ID  LBFHZ3
TS  2026-10-03 23:06:13 EDT-0400
LN  Traceback (most recent call last):
LN    File "/app/glygen/glycan.py", line 90, in post
LN      res_obj = glycan_search(req_obj, config_obj)
LN    File "/app/glygen/glycan_apilib.py", line 271, in glycan_search
LN      hit_dict, hit_stat, tmp_ts_list = get_hit_dict(dbh, sf_dict,field2sec,api_name, config_obj)
LN    File "/app/glygen/glycan_apilib.py", line 915, in get_hit_dict
LN      res = use_indexed_search(api_name_simple, query_obj_new,config_obj,exact_match_flag)
LN    File "/app/glygen/indexlib.py", line 433, in use_indexed_search
LN      res_obj = search_one(api_name, req_obj, config_obj, cache_flag, exact_match_flag)
LN    File "/app/glygen/indexlib.py", line 276, in search_one
LN      query_obj["term"] = query_obj["term"].strip()
LN  AttributeError: 'list' object has no attribute 'strip'
//
ID  SKT911
TS  2026-10-03 17:13:04 EDT-0400
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1184, in _get_socket_no_auth
LN      sock_info = self.sockets.popleft()
LN  IndexError: pop from an empty deque
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1089, in connect
LN      sock = _configured_socket(self.address, self.opts)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 895, in _configured_socket
LN      sock = _create_connection(address, options)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 876, in _create_connection
LN      raise err
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 869, in _create_connection
LN      sock.connect(sa)
LN  OSError: [Errno 99] Cannot assign requested address
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/app/glygen/glycan.py", line 206, in post
LN      res_obj = glycan_detail(req_obj, config_obj)
LN    File "/app/glygen/glycan_apilib.py", line 416, in glycan_detail
LN      history_obj = dbh["c_idtrack"].find_one(q)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/collection.py", line 1273, in find_one
LN      for result in cursor.limit(-1):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 1156, in next
LN      if len(self.__data) or self._refresh():
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 1073, in _refresh
LN      self.__send_message(q)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 955, in __send_message
LN      address=self.__address)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1346, in _run_operation_with_response
LN      exhaust=exhaust)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1458, in _retryable_read
LN      exhaust=exhaust) as (sock_info,
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1282, in _slaveok_for_server
LN      with self._get_socket(server, session, exhaust=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1222, in _get_socket
LN      self.__all_credentials, checkout=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1135, in get_socket
LN      sock_info = self._get_socket_no_auth()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1187, in _get_socket_no_auth
LN      sock_info = self.connect()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1098, in connect
LN      _raise_connection_failure(self.address, error)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 290, in _raise_connection_failure
LN      raise AutoReconnect(msg)
LN  pymongo.errors.AutoReconnect: 10.10.0.6:27017: [Errno 99] Cannot assign requested address
//
ID  J8VRDH
TS  2026-10-03 23:05:31 EDT-0400
LN  Traceback (most recent call last):
LN    File "/app/glygen/protein.py", line 155, in post
LN      res_obj = make_list_objects_indirect(req_obj, config_obj, False)
LN    File "/app/glygen/util.py", line 1068, in make_list_objects_indirect
LN      final_fields, extra_fields = get_final_fields(query_obj, record_type)
LN    File "/app/glygen/util.py", line 1875, in get_final_fields
LN      return final_fields, extra_fields
LN  UnboundLocalError: local variable 'extra_fields' referenced before assignment
//
ID  A8MT10
TS  2026-10-03 17:08:20 EDT-0400
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1184, in _get_socket_no_auth
LN      sock_info = self.sockets.popleft()
LN  IndexError: pop from an empty deque
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1089, in connect
LN      sock = _configured_socket(self.address, self.opts)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 895, in _configured_socket
LN      sock = _create_connection(address, options)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 876, in _create_connection
LN      raise err
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 869, in _create_connection
LN      sock.connect(sa)
LN  OSError: [Errno 99] Cannot assign requested address
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/app/glygen/log.py", line 85, in post
LN      res_obj = log_logging(req_obj, config_obj)
LN    File "/app/glygen/log_apilib.py", line 34, in log_logging
LN      result = dbh[collection].insert_one(query_obj)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/collection.py", line 698, in insert_one
LN      session=session),
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/collection.py", line 612, in _insert
LN      bypass_doc_val, session)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/collection.py", line 600, in _insert_one
LN      acknowledged, _insert_command, session)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1491, in _retryable_write
LN      return self._retry_with_session(retryable, func, s, None)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1377, in _retry_with_session
LN      with self._get_socket(server, session) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1222, in _get_socket
LN      self.__all_credentials, checkout=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1135, in get_socket
LN      sock_info = self._get_socket_no_auth()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1187, in _get_socket_no_auth
LN      sock_info = self.connect()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1098, in connect
LN      _raise_connection_failure(self.address, error)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 290, in _raise_connection_failure
LN      raise AutoReconnect(msg)
LN  pymongo.errors.AutoReconnect: 10.10.0.6:27017: [Errno 99] Cannot assign requested address
//
ID  SIYW00
TS  2026-10-03 22:56:48 EDT-0400
LN  Traceback (most recent call last):
LN    File "/app/glygen/protein.py", line 92, in post
LN      res_obj = protein_search(req_obj, config_obj)
LN    File "/app/glygen/protein_apilib.py", line 187, in protein_search
LN      hit_dict, hit_stat, seen_id, tmp_ts_list,mquery = get_hit_dict(dbh, sf_dict,field2sec,api_name, glygen_name_dict,config_obj)
LN    File "/app/glygen/protein_apilib.py", line 1009, in get_hit_dict
LN      for obj in dbh[coll].find(mongo_query_single,prj_obj):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 1156, in next
LN      if len(self.__data) or self._refresh():
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 1073, in _refresh
LN      self.__send_message(q)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/cursor.py", line 955, in __send_message
LN      address=self.__address)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1346, in _run_operation_with_response
LN      exhaust=exhaust)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1464, in _retryable_read
LN      return func(session, server, sock_info, slave_ok)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1340, in _cmd
LN      unpack_res)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/server.py", line 136, in run_operation_with_response
LN      _check_command_response(first)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/helpers.py", line 159, in _check_command_response
LN      raise OperationFailure(msg % errmsg, code, response)
LN  pymongo.errors.OperationFailure: $regex has to be a string
//
ID  DGXN1D
TS  2026-10-03 17:11:57 EDT-0400
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1184, in _get_socket_no_auth
LN      sock_info = self.sockets.popleft()
LN  IndexError: pop from an empty deque
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1089, in connect
LN      sock = _configured_socket(self.address, self.opts)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 895, in _configured_socket
LN      sock = _create_connection(address, options)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 876, in _create_connection
LN      raise err
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 869, in _create_connection
LN      sock.connect(sa)
LN  OSError: [Errno 99] Cannot assign requested address
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/app/glygen/glycan.py", line 206, in post
LN      res_obj = glycan_detail(req_obj, config_obj)
LN    File "/app/glygen/glycan_apilib.py", line 404, in glycan_detail
LN      error_list = get_errors_in_query("glycan_detail", query_obj, config_obj)
LN    File "/app/glygen/util.py", line 1497, in get_errors_in_query
LN      if coll not in dbh.list_collection_names():
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/database.py", line 856, in list_collection_names
LN      for result in self.list_collections(session=session, **kwargs)]
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/database.py", line 819, in list_collections
LN      _cmd, read_pref, session)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1458, in _retryable_read
LN      exhaust=exhaust) as (sock_info,
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1282, in _slaveok_for_server
LN      with self._get_socket(server, session, exhaust=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1222, in _get_socket
LN      self.__all_credentials, checkout=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1135, in get_socket
LN      sock_info = self._get_socket_no_auth()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1187, in _get_socket_no_auth
LN      sock_info = self.connect()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1098, in connect
LN      _raise_connection_failure(self.address, error)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 290, in _raise_connection_failure
LN      raise AutoReconnect(msg)
LN  pymongo.errors.AutoReconnect: 10.10.0.6:27017: [Errno 99] Cannot assign requested address
//
ID  6ZGMGK
TS  2026-10-03 17:08:20 EDT-0400
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1184, in _get_socket_no_auth
LN      sock_info = self.sockets.popleft()
LN  IndexError: pop from an empty deque
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1089, in connect
LN      sock = _configured_socket(self.address, self.opts)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 895, in _configured_socket
LN      sock = _create_connection(address, options)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 876, in _create_connection
LN      raise err
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 869, in _create_connection
LN      sock.connect(sa)
LN  OSError: [Errno 99] Cannot assign requested address
LN  During handling of the above exception, another exception occurred:
LN  Traceback (most recent call last):
LN    File "/app/glygen/log.py", line 85, in post
LN      res_obj = log_logging(req_obj, config_obj)
LN    File "/app/glygen/log_apilib.py", line 25, in log_logging
LN      error_list = get_errors_in_query("log_logging",query_obj, config_obj)
LN    File "/app/glygen/util.py", line 1497, in get_errors_in_query
LN      if coll not in dbh.list_collection_names():
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/database.py", line 856, in list_collection_names
LN      for result in self.list_collections(session=session, **kwargs)]
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/database.py", line 819, in list_collections
LN      _cmd, read_pref, session)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1458, in _retryable_read
LN      exhaust=exhaust) as (sock_info,
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1282, in _slaveok_for_server
LN      with self._get_socket(server, session, exhaust=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/mongo_client.py", line 1222, in _get_socket
LN      self.__all_credentials, checkout=exhaust) as sock_info:
LN    File "/usr/local/lib/python3.6/contextlib.py", line 81, in __enter__
LN      return next(self.gen)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1135, in get_socket
LN      sock_info = self._get_socket_no_auth()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1187, in _get_socket_no_auth
LN      sock_info = self.connect()
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 1098, in connect
LN      _raise_connection_failure(self.address, error)
LN    File "/usr/local/lib/python3.6/site-packages/pymongo/pool.py", line 290, in _raise_connection_failure
LN      raise AutoReconnect(msg)
LN  pymongo.errors.AutoReconnect: 10.10.0.6:27017: [Errno 99] Cannot assign requested address
//