{
    "bcoid": "GLY_001277",
    "title": "Zebrafish Glycohydrolases",
    "description": "The Zebrafish Glycohydrolases dataset contains a list of Danio rerio [taxid:7955] glycohydrolases derived ...",
    "filename_list": "zebrafish_protein_glycohydrolase.csv",
    "filename": "zebrafish_protein_glycohydrolase.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Danio rerio"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Glycohydrolases"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "pathway/enzymes"
        ]
    },
    "minitable": {
        "content": [
            [
                "A3KPQ7-1...",
                "Danio rerio ..."
            ],
            [
                "Q5SNX7-1...",
                "Danio rerio ..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "species..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "species"
                },
                {
                    "type": "string",
                    "label": "status"
                },
                {
                    "type": "string",
                    "label": "gene_symbol"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_name"
                },
                {
                    "type": "string",
                    "label": "ec_number"
                },
                {
                    "type": "string",
                    "label": "brenda_ec_number"
                },
                {
                    "type": "string",
                    "label": "cazy_gh_family"
                },
                {
                    "type": "string",
                    "label": "interpro_id"
                },
                {
                    "type": "string",
                    "label": "pfam_ac"
                },
                {
                    "type": "string",
                    "label": "go_molecular_function"
                }
            ],
            [
                "A3KPQ7-1",
                "Danio rerio (Zebrafish) (Brachydanio rerio)",
                "reviewed",
                "cemip2",
                "Cell surface hyaluronidase (EC 3.2.1.35) (Cell migration-inducing hyaluronidase 2) (Protein frozen ventricle) (Protein wickham) (Transmembrane protein 2)",
                "3.2.1.35",
                "",
                "",
                "IPR019316|IPR052252|IPR039477|IPR011050|IPR039473",
                "PF10162|PF15711",
                "calcium ion binding [GO:0005509]| carbohydrate binding [GO:0030246]| hyalurononglucosaminidase activity [GO:0004415]"
            ],
            [
                "Q5SNX7-1",
                "Danio rerio (Zebrafish) (Brachydanio rerio)",
                "reviewed",
                "galc",
                "Galactocerebrosidase (GALCERase) (EC 3.2.1.46) (Galactosylceramidase)",
                "3.2.1.46",
                "",
                "GH59",
                "IPR013785|IPR049162|IPR049161|IPR001286|IPR035394|IPR017853",
                "PF02057|PF21708|PF17387",
                "galactosylceramidase activity [GO:0004336]"
            ]
        ]
    },
    "readme": "Name\n   - Zebrafish Glycohydrolases\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - \n\nModified on\n   - \n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Jeet Vora [jeetvora@gwu.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The Zebrafish Glycohydrolases dataset contains a list of Danio rerio [taxid:7955] glycohydrolases derived from UniProtKB database using advanced search and other databases including CAZy, InterPro and Pfam. If you use this dataset please provide proper attribution to UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - glycohydrolase\n   - glycosidase\n   - EC Number\n   - CAZy\n\n   Pipeline Steps\n   - Step-1: The script maps and replaces the UniProtKb accession to the UniProtKB canonical accession\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: zebrafish_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/zebrafish_protein_glycohydrolase.csv\n      Name: zebrafish_protein_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_masterlist.csv\n   Output Subdomain\n      Name: zebrafish_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_glycohydrolase.csv\n      Name: zebrafish_protein_glycohydrolase.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_glycohydrolase.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"4\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/zebrafish_protein_glycohydrolase.csv"
}