{
    "bcoid": "GLY_000634",
    "title": "Fruitfly Protein Isoform sequences (UniProtKB)",
    "description": "The Fruitfly Protein Isoform sequences (UniProtKB) dataset contains fruitfly [taxid:7227] protein fasta ...",
    "filename_list": "fruitfly_protein_allsequences.fasta",
    "filename": "fruitfly_protein_allsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Drosophila melanogaster"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "All Protein Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "sequence"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|A0A0B4JCR3-1|A0A0B4JCR3_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG42782 PE=4 SV=1 CANONICAL=A0A0B4JCR3-1\nMLISQYSGLKLMLLMVGLGMASSYEIIRQCPVHFVFKNNYCQYQPM\n\n\n>tr|A0A0B4JCZ3-1|A0A0B4JCZ3_DROME Isoform 1 of Pre-mod(Mdg4)-W, isoform A OS=Drosophila melanogaster OX=7227 GN=pre-mod(mdg4)-W PE=4 SV=2 CANONICAL=A0A0B4JCZ3-1\nHLSTLRHLPVEAIFDADGKQMDFIPNIRVIRSQRKTIKLMFKKYAYSKTNEHDTTTYWHC\nRSRRNGRPACKARFSTKKLKNGSYKVYLTQPEHNHPPKKRRL\n\n\n>tr|A0A0B4JDF8-1|A0A0B4JDF8_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG42779 PE=4 SV=1 CANONICAL=A0A0B4JDF8-1\nMKFFAILLLLCTMVAVAIAATTTTTTENIDWGSASTTEIPATTTATPCESADAKKLYFFY\nK\n\n\n>tr|A0A0B4JDG0-1|A0A0B4JDG0_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG42834 PE=4 SV=1 CANONICAL=A0A0B4JDG0-1\nMALRIIFVFIATIVLAQGSNISPVAQENLVRVHHSGVVSSGAPAVGVTQSRSVVSQAQRP\nNYGQRSISGSIGGSRRVGEVPVSGSRPHGGAPRRSSASAYARPIGGGATPGYVHRNRNQK\nPY\n\n\n>tr|A0A0B4JDG3-1|A0A0B4JDG3_DROME Isoform 1 of Pre-mod(Mdg4)-X, isoform B OS=Drosophila melanogaster OX=7227 GN=pre-mod(mdg4)-X PE=4 SV=2 CANONICAL=A0A0B4JDG3-1\nCYQLVPNRRGGKNLIFQGHMYSVERKYRNSINWVCSKNSNSVLRCPARCVTNPESGNGIK\nLSHRRHNHPADAFKPHKRCRKRPGDRK\n\n\n>tr|A0A0B4K638-1|A0A0B4K638_DROME Isoform 1 of Phospholipid-transporting ATPase OS=Drosophila melanogaster OX=7227 GN=ATP8B PE=3 SV=1 CANONICAL=Q9VGD4-1\nMGTKTQPQLAKENERRIRANDKEFNAQFKYHNNYIKTSKYSLFTFLPFNLLEQFQRLANF\nYFLCLLVLQLIPAISSLTPVTTAIPLIGVLTLTAVKDAYDDIQRHISDSQVNNRKSKTLR\nNGKLVEAKWSEVQVGDVIRLDNNQFVAADTLLLSTSEPNGLCFIETAELDGETNLKAKQC\nLTETIELGDRHDSLWNFNGEIICERPNNLLNKFDGTLIWRGQRFALDNEKILLRGCVLRN\nTQWCYGVVVFAGVDTKLMQNSGKTQFKSTGVDRLLNFIIIGIVLFLVSICALFAIGCAIW\nEGLIGQHFQLYLPWEHIIPKDYIPTGATVIGLLVFFSYAIVLNTVVPISLYVSVEVIRFV\nQSFLINWDEEMYYPTTNTYAKARTTTLNEELGQIQYIFSDKTGTLTQNIMTFNKCSINGR\nSYGDVIDLRTGELVEITEQQTIFQNSNTNNRPSPLSGAIVAPPAAPPPIILVHKAEVHAK\nKTSMVVTSSGEAQVLPDRPRSDIERSAPPMDASEKRPGLKHVRYSAPSRSQDADAGRLSP\nRLDGSGGLSPPVGNEERRISGGFKRSGAGCMQRQLSRTSSCDKVKILHDSQQTETHNMHH\nSSHNRKRLVKIRFKKAPSTATLGVVISQLEHHLDEEPQSTSTLSTTKHHHHRSKAFATNW\nSSSPHRVHALQSVDFSANPHHESDFRWYDRTLLDAVRSDEEHSHVFFRLLALCHTVMAET\nVDGKLEYQAQSPDEAALVSAARNFGFVFRTRTPNSITIEVMGQTEEYELLNILDFNNVRK\nRMSVILRRGDSMVLYCKGADNVIYDRLHGGQEDLKARTQDHLNKFAGEGLRTLALAERRL\nTEQYYNDWRSRQQEAALSMDSREQKLNAIYEEIESEMQLVGVTAIEDKLQDGVPKSIANL\nQNAGIKIWVLTGDKQETAINIGYSCQLLTDELADVFIVDGNSVEEVEKQLRQFKESIKIY\nNRFRPGGFDPFDRLNSDSNMDPLSVTMTQTSAFMQETNLPPTPPPPPAISVVTFRWDEKN\nKDNKGGPDSAECNNLFGDEKGSEDGGTASIVVDENTGFALVVNGHSLVHCLSPELENKFL\nDIASQCKAVICCRVTPLQKALVVELIKRAKNAVTLAIGDGANDVSMIKAAHIGVGISGQE\nGLQAVLSSDYSIAQFRYLERLLLVHGRWSYYRMCKFLRYFFYKNFAFTLCHCWYSLFCGF\nSAQTVFDPMFISVYNLFYTSLPVLALGVFEQDVSDKNSLEFPRLYTPGLKSELFNIREFI\nYSVLHGAFTSLVLFLIPYGVYKDGVSANGFVVSDHMTLGAVVATILIVDNTAQISLYTSY\nWTVVNHVTIWGSLVWYFVLDYFYNYVIGGPYVGSLTQAMKDLTFWVTMLITVMALVAPVL\nAYKFYLLDVHPSLSDKIRQKSLKKIHSRASSDVRRTASSRRGRRSVRSGYAFAHQEGFGR\nLITSGKIMHKLPQDFAFPLGLGTKKTQVLHNNLNSADGPNSKGNNVTGHHMVNNNTNMRH\nNQNQNHSSMADITADGRGNGGDDGRGSGGSDDMSPRAPCQDLDTINL\n\n\n>tr|A0A0B4K684-1|A0A0B4K684_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG43210 PE=4 SV=1 CANONICAL=A0A0B4K684-1\nMTDSQIHLSYFICGPVFILMVFMYFYYWYLNVRECRRSRGREATPTLPDDISVERLQVY\n\n\n>tr|A0A0B4K6G0-1|A0A0B4K6G0_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG4702 PE=4 SV=1 CANONICAL=A0A0B4K6G0-1\nMWNQRKVHAYLLLSIVASNCLLMTYAFPQQEVYQRQHQVTQSPVYRDESVARKFAVKPNA\nSKKVALDDIEDDLETNQIQESVGGPGGFTWSNMLSTVMTMFFNGAVNSPTKSDDVDSSIG\nLGGSPWANVISMGLRIINTLLGGGAPSDGIDKVDNGGSPMQGILVAVMSAVLGSRDPDQV\nNSMAKQAGEFIQIVMNLLDALKTSFSHRSLTARSMGKRDSVSDAVVAGISLMKGYVRTYR\nTSEDKCTQRYMCDANTECVREIGGSSIFCQLGSYATSYVLGRTSGSNFEELYDAGRRGRS\nGFDCRQIYLECNEV\n\n\n>tr|Q9VGD1-1|A0A0B4K6G0_DROME Isoform 1 of Uncharacterized protein OS=Drosophila melanogaster OX=7227 GN=Dmel\\CG4702 PE=4 SV=2 CANONICAL=A0A0B4K6G0-1\nMWNQRKVHAYLLLSIVASNCLLMTYAFPQQEVYQRQHQVTQSPVYRDESVARKFAVKPNA\nSKKVALDDIEDDLETNQIQESVGGPGGFTWSNMLSTVMTMFFNGAVNSPTKSDDVDSSIG\nLGGSPWANVISMGLRIINTLLGGGAPSDGIDKVDNGGSPMQFIQIVMNLLDALKTSFSHR\nSLTARSMGKRDSVSDAVVAGISLMKGYVRTYRTSEDKCTQRYMCDANTECVREIGGSSIF\nCQLGSYATSYVLGRTSGSNFEELYDAGRRGRSGFDCRQIYLECNEV\n\n\n</pre>"
    },
    "readme": "Name\n   - Fruitfly Protein Isoform sequences (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2022-08-30T12:21:27.326808\n\nModified on\n   - 2024-05-17T11:24:07.336Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Fruitfly Protein Isoform sequences (UniProtKB) dataset contains fruitfly [taxid:7227] protein fasta sequences for the fruitfly isoform accessions from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein isoform sequences\n   - fasta\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all fruitfly isoform accessions data from the triplestore containing triples from nt file and extracts it into a dataset in a fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-drosophila-melanogaster.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-drosophila-melanogaster.nt\n   Output Subdomain\n      Name: fruitfly_protein_allsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/fruitfly_protein_allsequences.fasta\n      Name: fruitfly_protein_allsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/fruitfly_protein_allsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"20645\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/fruitfly_protein_allsequences.fasta"
}