{
    "bcoid": "GLY_000482",
    "title": "SARS CoV 2 Proteoform Citations (UniCarbKB)",
    "description": "Citation details (such as title, journal_name, publication_date, authors) corresponding to the Digital ...",
    "filename_list": "sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.csv",
    "filename": "sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.csv",
    "filetype": "csv",
    "categories": {
        "status": [
            "Reviewed"
        ],
        "molecule": [
            "Proteoform"
        ],
        "species": [
            "Severe acute respiratory syndrome coronavirus 2"
        ],
        "tag": [
            "Protein Citations"
        ],
        "file_type": [
            "csv"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "P0DTC2-1...",
                "Comprehensiv..."
            ],
            [
                "P0DTC2-1...",
                "Comprehensiv..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "isoform_mapping_notes"
                }
            ],
            [
                "P0DTC2-1",
                "Comprehensive Analysis of the Glycan Complement of SARS-CoV-2 Spike Proteins Using Signature Ions-Triggered Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry.",
                "Analytical chemistry",
                "2020 Nov 3",
                "Wang D, Baudys J, Bundy JL, Solano M, Keppel T, Barr JR",
                "protein_xref_pubmed",
                "33064451",
                "protein_xref_unicarbkb_ds",
                "GLY_000479",
                "G59937CP",
                ""
            ],
            [
                "P0DTC2-1",
                "Comprehensive Analysis of the Glycan Complement of SARS-CoV-2 Spike Proteins Using Signature Ions-Triggered Electron-Transfer/Higher-Energy Collisional Dissociation (EThcD) Mass Spectrometry",
                "Anal. Chem.",
                "2020",
                "Wang D., Baudys J., Bundy J.L., Solano M., Keppel T., Barr J.R.",
                "protein_xref_doi",
                "10.1021/acs.analchem.0c03301",
                "protein_xref_unicarbkb_ds",
                "GLY_000479",
                "G59937CP",
                ""
            ]
        ]
    },
    "readme": "Name\n   - SARS CoV 2 Proteoform Citations (UniCarbKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2020-04-20T17:08:49.084209\n\nModified on\n   - 2024-12-05T19:17:51.633Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Matthew Campbell  [m.campbell2@griffith.edu.au]\n\nChecksum\n   - \n\nUsability Domain\n   - Citation details (such as title, journal_name, publication_date, authors) corresponding to the Digital Object Identifiers (DOI)/PMID present in dataset https://data.glygen.org/GLYDS000479\n\nDescription Domain\n   Keywords\n   - Proteins\n   - DOI (Digital Object Identifier)\n\n   Pipeline Steps\n   - Step-1: The DOI(s) were extracted from dataset https://data.glygen.org/GLYDS000479. The corresponding details were manually compiled by the provider. \n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/all_blacklisted_pmids.csv\n      Name: doi_citations.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/doi_citations.csv\n      Name: sarscov2_proteoform_citations_unicarbkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/sarscov2_proteoform_citations_unicarbkb.csv\n   Output Subdomain\n      Name: sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.csv\n      Name: sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/sarscov2_proteoform_citations_glycosylation_sites_unicarbkb.csv"
}