{
    "bcoid": "GLY_000607",
    "title": "Human Proteoform Phosphorylation Citations (UniProtKB)",
    "description": "The Human Proteoform Phosphorylation Citations (UniProtKB) dataset contains human [taxid:9606] publication ...",
    "filename_list": "human_proteoform_citations_phosphorylation_sites_uniprotkb.csv",
    "filename": "human_proteoform_citations_phosphorylation_sites_uniprotkb.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Homo sapiens"
        ],
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "Phosphorylation Citations UniProtKB"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "P23677-1...",
                "Toward a com..."
            ],
            [
                "Q01469-1...",
                "Immunoaffini..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "isoform_mapping_notes"
                }
            ],
            [
                "P23677-1",
                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
                "protein_xref_uniprotkb",
                "P23677",
                ""
            ],
            [
                "Q01469-1",
                "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.",
                "Nature biotechnology",
                "2005 Jan",
                "Rush J, Moritz A, Lee KA, Guo A, Goss VL, Spek EJ, Zhang H, Zha XM, Polakiewicz RD, Comb MJ",
                "protein_xref_pubmed",
                "15592455",
                "protein_xref_uniprotkb",
                "Q01469",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Human Proteoform Phosphorylation Citations (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2021-10-15T08:00:04.645468\n\nModified on\n   - 2025-10-09T14:20:58.736Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Human Proteoform Phosphorylation Citations (UniProtKB) dataset contains human [taxid:9606] publication information of glycoproteins from UniProtKB. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID from UniProtKB.\n\nDescription Domain\n   Keywords\n   - publications\n   - PMID\n   - journal\n   - citations\n   - authors\n   - UniProtKB\n   - PubMed\n   - Phosphorylation\n\nExecution Domain\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/all_blacklisted_pmids.csv\n      Name: human_proteoform_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_proteoform_phosphorylation_sites_uniprotkb.csv\n   Output Subdomain\n      Name: human_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      Name: human_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"6152\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.csv"
}