{
    "bcoid": "GLY_001241",
    "title": "Bovine Protein Recommended Names (UniProtKB)",
    "description": "The Bovine Protein Recommended Names (UniProtKB) dataset contains UniProtKB recommended names for Bos ...",
    "filename_list": "bovine_protein_recnames.csv",
    "filename": "bovine_protein_recnames.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Bos taurus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Protein Recommended Names"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "names"
        ]
    },
    "minitable": {
        "content": [
            [
                "P10894-1...",
                "1-phosphatid..."
            ],
            [
                "Q8MKF1-1...",
                "Thiamine-tri..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "recommended_..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "recommended_name_full"
                },
                {
                    "type": "string",
                    "label": "recommended_name_short"
                },
                {
                    "type": "string",
                    "label": "ec_name"
                }
            ],
            [
                "P10894-1",
                "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1",
                "",
                "3.1.4.11"
            ],
            [
                "Q8MKF1-1",
                "Thiamine-triphosphatase",
                "ThTPase",
                "3.6.1.28"
            ]
        ]
    },
    "readme": "Name\n   - Bovine Protein Recommended Names (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2024-11-11T19:00:40.366Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Bovine Protein Recommended Names (UniProtKB) dataset contains UniProtKB recommended names for Bos taurus [taxid:9913] proteins. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein recommended name\n   - protein name\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB recommended names for protein accessions from the triplestore containing triples from nt file and extracts the recommended names into csv dataset file\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-bos-taurus.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-bos-taurus.nt\n   Output Subdomain\n      Name: bovine_protein_recnames.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bovine_protein_recnames.csv\n      Name: bovine_protein_recnames.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bovine_protein_recnames.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"15451\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/bovine_protein_recnames.csv"
}