{
    "bcoid": "GLY_000860",
    "title": "Dicty Protein Submitted Names (UniProtKB)",
    "description": "The Dicty Protein Submitted Names (UniProtKB) dataset contains UniProtKB submitted names for Dictyostelium ...",
    "filename_list": "dicty_protein_submittednames.csv",
    "filename": "dicty_protein_submittednames.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Dictyostelium discoideum"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Protein Submitted Names"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "names"
        ]
    },
    "minitable": {
        "content": [
            [
                "Q54DB2-1...",
                "Proteasome a..."
            ],
            [
                "Q54DE7-1...",
                "Patatin fami..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "submitted_na..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "submitted_name_full"
                },
                {
                    "type": "string",
                    "label": "submitted_name_short"
                },
                {
                    "type": "string",
                    "label": "ec_name"
                }
            ],
            [
                "Q54DB2-1",
                "Proteasome activator complex subunit 4",
                "",
                ""
            ],
            [
                "Q54DE7-1",
                "Patatin family protein",
                "",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Dicty Protein Submitted Names (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - \n\nModified on\n   - 2024-05-17T11:24:16.058Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Dicty Protein Submitted Names (UniProtKB) dataset contains UniProtKB submitted names for Dictyostelium discoideum [taxid:44689] UniProtKB/TrEMBL proteins accessions. In UniProt, UniProtKB/TrEMBL entries usually have 'Submitted name' which may later be improved by automatic annotation procedures but if not, it remains as provided by the submitter until the entry is manually annotated and integrated to UniProtKB/Swiss-Prot. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein submitted name\n   - protein name\n   - UniProtKB\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB submitted names for protein accessions from the triplestore containing triples from nt file and extracts the recommended names into csv dataset file\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-dictyostelium-discoideum.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-dictyostelium-discoideum.nt\n   Output Subdomain\n      Name: dicty_protein_submittednames.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/dicty_protein_submittednames.csv\n      Name: dicty_protein_submittednames.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/dicty_protein_submittednames.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"4872\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/dicty_protein_submittednames.csv"
}