{
    "bcoid": "GLY_000030",
    "title": "Mouse Glycosyltransferases",
    "description": "The Mouse Glycosyltransferases dataset contains a list of Mus musculus [taxid:10090] Glycosyltransferases ...",
    "filename_list": "mouse_protein_glycosyltransferase.csv",
    "filename": "mouse_protein_glycosyltransferase.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Mus musculus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Glycosyltransferases"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "pathway/enzymes"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q6ZQ11-1...",
                "Mus musculus..."
            ],
            [
                "P70428-1...",
                "Mus musculus..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "species..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "species"
                },
                {
                    "type": "string",
                    "label": "status"
                },
                {
                    "type": "string",
                    "label": "gene_symbol"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_name"
                },
                {
                    "type": "string",
                    "label": "ec_number"
                },
                {
                    "type": "string",
                    "label": "brenda_ec_number"
                },
                {
                    "type": "string",
                    "label": "cazy_gt_family"
                },
                {
                    "type": "string",
                    "label": "interpro_id"
                },
                {
                    "type": "string",
                    "label": "pfam_ac"
                },
                {
                    "type": "string",
                    "label": "go_molecular_function"
                }
            ],
            [
                "Q6ZQ11-1",
                "Mus musculus (Mouse)",
                "reviewed",
                "Chsy1",
                "Chondroitin sulfate synthase 1 (EC 2.4.1.175) (EC 2.4.1.226) (Chondroitin glucuronyltransferase 1) (Chondroitin synthase 1) (ChSy-1) (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase 1) (N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase 1) (N-acetylgalactosaminyltransferase 1)",
                "2.4.1.175|2.4.1.226",
                "",
                "GT31|GT7|",
                "IPR008428|IPR029044",
                "PF05679",
                "glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity [GO:0047238]|metal ion binding [GO:0046872]|N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity [GO:0050510]|transferase activity, transferring glycosyl groups [GO:0016757]"
            ],
            [
                "P70428-1",
                "Mus musculus (Mouse)",
                "reviewed",
                "Ext2",
                "Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 2 homolog)",
                "2.4.1.224|2.4.1.225",
                "",
                "GT47|GT64|",
                "IPR004263|IPR027673|IPR040911|IPR015338|IPR029044",
                "PF03016|PF09258",
                "acetylglucosaminyltransferase activity [GO:0008375]|glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity [GO:0050508]|glucuronosyltransferase activity [GO:0015020]|heparan sulfate N-acetylglucosaminyltransferase activity [GO:0042328]|metal ion binding [GO:0046872]|N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity [GO:0050509]|protein heterodimerization activity [GO:0046982]|protein homodimerization activity [GO:0042803]|transferase activity, transferring glycosyl groups [GO:0016757]"
            ]
        ]
    },
    "readme": "Name\n   - Mouse Glycosyltransferases\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2019-01-23T17:21:05.897519\n\nModified on\n   - 2024-12-10T17:37:44.783Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Jeet Vora [jeetvora@gwu.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse Glycosyltransferases dataset contains a list of Mus musculus [taxid:10090] Glycosyltransferases derived from UniProtKB database using advanced search and other databases including CAZy, InterPro and Pfam. If you use this dataset please provide proper attribution to UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - GT\n   - gycosyltransferase\n   - CAZy\n\n   Pipeline Steps\n   - Step-1: The script maps and replaces the UniProtKb accession to the UniProtKB canonical accession\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: mouse_protein_glycosyltransferase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/mouse_protein_glycosyltransferase.csv\n      Name: mouse_protein_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_masterlist.csv\n   Output Subdomain\n      Name: mouse_protein_glycosyltransferase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_glycosyltransferase.csv\n      Name: mouse_protein_glycosyltransferase.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_glycosyltransferase.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"194\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/mouse_protein_glycosyltransferase.csv"
}