21.110;T32M21_110", "protein_name": "3-phosphoinositide-dependent protein kinase 1", "disease": [], "molecular_function": [ { "name": "protein kinase activity", "id": "GO:0004672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004672", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "protein kinase activator activity", "id": "GO:0030295", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030295", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "phosphatidylinositol binding", "id": "GO:0035091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035091", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "phosphatidic acid binding", "id": "GO:0070300", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070300", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "176", "end_pos": "176", "site_lbl": "Thr176", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "Q9XF67-1", "kinase_gene_name": "PDPK1", "evidence": [ { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ], "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Strongly reduces autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "177", "end_pos": "177", "site_lbl": "Ser177", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Reduces autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "211", "end_pos": "211", "site_lbl": "Thr211", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "Q9XF67-1", "kinase_gene_name": "PDPK1", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ], "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Strongly reduces autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "276", "end_pos": "276", "site_lbl": "Ser276", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "29", "end_pos": "29", "site_lbl": "Ser29", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "333", "end_pos": "333", "site_lbl": "Ser333", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Thr335", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "337", "end_pos": "337", "site_lbl": "Ser337", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "382", "end_pos": "382", "site_lbl": "Ser382", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" }, { "database": "iPTMnet", "id": "F4JWB0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4JWB0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" }, { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slightly reduces autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "385", "end_pos": "385", "site_lbl": "Ser385", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XF67", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XF67" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9XF67-1", "start_pos": "167", "end_pos": "167", "site_lbl": "Asp167", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Abolishes autophosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9XF67", "url": "https://www.uniprot.org/uniprotkb/Q9XF67" }, { "database": "PubMed", "id": "16125835", "url": "https://glygen.org/publication/PubMed/16125835" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "P48007-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 208, "chemical_mass": 24047.0, "gene_names": "PI;F5O24.130;F5O24_130;FLORAL HOMEOTIC PROTEIN PISTILLATA;PISTILLATA;PI", "protein_name": "Floral homeotic protein PISTILLATA", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" }, { "name": "specification of floral organ identity", "id": "GO:0010093", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010093", "evidence": [ { "database": "UniProtKB", "id": "P48007", "url": "https://www.uniprot.org/uniprotkb/P48007" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4KIX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 787, "chemical_mass": 88821.0, "gene_names": "JMJ13;MQD22.4;MQD22_4", "protein_name": "Lysine-specific demethylase JMJ13", "disease": [], "molecular_function": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "histone demethylase activity", "id": "GO:0032452", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032452", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "histone H3K27me2/H3K27me3 demethylase activity", "id": "GO:0071558", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071558", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "histone H3 demethylase activity", "id": "GO:0141052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141052", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" } ], "biological_process": [ { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "response to temperature stimulus", "id": "GO:0009266", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009266", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "long-day photoperiodism", "id": "GO:0048571", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048571", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "negative regulation of gene expression, epigenetic", "id": "GO:0045814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045814", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "negative regulation of short-day photoperiodism, flowering", "id": "GO:0048577", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048577", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "negative regulation of long-day photoperiodism, flowering", "id": "GO:0048579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048579", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" }, { "name": "epigenetic regulation of gene expression", "id": "GO:0040029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040029", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "91", "end_pos": "91", "site_lbl": "Thr91", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KIX0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KIX0" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "179", "end_pos": "179", "site_lbl": "Phe179", "weight": 0.0, "mutagenesis": [ { "sequence_org": "F", "sequence_mut": "N", "comment": "Strongly reduced demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] }, { "sequence_org": "F", "sequence_mut": "S", "comment": "Slightly reduced demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "236", "end_pos": "236", "site_lbl": "Asp236", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "282", "end_pos": "282", "site_lbl": "Tyr282", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Y", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "295", "end_pos": "295", "site_lbl": "Glu295", "weight": 0.0, "mutagenesis": [ { "sequence_org": "E", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "296", "end_pos": "296", "site_lbl": "Asp296", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "388", "end_pos": "388", "site_lbl": "His388", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] }, { "uniprot_canonical_ac": "F4KIX0-1", "start_pos": "402", "end_pos": "402", "site_lbl": "Asn402", "weight": 0.0, "mutagenesis": [ { "sequence_org": "N", "sequence_mut": "A", "comment": "Impaired demethylase activity.", "evidence": [ { "database": "UniProtKB", "id": "F4KIX0", "url": "https://www.uniprot.org/uniprotkb/F4KIX0" }, { "database": "PubMed", "id": "30899015", "url": "https://glygen.org/publication/PubMed/30899015" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9C5H5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 716, "chemical_mass": 79319.0, "gene_names": "MAPKKK5;MAP3KG;MAPKKK5;MUD21.11;MUD21_11;mitogen-activated protein kinase kinase kinase 5", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "disease": [], "biological_process": [ { "name": "pattern recognition receptor signaling pathway", "id": "GO:0002221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002221", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "MAPK cascade", "id": "GO:0000165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000165", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "protein autophosphorylation", "id": "GO:0046777", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046777", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "regulation of innate immune response", "id": "GO:0045088", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045088", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "regulation of defense response to bacterium", "id": "GO:1900424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900424", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "regulation of defense response to fungus", "id": "GO:1900150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900150", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "regulation of defense response by callose deposition", "id": "GO:2000071", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000071", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "MAP kinase kinase kinase activity", "id": "GO:0004709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004709", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "170", "end_pos": "170", "site_lbl": "Ser170", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "264", "end_pos": "264", "site_lbl": "Ser264", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "271", "end_pos": "271", "site_lbl": "Ser271", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "289", "end_pos": "289", "site_lbl": "Ser289", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29440595", "url": "https://glygen.org/publication/PubMed/29440595" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "296", "end_pos": "296", "site_lbl": "Ser296", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "599", "end_pos": "599", "site_lbl": "Ser599", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "Q39026-1", "kinase_gene_name": "MPK6", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "29871986", "url": "https://glygen.org/publication/PubMed/29871986" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "617", "end_pos": "617", "site_lbl": "Ser617", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-622; A-658; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "622", "end_pos": "622", "site_lbl": "Ser622", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Strong reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-658; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "658", "end_pos": "658", "site_lbl": "Ser658", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "660", "end_pos": "660", "site_lbl": "Ser660", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-658; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "677", "end_pos": "677", "site_lbl": "Thr677", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-658; A-660 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "682", "end_pos": "682", "site_lbl": "Ser682", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "Q39026-1", "kinase_gene_name": "MPK6", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "29871986", "url": "https://glygen.org/publication/PubMed/29871986" } ] }, { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "685", "end_pos": "685", "site_lbl": "Ser685", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-658; A-660 and A-677.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "692", "end_pos": "692", "site_lbl": "Ser692", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "Q39026-1", "kinase_gene_name": "MPK6", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "29871986", "url": "https://glygen.org/publication/PubMed/29871986" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "75", "end_pos": "75", "site_lbl": "Ser75", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "88", "end_pos": "88", "site_lbl": "Ser88", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "90", "end_pos": "90", "site_lbl": "Ser90", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "98", "end_pos": "98", "site_lbl": "Ser98", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9C5H5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9C5H5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { "uniprot_canonical_ac": "Q9C5H5-1", "start_pos": "375", "end_pos": "375", "site_lbl": "Lys375", "weight": 0.0, "mutagenesis": [ { "sequence_org": "K", "sequence_mut": "M", "comment": "Inactive. Interacts with PBL27.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://glygen.org/publication/PubMed/27679653" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K5T2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 323, "chemical_mass": 34326.0, "gene_names": "DES1;DES1;F15F15.100;F15F15_100;L-cysteine desulfhydrase 1", "protein_name": "Bifunctional cystathionine gamma-lyase/cysteine synthase", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" } ], "biological_process": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "cysteine biosynthetic process from serine", "id": "GO:0006535", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006535", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "stress response to cadmium ion", "id": "GO:1990170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990170", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "intracellular cysteine homeostasis", "id": "GO:0080145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080145", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" } ], "molecular_function": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "cystathionine gamma-lyase activity", "id": "GO:0004123", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004123", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "L-cysteine desulfhydrase activity", "id": "GO:0080146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080146", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" }, { "name": "cysteine synthase activity", "id": "GO:0004124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004124", "evidence": [ { "database": "UniProtKB", "id": "F4K5T2", "url": "https://www.uniprot.org/uniprotkb/F4K5T2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4KGQ0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 393, "chemical_mass": 42906.0, "gene_names": "FBA4;AtFBA4;F17C15.110;F17C15_110;FBA4;fructose-bisphosphate aldolase 4", "protein_name": "Fructose-bisphosphate aldolase 4, cytosolic", "disease": [], "molecular_function": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" }, { "name": "fructose-bisphosphate aldolase activity", "id": "GO:0004332", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004332", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" } ], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" } ], "biological_process": [ { "name": "gluconeogenesis", "id": "GO:0006094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006094", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" }, { "name": "glycolytic process", "id": "GO:0006096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006096", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" }, { "name": "fructose 1,6-bisphosphate metabolic process", "id": "GO:0030388", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030388", "evidence": [ { "database": "UniProtKB", "id": "F4KGQ0", "url": "https://www.uniprot.org/uniprotkb/F4KGQ0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "264", "end_pos": "264", "site_lbl": "Thr264", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 264, "start_aa": "Thr", "end_pos": 264, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr264", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "338", "end_pos": "338", "site_lbl": "Ser338", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KGQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KGQ0" } ] } ] }, { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "339", "end_pos": "339", "site_lbl": "Thr339", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KGQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KGQ0" } ] } ] }, { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "66", "end_pos": "66", "site_lbl": "Ser66", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KGQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KGQ0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "69", "end_pos": "69", "site_lbl": "Thr69", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KGQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KGQ0" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "F4KGQ0-1", "start_pos": "76", "end_pos": "76", "site_lbl": "Ser76", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "F4KGQ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/F4KGQ0" }, { "database": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4K1J4-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1423, "chemical_mass": 158663.0, "gene_names": "ATXR7;SDG25;ARABIDOPSIS TRITHORAX-RELATED7;ATXR7;MDH9.9;MDH9_9;SDG25;SET domain protein 25", "protein_name": "Histone-lysine N-methyltransferase ATXR7", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "Set1C/COMPASS complex", "id": "GO:0048188", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048188", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "flower development", "id": "GO:0009908", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009908", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "regulation of flower development", "id": "GO:0009909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009909", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "vegetative to reproductive phase transition of meristem", "id": "GO:0010228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010228", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" } ], "molecular_function": [ { "name": "histone H3K4 methyltransferase activity", "id": "GO:0042800", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042800", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "histone H3K36 methyltransferase activity", "id": "GO:0046975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046975", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "histone H3K36 dimethyltransferase activity", "id": "GO:0140954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140954", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "histone H3K4 trimethyltransferase activity", "id": "GO:0140999", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140999", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" }, { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F4K1J4", "url": "https://www.uniprot.org/uniprotkb/F4K1J4" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "F4K1J4-1", "start_pos": "968", "end_pos": "968", "site_lbl": "Ser968", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8BBK4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8BBK4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9SAZ5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 155, "chemical_mass": 17479.0, "gene_names": "AHP3;AHP3;ARABIDOPSIS THALIANA HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2;ATHP2;HIS-ASP PHOSPHOTRANSFER SIGNAL TRANSDUCER;MUL8.20;MUL8.2;MUL8_20;histidine-containing phosphotransmitter 3", "protein_name": "Histidine-containing phosphotransfer protein 3", "disease": [], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" } ], "biological_process": [ { "name": "phosphorelay signal transduction system", "id": "GO:0000160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000160", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "cytokinin-activated signaling pathway", "id": "GO:0009736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009736", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "antipodal cell differentiation", "id": "GO:0009557", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009557", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "embryo sac egg cell differentiation", "id": "GO:0009560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009560", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" } ], "molecular_function": [ { "name": "protein histidine kinase binding", "id": "GO:0043424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043424", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" }, { "name": "histidine phosphotransfer kinase activity", "id": "GO:0009927", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009927", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9SAZ5-1", "start_pos": "82", "end_pos": "82", "site_lbl": "His82", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9SAZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SAZ5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 529, "chemical_mass": 58710.0, "gene_names": "BIM1;BHLH46;BIM1;EN126;T22D6.70;T22D6_70", "protein_name": "Transcription factor BIM1", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "brassinosteroid mediated signaling pathway", "id": "GO:0009742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009742", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" }, { "name": "positive regulation of shade avoidance", "id": "GO:1902448", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902448", "evidence": [ { "database": "UniProtKB", "id": "Q9LEZ3", "url": "https://www.uniprot.org/uniprotkb/Q9LEZ3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "36", "end_pos": "36", "site_lbl": "Thr36", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 36, "start_aa": "Thr", "end_pos": 36, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr36", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "219", "end_pos": "219", "site_lbl": "Ser219", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Ser231", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "268", "end_pos": "268", "site_lbl": "Ser268", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "435", "end_pos": "435", "site_lbl": "Ser435", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "437", "end_pos": "437", "site_lbl": "Ser437", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] } ] }, { "uniprot_canonical_ac": "Q9LEZ3-1", "start_pos": "440", "end_pos": "440", "site_lbl": "Ser440", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9LEZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LEZ3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9LTB8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 213, "chemical_mass": 24532.0, "gene_names": "CBL9;ATCBL9;CBL9;K14A3.5;K14A3_5;calcineurin B-like protein 9", "protein_name": "Calcineurin B-like protein 9", "disease": [], "cellular_component": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" } ], "biological_process": [ { "name": "calcium-mediated signaling", "id": "GO:0019722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019722", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "response to water deprivation", "id": "GO:0009414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009414", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "abscisic acid-activated signaling pathway", "id": "GO:0009738", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009738", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "pollen tube growth", "id": "GO:0009860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009860", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" } ], "molecular_function": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" }, { "name": "kinase binding", "id": "GO:0019900", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019900", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9LTB8-1", "start_pos": "201", "end_pos": "201", "site_lbl": "Ser201", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" }, { "database": "iPTMnet", "id": "Q9LTB8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LTB8" }, { "database": "PubMed", "id": "21685179", "url": "https://glygen.org/publication/PubMed/21685179" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Loss of phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" }, { "database": "PubMed", "id": "21685179", "url": "https://glygen.org/publication/PubMed/21685179" } ] }, { "sequence_org": "S", "sequence_mut": "D", "comment": "Increased interaction with CIPK23.", "evidence": [ { "database": "UniProtKB", "id": "Q9LTB8", "url": "https://www.uniprot.org/uniprotkb/Q9LTB8" }, { "database": "PubMed", "id": "21685179", "url": "https://glygen.org/publication/PubMed/21685179" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q8W4S5-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 614, "chemical_mass": 68434.0, "gene_names": "MBK5.19;MBK5.19;MBK5_19", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g63710", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" }, { "name": "transmembrane receptor protein serine/threonine kinase activity", "id": "GO:0004675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004675", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" }, { "name": "protein serine kinase activity", "id": "GO:0106310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106310", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" } ], "cellular_component": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" } ], "biological_process": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "125", "end_pos": "125", "site_lbl": "Asn125", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 125, "start_aa": "Asn", "end_pos": 125, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn125", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "146", "end_pos": "146", "site_lbl": "Asn146", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 146, "start_aa": "Asn", "end_pos": 146, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn146", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "175", "end_pos": "175", "site_lbl": "Asn175", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 175, "start_aa": "Asn", "end_pos": 175, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn175", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "65", "end_pos": "65", "site_lbl": "Asn65", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 65, "start_aa": "Asn", "end_pos": 65, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn65", "evidence": [ { "id": "Q8W4S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5#ptm_processing" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "286", "end_pos": "286", "site_lbl": "Thr286", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "312", "end_pos": "312", "site_lbl": "Thr312", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "370", "end_pos": "370", "site_lbl": "Ser370", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "389", "end_pos": "389", "site_lbl": "Thr389", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "449", "end_pos": "449", "site_lbl": "Thr449", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "450", "end_pos": "450", "site_lbl": "Thr450", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "455", "end_pos": "455", "site_lbl": "Thr455", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "463", "end_pos": "463", "site_lbl": "Tyr463", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "466", "end_pos": "466", "site_lbl": "Thr466", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "470", "end_pos": "470", "site_lbl": "Ser470", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] }, { "uniprot_canonical_ac": "Q8W4S5-1", "start_pos": "545", "end_pos": "545", "site_lbl": "Thr545", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q8W4S5", "url": "https://www.uniprot.org/uniprotkb/Q8W4S5" } ] } ] } ], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "Q9XGX0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 331, "chemical_mass": 35377.0, "gene_names": "SHI;K1L20.13;K1L20_13;SHI;SHORT INTERNODES", "protein_name": "Protein SHORT INTERNODES", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "gibberellic acid mediated signaling pathway", "id": "GO:0009740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009740", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "pollen development", "id": "GO:0009555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009555", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "auxin-activated signaling pathway", "id": "GO:0009734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009734", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "response to gibberellin", "id": "GO:0009739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009739", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "auxin biosynthetic process", "id": "GO:0009851", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009851", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "negative regulation of gibberellic acid mediated signaling pathway", "id": "GO:0009938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009938", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" }, { "name": "anther development", "id": "GO:0048653", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048653", "evidence": [ { "database": "UniProtKB", "id": "Q9XGX0", "url": "https://www.uniprot.org/uniprotkb/Q9XGX0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" }, { "uniprot_canonical_ac": "F4KHI3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 1168, "chemical_mass": 132789.0, "gene_names": "VICTR;K11I1.11;K11I1_11;VARIATION IN COMPOUND TRIGGERED ROOT growth response;VICTR", "protein_name": "Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" }, { "name": "ADP binding", "id": "GO:0043531", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043531", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" }, { "name": "NAD+ nucleosidase activity, cyclic ADP-ribose generating", "id": "GO:0061809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061809", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" } ], "biological_process": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" }, { "name": "regulation of root meristem growth", "id": "GO:0010082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010082", "evidence": [ { "database": "UniProtKB", "id": "F4KHI3", "url": "https://www.uniprot.org/uniprotkb/F4KHI3" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "batch.arabidopsis.11" } ]