{
    "bcoid": "GLY_001529",
    "title": "Pig Glycan TableMaker Citations",
    "description": "The Pig Glycan Tissue Expression TableMaker Citations dataset provides citation information for glycan ...",
    "filename_list": "pig_proteoform_citations_glycosylation_sites_tablemaker.csv",
    "filename": "pig_proteoform_citations_glycosylation_sites_tablemaker.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "Glycan Tissue Expression TableMaker Citations"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Sus scrofa"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "...",
                "Adhesion of ..."
            ],
            [
                "...",
                "Mannosylphos..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "isoform_mapping_notes"
                }
            ],
            [
                "",
                "Adhesion of K99 fimbriated Escherichia coli to pig intestinal epithelium: correlation of adhesive and non-adhesive phenotypes with the sialoglycolipid content.",
                "Journal of general microbiology",
                "1991-07",
                "Seignole D, Mouricout M, Duval-Iflah Y, Quintard B, Julien R",
                "glycan_xref_pubmed",
                "1683399",
                "glycan_xref_tablemaker",
                "TG10381046",
                "G75789AR",
                ""
            ],
            [
                "",
                "Mannosylphosphoryldolichol-mediated reactions in oligosaccharide-P-P-dolichol biosynthesis. Recognition of the saturated alpha-isoprene unit of the mannosyl donor by pig brain mannosyltransferases.",
                "The Journal of biological chemistry",
                "1993-06-25",
                "Rush J S, Shelling J G, Zingg N S, Ray P H, Waechter C J",
                "glycan_xref_pubmed",
                "8514752",
                "glycan_xref_tablemaker",
                "TG10381046",
                "G68668TB",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Pig Glycan TableMaker Citations\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2023-03-14T20:00:08.127Z\n\nModified on\n   - 2025-03-04T15:53:49.509Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Pig Glycan Tissue Expression TableMaker Citations dataset provides citation information for glycan tissue expression annotations for Sus scrofa [TaxID: 9823]. Annotated by the TableMaker team, this dataset is available through GlyGen. More details: https://glygen.ccrc.uga.edu/tablemaker.\n\nDescription Domain\n   Keywords\n   - TableMaker\n   - glycan\n   - Citations\n\n   Pipeline Steps\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/all_blacklisted_pmids.csv\n   Output Subdomain\n      Name: pig_proteoform_citations_glycosylation_sites_tablemaker.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/pig_proteoform_citations_glycosylation_sites_tablemaker.csv\n      Name: pig_proteoform_citations_glycosylation_sites_tablemaker.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/pig_proteoform_citations_glycosylation_sites_tablemaker.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/pig_proteoform_citations_glycosylation_sites_tablemaker.csv"
}