{
    "bcoid": "GLY_000054",
    "title": "Mouse Protein Isoform sequences (UniProtKB)",
    "description": "The Mouse Protein Isoform sequences (UniProtKB) dataset contains Mus musculus [taxid:10090] protein fasta ...",
    "filename_list": "mouse_protein_allsequences.fasta",
    "filename": "mouse_protein_allsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Mus musculus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "All Protein Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "sequence"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|A0A087WQJ1-1|FFAR2_MOUSE Isoform 1 of Free fatty acid receptor 2 OS=Mus musculus OX=10090 GN=Ffar2 PE=1 SV=1 CANONICAL=Q8VCK6-1\nMTPDWHSSLILTAYILIFLTGLPANLLALRAFMGRVRQPQPAPVHILLLNLTLADLLLLL\nLLPFRIVEAASNFRWYLPKIVCALTGFGFYSSIYCSTWLLAGISMERYLGVAFPVQYKLS\nRRPLYGVIAALVAWIMSFGHCT\n\n\n>sp|Q8VCK6-1|FFAR2_MOUSE Isoform 1 of Free fatty acid receptor 2 OS=Mus musculus OX=10090 GN=Ffar2 PE=1 SV=1 CANONICAL=Q8VCK6-1\nMTPDWHSSLILTAYILIFLTGLPANLLALRAFMGRVRQPQPAPVHILLLNLTLADLLLLL\nLLPFRIVEAASNFRWYLPKIVCALTGFGFYSSIYCSTWLLAGISMERYLGVAFPVQYKLS\nRRPLYGVIAALVAWIMSFGHCTIVIIVQYLNSTEQVGTENQITCYENFTQEQLDVVLPVR\nLELCLVLFFVPMAVTIFCYWRFVWIMLTQPHVGAQRRRRAVGLAVVTLLNFLVCFGPYNM\nSHLVGFYLRQSPSWRVEAVVFSSLNASLDPLLFYFSSSVVRRAFGKGLLLIRNPASSMLG\nRGAKETVEGTKMDRGGSQAEGVQSSEFVTE\n\n\n>tr|A0A087WR67-1|FFAR2_MOUSE Isoform 1 of Free fatty acid receptor 2 OS=Mus musculus OX=10090 GN=Ffar2 PE=1 SV=1 CANONICAL=Q8VCK6-1\nMTPDWHSSLILTAYILIFLTGLPANLLALRAFMGRVRQPQPAPVHILLLNLTLADLLLLL\nLLPFRIVEAASNFRWYLPKIVCALTGFGFYSSIYCSTWLLAGISMERYLGVAFPVQYKLS\nRRPLYGVIAALVAWIMSFGHCTIVIIVQYLNSTEQVGTENQITCYENFTQEQLDVVLPVR\nLE\n\n\n>tr|A0A087WR60-1|FFAR2_MOUSE Isoform 1 of Free fatty acid receptor 2 OS=Mus musculus OX=10090 GN=Ffar2 PE=1 SV=1 CANONICAL=Q8VCK6-1\nMTPDWHSSLILTAYILIFLTGLPANLLALRAFMGRVRQPQPAPVHILLLNLTLADLLLLL\nLLPFRIVEAASNFRWYLPKIVCALTGFGFYSSIYCSTWLLAGISMERYLGVAFPVQYKLS\nRRPLYGVIAALVA\n\n\n>tr|A0A0A6YVU7-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nGQHGSRYYYEQEHSEEESDSQHQHGHQHEQQRGHQHQHEHEQPESGHRQQQSSGRGHQGA\nHQEQGRDSARSRGSNQGHSSSRHQADSPRVSARSGSGGRGQSPDASGRSSNRRDRPRQPS\nPSQSSDSQVHSGVQVEGRRGQSSSANRRAGSSSGSGVQGASAGGLAADASRRSGARQGQA\nSAQGRAGSQGQAQGRIGSSADRQGRRGVSESQASDSEGHSDFSEGQAVGAHRQSEAGQRH\nEQRSSRGQHGSG\n\n\n>sp|P11088-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nPDGSGRSSNRRDRPRQLSPSQSSDSQVHSGVQVEGRRGHSSSANRRAGSSSGSGVQGASA\nGGLAADASRRSGARQGQASAQGRAGSQGQAQGRVSSSADRQGRRGVSESRASDSEGHSDF\nSEGQAVGAHRQSGAGQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQQRGHQH\nQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPRGSNQGHSSSRHQADSPRVSA\nRSGSGGRGQSPDASGRSSNRRDRPRQPSPSQSSDSQVHSGVQVEAQRGQSSSANRRAGSS\nSGSGVQGAAASGQGGYESIFTAKHLDFNQSHSYYYY\n\n\n>tr|A0A0A6YXH0-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nGQHGSGYYYEQEHSEEESDSQHQHSHQHEQQRGHQHQHQHQHEHEQPESGHRQQQFSGRG\nHQGAHQEQGRDSARSRGSNQGHSSSRHQADSPRVSARSGSGGRGQSPDASGRSSNRRDRP\nRQPSPSQSSDSQVHSGVQVEGRRGQSSSANRRAGSSSGSGVQGASAGGLAADASRRSGAR\nQGQASAQGRAGSQGQAQGRVGSSADRQGRRGVSESQASDSEGHSDFSEGQAVGAHRQSGA\nGQRHEQRSSRGQHGSG\n\n\n>tr|A0A0A6YY62-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nPDASGRSSNRRDRPRQPSPSQSSDSQVHSGVQVEGRRGQSSSANRRAGSSSGSGVQGASA\nGGLAADASRRSGARQGQASAQGRAGSQGQAQGRVGSSADRQGRRGVSESQASDSEGHSDF\nSEGQAVGAHRQSGAGQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQQGHQHEQQRGHQH\nQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARSRGSNQGHSSSRHQADSPRVSA\nRSGSGGRGQSPDGSGRSSNRRDRPRQPSASQSSDSQVHSGVQVEAQRGQSSSANRRAGSS\nSGSGVQSAAASGQGGYESIFTAKHLDFNQSHSYYYY\n\n\n>tr|A0A0A6YX57-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nGQHGSGYYYEQEHSEEESDSQHQHGHQHEQQRGHQHQHQHQHEHEQPESGHRQQQSSGRG\nHQGAHQEQGRDSARSRGSNQGHSSSRHQADSPRVSARSGSGGRGQSPDASGRSSNRRDRP\nRQPSPSQSSDSQVHSGVQVEGRRGQSSSANRRAGSSSGSGVQGASAGGLAADASRRSGAR\nQGQASAQGRAGSQGQAQGRVGSSADRQGRRGVSGSQASDSEGHSDFSEGQAVGAHRQSGA\nGQRHEQRSSRGQHGSG\n\n\n</pre>"
    },
    "readme": "Name\n   - Mouse Protein Isoform sequences (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2019-01-23T17:21:05.921192\n\nModified on\n   - 2024-05-17T11:23:50.344Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse Protein Isoform sequences (UniProtKB) dataset contains Mus musculus [taxid:10090] protein fasta sequences for the mouse isoform accessions from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein isoform sequences\n   - fasta\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all mouse isoform accessions data from the triplestore containing triples from nt file and extracts it into a dataset in a fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-mus-musculus.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-mus-musculus.nt\n   Output Subdomain\n      Name: mouse_protein_allsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_allsequences.fasta\n      Name: mouse_protein_allsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_allsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"58262\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/mouse_protein_allsequences.fasta"
}