{
    "bcoid": "GLY_001311",
    "title": "Zebrafish Protein Sequence Info (UniProtKB)",
    "description": "The Zebrafish Protein Sequence Info (UniProtKB) dataset contains Danio rerio [taxid:7955] UniProtKB protein ...",
    "filename_list": "zebrafish_protein_sequenceinfo.csv",
    "filename": "zebrafish_protein_sequenceinfo.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Danio rerio"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "All Protein Sequence Info"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "annotation"
        ]
    },
    "minitable": {
        "content": [
            [
                "A0AB32TMT8-1...",
                "A0AB32TMT8-1..."
            ],
            [
                "A0AB32TMU3-1...",
                "A0AB32TMU3-1..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "uniprotkb_is..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_isoform_ac"
                },
                {
                    "type": "string",
                    "label": "protein_existence"
                },
                {
                    "type": "string",
                    "label": "sequence_version"
                },
                {
                    "type": "string",
                    "label": "sequence_header"
                }
            ],
            [
                "A0AB32TMT8-1",
                "A0AB32TMT8-1",
                "4",
                "1",
                "tr|A0AB32TMT8-1|A0AB32TMT8_DANRE Isoform 1 of Tripartite motif-containing protein 16-like  OS=Danio rerio OX=7955 GN=LOC137491427 PE=4 SV=1 CANONICAL=A0AB32TMT8-1"
            ],
            [
                "A0AB32TMU3-1",
                "A0AB32TMU3-1",
                "4",
                "1",
                "tr|A0AB32TMU3-1|A0AB32TMU3_DANRE Isoform 1 of Uncharacterized protein  OS=Danio rerio OX=7955 GN=LOC110439297 PE=4 SV=1 CANONICAL=A0AB32TMU3-1"
            ]
        ]
    },
    "readme": "Name\n   - Zebrafish Protein Sequence Info (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - \n\nModified on\n   - \n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Zebrafish Protein Sequence Info (UniProtKB) dataset contains Danio rerio [taxid:7955] UniProtKB protein fasta sequence information that includes sequence version and fasta header. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein sequence info\n   - fasta header\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB sequence for all zebrafish isoform accessions data from the triplestore containing triples from nt file and extracts it into a dataset in a fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-danio-rerio.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-danio-rerio.nt\n   Output Subdomain\n      Name: zebrafish_protein_sequenceinfo.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_sequenceinfo.csv\n      Name: zebrafish_protein_sequenceinfo.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_sequenceinfo.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"20499\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/zebrafish_protein_sequenceinfo.csv"
}