{
    "bcoid": "GLY_001643",
    "title": "Zebrafish Lectin UniLectin3D Citations",
    "description": "The following dataset contains the citations provided as evidence for each lectin class associated with ...",
    "filename_list": "zebrafish_protein_citations_lectin_unilectin3d.csv",
    "filename": "zebrafish_protein_citations_lectin_unilectin3d.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Danio rerio"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "UniLectin3D"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q5CZR5-1...",
                "Structural b..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                }
            ],
            [
                "Q5CZR5-1",
                "Structural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein.",
                "EMBO reports",
                "2016-02",
                "Jia Ning, Liu Nan, Cheng Wang, Jiang Yong-Liang, Sun Hui, Chen Lan-Lan, Peng Junhui, Zhang Yonghui, Ding Yue-He, Zhang Zhi-Hui, Wang Xuejuan, Cai Gang, Wang Junfeng, Dong Meng-Qiu, Zhang Zhiyong, Wu Hui, Wang Hong-Wei, Chen Yuxing, Zhou Cong-Zhao",
                "protein_xref_pubmed",
                "26711430",
                "protein_xref_unilectin3D",
                "Q5CZR5"
            ]
        ]
    },
    "readme": "Name\n   - Zebrafish Lectin UniLectin3D Citations\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2025-10-20T14:18:06.520Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The following dataset contains the citations provided as evidence for each lectin class associated with Danio rerio [TaxID: 7955] provided by UniLectin3D. UniLectin3D (https://unilectin.unige.ch/unilectin3D/) is a manually curated database of three-dimensional structures of carbohydrate-binding proteins, known as lectins. It classifies lectins by organism origin, protein fold, and binding family, providing structural details on interactions with glycan ligands as part of the broader UniLectin portal.\n\nDescription Domain\n   Keywords\n   - UniLectin3D\n   - Lectins\n   - Citations\n\n   Pipeline Steps\n   - Step-1: The script extracts the PDB IDs from the input .tsv files and maps it to the corresponding UniProtKB accessions.\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: doi_citations.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/doi_citations.csv\n      Name: zebrafish_protein_lectin_unilectin3d.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_lectin_unilectin3d.csv\n   Output Subdomain\n      Name: zebrafish_protein_citations_lectin_unilectin3d.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_citations_lectin_unilectin3d.csv\n      Name: zebrafish_protein_citations_lectin_unilectin3d.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/zebrafish_protein_citations_lectin_unilectin3d.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/zebrafish_protein_citations_lectin_unilectin3d.csv"
}