{
    "bcoid": "GLY_000366",
    "title": "HCV1b Protein Enzyme Annotation (UniProtKB)",
    "description": "The Hepatitis C virus (genotype 1b, isolate Japanese) Protein Enzyme Annotation (UniProtKB) dataset contains ...",
    "filename_list": "hcv1b_protein_enzyme_annotation_uniprotkb.csv",
    "filename": "hcv1b_protein_enzyme_annotation_uniprotkb.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Hepatitis c virus (isolate japanese)"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "enzyme annotation"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "annotation"
        ]
    },
    "minitable": {
        "content": [
            [
                "P26662-1...",
                "3.6.1.15..."
            ],
            [
                "P26662-1...",
                "2.7.7.48..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "enzyme_ec..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "enzyme_ec"
                },
                {
                    "type": "string",
                    "label": "enzyme_activity"
                }
            ],
            [
                "P26662-1",
                "3.6.1.15",
                "a ribonucleoside 5'-triphosphate + H2O = a ribonucleoside 5'-diphosphate + phosphate + H(+)."
            ],
            [
                "P26662-1",
                "2.7.7.48",
                "RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate."
            ]
        ]
    },
    "readme": "Name\n   - HCV1b Protein Enzyme Annotation (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2020-03-14T16:18:24.887237\n\nModified on\n   - 2024-06-03T20:53:41.585Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Hepatitis C virus (genotype 1b, isolate Japanese) Protein Enzyme Annotation (UniProtKB) dataset contains Hepatitis C virus (isolate Japanese) [taxid:11116] enzyme annotations for UniProtKB canonical accessions. The dataset contains ec numbers and enzyme activity that describes the enzymatic reactions. If you use this dataset please give proper attribution to UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - enzyme annotation\n   - enzyme \n   - UniProtKB\n   - enzyme activity\n   - EC number\n\n   Pipeline Steps\n   - Step-1: The script extracts the enzyme annotation triples from the triplestore for the UniProtKB canonical sequences and extracts as a dataset in a csv format.\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-hepatitis-c-virus-1b.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-hepatitis-c-virus-1b.nt\n   Output Subdomain\n      Name: hcv1b_protein_enzyme_annotation_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/hcv1b_protein_enzyme_annotation_uniprotkb.csv\n      Name: hcv1b_protein_enzyme_annotation_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/hcv1b_protein_enzyme_annotation_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/hcv1b_protein_enzyme_annotation_uniprotkb.csv"
}