{
    "bcoid": "GLY_000012",
    "title": "Mouse Protein Canonical sequences (UniProtKB)",
    "description": "The Mouse Protein Canonical (UniProtKB) Sequences dataset contains Mus musculus [taxid:10090] protein ...",
    "filename_list": "mouse_protein_canonicalsequences.fasta",
    "filename": "mouse_protein_canonicalsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Mus musculus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Canonical Protein fasta Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "sequence"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>sp|Q8VCK6-1|FFAR2_MOUSE Isoform 1 of Free fatty acid receptor 2 OS=Mus musculus OX=10090 GN=Ffar2 PE=1 SV=1 CANONICAL=Q8VCK6-1\nMTPDWHSSLILTAYILIFLTGLPANLLALRAFMGRVRQPQPAPVHILLLNLTLADLLLLL\nLLPFRIVEAASNFRWYLPKIVCALTGFGFYSSIYCSTWLLAGISMERYLGVAFPVQYKLS\nRRPLYGVIAALVAWIMSFGHCTIVIIVQYLNSTEQVGTENQITCYENFTQEQLDVVLPVR\nLELCLVLFFVPMAVTIFCYWRFVWIMLTQPHVGAQRRRRAVGLAVVTLLNFLVCFGPYNM\nSHLVGFYLRQSPSWRVEAVVFSSLNASLDPLLFYFSSSVVRRAFGKGLLLIRNPASSMLG\nRGAKETVEGTKMDRGGSQAEGVQSSEFVTE\n\n\n>sp|P11088-1|FILA_MOUSE Isoform 1 of Filaggrin OS=Mus musculus OX=10090 GN=Flg PE=1 SV=1 CANONICAL=P11088-1\nPDGSGRSSNRRDRPRQLSPSQSSDSQVHSGVQVEGRRGHSSSANRRAGSSSGSGVQGASA\nGGLAADASRRSGARQGQASAQGRAGSQGQAQGRVSSSADRQGRRGVSESRASDSEGHSDF\nSEGQAVGAHRQSGAGQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQQRGHQH\nQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPRGSNQGHSSSRHQADSPRVSA\nRSGSGGRGQSPDASGRSSNRRDRPRQPSPSQSSDSQVHSGVQVEAQRGQSSSANRRAGSS\nSGSGVQGAAASGQGGYESIFTAKHLDFNQSHSYYYY\n\n\n>sp|P20489-1|FCERA_MOUSE Isoform 1 of High affinity immunoglobulin epsilon receptor subunit alpha OS=Mus musculus OX=10090 GN=Fcer1a PE=1 SV=2 CANONICAL=P20489-1\nMVTGRSAQLCLALLFMSLDVILTATEKSVLTLDPPWIRIFTGEKVTLSCYGNNHLQMNST\nTKWIHNGTVSEVNSSHLVIVSATVQDSGKYICQKQGLFKSKPVYLNVTQDWLLLQTSADM\nVLVHGSFDIRCHGWKNWNVRKVIYYRNDHAFNYSYESPVSIREATLNDSGTYHCKGYLRQ\nVKYESDKFRIAVVKAYKCKYYWLQLIFPLLVAILFAVDTGLLLSTEEQFKSVLEIQKTGK\nYKKVETELLT\n\n\n>sp|Q71KU9-1|FGL1_MOUSE Isoform 1 of Fibrinogen-like protein 1 OS=Mus musculus OX=10090 GN=Fgl1 PE=1 SV=2 CANONICAL=Q71KU9-1\nMGKIYSFVLVAIALMMGREGWALESESCLREQVRLRAQVHQLETRVKQQQTMIAQLLHEK\nEVQFLDKGSENSFIDLGGKRQYADCSEIYNDGFKQSGFYKIKPLQSLAEFSVYCDMSDGG\nGWTVIQRRSDGSENFNRGWNDYENGFGNFVQNNGEYWLGNKNINLLTIQGDYTLKIDLTD\nFEKNSSFAQYQSFKVGDKKSFYELNIGEYSGTAGDSLSGTFHPEVQWWASHQRMKFSTWD\nRDNDNYQGNCAEEEQSGWWFNRCHSANLNGVYYRGSYRAETDNGVVWYTWHGWWYSLKSV\nVMKIRPSDFIPNII\n\n\n>sp|Q9CRA8-1|EXOS5_MOUSE Isoform 1 of Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1 CANONICAL=Q9CRA8-1\nMEGAKRADANLLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG\nPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVL\nQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGNLVLDPTTKQEKEARAI\nLTFALDSAEQKLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSKS\n\n\n>sp|O35622-1|FGF15_MOUSE Isoform 1 of Fibroblast growth factor 15 OS=Mus musculus OX=10090 GN=Fgf15 PE=1 SV=1 CANONICAL=O35622-1\nMARKWNGRAVARALVLATLWLAVSGRPLAQQSQSVSDEDPLFLYGWGKITRLQYLYSAGP\nYVSNCFLRIRSDGSVDCEEDQNERNLLEFRAVALKTIAIKDVSSVRYLCMSADGKIYGLI\nRYSEEDCTFREEMDCLGYNQYRSMKHHLHIIFIQAKPREQLQDQKPSNFIPVFHRSFFET\nGDQLRSKMFSLPLESDSMDPFRMVEDVDHLVKSPSFQK\n\n\n>sp|Q9D0M0-1|EXOS7_MOUSE Isoform 1 of Exosome complex exonuclease RRP42 OS=Mus musculus OX=10090 GN=Exosc7 PE=1 SV=2 CANONICAL=Q9D0M0-1\nMASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV\nGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD\nLRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGAKDI\nELSDDPYDCIRLSVENVPCIVTLCKIGCRHVVDATLQEEACSLASLLVSVTSKGVVTCMR\nKVGKGSLDPESIFEMMESSKRVGKVLHVSLQSLLHKEESLGPKRPRVGFLG\n\n\n>sp|Q9QZN0-1|FBX15_MOUSE Isoform 1 of F-box only protein 15 OS=Mus musculus OX=10090 GN=Fbxo15 PE=1 SV=2 CANONICAL=Q9QZN0-1\nMPSEILVKILSYLDAVTLVCIGCVSRRFYHLADDNLIWVRKYAAAFRSKRSRWKATSVEE\nTATSLSLLSVWDKEDGYWKKEYITKQISSVRAALTNSLSPVKRRTSLPSKTKESLRISGL\nGWTIILREASGKEHIMQHSNLSVNDNSVTVFWHDKNWPHVDTLSTLDLYGATPIFMEQYK\nGPNTSCPRWLSLIEKYDLSNLRKSAMIGCDRHVRVFCVNPGLLVGLWQENGGLAFVMANI\nHSHGLFERSIMGSDTIPYTLPPDTTFVDNYPDSMTFYGDKGFQLHIDIHGSKTYFLCSTF\nHNLFCRRAGINNGYVKFLMINLKNNREHLPLVGKVGLEWRTDCLNGRIESCIVVDMTLLD\nEDKKPIWYVSSPVCLRSACLPDFPQPAYSFEYMDSVGGVCADLGWFENTDEYFIVRLDIY\nLSVAKLQQWFGRQ\n\n\n>sp|A2A870-1|FBF1_MOUSE Isoform 1 of Fas-binding factor 1 OS=Mus musculus OX=10090 GN=Fbf1 PE=1 SV=1 CANONICAL=A2A870-1\nMTGQCCEELQRAPKPRMALRTKKGLKGSIEDVLGDLLGDDTTPPEKPAEPASHAKDTASS\nPQWQASKAKFLPKDSVEGLAGADAEASSVSDADPQVFLQNMKDLDSMDDDLFGRMKSHQP\nSGKGAAKGPGKEGPSNHKPAGTLTANEKGYTMPTKKPPPSSSKTGLQYKKFSFEDFEDPL\nAGLLSDEEEETATKLPAVERKPAPKSPGAAAGQGPSVPLTPGDTPIRKKELLFDEGDDIM\nTTLGFEDSPKAERKKTGDQEGPLPARSKLDELLGRGTAAKLLTRPGTGERREFQLDKKYQ\nKMGGEESVPARDKEDSWDDETLTFGAYKPTVASSEGRQSRRQSVSRFLGEGGPDPKGESL\nGFKQSSPPASSPIHPRKGGADWLGLKDNDLDLLSPSPVQKAQQEDSPMTPSLLPPTNQPS\nAPEPQSAPTGLPSAAKPPAKGARPSLKASQASSPKASEEKEDDWLSHVISQKKSQNLARE\nERAGPPKDLASLGSLGQTPSGSLPVAQVLEQAPAGEASKPTTQGMAAVRPGVTGSSMSWS\nQATTVLPVDDPKKGAASASGDFSSREPAVYIPHSQEPTGLSVPIQTLLPESMMQSLLPGS\nGYQKQLLAAQGQLQSSTAQLQVELLQSQTKLSELEAQVRKLELERAQHRMLLESLQQRHQ\nADLELIEDAHRSRIKVLETSYQQREEQLRREKEVLSAQHASYCREAEQARAELVAQHQRQ\nMAMAEQERDQEVARLRELQQASILEMRKDHEHQLQRLKMLKDQEIDAVTSATSHTRSLNG\nIIEQMEKFSSSLNTLSSRVEASHLTTSQQRELGIRQQDEQLRALQERLGRQQRDMEEERN\nRLQEVIGKMEVRLSEQSRLLEQERWRVAAEKTKAESAQRTLEEQRKIMVQQIAMEREELE\nRAKSALLEEQKSVMNKCGEERRRLAAEWAEYFTQQKLSKERAEREAERAMHADSQREGTI\nISLTKEQAELTVRACELRAKEEKLLAEREALERERQELRLEKDRLHKASLRLQARAQEVE\nHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQRQQEWLRQQEQRVHQEHLSLAQQRL\nQLDRVRQEVPASLPGLPPRVQGPAASSRDAVQAPASSSPQCSQPAAAQVPTHLLAKLLLL\nKHTAEEDHDFLENEQFFLETLKKAPYNMAYHSA\n\n\n</pre>"
    },
    "readme": "Name\n   - Mouse Protein Canonical sequences (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2019-01-23T17:21:05.878935\n\nModified on\n   - 2024-05-17T11:23:49.409Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse Protein Canonical (UniProtKB) Sequences dataset contains Mus musculus [taxid:10090] protein canonical fasta sequences from the UniProtKB database. The dataset is contributed by EMBL-EBI-UniProtKB and processed by GlyGen. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein sequence\n   - fasta\n   - canonical accessions\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all mouse canonical accessions data from the triplestore containing triples from nt file and extracts it into a dataset as fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-mus-musculus.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-mus-musculus.nt\n   Output Subdomain\n      Name: mouse_protein_canonicalsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_canonicalsequences.fasta\n      Name: mouse_protein_canonicalsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/mouse_protein_canonicalsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"20783\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/mouse_protein_canonicalsequences.fasta"
}