{
    "bcoid": "GLY_000025",
    "title": "Human Glycohydrolases",
    "description": "The Human Glycohydrolases dataset contains a list of Homo sapiens [taxid:9606] glycohydrolases derived ...",
    "filename_list": "human_protein_glycohydrolase.csv",
    "filename": "human_protein_glycohydrolase.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Homo sapiens"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Glycohydrolases"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "pathway/enzymes"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q13231-1...",
                "Homo sapiens..."
            ],
            [
                "P19961-1...",
                "Homo sapiens..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "species..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "species"
                },
                {
                    "type": "string",
                    "label": "status"
                },
                {
                    "type": "string",
                    "label": "gene_symbol"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_name"
                },
                {
                    "type": "string",
                    "label": "ec_number"
                },
                {
                    "type": "string",
                    "label": "brenda_ec_number"
                },
                {
                    "type": "string",
                    "label": "cazy_gh_family"
                },
                {
                    "type": "string",
                    "label": "interpro_id"
                },
                {
                    "type": "string",
                    "label": "pfam_ac"
                },
                {
                    "type": "string",
                    "label": "go_molecular_function"
                }
            ],
            [
                "Q13231-1",
                "Homo sapiens (Human)",
                "reviewed",
                "CHIT1",
                "Chitotriosidase-1 (EC 3.2.1.14) (Chitinase-1)",
                "3.2.1.14",
                "",
                "GH18",
                "IPR002557|IPR036508|IPR011583|IPR029070|IPR001223|IPR001579|IPR017853",
                "PF01607|PF00704",
                "chitinase activity [GO:0004568]|chitin binding [GO:0008061]|endochitinase activity [GO:0008843]|hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"
            ],
            [
                "P19961-1",
                "Homo sapiens (Human)",
                "reviewed",
                "AMY2B",
                "Alpha-amylase 2B (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase 2B) (Carcinoid alpha-amylase)",
                "3.2.1.1",
                "",
                "GH13",
                "IPR006048|IPR031319|IPR006046|IPR006047|IPR013780|IPR017853",
                "PF00128|PF02806",
                "alpha-amylase activity [GO:0004556]|alpha-amylase activity (releasing maltohexaose) [GO:0103025]|metal ion binding [GO:0046872]"
            ]
        ]
    },
    "readme": "Name\n   - Human Glycohydrolases\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2019-01-23T17:21:05.892318\n\nModified on\n   - 2024-12-10T16:54:17.429Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Jeet Vora [jeetvora@gwu.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The Human Glycohydrolases dataset contains a list of Homo sapiens [taxid:9606] glycohydrolases derived from UniProtKB database using advanced search and other databases including CAZy, InterPro and Pfam. If you use this dataset please provide proper attribution to UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - glycohydrolase\n   - glycosidase\n   - EC Number\n   - CAZy\n\n   Pipeline Steps\n   - Step-1: The script maps and replaces the UniProtKb accession to the UniProtKB canonical accession\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: human_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/human_protein_glycohydrolase.csv\n      Name: human_protein_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_protein_masterlist.csv\n   Output Subdomain\n      Name: human_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_protein_glycohydrolase.csv\n      Name: human_protein_glycohydrolase.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/human_protein_glycohydrolase.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"83\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/human_protein_glycohydrolase.csv"
}