{
    "bcoid": "GLY_001443",
    "title": "Fruit fly Protein Citations (IEDB)",
    "description": "The Fruit fly Protein Citations (IEDB) dataset contains Drosophila melanogaster [taxid:7227] UniProtKB ...",
    "filename_list": "fruitfly_protein_citations_iedb.csv",
    "filename": "fruitfly_protein_citations_iedb.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Drosophila melanogaster"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Protein Citations"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "O17444-1...",
                "Data on the ..."
            ],
            [
                "P04052-1...",
                "Epitope mapp..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                }
            ],
            [
                "O17444-1",
                "Data on the specificity of an antibody to Drosophila vesicular acetylcholine transporter.",
                "Data in brief",
                "2017-12",
                "Boppana Sridhar, Lawal Hakeem O",
                "protein_xref_pubmed",
                "29034290",
                "protein_xref_iedb",
                "769298"
            ],
            [
                "P04052-1",
                "Epitope mapping by phage display: random versus gene-fragment libraries.",
                "Journal of immunological methods",
                "1997-08-07",
                "Fack F, H\u00fcgle-D\u00f6rr B, Song D, Queitsch I, Petersen G, Bautz E K",
                "protein_xref_pubmed",
                "9328567",
                "protein_xref_iedb",
                "47428"
            ]
        ]
    },
    "readme": "Name\n   - Fruit fly Protein Citations (IEDB)\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2025-07-30T15:32:29.285Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu], Mariia Kim [maria.kim@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Fruit fly Protein Citations (IEDB) dataset contains Drosophila melanogaster [taxid:7227] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors, and the corresponding IEDB accession). If you use this dataset provide proper attribution to IEDB, GlyGen and EBI-EMBL-UniProtKB.\n   - The Immune Epitope Database (IEDB) catalogs experimental data on antibody and T cell epitopes in the context of infectious disease, allergy, autoimmunity and transplantation.\n\nDescription Domain\n   Keywords\n   - PMID\n   - journal\n   - citations\n   - authors\n   - PubMed\n   - IEDB\n\n   Pipeline Steps\n   - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs.\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: fruitfly_protein_iedb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/fruitfly_protein_iedb.csv\n   Output Subdomain\n      Name: fruitfly_protein_citations_iedb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/fruitfly_protein_citations_iedb.csv\n      Name: fruitfly_protein_citations_iedb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/fruitfly_protein_citations_iedb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"10\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/fruitfly_protein_citations_iedb.csv"
}