{
    "bcoid": "GLY_001455",
    "title": "Mouse Glycan GlycomeAtlas Citations",
    "description": "The Mouse Glycan GlycomeAtlas Citations dataset comprises mouse [TaxID: 10090] tissue glycan citation ...",
    "filename_list": "mouse_proteoform_citations_glycosylation_sites_glycomeatlas.csv",
    "filename": "mouse_proteoform_citations_glycosylation_sites_glycomeatlas.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "GlycomeAtlas Citations"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Mus musculus"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "...",
                "Chapter 12 -..."
            ],
            [
                "...",
                "Chapter 12 -..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "isoform_mapping_notes"
                }
            ],
            [
                "",
                "Chapter 12 - Mouse and Human Glycomes",
                "Academic Press",
                "2010",
                "Simon J. North, Sara Chalabi, Mark Sutton-Smith, Anne Dell, Stuart M. Haslam",
                "glycan_xref_doi",
                "10.1016/B978-0-12-373600-0.00012-3",
                "glycan_xref_glycomeatlas",
                "G00318AV",
                "G00318AV",
                ""
            ],
            [
                "",
                "Chapter 12 - Mouse and Human Glycomes",
                "Academic Press",
                "2010",
                "Simon J. North, Sara Chalabi, Mark Sutton-Smith, Anne Dell, Stuart M. Haslam",
                "glycan_xref_doi",
                "10.1016/B978-0-12-373600-0.00012-3",
                "glycan_xref_glycomeatlas",
                "G00709CF",
                "G00709CF",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Mouse Glycan GlycomeAtlas Citations\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2023-03-14T20:00:08.127Z\n\nModified on\n   - 2025-03-04T15:53:49.509Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse Glycan GlycomeAtlas Citations dataset comprises mouse [TaxID: 10090] tissue glycan citation information for Mus musculus. This data is provided by the GlycomeAtlas from GlyCosmos which provides comprehensive information on glycan structures catalogued from various publications. More information can be found here: https://glycosmos.org/glycomeatlas.\n\nDescription Domain\n   Keywords\n   - GlycomeAtlas\n   - glycan\n   - proteoform\n\n   Pipeline Steps\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/all_blacklisted_pmids.csv\n      Name: doi_citations.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/doi_citations.csv\n   Output Subdomain\n      Name: mouse_proteoform_citations_glycosylation_sites_glycomeatlas.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_proteoform_citations_glycosylation_sites_glycomeatlas.csv\n      Name: mouse_proteoform_citations_glycosylation_sites_glycomeatlas.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_proteoform_citations_glycosylation_sites_glycomeatlas.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/mouse_proteoform_citations_glycosylation_sites_glycomeatlas.csv"
}