{
    "bcoid": "GLY_001249",
    "title": "Arabidopsis UniProtKB Xref TAIR",
    "description": "The Arabidopsis UniprotKB Xref Arabidopsis Information Resource (TAIR) contains Arabidopsis thaliana ...",
    "filename_list": "arabidopsis_protein_xref_tair.csv",
    "filename": "arabidopsis_protein_xref_tair.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Arabidopsis thaliana"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "TAIR cross-references"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "xref_"
        ]
    },
    "minitable": {
        "content": [
            [
                "A0A1P8B0W0-1...",
                "protein_xref..."
            ],
            [
                "A0A1P8B0X8-1...",
                "protein_xref..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "xref_key..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_label"
                }
            ],
            [
                "A0A1P8B0W0-1",
                "protein_xref_tair",
                "AT2G20873",
                ""
            ],
            [
                "A0A1P8B0X8-1",
                "protein_xref_tair",
                "AT2G14095",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Arabidopsis UniProtKB Xref TAIR\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2024-11-11T20:40:39.023Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Arabidopsis UniprotKB Xref Arabidopsis Information Resource (TAIR) contains Arabidopsis thaliana [taxid:3702] UniProtKB canonical accessions cross-referenced to TAIR database accessions/identifiers. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n   - TAIR is a database of genetic and molecular biology data for Arabidopsis thaliana. Information includes gene structure, gene function, gene expression, DNA and seed stocks, genome maps, genetic and physical markers, publications, and information about the Arabidopsis research community.\n\nDescription Domain\n   Keywords\n   - TAIR\n   - cross-reference\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB canonical accessions that are cross-referenced to TAIR database accessions/identifiers from the triplestore containing triples from nt file and extracts the data as a csv dataset\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-arabidopsis-thaliana.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-arabidopsis-thaliana.nt\n   Output Subdomain\n      Name: arabidopsis_protein_xref_tair.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/arabidopsis_protein_xref_tair.csv\n      Name: arabidopsis_protein_xref_tair.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/arabidopsis_protein_xref_tair.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"25054\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/arabidopsis_protein_xref_tair.csv"
}