{
    "bcoid": "GLY_000971",
    "title": "Chicken Protein Canonical sequences (UniProtKB)",
    "description": "The Chicken Protein Canonical (UniProtKB) Sequences dataset contains Gallus gallus [taxid:9031] canonical ...",
    "filename_list": "chicken_protein_canonicalsequences.fasta",
    "filename": "chicken_protein_canonicalsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Gallus gallus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Canonical Protein fasta Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "sequence"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|A0A3Q3AHL1-1|A0A3Q3AHL1_CHICK Isoform 1 of PR/SET domain 16 OS=Gallus gallus OX=9031 GN=PRDM16 PE=4 SV=1 CANONICAL=A0A3Q3AHL1-1\nMRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF\nTPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMTVQRST\nLKETNFGWEQILTDPEVTSQEGSIKKIADDLGNEKFCIDANQSGAGTWLKYIRAACSCAE\nQNLAVCHVNDQIYYKVIKEIEPGEELLVCAKEGSYSLGNMAPSMEEEHTFRCEDCDELFQ\nSKLDLRRHKKYACSAVSSLYDTLNDEIKQEGLGDGQVFECKDCERMFPNKYSLEQHMVIH\nTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA\nRAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI\nKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFAPGLPLTPTSMMDKSKPSPNLNHTSL\nGFNDYFPSRPHPGGLPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTQ\nDAKLPSPLGNPALPLISAVSNSNQAASAEEKCESSLENSYLEKLKARNSDMSDGSDFEDV\nNTTTGTDLDTTTGTGSDLDSDAESDRDKAKDKSKQMESKPDFVSSSVSASSTNNTSEIPL\nFYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF\nQFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILP\nPPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP\nQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL\nESFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR\nHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK\nKHEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQA\nSTLADKRPEMQDIDSNSQCHGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETVSPTAEP\nRGTYEDEEDEEPTSLTMSFDHTRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKD\nVFNSTLDSETIKQTLYRQAKNQAYAMMLSLSENAPLHTSSQNSLGAWLDMAGAASESGTF\nNPINHL\n\n\n>tr|A0A8V0X519-1|A0A8V0X519_CHICK Isoform 1 of AP complex subunit beta OS=Gallus gallus OX=9031 GN=AP1B1 PE=1 SV=1 CANONICAL=A0A8V0X519-1\nMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT\nDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE\nYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA\nVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDREAQSI\nCERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY\nVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE\nYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK\nYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV\nQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV\nVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGSRGVVHKSLPPRTGSS\nESAESPDAAPSAGQAAEQPAVIPAQGDLLGDLLNLDLGPPVSGPPLAASSVQMGAVDLLG\nGGLDSLMGDESEGLRSDVGGSPAMGGSGFTAPGPAAPAAMGAPLGSGLGDLFDLTGGVGT\nLSGSYVAPKTVWLPAMKAKGLEISGTFSRQVGSICMDLVLTNKALQVMSDFAIQFNRNSF\nGLAPAAPLQVHAPLAPNQSVEISLPLNTVGSVMKMDPLNNLQVAVKNNIDVFYFSTLYPL\nHILFVEDGKMERQMFLATWKDIPNENEAQFQIKDCSLNADAVSSKLQGSNIFTIAKRNVE\nGQDMLYQSLKLTNGIWVLAELRIQPSNPSFTDLELSLKCRAPEVSQYVYQAYDAILKN\n\n\n>tr|A0A8V0X4Z8-1|A0A8V0X4Z8_CHICK Isoform 1 of Dedicator of cytokinesis protein 4 OS=Gallus gallus OX=9031 GN=DOCK4 PE=3 SV=1 CANONICAL=A0A8V0X4Z8-1\nMWIPTEHEKYGVVIAGFRGTVPHGLSLEIGDTVQILEKCDGWYRGFALKNPNVKGIFPSN\nYIHLKNACVKNKGQFEMVIPTEDSVITEMTSTLRDWGTMWKQLYVRNEGDLFHRLWHIMN\nEILDLRRQVLVGHLTHDRMKDVKRHITARLDWGNEQLGLDLVPRKEYAMVDPEEISITEL\nYRLMEHRHRKKDTPVPASSHHLFVQMKSLMCSNLGEELEVIFSLFDSKENRPISERFFLR\nLNRNGLPKCPEKPERHCSLFVDLSSSELRKDIYITVHIIRIGRMGAGEKKNACNVQYRRP\nFGCAVLSIADLLAGDSKDDLILKVYMCNTESDWYQIHENIIKKLNARYNLTGSNAGLAVS\nLQLLHGDIEQIRREYTSMFTHGVSITRKLGFSNIIMPGEMRNDLYITVERGEFEKGGKSV\nARNVEVTMHVVDSSGQILRDFISFGSGEPPASEYHSFVLYHNNGPRWAELLKLPIPVDKF\nRGAHIRCEFRHCSTKEKGEKKLFGFSFVPLMQENGRTLPDGTHELIVHKCEENANLQDSS\nRYLKLPFSKGIFLANNSQAVKTTKESFWITSFLCSTKLTQNGDMLDLLKWRTHPDKIAGC\nLSKLKEIDGSEIVKFLQDTLDTLFGILDENSQKYGSKVFDCLVHIINLLQDSKFHHFKPV\nMDTYIESHFAGALAYRDLIKVLKWHIDRVTEVELHEHIQEVLKAQEYIFKYIVQSRRLFS\nIATGGQNEEEFRCCIQELLMSVRFFLSQESKGASALCQLQAVFLSSFPSVYSELLKLFDV\nREVANLVHDALGSLPTVMQGDESLQAVKLQSIGKTVESHLYTNPDSRYILLPVVLHHLHM\nHLQEQKDLIMCARILSNIFCLIKKNSSEKSVLEEIDVIVSSLLDILLRTILEITSRPQPS\nGSAMRLQFQDVTGEFVSCLLSLLRQMTDRHYQQLLDSFNTKEDLRDFLLQIFTVFRILIR\nPEMFPKDWTVMRLVANNVIITTVLYLSDALRKNFLNENFDYKIWDSYFFLAVIFINQLCL\nQLEMFTPSKKKKVLEKYGDMRVTMGCEIFSMWQNLGEHKLHFIPALIGPFLEVTLIPQPD\nLRNVMIPIFHDMMDWEQRRSGNFKQVEAKLIDKLDSLMSEGKGDETYRELFNSIIPLFGP\nYPSLLKKIERETWRESGVSLIATVTRLMERLLDYRDCMKMGEVDGKKIGCTVSLLNFYKT\nELNKEEMYIRYIHKLYDLHLKAQNFTEAAYTLLLYDELLEWSDRPLREFLNYPMQTEWQR\nKEYLHLTIIQNFDRGKCWENGIILCRKIAEQYESYYDYRNLSKMRMMEASLYDKIMDQQR\nLEPEFFRVGFYGKKFPFFLRNKEFVCRGHDYERLEAFQQRMLNEFPHAIAMQHANQPDET\nIFQAEAQYLQIYAVTPIPENQEVLQRDGIPDNIKSFYKVNHIWRFRYDRPFHKGTKDKEN\nEFKSLWVERTTLILVQSLPGISRWFEVEKREVVEMSPLENAIEVLENKNQQLRTLISQCQ\nTRQMQNINPLTMCLNGVIDAAVNGGVTRYQEAFFVKEYVLNHPEDGEKITRLRELMLEQA\nQILEFGLAVHEKFVPQDMRPLHKKLVDQFFVMKSSLGIQEYSACVQASPIHFPNGSPRVC\nRNSIPVSMSPDGARVIPRRSPLSYPAVNRYSSSSLSSQASAEVSNITGQSESSDEVFNMQ\nPSPSTSSLSSTHSASPNVTSSAPSSARASPLLSDKHKHSRENSCLSPRERPCSAIYPTSL\nEASQTANSCFAKWNAASVPHSTRDSIREAEEHVCPASTLSETRLAAKSPNLSLPSVSQER\nRMLFNHIGDGALPRSDSNLPGPDKAVNATPSSWSLDSGKEARNTSDSGKLISPPVPPRPA\nQTASPARHIASVSPSPAGRSPMKGSVQSFTPSPVEYHSSGLISNSPVLSGSYSSGISSLS\nRCSTSETSGFESQGSEPPATVPSYSVPEEPVRKESKTPPPYSVYERTLKRPIPLPHSLSI\nPPTDPPALPPKPQLGRPSNAESSSRRTEPAPRPRPLPRKVSQL\n\n\n>tr|A0A3Q2UI62-1|A0A3Q2UI62_CHICK Isoform 1 of Cyclin-dependent kinase 10 OS=Gallus gallus OX=9031 GN=CDK10 PE=3 SV=1 CANONICAL=A0A3Q2UI62-1\nMADGDRAEAASAESELEPLRFQRLWGEGYFEVPASERLGKCRSVKEFEKLNRIGEGTYGI\nVYRARDTVTDETVALKKVRMDNEKEGMPVSSLREITLLLELQHPNIVELKEVVVGNHLES\nIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHERYIIHRDLKVSNLLMT\nDKGCVKIADFGLARTYGMPPQPMTPKVVTLWYRAPELLLGVTTQTTSIDMWAVGCILAEL\nLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLVSQYTLRKQPYNNLKHKFPWL\nSEAGLRLLNFLFMYDPKKRATAKDSLDSSYFKEKPLRKYIPHQPGLQCLASADLSLCLPS\nLRARAHAHLPPPSQQACSQHQHGDRDPGKACQALSPVQKEEVQELKQGWPLPGLGTGSCP\nAAGQARSSPR\n\n\n>tr|A0A3Q2UI67-1|A0A3Q2UI67_CHICK Isoform 1 of Protein phosphatase 1 regulatory subunit OS=Gallus gallus OX=9031 GN=PPP1R12B PE=1 SV=1 CANONICAL=A0A3Q2UI67-1\nMSEPEHLGGKRAESARLRRAEQLRRWKGSLTEQEPVAAGGGRGRHRGAGGSRVRFEEGAV\nFLAACSSGDTEEVKRLLGRGARINTTNVDGLTALHQACIDENLDMVKFLVENGANVNQQD\nNEGWTPLHAVASCGYLNIAEYLISHGANVAAVNSEGEVPSDIAEEAAMKDLLLEQVKKQG\nVDLDLARKEEEQQMLQDARQWLNSGRIEDVKQPQTGATALHVASAKGYSEVMRLLIQAGF\nNLNVQDNDGWTPLHAAAHWGVKEACSILAEALCDMDVRNKLGQTPFDVADEGLVEHLEML\nQKKQTVLRSEKETRNKLIEADMNGKPQSGVFMNKEKILYEEDRLKTTEMEEENKDSSSSS\nSEEEEEAEEDEVSESDAEKESERKEESFANHSSHETRPSITEQIPPPESNSFTASARRFS\nWLNRSDEQKDESPSSWRLGLRKTGSHNTLSEVTATREAQRDKAASIYRSSSTPRISALLD\nSKEKDKENKSYLATIAPRRLSSASDIEEKENRESAANIVRSGSYTRQPWRDESKGNEAPH\nSGAPPTYVSTYLKSASFGRSSDLSSPYISASRNTSLATSPTAIGSSTSLSTPWQPASACP\nTPLGANTSASTRQYTRAPFRQQTDSAVEKSTEGLSASTPLGVITNRAVRGSANGTASAGA\nASTTGKDCSAEEARERRRSYLTPVRDEEAESLRKARSRQARQTRRSTQGVTLTDLQEAER\nTFSRSRAERQAQEQQSEKAESAEPAEDSSERQETRTRWSRNTDEETVYRRLRCPVQADKP\nTTPVSPSTSAPLLYTSSYLTRTNKYLGLDSGNPADFRGAATEMEKNECEDADVDDRSANK\nQSIRERRRPKERRRGTGIIFSTKDDDDDIDGNEEVKETRHERLSRLEAATTPATSDSYSD\nRASSRSSAYSRRENRLAALSSRAEEESNRDYKKLYESALSENQKLKSKLQEAQLELADIK\nSKLEKAAQQKHEKTSDRSSMLEMEKREKRALERKLSEMEEEMKILTELKSDNQRLKDENG\nALIRVISKLSK\n\n\n>tr|A0A3Q2UIC2-1|A0A3Q2UIC2_CHICK Isoform 1 of ribonuclease H OS=Gallus gallus OX=9031 GN= PE=3 SV=1 CANONICAL=A0A3Q2UIC2-1\nMALVDTGAETSIIYGDPNQFSGSKAMIGGFGGQMIPVTQTWLKLGVGRLPPREYKVSIAP\nIPEYILGIDILSGLTLQTTVGEFRLRERCISIRAVQAIIRGHAEIEPICLPQPRRITNTK\nQYRLPGGQQEITKTVQELERVGIIRPAHSPYNSPIWPVRKPDGTWRMTVDYRELNKVTPP\nIHAAVPNIASLMDTLSREIETYHCVLDLANAFFSIPIAKESQDQFAFTWEGRQWTFQVLP\nQGYVHSPTFCHNLVASDLANWNKPSTVKMFHYIDDLMLTSDSIEALEKTVPSLITYLQEK\nGWAINPQKVQGPGLSVKFLGVVWSGKTKVLPSAIIDKIQAFPVPTKPKQLQEFLGILGYW\nRSFIPHLAQLLKPLYRLTKKGQVWDWGRTEQEAFQQAKIAVKQAQALGIFDPTLPAELDV\nHVTQEGFGWGLWQRQGSVRIPIGFWSQIWHGAEERYSMVEKQLLATYSALQAVEPITQTA\nEVIVKTTLPIQGWVKDLTHIPKTGVAQSQTVARWVAYLSQRSRLSSSPLKEELQKILGPV\nTYHSETPEEIVVTCPEKSPVQEGKYPIPEDAWYTDGSSRGNPSRWRAVAYHPSTETIWFE\nEGDGQSSQWAELRAVWMVITQEPGNSALNICTDSWAVYRGLTLWIAQWATQDWTIHARPI\nWGKDMWVDIWNVVRHRTVRAYHVSGHQPLQSPGNDEADTLARVRWLGNTPSEDIAHWLHR\nKLRHAGQKTMWAAAKAWGLPIQLPDIVQACQDCDACSRMRPRPLPETTAHLARGHNPLQR\nWQIDYIGPLPRSEGARYALTCVDTASGLMQAYPVAKANQANTIKALTRLMASYGTPEVIE\nSDQGTHFTGATVQKWAEDNNIEWRFHLPYNPTGAGLIERYNGILKAALKADSQSLQGWTK\nRLYETLRDLNERPRDGRPSALKMLQTTWASPLRIQITSKDTSLKPQVGTMNNLLLPAPDD\nLEPGRHKVKWPWKVQAGPKWCGLLAPWGRLLEVGGSVNPSVIGVWPTEVIVDTPVFIARG\nTLIMSMWQIRTPPLVPDIVIQSQISGQRVWYRRPGRAPIQAEVLTQDRNTACILPWRADL\nPLLVPIKHLFYSP\n\n\n>tr|A0A8V0XR87-1|A0A3Q2UIF5_CHICK Isoform 1 of Sodium/potassium-transporting ATPase subunit beta-1-interacting protein OS=Gallus gallus OX=9031 GN=NKAIN2 PE=3 SV=1 CANONICAL=A0A8V0XR87-1\nMGYCSGRCTLVAVCGAQLVSVLERQIFDFLGYQWAPILANFIHIIVVILGLFGTIQYRPR\nYITGYAVWLILWISWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCTVTSV\nTPAPDWAPEDHRYITVSGCFLEYQYIEVAHSSLQIFLALAGFIYACYVVKCITEEEDSFD\nFIGGFDSYGYQGPQKTSHLQLQPMYMSK\n\n\n>tr|A0A1D5NV46-1|A0A3Q2UJ00_CHICK Isoform 1 of glycerol kinase OS=Gallus gallus OX=9031 GN=GK2 PE=1 SV=1 CANONICAL=A0A1D5NV46-1\nMAASDRMVLGPLVGSIDQGTSSSRFLVFNAKTAELLSHHQVEIQQKFPKEGWVEQDPKEI\nLRSVHECVERTCEKLQQLNIDITNIKAIGVSNQRETTVVWDKTTGEPLYNAIVWLDLRTQ\nSTVERLLKRIPGNNKSFFKFRTGLPLSTYFSAVKLRWLLDNVEEIRQAVDDGRAMFGTID\nSWLIWCLTGGKNGGVHCTDVTNASRTMLFNIHSLDWDPELCQFFDIPMEILPKVRSSSEI\nYGLMKICPSLKSGALTGVPISGCLGDQSAALVGQMCFQDGQAKNTYGTGCFLLCNTGQKS\nVFSDHGLLTTIAYKLGRDKPVCYALEGSVAIAGAVVRWLRDNLGIVKTSQEVEKLAAEAG\nTSYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKNHIAFAALEAVCFQTREILDAMNK\nDCGIPLSQLQVDGGMTNNKVLMQLQSDILCIPVVKPSMPETTALGAAMAAGAAEGVGIWS\nLNPGDLTAVTCERFEPQINPEESEYRYARWKKAVMKSMGWETSEAPSNGDTSIFCSLPLG\nFFIMSSMIMLIGAKYVSGTDK\n\n\n>tr|A0A8V0XG78-1|A0A3Q2UJ15_CHICK Isoform 1 of Neuronal membrane glycoprotein M6-a OS=Gallus gallus OX=9031 GN=GPM6A PE=3 SV=1 CANONICAL=A0A8V0XG78-1\nMLQLCCFSLHGFSGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQ\nTYFEMTRTAGDVIDVFTMIDIFKYVIYGVAAAFFVYGILLMVEGFFTTGAIKDLYGDFKI\nTTCGRCVSAWFIMLTYIFMLAWLGVTAFTSLPVYMYFNLWTICRNATLVDGTNLCLDLRQ\nYGIVTIGEEKKVCTTSESFIKMCDSNELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANW\nAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT\n\n\n</pre>"
    },
    "readme": "Name\n   - Chicken Protein Canonical sequences (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2024-05-21T14:22:39.804Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Chicken Protein Canonical (UniProtKB) Sequences dataset contains Gallus gallus [taxid:9031] canonical protein fasta sequences from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein sequence\n   - fasta\n   - UniProtKB canonical accessions\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all chicken canonical accessions data from the triplestore containing triples from nt file and extracts it into a dataset as fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-gallus-gallus.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-gallus-gallus.nt\n   Output Subdomain\n      Name: chicken_protein_canonicalsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/chicken_protein_canonicalsequences.fasta\n      Name: chicken_protein_canonicalsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/chicken_protein_canonicalsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"17844\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/chicken_protein_canonicalsequences.fasta"
}