Started time stamp ... Fri Apr 15 18:40:18 EDT 2022 2022-04-15T18:40:18.441-0400 preparing collections to restore from 2022-04-15T18:40:19.028-0400 reading metadata for glydb.c_publication from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:19.058-0400 restoring glydb.c_publication from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:20.418-0400 reading metadata for glydb.c_list from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:20.452-0400 restoring glydb.c_list from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:21.311-0400 glydb.c_publication 47.8MB 2022-04-15T18:40:21.311-0400 glydb.c_list 19.4MB 2022-04-15T18:40:21.311-0400 2022-04-15T18:40:21.673-0400 reading metadata for glydb.c_idtrack from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:21.701-0400 restoring glydb.c_idtrack from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:23.330-0400 reading metadata for glydb.c_site from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:23.360-0400 restoring glydb.c_site from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:24.311-0400 glydb.c_publication 62.9MB 2022-04-15T18:40:24.311-0400 glydb.c_list 48.0MB 2022-04-15T18:40:24.311-0400 glydb.c_idtrack 16.0MB 2022-04-15T18:40:24.311-0400 glydb.c_site 19.5MB 2022-04-15T18:40:24.311-0400 2022-04-15T18:40:25.877-0400 glydb.c_idtrack 22.7MB 2022-04-15T18:40:25.877-0400 no indexes to restore 2022-04-15T18:40:25.877-0400 finished restoring glydb.c_idtrack (99986 documents) 2022-04-15T18:40:27.311-0400 glydb.c_publication 127MB 2022-04-15T18:40:27.311-0400 glydb.c_list 80.0MB 2022-04-15T18:40:27.311-0400 glydb.c_site 64.3MB 2022-04-15T18:40:27.311-0400 2022-04-15T18:40:28.239-0400 reading metadata for glydb.c_alignment from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:28.266-0400 restoring glydb.c_alignment from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:30.311-0400 glydb.c_publication 142MB 2022-04-15T18:40:30.311-0400 glydb.c_list 128MB 2022-04-15T18:40:30.311-0400 glydb.c_site 112MB 2022-04-15T18:40:30.312-0400 glydb.c_alignment 27.9MB 2022-04-15T18:40:30.312-0400 2022-04-15T18:40:33.311-0400 glydb.c_publication 190MB 2022-04-15T18:40:33.311-0400 glydb.c_list 160MB 2022-04-15T18:40:33.311-0400 glydb.c_site 144MB 2022-04-15T18:40:33.311-0400 glydb.c_alignment 104MB 2022-04-15T18:40:33.311-0400 2022-04-15T18:40:36.311-0400 glydb.c_publication 222MB 2022-04-15T18:40:36.311-0400 glydb.c_list 208MB 2022-04-15T18:40:36.311-0400 glydb.c_site 197MB 2022-04-15T18:40:36.311-0400 glydb.c_alignment 112MB 2022-04-15T18:40:36.311-0400 2022-04-15T18:40:39.311-0400 glydb.c_publication 254MB 2022-04-15T18:40:39.311-0400 glydb.c_list 240MB 2022-04-15T18:40:39.311-0400 glydb.c_site 250MB 2022-04-15T18:40:39.311-0400 glydb.c_alignment 160MB 2022-04-15T18:40:39.311-0400 2022-04-15T18:40:42.311-0400 glydb.c_publication 302MB 2022-04-15T18:40:42.311-0400 glydb.c_list 272MB 2022-04-15T18:40:42.311-0400 glydb.c_site 304MB 2022-04-15T18:40:42.311-0400 glydb.c_alignment 176MB 2022-04-15T18:40:42.311-0400 2022-04-15T18:40:45.311-0400 glydb.c_publication 333MB 2022-04-15T18:40:45.311-0400 glydb.c_list 318MB 2022-04-15T18:40:45.311-0400 glydb.c_site 336MB 2022-04-15T18:40:45.311-0400 glydb.c_alignment 224MB 2022-04-15T18:40:45.311-0400 2022-04-15T18:40:48.311-0400 glydb.c_publication 392MB 2022-04-15T18:40:48.311-0400 glydb.c_list 368MB 2022-04-15T18:40:48.311-0400 glydb.c_site 352MB 2022-04-15T18:40:48.311-0400 glydb.c_alignment 280MB 2022-04-15T18:40:48.311-0400 2022-04-15T18:40:50.424-0400 glydb.c_list 397MB 2022-04-15T18:40:50.424-0400 no indexes to restore 2022-04-15T18:40:50.424-0400 finished restoring glydb.c_list (482770 documents) 2022-04-15T18:40:51.312-0400 glydb.c_publication 445MB 2022-04-15T18:40:51.312-0400 glydb.c_site 425MB 2022-04-15T18:40:51.312-0400 glydb.c_alignment 280MB 2022-04-15T18:40:51.312-0400 2022-04-15T18:40:51.430-0400 glydb.c_alignment 280MB 2022-04-15T18:40:51.430-0400 no indexes to restore 2022-04-15T18:40:51.430-0400 finished restoring glydb.c_alignment (69296 documents) 2022-04-15T18:40:52.742-0400 reading metadata for glydb.c_protein from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:52.854-0400 restoring glydb.c_protein from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:54.312-0400 glydb.c_publication 487MB 2022-04-15T18:40:54.312-0400 glydb.c_site 464MB 2022-04-15T18:40:54.312-0400 glydb.c_protein 31.7MB 2022-04-15T18:40:54.312-0400 2022-04-15T18:40:56.800-0400 reading metadata for glydb.c_cluster from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:56.833-0400 restoring glydb.c_cluster from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:40:57.311-0400 glydb.c_publication 525MB 2022-04-15T18:40:57.311-0400 glydb.c_site 496MB 2022-04-15T18:40:57.311-0400 glydb.c_protein 95.1MB 2022-04-15T18:40:57.311-0400 glydb.c_cluster 1.21MB 2022-04-15T18:40:57.311-0400 2022-04-15T18:40:59.228-0400 glydb.c_cluster 7.82MB 2022-04-15T18:40:59.228-0400 no indexes to restore 2022-04-15T18:40:59.228-0400 finished restoring glydb.c_cluster (58239 documents) 2022-04-15T18:41:00.312-0400 glydb.c_publication 556MB 2022-04-15T18:41:00.312-0400 glydb.c_site 521MB 2022-04-15T18:41:00.312-0400 glydb.c_protein 111MB 2022-04-15T18:41:00.312-0400 2022-04-15T18:41:01.854-0400 reading metadata for glydb.c_glycan from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:01.885-0400 restoring glydb.c_glycan from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:03.311-0400 glydb.c_publication 587MB 2022-04-15T18:41:03.312-0400 glydb.c_site 576MB 2022-04-15T18:41:03.312-0400 glydb.c_protein 158MB 2022-04-15T18:41:03.312-0400 glydb.c_glycan 43.7MB 2022-04-15T18:41:03.312-0400 2022-04-15T18:41:06.311-0400 glydb.c_publication 631MB 2022-04-15T18:41:06.311-0400 glydb.c_site 624MB 2022-04-15T18:41:06.311-0400 glydb.c_protein 222MB 2022-04-15T18:41:06.311-0400 glydb.c_glycan 79.9MB 2022-04-15T18:41:06.311-0400 2022-04-15T18:41:09.311-0400 glydb.c_publication 670MB 2022-04-15T18:41:09.311-0400 glydb.c_site 688MB 2022-04-15T18:41:09.311-0400 glydb.c_protein 301MB 2022-04-15T18:41:09.311-0400 glydb.c_glycan 128MB 2022-04-15T18:41:09.311-0400 2022-04-15T18:41:12.313-0400 glydb.c_publication 735MB 2022-04-15T18:41:12.313-0400 glydb.c_site 720MB 2022-04-15T18:41:12.313-0400 glydb.c_protein 365MB 2022-04-15T18:41:12.313-0400 glydb.c_glycan 192MB 2022-04-15T18:41:12.313-0400 2022-04-15T18:41:15.311-0400 glydb.c_publication 790MB 2022-04-15T18:41:15.311-0400 glydb.c_site 800MB 2022-04-15T18:41:15.311-0400 glydb.c_protein 397MB 2022-04-15T18:41:15.311-0400 glydb.c_glycan 256MB 2022-04-15T18:41:15.311-0400 2022-04-15T18:41:18.311-0400 glydb.c_publication 846MB 2022-04-15T18:41:18.311-0400 glydb.c_site 874MB 2022-04-15T18:41:18.311-0400 glydb.c_protein 445MB 2022-04-15T18:41:18.311-0400 glydb.c_glycan 288MB 2022-04-15T18:41:18.311-0400 2022-04-15T18:41:21.311-0400 glydb.c_publication 925MB 2022-04-15T18:41:21.312-0400 glydb.c_site 944MB 2022-04-15T18:41:21.312-0400 glydb.c_protein 524MB 2022-04-15T18:41:21.312-0400 glydb.c_glycan 304MB 2022-04-15T18:41:21.312-0400 2022-04-15T18:41:24.312-0400 glydb.c_publication 1005MB 2022-04-15T18:41:24.312-0400 glydb.c_site 995MB 2022-04-15T18:41:24.312-0400 glydb.c_protein 587MB 2022-04-15T18:41:24.312-0400 glydb.c_glycan 336MB 2022-04-15T18:41:24.312-0400 2022-04-15T18:41:27.311-0400 glydb.c_publication 1.04GB 2022-04-15T18:41:27.311-0400 glydb.c_site 1.03GB 2022-04-15T18:41:27.311-0400 glydb.c_protein 651MB 2022-04-15T18:41:27.311-0400 glydb.c_glycan 394MB 2022-04-15T18:41:27.311-0400 2022-04-15T18:41:30.311-0400 glydb.c_publication 1.08GB 2022-04-15T18:41:30.311-0400 glydb.c_site 1.08GB 2022-04-15T18:41:30.311-0400 glydb.c_protein 698MB 2022-04-15T18:41:30.311-0400 glydb.c_glycan 442MB 2022-04-15T18:41:30.311-0400 2022-04-15T18:41:33.312-0400 glydb.c_publication 1.12GB 2022-04-15T18:41:33.312-0400 glydb.c_site 1.14GB 2022-04-15T18:41:33.312-0400 glydb.c_protein 762MB 2022-04-15T18:41:33.312-0400 glydb.c_glycan 506MB 2022-04-15T18:41:33.312-0400 2022-04-15T18:41:34.109-0400 glydb.c_glycan 508MB 2022-04-15T18:41:34.109-0400 no indexes to restore 2022-04-15T18:41:34.109-0400 finished restoring glydb.c_glycan (33755 documents) 2022-04-15T18:41:34.902-0400 reading metadata for glydb.c_network from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:34.932-0400 restoring glydb.c_network from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:36.311-0400 glydb.c_publication 1.20GB 2022-04-15T18:41:36.311-0400 glydb.c_site 1.20GB 2022-04-15T18:41:36.311-0400 glydb.c_protein 793MB 2022-04-15T18:41:36.311-0400 glydb.c_network 40.5MB 2022-04-15T18:41:36.311-0400 2022-04-15T18:41:39.311-0400 glydb.c_publication 1.24GB 2022-04-15T18:41:39.311-0400 glydb.c_site 1.25GB 2022-04-15T18:41:39.311-0400 glydb.c_protein 857MB 2022-04-15T18:41:39.311-0400 glydb.c_network 97.4MB 2022-04-15T18:41:39.311-0400 2022-04-15T18:41:40.896-0400 glydb.c_network 126MB 2022-04-15T18:41:40.896-0400 no indexes to restore 2022-04-15T18:41:40.896-0400 finished restoring glydb.c_network (11334 documents) 2022-04-15T18:41:42.312-0400 glydb.c_publication 1.30GB 2022-04-15T18:41:42.312-0400 glydb.c_site 1.31GB 2022-04-15T18:41:42.312-0400 glydb.c_protein 921MB 2022-04-15T18:41:42.312-0400 2022-04-15T18:41:43.388-0400 reading metadata for glydb.c_disease from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:43.423-0400 restoring glydb.c_disease from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:43.429-0400 glydb.c_publication 1.32GB 2022-04-15T18:41:43.429-0400 no indexes to restore 2022-04-15T18:41:43.429-0400 finished restoring glydb.c_publication (220704 documents) 2022-04-15T18:41:44.003-0400 reading metadata for glydb.c_path from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:44.034-0400 restoring glydb.c_path from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:44.084-0400 no indexes to restore 2022-04-15T18:41:44.084-0400 finished restoring glydb.c_path (754 documents) 2022-04-15T18:41:44.506-0400 no indexes to restore 2022-04-15T18:41:44.506-0400 finished restoring glydb.c_disease (9819 documents) 2022-04-15T18:41:44.740-0400 reading metadata for glydb.c_motif from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:44.770-0400 restoring glydb.c_motif from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:45.082-0400 no indexes to restore 2022-04-15T18:41:45.082-0400 finished restoring glydb.c_motif (120 documents) 2022-04-15T18:41:45.311-0400 glydb.c_site 1.39GB 2022-04-15T18:41:45.312-0400 glydb.c_protein 968MB 2022-04-15T18:41:45.312-0400 2022-04-15T18:41:45.947-0400 reading metadata for glydb.c_species from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:45.981-0400 restoring glydb.c_species from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:46.652-0400 reading metadata for glydb.c_searchinit from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:46.683-0400 restoring glydb.c_searchinit from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:46.708-0400 no indexes to restore 2022-04-15T18:41:46.708-0400 finished restoring glydb.c_species (10 documents) 2022-04-15T18:41:46.926-0400 no indexes to restore 2022-04-15T18:41:46.927-0400 finished restoring glydb.c_searchinit (1 document) 2022-04-15T18:41:47.348-0400 reading metadata for glydb.c_stat from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:47.375-0400 restoring glydb.c_stat from archive '/data/shared/glygen/mongodump/tst/tmpdb' 2022-04-15T18:41:47.577-0400 no indexes to restore 2022-04-15T18:41:47.577-0400 finished restoring glydb.c_stat (1 document) 2022-04-15T18:41:48.312-0400 glydb.c_site 1.47GB 2022-04-15T18:41:48.312-0400 glydb.c_protein 1.02GB 2022-04-15T18:41:48.312-0400 2022-04-15T18:41:51.311-0400 glydb.c_site 1.55GB 2022-04-15T18:41:51.311-0400 glydb.c_protein 1.12GB 2022-04-15T18:41:51.311-0400 2022-04-15T18:41:54.312-0400 glydb.c_site 1.66GB 2022-04-15T18:41:54.312-0400 glydb.c_protein 1.21GB 2022-04-15T18:41:54.312-0400 2022-04-15T18:41:57.311-0400 glydb.c_site 1.75GB 2022-04-15T18:41:57.311-0400 glydb.c_protein 1.32GB 2022-04-15T18:41:57.311-0400 2022-04-15T18:41:59.746-0400 glydb.c_site 1.83GB 2022-04-15T18:41:59.746-0400 no indexes to restore 2022-04-15T18:41:59.746-0400 finished restoring glydb.c_site (388083 documents) 2022-04-15T18:42:00.311-0400 glydb.c_protein 1.44GB 2022-04-15T18:42:03.311-0400 glydb.c_protein 1.67GB 2022-04-15T18:42:06.312-0400 glydb.c_protein 1.69GB 2022-04-15T18:42:09.311-0400 glydb.c_protein 1.93GB 2022-04-15T18:42:12.311-0400 glydb.c_protein 2.15GB 2022-04-15T18:42:15.311-0400 glydb.c_protein 2.42GB 2022-04-15T18:42:18.311-0400 glydb.c_protein 2.72GB 2022-04-15T18:42:21.312-0400 glydb.c_protein 3.01GB 2022-04-15T18:42:24.312-0400 glydb.c_protein 3.29GB 2022-04-15T18:42:27.311-0400 glydb.c_protein 3.56GB 2022-04-15T18:42:30.312-0400 glydb.c_protein 3.84GB 2022-04-15T18:42:31.516-0400 glydb.c_protein 3.95GB 2022-04-15T18:42:31.516-0400 no indexes to restore 2022-04-15T18:42:31.516-0400 finished restoring glydb.c_protein (64197 documents) 2022-04-15T18:42:31.516-0400 done ... data version updated to 1.12.3 on 2022-04-15 18:42:31 EDT-0400 End time stamp ... Fri Apr 15 18:42:32 EDT 2022